sodium voltage- type alpha isoform cra_c, snap_masked-scaffold1122_size61463-processed-gene-0.3 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Match: EMLSAG00000010768 (supercontig:LSalAtl2s:LSalAtl2s712:648445:661651:1 gene:EMLSAG00000010768 transcript:EMLSAT00000010768 description:"maker-LSalAtl2s712-snap-gene-6.14") HSP 1 Score: 1437.55 bits (3720), Expect = 0.000e+0 Identity = 751/1173 (64.02%), Postives = 871/1173 (74.25%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVIL------NLFLALLLSSFTDMGGNKAEDHEKDKIQIAFERIGWCFRGGPFSKRNQEEKRKREALA----------NSDDLDDSESMPNKDGYS-------DNYSKQDSIIGNGIDLGFSKGGLS--------DVYEEMGGSYDKTSETIVYNP--TDEVLV-------------------EDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTIC-REIGAPAEWVNSRVTFDN----------VATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVK-VTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
+ S++LA IVFDPFTELFI +CIAVNV FM LD Y+IEY NGGMSPF +S+LT GNYFFT IFA+ESF KL AMSPRYFF++GWN FDF+IVVLS VELLAE +SGLSMLRSFRLLRVFKLAKSWKSLNDILTIM NT GALSNLTFVLCIIIFIFAVMGMQLFG+ Y + VC KW C +PRWNFTDF+HSFMIVFRVLCGEWIES+W V GI F ++ L + +AL ++ D G D + +++ IG G S N + E + N++ +D S+ + + D D IG G+D+ + GLS + E GG + + N D V+V E+CCP YRV P C G+P+ PFWQ+W RHRL S+LIENKYFE +VL LIL+SSFVMTLEDIWF+T+P L+D LYYLDRILT VFF+ET +KLF+MG + YFGNAWCWLDFVIVAVSLINFGASL+G GNIPIFKTMRTLRALRPLRAMAK+EGMKVVVNAL+GALPSIFNVL+VCLIFWLIFAIIG+N MG++YKC+D TG+++SHE+IPN T+C E GA W N+RV FDN VAT+KGW+ +M+DAIDSVE+ QP+RE NI MY +FV FIV GSFFTLNLLVGVIIDKFNEQKNKGGS+LD+FMTEDQ+KYIAAMKKASTKKPLKALPRP WKPQAI+F +ITNK + WTF LDNLNL FIV+FT EMLLKMFALRHHYF+EPWNLFD VVV+LSLAGLFLSD+IEKYFVSPTLLRVVRVAK+GRVLRLIKGA+GIRTLLFSLVMAFPAL+NI LLLFLVMFIF+VFGMSLFKNVKI +GFDD +CTSAGWAEA AI+++ CD P SE G GNCG+ MA V FMI+YL+L+FLII+NMYIAVILENYSQA+EDVQEGITDEDY+LFYE+W+EFDP+GTQYMPYK L EFLD LEPPLQI KPNKFKII MDIPIVRF N D G + E CVFCADILD LTQDFFARKGN I++ P + +VK + TF DRPGY+R+SSS+WKQRE YCA+LIQ+++K+H
Sbjct: 736 KTSQILAFIVFDPFTELFITICIAVNVIFMALDRYDIEYDANGGMSPFLSSVLTQGNYFFTTIFAVESFIKLVAMSPRYFFSEGWNCFDFLIVVLSLVELLAEGVSGLSMLRSFRLLRVFKLAKSWKSLNDILTIMANTFGALSNLTFVLCIIIFIFAVMGMQLFGKDYYDGVCE-KWDCDMPRWNFTDFLHSFMIVFRVLCGEWIESIW---VVKGIVGTVRFFKNGIVRLLRGXGXSRPGDTDIALEVTEEKDFQGENG-DLKNRGLKVEINHIGIPL-GNESSDPNFPDSSIGEGMDITIQGVNGHLNNNKREDXASLCSHGSKALQDFPEDDKLGYSDMSIGRGMDISITGEGLSKEWIGEGEEAVVENGGKMEDVAMNNNNNSYTEDPVIVPNGKSMEEPVYDPVDDVVVEECCPAICYRVCPCCIGDPDSPFWQLWYRHRLQVSRLIENKYFEGVVLTLILLSSFVMTLEDIWFDTRPLLVDMLYYLDRILTVVFFLETLLKLFAMGCVMYFGNAWCWLDFVIVAVSLINFGASLVGLGNIPIFKTMRTLRALRPLRAMAKMEGMKVVVNALVGALPSIFNVLLVCLIFWLIFAIIGINTFMGKFYKCLDEETGEKFSHEIIPNKTVCLNETGAV--WTNARVNFDNVFIAYLALFQVATFKGWMTIMDDAIDSVEKNNQPHREININMYFFFVFFIVFGSFFTLNLLVGVIIDKFNEQKNKGGSSLDAFMTEDQKKYIAAMKKASTKKPLKALPRPNWKPQAIVFSIITNK------------------------NAGWTFALDNLNLSFIVIFTAEMLLKMFALRHHYFAEPWNLFDFVVVMLSLAGLFLSDLIEKYFVSPTLLRVVRVAKVGRVLRLIKGAKGIRTLLFSLVMAFPALVNICLLLFLVMFIFAVFGMSLFKNVKIRSGFDD----------------MCTSAGWAEALDAITDDRECDKPSSETGDAGNCGNYMAGVAFMIIYLILSFLIIVNMYIAVILENYSQANEDVQEGITDEDYDLFYEIWQEFDPDGTQYMPYKSLSEFLDXLEPPLQIAKPNKFKIIHMDIPIVRFTN-DDGSTKEQCVFCADILDALTQDFFARKGNPIEEPPQVNNVKTIGTFKDRPGYQRISSSLWKQREDYCAALIQKAWKFH 1859 HSP 2 Score: 429.098 bits (1102), Expect = 4.169e-124 Identity = 244/436 (55.96%), Postives = 293/436 (67.20%), Query Frame = 0
Query: 12 PTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPL--FSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDF-----HDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQR 439
PTFRPFTREEL II +RI +KK KK+ +R +NI FGD ARAR+ YE+DS+ E E+ P KLEQG+DLPRRYG+FPLE A+ PICDIDPY+RDK++F+V+SKGG I+RFSA NA+F LSP+ HP+ ++ I+ L N +M ++ YV I D TFRVFRALKSVAVIPGLKTIVSAI+YSVKNLRDVI+LT+F L+VFALLGLQIYMGVLSQ CV + + + NMT ++ W +N+S+WY+S ND ++CGN+SGAG CPDG TC++G GPNPNYGYTSFDNFGS+YLCAFRLMTQD+WENLYQITLRTAGPW+IIFF+ NIFLGSFYLINLILAIVAMSYDELQR
Sbjct: 11 PTFRPFTREELAIIHNRIMEKKLAAKKKAERRAKNIAEFGDSARARKLYEQDSESESEDEIEQNP--KLEQGNDLPRRYGEFPLEFASTPICDIDPYFRDKKSFIVISKGGTIFRFSAENAMFLLSPY------------HPIRRIAIHILTHTLFNLVIMAT------------------------------------------------ILVNCYVMIKPDT------ETFRVFRALKSVAVIPGLKTIVSAIIYSVKNLRDVIILTMFALSVFALLGLQIYMGVLSQKCVYTYPSPGSEEFEYWGNMTAE---SFHAWYSNKSSWYLS--NDNYIMCGNASGAGKCPDGTTCMEGFGPNPNYGYTSFDNFGSAYLCAFRLMTQDFWENLYQITLRTAGPWHIIFFMCNIFLGSFYLINLILAIVAMSYDELQR 373 HSP 3 Score: 76.2554 bits (186), Expect = 6.545e-14 Identity = 44/162 (27.16%), Postives = 91/162 (56.17%), Query Frame = 0
Query: 149 VLTHPLFSMFIIFTILLNCYVMIQKDTEYTAST---------EVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTI---LIDLGS---FSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMG 295
++ + F ++ ILL+ +VM +D + + + T ++ E+ +KLFA G V Y +AW WLDF+++A+S + L+ LG+ F +RT R R L+++A + G+K +V+A++ ++ ++ +V+++ + +FA++G+ +MG
Sbjct: 1181 LIENKYFEGVVLTLILLSSFVMTLEDIWFDTRPLLVDMLYYLDRILTVVFFLETLLKLFAMGCV----MYFGNAWCWLDFVIVAVSLINFGASLVGLGNIPIFKTMRTLRALRPLRAMAKMEGMKVVVNALVGALPSIFNVLLVCLIFWLIFAIIGINTFMG 1338 HSP 4 Score: 60.4622 bits (145), Expect = 3.994e-9 Identity = 46/181 (25.41%), Postives = 87/181 (48.07%), Query Frame = 0
Query: 889 VWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLE--DIWFETK----PFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCI 1063
+W + I + ++ + + E + + I V+ M L+ DI ++ PFL L + T +F +E+ IKL +M +F W DF+IV +SL+ A G + + ++ R LR + ++ L + ++ GAL ++ V+C+I + IFA++G+ YY +
Sbjct: 733 LWIKTSQILAFIVFDPFTELFITICIAVNVIFMALDRYDIEYDANGGMSPFLSSVLTQGNYFFTTIFAVESFIKLVAMSPRYFFSEGWNCFDFLIVVLSLVELLAE--GVSGLSMLRSFRLLRVFKLAKSWKSLNDILTIMANTFGALSNL--TFVLCIIIF-IFAVMGMQLFGKDYYDGV 908 HSP 5 Score: 57.7658 bits (138), Expect = 3.065e-8 Identity = 46/182 (25.27%), Postives = 83/182 (45.60%), Query Frame = 0
Query: 144 RIALLVLTHPLFSMFIIFTILLNCYVMI--QKDTEYTASTEV-------------VFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILID-LGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNV 309
+I ++ P +FI I +N M + D EY A+ + FT I+ ES IKL A + + + WN DFL++ +S V +L + + S LR+FR+ R K L I++ + + L ++ + ++ +FA++G+Q++ KD++D V
Sbjct: 739 QILAFIVFDPFTELFITICIAVNVIFMALDRYDIEYDANGGMSPFLSSVLTQGNYFFTTIFAVESFIKLVAMSPRY----FFSEGWNCFDFLIVVLSLVELLAEGVSGLSMLRSFRLLRVFKLAKSWKSLNDILTIMANTFGALSNLTFVLCIIIFIFAVMGMQLFG--------KDYYDGV 908
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Match: EMLSAG00000009714 (supercontig:LSalAtl2s:LSalAtl2s627:140867:158129:1 gene:EMLSAG00000009714 transcript:EMLSAT00000009714 description:"maker-LSalAtl2s627-snap-gene-1.23") HSP 1 Score: 1119.38 bits (2894), Expect = 0.000e+0 Identity = 601/892 (67.38%), Postives = 688/892 (77.13%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGN-KAEDHEKDKIQIAFERIGWCFRGGPFSKRNQEEK---RKREALANSDDLDDSESMPNKDGYSDNYSKQDSIIG-NGIDLGFSKGGLSDVYEEMGGSYDKTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDD 1377
+ SEVLA+IVFDPF +L I LCI VNV FM DHYNIEY NGGMS +LL NGNYFFT IFA ESF KL AMSPRYFF DGWN FDF+IV+LS VELLA ++GLSMLRSFRLLRVFKLAKSWKSLNDI+TIM NT+GALSNLT VLCIIIFIFAVMGMQLFG Y+EK C KWKC LPRWNFTDF+HSFMIVFRVLCGEWIESMW CM+VAG TCVPYFLATVL+ANLVILNLFLALLLSSF+DMGG+ + ED + DK+ IA R F F+KR +E+ R +A+S +P +G ++ I G N + D + K E I Y+P + + VEDCCP FVYR++P G+ PFW+ W++ RL+ +LIEN+YFE +VL LIL+SSFVMTLEDIWFET+P LID LYYLDRILT VFF+ET++KLF+MG + YF NAWCWLDFVIVA SLINF ASL+GA NIPIFKTMRTLRALRPLRAM+K+EGMKVVVNALIGALPSIFNVL+VC++FWLIFAIIGVN MG ++KCIDS G ++SHE+IPN T+C A+W+NS+VTFDNV ATWKGWI +M+DAIDSV +QPYRE +I MY YFV FI+LGSFFTLNLLVGVIIDKFNEQKNKGGS+LD+FMTEDQ+KYIAAMKKAS KKPLKALPRP+WKPQAI+FG++TNKKFDMI+MGFIGLNMLTMM DHY Q+ WTFVLDNLN+FFI++FT EMLLK+FALR +YFSEPWNLFD +VLLSL GLFL A+GIRTLLFSLVMA PAL NI LLLFLVMFIF+VFGMSLFKNVKI GFDD
Sbjct: 612 RFSEVLAVIVFDPFVDLSITLCIVVNVLFMMFDHYNIEYDANGGMSMEMNNLLKNGNYFFTTIFAFESFMKLMAMSPRYFFADGWNCFDFLIVILSLVELLAXGVNGLSMLRSFRLLRVFKLAKSWKSLNDIMTIMANTLGALSNLTVVLCIIIFIFAVMGMQLFGSFYIEKACE-KWKCELPRWNFTDFLHSFMIVFRVLCGEWIESMWACMYVAGPTCVPYFLATVLVANLVILNLFLALLLSSFSDMGGSGEEEDGKPDKMSIAVNRFKRLFS---FTKRKIKEELFDRIXRKIAHSKS---KPLIPEANGNGFSHKTNGYIGGHNNVPSETQTYIPIDQQSDKFAPQTKDHEEIYYDPLETLEVEDCCPPFVYRIIPL--GDQHSPFWEAWTQQRLMAMRLIENEYFEGVVLGLILLSSFVMTLEDIWFETRPVLIDCLYYLDRILTVVFFLETTLKLFAMGPVMYFTNAWCWLDFVIVAXSLINFIASLVGAVNIPIFKTMRTLRALRPLRAMSKMEGMKVVVNALIGALPSIFNVLLVCIVFWLIFAIIGVNLFMGTFHKCIDSIXGHKFSHEIIPNKTVCLN-QTNAQWINSKVTFDNVIMAYLALLQVATWKGWITIMDDAIDSVAINKQPYREASIGMYFYFVAFIILGSFFTLNLLVGVIIDKFNEQKNKGGSSLDAFMTEDQKKYIAAMKKASKKKPLKALPRPYWKPQAIVFGIVTNKKFDMIIMGFIGLNMLTMMMDHYQQTEGWTFVLDNLNVFFIMIFTLEMLLKIFALRQYYFSEPWNLFDFFIVLLSLGGLFLR------------------------------AKGIRTLLFSLVMALPALGNICLLLFLVMFIFAVFGMSLFKNVKIIPGFDD 1463 HSP 2 Score: 580.096 bits (1494), Expect = 2.547e-179 Identity = 311/497 (62.58%), Postives = 384/497 (77.26%), Query Frame = 0
Query: 4 WEFEAEAPPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIE-PSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLN--WDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETD 496
+E E + PTFRPFTRE+ + IE+RI +KK +KKR+ KR++NIK FGDGARAR+ Y +DSD +++ + P+ ++EQG+DLPRRYG+FPLEL+N PICDIDP+Y D+RTFMV++K G+I RFSA ALFFL+PFHPIRRIA+ VLTHPLF+ II TIL+NC VM+ DTEY +++E++FT+IYTYESA+KL ARG + FTYLRD WNWLDF VI MSY+TI IDLGSFS+LRTFRVFRALKSVA +PGLKTIV AI+YSVKNL DV +LT+F LA+FALLGLQ+YMGVL+Q C+ + D +L N NG ++ + W N SN YVS + + ++CGNSSGAG CP+G CL G NPN+GYT+FDNFG +YLCAFRLMTQDYWENLYQITLRTAGPWNI+FFI NIF+GSFYLINLILAIVAMSYDELQR+ EE + E+ A EAE EA+ +S ++FS G DN F+ D
Sbjct: 17 YEIETGSIPTFRPFTREDYEKIENRIFEKKLIQKKRDEKRRKNIKEFGDGARARKQYNQDSDEDDDPESVPPIPNKRIEQGNDLPRRYGEFPLELSNTPICDIDPFYADQRTFMVIAKNGSITRFSAEPALFFLTPFHPIRRIAIRVLTHPLFNFIIICTILVNCIVMMLPDTEYXSASEIIFTSIYTYESAVKLLARGFILHNFTYLRDPWNWLDFAVIGMSYITIAIDLGSFSSLRTFRVFRALKSVAXVPGLKTIVGAIIYSVKNLFDVTILTLFGLALFALLGLQLYMGVLTQRCIYEIPDELLEMN---NGSVHSVYKSWYINSSNLYVSEVTNDYIMCGNSSGAGKCPEGTVCLAGFAQNPNHGYTTFDNFGYAYLCAFRLMTQDYWENLYQITLRTAGPWNILFFILNIFMGSFYLINLILAIVAMSYDELQRELEELEALKAAEI--------AVFKEAE----EALGDVSKVNFSSSSGVDNPSFKFD 498 HSP 3 Score: 194.512 bits (493), Expect = 4.953e-50 Identity = 89/126 (70.63%), Postives = 103/126 (81.75%), Query Frame = 0
Query: 1484 EFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
EFDP G+QY+ ++ L EFLDVLEPPLQI PNKFKII MDIPIVRF PD G+ ED VFC+DILD +TQDFFARKG+ DDSPH+E VKVT+F DRPGYER SSS KQRE+YC SLI++S+K H
Sbjct: 1464 EFDPSGSQYISFRHLSEFLDVLEPPLQIPMPNKFKIINMDIPIVRFNPPDGGEVREDSVFCSDILDAVTQDFFARKGSGRDDSPHVEDVKVTSFGDRPGYERTSSSWTKQRENYCGSLIKKSWKMH 1589 HSP 4 Score: 124.02 bits (310), Expect = 1.863e-28 Identity = 125/548 (22.81%), Postives = 239/548 (43.61%), Query Frame = 0
Query: 143 RRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTAST---------EVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTIL------IDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITL----------RTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLF 665
R +A+ ++ + F ++ ILL+ +VM +D + + + T ++ E+ +KLFA G V Y +AW WLDF+++A S + + +++ F +RT R R L++++ + G+K +V+A++ ++ ++ +V+++ I +FA++G+ ++MG + C+ + + N + ++ + W IN K+ +FDN +YL ++ T W + + R A +F+ I LGSF+ +NL++ ++ ++ E+ K L+A ++ A A++ +L + + V I+ F ++ I+ I +N+ M +DHY + +T +L N N FF IF LE K+ A+ +Y+F++ WN+FDF IV+LS + GL LR+ K + +L + + AL N+ +L +++FIFAV GM LF
Sbjct: 1001 RLMAMRLIENEYFEGVVLGLILLSSFVMTLEDIWFETRPVLIDCLYYLDRILTVVFFLETTLKLFAMGPV----MYFTNAWCWLDFVIVAXSLINFIASLVGAVNIPIFKTMRTLRALRPLRAMSKMEGMKVVVNALIGALPSIFNVLLVCIVFWLIFAIIGVNLFMGTFHK-CIDSIXGHKFSHEIIPNKTVCLNQ---TNAQW----INSKV------------------------------TFDNVIMAYLALLQVATWKGWITIMDDAIDSVAINKQPYREASIGMYFYFVAFIILGSFFTLNLLVGVIIDKFN-------EQKNKGGSSLDAFMTEDQKKYIAAMKKASKKKPLKAL---------------PRPYWKPQAIVFGIVTNKKF-DMIIMGFIGLNMLTMMMDHYQ--------QTEGWTFVLDNLNVFFIMIFTLEMLLKIFALR-QYYFSEPWNLFDFFIVLLS--------LGGL-FLRA-------------KGIRTLLFSLVMALPALGNICLLLFLVMFIFAVFGMSLF 1452 HSP 5 Score: 70.4774 bits (171), Expect = 3.478e-12 Identity = 73/305 (23.93%), Postives = 134/305 (43.93%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMG-----------------------RYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRV--------------TFDNV--ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVI 1155
R I +++ + F I++ ILV+ VM L D + + + I T ++ E+++KL + GFI Y + W WLDF ++ +S I L G+ F ++RT R R L+++A + G+K +V A+I ++ ++F+V ++ L +FA++G+ MG YK N+ Y EV + +C + V TFDN A + + D +++ Q R + ++F+L I +GSF+ +NL++ ++
Sbjct: 157 RRIAIRVLTHPLFNFIIICTILVNCIVMMLPDTEYXSAS---------EIIFTSIYTYESAVKLLARGFILHNFTYLRDPWNWLDFAVIGMSYITIAIDL-GS-----FSSLRTFRVFRALKSVAXVPGLKTIVGAIIYSVKNLFDVTILTLFGLALFALLGLQLYMGVLTQRCIYEIPDELLEMNNGSVHSVYKSWYINSSNLYVSEVTNDYIMCGNSSGAGKCPEGTVCLAGFAQNPNHGYTTFDNFGYAYLCAFRLMTQDYWENLY--QITLRTAGPWNILFFILNIFMGSFYLINLILAIV 444 HSP 6 Score: 65.4698 bits (158), Expect = 1.211e-10 Identity = 60/248 (24.19%), Postives = 111/248 (44.76%), Query Frame = 0
Query: 1218 DMIVMGFIGLNMLTMMCDHYD--------QSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYF-SEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVH------NFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINM 1450
D+ + I +N+L MM DHY+ S+ +L N N FF +F E +K+ A+ YF ++ WN FD ++V+LSL L + L ++R ++ RV +L K + + ++ + AL N+ ++L +++FIF+V GM LF + I + NF F +F ++F++ W + + P V + + +++ L+I+N+
Sbjct: 627 DLSITLCIVVNVLFMMFDHYNIEYDANGGMSMEMNNLLKNGNYFFTTIFAFESFMKLMAMSPRYFFADGWNCFDFLIVILSLVELLAXGV--------NGLSMLRSFRLLRVFKLAKSWKSLNDIMTIMANTLGALSNLTVVLCIIIFIFAVMGMQLFGSFYIEKACEKWKCELPRWNFTDFLHSFMIVFRVLCGEWIESMWACMY-----------VAGP-------TCVPYFLATVLVANLVILNL 848 HSP 7 Score: 60.077 bits (144), Expect = 5.709e-9 Identity = 46/170 (27.06%), Postives = 83/170 (48.82%), Query Frame = 0
Query: 126 RFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYV-MIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTIL-IDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIY 293
RFS A+ PF + I L ++ + LF MF + I + M + + FT I+ +ES +KL A + + D WN DFL++ +S V +L + S LR+FR+ R K L I++ + ++ L ++ V+ ++ +FA++G+Q++
Sbjct: 612 RFSEVLAVIVFDPFVDLS-ITLCIVVNVLFMMFDHYNIEYDANGGMSMEMNNLLKNGNYFFTTIFAFESFMKLMAMSPRY----FFADGWNCFDFLIVILSLVELLAXGVNGLSMLRSFRLLRVFKLAKSWKSLNDIMTIMANTLGALSNLTVVLCIIIFIFAVMGMQLF 776
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Match: EMLSAG00000006480 (supercontig:LSalAtl2s:LSalAtl2s354:213665:368876:-1 gene:EMLSAG00000006480 transcript:EMLSAT00000006480 description:"maker-LSalAtl2s354-snap-gene-2.25") HSP 1 Score: 395.586 bits (1015), Expect = 4.878e-113 Identity = 219/433 (50.58%), Postives = 276/433 (63.74%), Query Frame = 0
Query: 12 PTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLP-RRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTN--GDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQ 440
P F PFTRE + IE+RI + + K++ + KR E R ++D I P LE G LP R +FP EL PI G I+RF+A +AL+ LSPF P+RR+A+ +L HP FS+FII TILLNC +MI+ E S+EV+FTAIYT+ESA K+ RG + F+YLRDAWNWLDF+VI ++Y+T+ IDLG+ + LRTFRV RALK+VA+IPGLKTIV A++ SVKNLRDVI+LT+F L+VFALLGLQIYMGVL+Q C+ DF + + N + W+++ N SNWY VLCGNSSGAG CPD +TCL+G G NPNY YTSFD FG ++L AFRLMTQD WE+LYQ SFYL+NLILAIVAMSYDELQ++
Sbjct: 11 PIFVPFTRESIAKIEARILEDNEKKRELQQKRAEG------EVRYDDDDDDDGPI---------PDPTLEAGMPLPIRMAAEFPPELVATPI------------------GRDIFRFNAEDALYVLSPFSPVRRVAIHILVHPFFSVFIITTILLNCLMMIKTSNERIESSEVIFTAIYTFESATKVMGRGFILCPFSYLRDAWNWLDFIVITLAYITMGIDLGNLAVLRTFRVLRALKTVAIIPGLKTIVGAVIESVKNLRDVIILTVFSLSVFALLGLQIYMGVLTQKCIHDFPWSSIPPEERGNYSSHIAWNKFNLNSSNWYWIEGRIDPVLCGNSSGAGECPDNYTCLQGFGRNPNYDYTSFDTFGWAFLSAFRLMTQDLWEDLYQ--------------------SSFYLVNLILAIVAMSYDELQKK 390 HSP 2 Score: 386.726 bits (992), Expect = 3.720e-110 Identity = 214/378 (56.61%), Postives = 254/378 (67.20%), Query Frame = 0
Query: 1062 CIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSN 1429
C D+ G R + P+ C + WVNS FDNV A +KGW V+ DA+DS GQQP RE N+YMY YFV FI+ GSFFTLNL +GVIID FNEQK K +L+ FMT+DQ+KY AAMKK KKP WKPQA++FG++TNKKFDMI+M FIGLNMLTM DHY QS W+F LDNLN+ FIV+FTTE +LK+FALR +YF + LSD+IEKYFVSPTLLRVVRVAKIGRVLRL+KGARGIRTLLF+L M+ PAL NI LLL LVMFIF++FGMS F NVK G DDV+NF+TF K+ LLFQ+ TSAGW I NE++C+ + E G G N
Sbjct: 1466 CEDAE-GNRLNASYTPDKETC--LLENQYWVNSVHNFDNVGSAYLSLFQVAIFKGWTGVLYDALDSSGIGQQPIREVNLYMYWYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKIRGSLEMFMTDDQKKYYAAMKKMGNKKP--------WKPQAVVFGIVTNKKFDMIIMIFIGLNMLTMTLDHYGQSEMWSFALDNLNIGFIVIFTTECVLKIFALRLYYFR-----------------IVLSDLIEKYFVSPTLLRVVRVAKIGRVLRLVKGARGIRTLLFALAMSMPALFNICLLLTLVMFIFAIFGMSFFMNVKKRGGLDDVYNFETFGKSMILLFQMSTSAGWDGVLNGIINEEDCEIENEETGVAGKTNGN 1815 HSP 3 Score: 314.694 bits (805), Expect = 3.902e-87 Identity = 190/356 (53.37%), Postives = 235/356 (66.01%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLL-----SSFTDMGGNKAEDHEKDKIQIAFER----------------------IGWCFRGGPFSKRNQEEKRKREALANSDDLDDSESMPNKDGYSDNYSKQDSIIGNGIDLG 829
+++E L+ I+FDPF +LFI LCI VN FM LDH HD M P L NGNYFFTA FA+ES KL AMSP+Y+F +GWNIFDF+IV LS +EL N+SGL++LR+FRLLRVFKLAKSW +LN +++IMG T+GAL NLT VLCIIIFIFAVMGMQLFG+SYV+ + K LPRWNF DFMHSFMIVFRVLCGEWIESMWDCM++A CVP+FLATV+I NLV+LNLFLALLL S+ + GGN D + +K+ AF R I CFR F+ R + R+ A S +++ KD + +Y D IG+G+D+
Sbjct: 700 KLTEYLSFIIFDPFVDLFITLCILVNTFFMGLDH-----HD---MDPDIHKTLQNGNYFFTATFAIESCXKLMAMSPKYYFLEGWNIFDFIIVSLSLIELGLVNVSGLTVLRTFRLLRVFKLAKSWPTLNLLISIMGKTVGALGNLTLVLCIIIFIFAVMGMQLFGKSYVDNIDRFPNKS-LPRWNFVDFMHSFMIVFRVLCGEWIESMWDCMWIASKVCVPFFLATVVIGNLVVLNLFLALLLSSFGASNLSAAGGN---DEDTNKLSEAFNRLRRLRVFLQKLISRGLKYVKDKIILCFR-QIFNARREALMRQNRA---STEINQEHRTLKKDQHIVSY---DVKIGDGMDIA 1036 HSP 4 Score: 302.368 bits (773), Expect = 2.886e-83 Identity = 154/323 (47.68%), Postives = 204/323 (63.16%), Query Frame = 0
Query: 846 YDKTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIV-----------------------------------------AVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDN----------VATWKGWIDVMNDAIDS 1117
+D T++ I+ + +CCP+ Y +PF G+P+ PFWQ W R+ +LIENKYFE+ V+V+IL+SS + LED++ ++P L D LYY+DRI T +FF+E +K ++GF+KYF NAW WLDFV V VSLINF ASLLGAG I FKTMRTLRALRPLRAM++++GM+ VVNAL+ A+PSIFNVL+VCLIFWLIFAI+GV G+YYKC+D TG++ S E++P++ C EWVNSR+TFD+ VAT+KGW+ +MNDAIDS
Sbjct: 1146 FDATAQEILMHEYPS----ECCPDKFYLRLPFLAGDPDSPFWQGWGNLRIKTFRLIENKYFETAVIVMILISSLALALEDVYLPSRPVLQDVLYYMDRIFTVIFFLEMCVKWLALGFVKYFTNAWXWLDFVXVMFSILNLVASFFGVGNIPIFKTIRTLRGLRPLRALSRIGGMKVSLINFTASLLGAGGIQAFKTMRTLRALRPLRAMSRMQGMRXVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQMFAGKYYKCVDIVTGEKISAEIVPDVVTCLAENN-TEWVNSRITFDHVGHAYISLFQVATFKGWLPIMNDAIDS 1463 HSP 5 Score: 112.849 bits (281), Expect = 4.956e-25 Identity = 123/566 (21.73%), Postives = 226/566 (39.93%), Query Frame = 0
Query: 184 VFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILID-----------------------------------------------LGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQ---ICVKDFHDNVLFQNMTTNGDLNWDRWVNNE------SNWYVS-----------PINDKLVLC-------GNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWEN-LY---------QITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLF 665
+FT I+ E +K A G V Y +AW WLDF+ + S + ++ + +F +RT R R L++++ + G++ +V+A++ ++ ++ +V+++ + +FA++G+Q++ G + I + + ++ T N WVN+ + Y+S PI + + GN A PD TCL +FDN GS+YL F++ W LY Q +R + +F+F I GSF+ +NL + ++ +++E +++ M + + A M + +AV + G NK F ++ I++ I +N+ MTLDHY G S ++ L N N F IF E K+ A+ Y F IV+ +E + + L ++R ++ RV +L K + + +L + ++ AL N+ +L +++FIFA+ GM F
Sbjct: 1240 IFTVIFFLEMCVKWLALGFV----KYFTNAWXWLDFVXVMFSILNLVASFFGVGNIPIFKTIRTLRGLRPLRALSRIGGMKVSLINFTASLLGAGGIQAFKTMRTLRALRPLRAMSRMQGMRXVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQMFAGKYYKCVDIVTGEKISAEIVPDVVTCLAENNTEWVNSRITFDHVGHAYISLFQVATFKGWLPIMNDAIDSRDCEDAEGNRLNASYTPDKETCLLENQYWVNSVHNFDNVGSAYLSLFQVAIFKGWTGVLYDALDSSGIGQQPIREVNLYMYWYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKIRGSLEMFMTDDQKKYYAAMKKMGNKKPWKPQAV---------VFGIVTNKKF----------------------DMIIMIFIGLNMLTMTLDHY--------GQSEMWSFALDNLNIGFIVIFTTECVLKIFALRLYY----------FRIVLSDLIEKYFVSPTLLRVVRVAKIGRVLRLVKGARGIRTLLFALAMSMPALFNICLLLTLVMFIFAIFGMSFF 1752 HSP 6 Score: 74.7146 bits (182), Expect = 1.990e-13 Identity = 60/204 (29.41%), Postives = 95/204 (46.57%), Query Frame = 0
Query: 1218 DMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALR-HHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVH----------NFQTFTKTFTLLFQICTS----AGWAEAWLA 1406
D+ + I +N M DH+D L N N FF F E K+ A+ +YF E WN+FD ++V LSL IE V+ + L V+R ++ RV +L K + L+ + AL N+ L+L +++FIF+V GM LF + D++ NF F +F ++F++ + W W+A
Sbjct: 715 DLFITLCILVNTFFMGLDHHDMDPDIHKTLQNGNYFFTATFAIESCXKLMAMSPKYYFLEGWNIFDFIIVSLSL--------IELGLVNVSGLTVLRTFRLLRVFKLAKSWPTLNLLISIMGKTVGALGNLTLVLCIIIFIFAVMGMQLFGKSYV----DNIDRFPNKSLPRWNFVDFMHSFMIVFRVLCGEWIESMWDCMWIA 906 HSP 7 Score: 72.4034 bits (176), Expect = 1.056e-12 Identity = 40/125 (32.00%), Postives = 73/125 (58.40%), Query Frame = 0
Query: 944 ILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRY-YKCI 1063
I T ++ E++ K+ GFI Y +AW WLDF+++ ++ I G L GN+ + +RT R LR L+ +A + G+K +V A+I ++ ++ +V+++ + +FA++G+ MG KCI
Sbjct: 151 IFTAIYTFESATKVMGRGFILCPFSYLRDAWNWLDFIVITLAYITMGIDL---GNLAV---LRTFRVLRALKTVAIIPGLKTIVGAVIESVKNLRDVIILTVFSLSVFALLGLQIYMGVLTQKCI 269 HSP 8 Score: 65.4698 bits (158), Expect = 1.320e-10 Identity = 50/180 (27.78%), Postives = 90/180 (50.00%), Query Frame = 0
Query: 898 SQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIP 1077
S +I + + + + + ILV++F M L+ + P + L + T F IE+ KL +M YF W DF+IV++SLI G L+ + + +T R LR + ++ L + ++ +GAL ++ LV+C+I + IFA++G+ Y ID R+ ++ +P
Sbjct: 706 SFIIFDPFVDLFITLCILVNTFFMGLDH--HDMDPDIHKTLQNGNYFFTATFAIESCXKLMAMSPKYYFLEGWNIFDFIIVSLSLIELG--LVNVSGLTVLRTFRLLRVFKLAKSWPTLNLLISIMGKTVGALGNL--TLVLCIIIF-IFAVMGMQLFGKSYVDNID-----RFPNKSLP 873 HSP 9 Score: 65.0846 bits (157), Expect = 1.671e-10 Identity = 52/199 (26.13%), Postives = 91/199 (45.73%), Query Frame = 0
Query: 500 SQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIF---IFAVMGMQLFGQSYVEKVCNP-KWKCVLP--RWNFT 688
S V V I+ PF +FII I +N M + + FTAI+ ES K+ + P + D WN DF+++ L+++ + ++ L++LR+FR+LR K L TI+G I ++ NL V+ + +F +FA++G+Q++ +K + W + P R N++
Sbjct: 107 SPVRRVAIHILVHPFFSVFIITTILLNCLMMIKTS---------------NERIESSEVIFTAIYTFESATKVMGRGFILCPFSYLRDAWNWLDFIVITLAYITM-GIDLGNLAVLRTFRVLRALKTVAIIPGLK---TIVGAVIESVKNLRDVIILTVFSLSVFALLGLQIYMGVLTQKCIHDFPWSSIPPEERGNYS 286 HSP 10 Score: 64.3142 bits (155), Expect = 2.913e-10 Identity = 40/153 (26.14%), Postives = 78/153 (50.98%), Query Frame = 0
Query: 149 VLTHPLFSMFIIFTILLNCYVM------IQKDTEYT-ASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTI-LIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIY 293
++ P +FI IL+N + M + D T + FTA + ES KL A + Y + WN DF+++++S + + L+++ + LRTFR+ R K P L ++S + +V L ++ ++ ++ +FA++G+Q++
Sbjct: 708 IIFDPFVDLFITLCILVNTFFMGLDHHDMDPDIHKTLQNGNYFFTATFAIESCXKLMAMSPKY----YFLEGWNIFDFIIVSLSLIELGLVNVSGLTVLRTFRLLRVFKLAKSWPTLNLLISIMGKTVGALGNLTLVLCIIIFIFAVMGMQLF 856
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Match: EMLSAG00000010843 (supercontig:LSalAtl2s:LSalAtl2s721:13130:108134:1 gene:EMLSAG00000010843 transcript:EMLSAT00000010843 description:"maker-LSalAtl2s721-augustus-gene-1.27") HSP 1 Score: 268.855 bits (686), Expect = 1.125e-72 Identity = 206/691 (29.81%), Postives = 365/691 (52.82%), Query Frame = 0
Query: 872 YRVMPFCQGNPEEPFWQVW---SRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWC-----WLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSN--TGQ--RYSHEVIPNMTICREIGAPAEWVNSRVTFDN----------VATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSF-MTEDQRKYIAAMKKASTKKPLKA-LPRPFWKP-QAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALR-HHYFSEPWNLFDLVVVLLSLAGLFLSDIIE-KYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTG--FDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDN--CDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRK--PNKF---KIIQMDIPI 1526
Y+V+P P+E + ++ ++ R++ + + YF +IVLV I+VSS ++ ED + L Y D T +F IE +K+ S GF+ + G A+C LD ++VAVSLI+F + +G I + K +R LR LRPLRA+ + +G+K VV +I A +I N+++V L+ +FA+IGV G+++ C D + T + R V + + + I W + +DN V+T++GW ++ +IDS P + +++ ++I++ +FF +N+ VG +I F +N+G S + + ++QR I + A KP++ +P+ P Q ++ +T+ F+ + I +N L++ Y Q T+T LD LN+ F V FT E + K+ A R +YF +PWN FD ++VL SL + ++++ +S R+ RV R+++L+ GIRTLL++ +F AL +A+L+ L+ FI+ V GM +F + G + +NFQTF + +LF+ T W E L+ + CD + G+PG CG++ A F+ ++V +FL I+N+++AVI++N+ + D + + F +W E+DP+ + + + L + PPL K P++ +++ M++P+
Sbjct: 1005 YKVVPI----PQESAFYIFPPNNQFRILCHFICNHSYFGNIVLVCIMVSSAMLAAEDP-LNSNSERNKILNYFDYFFTTIFTIEVCLKVISYGFLLHPG-AFCRSGFNLLDLLVVAVSLISF---IFSSGAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAXKTIGNIVLVTLLLQFMFAVIGVQLFKGKFFMCSDKSKMTAETCRGKFIVYKDGDLNQPIVEERIWERNDFHYDNVGKGLLTLFVVSTFEGWPGILYVSIDSNAEDVGPIHNYRPIVAVFYFIYIIIIAFFMVNIFVGFVIVTF---QNEGESAYKNCELDKNQRNCI---EFALNAKPVRRYIPK---NPIQYKLWAFVTSPVFEYTIFAMILINTLSLAMKFYQQPQTYTAFLDVLNVIFTVFFTLEFVFKLGAFRFKNYFGDPWNSFDFIIVLGSLIDIAMAELNPGNNMISINFFRLFRVM---RLVKLLSKGEGIRTLLWTFFKSFQALPWVAILIGLIFFIYGVVGMQVFGKIAPQEGSNINRNNNFQTFLQALLVLFRSATGEAWQEIMLSCRKHPDVICDERSEDRGNPGGCGTDFAYPYFISFFVVCSFL-ILNLFVAVIMDNFDYLTRD-WSILGPHHLDEFVRLWSEYDPDAKGRIKHVDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPL 1672 HSP 2 Score: 97.8265 bits (242), Expect = 2.237e-20 Identity = 131/624 (20.99%), Postives = 240/624 (38.46%), Query Frame = 0
Query: 143 RRIALLVLTHPLFSMFIIFTILLNCYVMIQKD-------TEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYV-------TILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTT--NGDLNWDRWVNNESNWYVSPINDKLVLCG------------NSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNII------FFIFNIFLGSFYLINLILAIVA---MSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHL----SLLDFSLLGG-------------------KDNKGFETDSFQS-----QVSEVLAIIVFDPFTEL---------------FIILCIAVNVAFMTL-DHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELL--AENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWK 679
RR+ ++ II + LN V+ + ++ T + F ++T+E +K+++ G Y +N D V+ S + I+ LG S LR R+ R K + +V +++ S+ ++ ++V+ + +F+LLG+QI+ G ++ H + Q+ T G + +R+ N S IN + G V + K +Y +FD+F S L F+++T + W + ++ G N I +FI G++ L+N+ LAI D L+ +AE+E E ++ + E L SL D+ D DS + + A +F P + +++CI V+ A + D N N ++ F +YFFT IF +E K+ + + P F G+N+ D ++V +S + + + IS + +LR R+LR + K L ++ + + N+ V ++ F+FAV+G+QLF + +C+ K K
Sbjct: 591 RRVCRKIVKSXAMFWIIIILVFLNTCVLATEHYKQPIWLDDFQEFTNLFFVVLFTFEMFLKMYSLGFQ----GYFVSLFNRFDCFVVISSILELILTNENIMPPLG-LSVLRCVRLLRTFKVTRYWSSMGNLVKSLVNSIASINSLLVILFLFIFIFSLLGMQIFGGKFTKSLESRSHFDTFPQSCLTVFQGFEDSERYWKRLQNLLGSLINSIXAIVSLLVLLFLFLGIFALLGTQVFGGKYVQSKSSGKNHYSRANFDSFSQSLLSVFQILTGEDWNVVMYDGIQAFGGVNSIGIVSSLYFIILFICGNYILLNVFLAIAVDNLADADALEDEAEKEEGAGPPEDGGVEGVDILGANSHCGGDTELRLSLDQEYSLEDYDQYAEDDEIVGDDDDEEDEGQFELDDKNTLRMDSESPFYKVVPIPQESAFYIFPPNNQFRILCHFICNHSYFGNIVLVCIMVSSAMLAAEDPLNSNSERNKILNYF--------DYFFTTIFTIEVCLKVISYGFLLHPGAFCRSGFNLLDLLVVAVSLISFIFSSGAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAXKTIGNIVLVTLLLQFMFAVIGVQLFKGKFF--MCSDKSK 1199 HSP 3 Score: 96.2857 bits (238), Expect = 6.358e-20 Identity = 72/263 (27.38%), Postives = 122/263 (46.39%), Query Frame = 0
Query: 510 VFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVEL-LAE-----NISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFVAGITC------------------VPYFLATVLIANLVILNLFLALLLSSF 747
V P E I I +N + + Y +T+ L N FT F LE KL A + +F D WN FDF+IV+ S +++ +AE N+ ++ R FR++R+ KL + + +L + AL + ++ +I FI+ V+GMQ+FG K+ + + NF F+ + +++FR GE W E M C + C PYF++ ++ + +ILNLF+A+++ +F
Sbjct: 1352 VTSPVFEYTIFAMILINTLSLAMKFYQ--------QPQTYTAFLDVLNVIFTVFFTLEFVFKLGAFRFKNYFGDPWNSFDFIIVLGSLIDIAMAELNPGNNMISINFFRLFRVMRLVKLLSKGEGIRTLLWTFFKSFQALPWVAILIGLIFFIYGVVGMQVFG-----KIAPQEGSNINRNNNFQTFLQALLVLFRSATGEAWQEIMLSCRKHPDVICDERSEDRGNPGGCGTDFAYPYFISFFVVCSFLILNLFVAVIMDNF 1601 HSP 4 Score: 88.1965 bits (217), Expect = 1.709e-17 Identity = 69/235 (29.36%), Postives = 120/235 (51.06%), Query Frame = 0
Query: 1160 NEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALR-HHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQ 1393
NE KGG+ LD T + + KKA L+ L R + + + ++ + I++ + LN + +HY Q + + NLFF+V+FT EM LKM++L YF +N FD VV+ S+ L L++ + + P L V+R ++ R ++ + + L+ SLV + ++ ++ ++LFL +FIFS+ GM +F K T + +F TF ++ +FQ
Sbjct: 555 NEADGKGGA-LDVDGTGEPSSWFQKKKKA-----LEKLNR---RARRVCRKIVKSXAMFWIIIILVFLNTCVLATEHYKQPIWLDDFQEFTNLFFVVLFTFEMFLKMYSLGFQGYFVSLFNRFDCFVVISSILELILTN---ENIMPPLGLSVLRCVRLLRTFKVTRYWSSMGNLVKSLVNSIASINSLLVILFLFIFIFSLLGMQIFGG-KFTKSLESRSHFDTFPQSCLTVFQ 776 HSP 5 Score: 86.2705 bits (212), Expect = 6.803e-17 Identity = 49/148 (33.11%), Postives = 85/148 (57.43%), Query Frame = 0
Query: 557 NYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENIS-----GLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFR 699
N FF +F E F K+ ++ + +F +N FD +V+ S +EL+ N + GLS+LR RLLR FK+ + W S+ +++ + N+I ++++L +L + IFIF+++GMQ+FG + K + R +F F S + VF+
Sbjct: 637 NLFFVVLFTFEMFLKMYSLGFQGYFVSLFNRFDCFVVISSILELILTNENIMPPLGLSVLRCVRLLRTFKVTRYWSSMGNLVKSLVNSIASINSLLVILFLFIFIFSLLGMQIFGGKFT--------KSLESRSHFDTFPQSCLTVFQ 776 HSP 6 Score: 79.7221 bits (195), Expect = 6.814e-15 Identity = 43/176 (24.43%), Postives = 91/176 (51.70%), Query Frame = 0
Query: 131 NALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTAST--------EVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSA---LRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMG 295
+A + P + R + + H F ++ I+++ ++ +D + S + FT I+T E +K+ + G + + R +N LD LV+A+S ++ + G+ S LR RV R L+++ GLK +V ++ + K + +++++T+ L +FA++G+Q++ G
Sbjct: 1014 SAFYIFPPNNQFRILCHFICNHSYFGNIVLVCIMVSSAMLAAEDPLNSNSERNKILNYFDYFFTTIFTIEVCLKVISYGFLLHPGAFCRSGFNLLDLLVVAVSLISFIFSSGAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAXKTIGNIVLVTLLLQFMFAVIGVQLFKG 1189 HSP 7 Score: 72.0182 bits (175), Expect = 1.419e-12 Identity = 125/618 (20.23%), Postives = 235/618 (38.03%), Query Frame = 0
Query: 550 TSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVE--LLAENISGLSM--LRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMH---SFMIVFRVLCGE-WIESMWDCMFVAGIT-CVPYFLATVLIANLVILNLFLALLLSSFT---------------------------------------------DMGGNKAE--DHEKDKIQIAFERIGWC-------FRGGPFSKRNQEEK--------RKREAL-----------ANSDDLDDSESMP--------NKDGYSDNYSKQ---DSIIGNGIDLGFSKGGLSDVYEEMGGSYDKTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNI--PI-FKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNT 1067
+L Y F IF E K+ A P + WN+ DF IV++ + L + I G + LR+FR+LR +L + + N T LC G VC W+ P + T+F H S + VF+ + E W + ++ G + YF++ V++ ++NL L +L F+ ++GG K + H+ D + + + RG FSK ++ K R+R+ + ++DL++ S+P NKD ++ SK+ DS + KGG DV D T E + + +E ++ R R + +++++ I+++L+ +++ V+ E ++ +L D + + +F E +K++S+GF YF + + D +V S++ +L NI P+ +R +R LR + M +V +L+ ++ SI ++LV+ +F IF+++G+ G++ K ++S +
Sbjct: 204 NQILEKVEYIFLVIFTTECVMKIIAYGFWQHPTAYLRSAWNMLDFTIVMIGVISTILSSLRIEGFDVKALRAFRVLRPLRLVSG----------VPREMEETDNPT--LC---------GGNYKCDEEAGYVCREYWEG--PNFGITNFDHFGLSMLTVFQCITLEGWTDVLYWVQDAMGSSWQFIYFVSXVVLGAFFVMNLILGVLSGEFSKEREKAQSRGDFQKLRQKEQMEDDLEGYMEWLTVAELIEPSPTDDNIGGLKVDVGKHKGDPVVMGLLKSTMLPLQQVLEGRGDEFSKEREKAKSRGDFQKHRERQQIEEDLRGYLDWITQAEDLENDPSLPPPNLLGAKNKDSSTNRSSKEISRDSFSARLTNEADGKGGALDV--------DGTGEPSSWFQKKKKALE-----------------------KLNRRARRVCRKIVKSXAMFWIIIILVFLNTCVLATEH--YKQPIWLDDFQEFTNLFFVVLFTFEMFLKMYSLGFQGYFVSLFNRFDCFVVISSILEL---ILTNENIMPPLGLSVLRCVRLLRTFKVTRYWSSMGNLVKSLVNSIASINSLLVILFLFIFIFSLLGMQIFGGKFTKSLESRS 762 HSP 8 Score: 65.855 bits (159), Expect = 9.793e-11 Identity = 37/125 (29.60%), Postives = 69/125 (55.20%), Query Frame = 0
Query: 339 DKLVLCGNSSGAGVCPD--GFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWEN-LYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEE 460
D LCG G C + G+ C + PN+G T+FD+FG S L F+ +T + W + LY + W I+F+ + LG+F+++NLIL +++ + + + +A ++R + ++L + E+
Sbjct: 296 DNPTLCG---GNYKCDEEAGYVCREYWEGPNFGITNFDHFGLSMLTVFQCITLEGWTDVLYWVQDAMGSSWQFIYFVSXVVLGAFFVMNLILGVLSGEFSKEREKA--QSRGDFQKLRQKEQMED 415 HSP 9 Score: 62.003 bits (149), Expect = 1.460e-9 Identity = 44/131 (33.59%), Postives = 62/131 (47.33%), Query Frame = 0
Query: 140 HPIRRIALLVLTHPLFSMFIIFTILLNCYVMI------QKDTEYT----ASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYV-TILIDLG----SFSALRTFRVFRALKSVAVIP 255
+PIR+ + + F I+ TIL NC + +DT T E +F I+T E +K+ A G YLR AWN LDF ++ + + TIL L ALR FRV R L+ V+ +P
Sbjct: 159 NPIRKRFIQFVEWKPFEFLILLTILGNCVALAIYTPFPAEDTNETNQILEKVEYIFLVIFTTECVMKIIAYGFWQHPTAYLRSAWNMLDFTIVMIGVISTILSSLRIEGFDVKALRAFRVLRPLRLVSGVP 289 HSP 10 Score: 56.6102 bits (135), Expect = 6.179e-8 Identity = 48/177 (27.12%), Postives = 84/177 (47.46%), Query Frame = 0
Query: 138 PFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMI----QKDTEYTASTEV---VFTAIYTYESAIKLFARGLVWDRF-TYLRDAWNWLDFLVIAMSYVTILI-------DLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQ 299
P +PI+ +T P+F I IL+N + Q+ YTA +V +FT +T E KL A RF Y D WN DF+++ S + I + ++ S + R FRV R +K ++ G++T++ S + L V +L + ++ ++G+Q++ + Q
Sbjct: 1340 PKNPIQYKLWAFVTSPVFEYTIFAMILINTLSLAMKFYQQPQTYTAFLDVLNVIFTVFFTLEFVFKLGAF-----RFKNYFGDPWNSFDFIIVLGSLIDIAMAELNPGNNMISINFFRLFRVMRLVKLLSKGEGIRTLLWTFFKSFQALPWVAILIGLIFFIYGVVGMQVFGKIAPQ 1511 HSP 11 Score: 55.0694 bits (131), Expect = 1.814e-7 Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 0
Query: 624 KSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFV------AGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGG--NKAEDHE 759
+ WK L ++L + N+I A+ +L +L + + IFA++G Q+FG YV+ + K R NF F S + VF++L GE W M+D + GI YF+ + N ++LN+FLA+ + + D ++AE E
Sbjct: 783 RYWKRLQNLLGSLINSIXAIVSLLVLLFLFLGIFALLGTQVFGGKYVQSKSSGKNH--YSRANFDSFSQSLLSVFQILTGEDWNVVMYDGIQAFGGVNSIGIVSSLYFIILFICGNYILLNVFLAIAVDNLADADALEDEAEKEE 925
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Match: EMLSAG00000006479 (supercontig:LSalAtl2s:LSalAtl2s354:211467:213613:-1 gene:EMLSAG00000006479 transcript:EMLSAT00000006479 description:"maker-LSalAtl2s354-snap-gene-2.26") HSP 1 Score: 225.713 bits (574), Expect = 6.930e-67 Identity = 101/176 (57.39%), Postives = 140/176 (79.55%), Query Frame = 0
Query: 1432 AVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFK 1607
+ F++ YL+++FLIIINMYIAVILENYSQA+EDVQEG+T +DY+++YE+W++FDP GTQY+ Y L +FLDVLEPPLQI KPNK+KI+ MDIPI + +D +C D+LD LT+DFFARKGN ++++ +E +VT ++RPGY+ +SS++W+QRE YCA LIQR++K
Sbjct: 4 GIAFLLTYLIISFLIIINMYIAVILENYSQATEDVQEGLTGDDYDMYYEIWQQFDPNGTQYLKYNALSDFLDVLEPPLQIHKPNKYKIVSMDIPICK----------KDLCYCVDVLDALTKDFFARKGNPVEET--VELGEVTAQSERPGYDPISSTLWRQREDYCARLIQRAWK 167
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Match: EMLSAG00000004952 (supercontig:LSalAtl2s:LSalAtl2s260:1045447:1062229:1 gene:EMLSAG00000004952 transcript:EMLSAT00000004952 description:"maker-LSalAtl2s260-snap-gene-10.24") HSP 1 Score: 218.009 bits (554), Expect = 2.673e-57 Identity = 191/683 (27.96%), Postives = 331/683 (48.46%), Query Frame = 0
Query: 879 QGNPEEPFWQVW-----SRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTI-------CREIGAPAEWVNSRVTFDNVA----------TWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALR-HHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIK---GARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKIT--TGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAI--SNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRK--PNK---FKIIQMDIPI 1526
+ +P PF ++ +R R++ + YF + +LV I+VSS + ED P I Y + +Y N LD V+V+VS+I+ A AG I + K +R LR LRPLRA+ + +G+K+V+ A+I ++ +I N+++V ++ +FA+IGV G++Y C DS+ + + E + + EW + +DNVA T++GW ++ ++DS P + M+I+++++I++ +FF +N+ VG +I F QK + + ++QR I A KP + L P Q I+ + KF+ +V G I LN +++ Y+Q ++ LD LN F + F E ++KM A R YF +PWN FD ++V+ G F+ + + ++ R LRL+K IRTLL++ + +F AL + LL+ LV FI+ V GM +F + I T +NFQ F +LF+ T W + L+ S + CD E G+P CGS +A F+ ++ +FL I+N+++AVI++N+ + D + + F +W E+DP+ + + + + L + PPL K P++ +++ M++P+
Sbjct: 672 KKDPIPPFSSLFIFSPTNRFRVLCYNFCNHAYFANFILVCIMVSSASLAAEDPLHSKSPRNIVIAY--------------GAVGHKGAYARYPANI---LDLVVVSVSIISI-AFRDSAGAISVLKILRVLRVLRPLRAVNRAKGLKLVIXAVIVSVSTIQNIVLVTVLLQFLFAVIGVQLFKGKFYSCSDSS---KMTEEECQGQYVDFKKSDWAQPTVLEREWSLNDFHYDNVAKGMLTLFVVSTFEGWPGILYTSLDSHAEDTGPLPISRPSMFIFYIVYIIIIAFFMVNIFVGFVIVTF--QKEGESPFANCELDKNQRNCIDYTLNA---KPAR-LYLPSDPVQYRIWAWAXSSKFEYVVFGAILLNTISLAMSFYNQPQIYSDFLDLLNYIFTIFFALEFVIKMAAFRPKEYFCDPWNTFDCIIVI----GSFIDIGMSSLGSGDGGGISINFFRLFRALRLVKLLSKDESIRTLLWTFIKSFQALPYVMLLIALVFFIYGVVGMQVFGKIAINEDTSIHSNNNFQNFQSALIVLFRSATGEAWQDIMLSCIPSPDVECDEESEEAGNPAGCGSIIAYPYFISFFIATSFL-ILNLFVAVIMDNFDYLTRD-WSILGAHHLDEFVNLWSEYDPDAKGCIKHMDVVQLLRKINPPLGFGKLCPHRNACKRLVAMNMPL 1321 HSP 2 Score: 116.316 bits (290), Expect = 4.260e-26 Identity = 83/272 (30.51%), Postives = 136/272 (50.00%), Query Frame = 0
Query: 132 ALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMI------QKDTE----YTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSF-----SALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMT 388
+++ S +PIR + V+ F FI+ TIL C + DT + EV+F I+T E IK+ A GL YLR+ WN++DF ++ + ++ IL+ S ALR FRV R L+ V+ +P L+ +++AI+ ++ L + +L +F++ +++++GLQ++ G++ + C F N+T G L I+D LCG G C G C + P PN+G T+FDNF S L F+ +T
Sbjct: 47 SIYLFSLKNPIRLKCITVVEWKAFEFFILATILATCVSLALHKPYPNGDTNDLNLFLEKIEVIFMVIFTGECVIKIVAYGLYQHEEAYLRNTWNFIDFSIVMIGFMDILLSSLSIEGFDVKALRAFRVLRPLRLVSGVPSLQVVLNAILMAIFPLFHIALLVLFVIIIYSIIGLQMFQGLMHKAC---------FDNIT--GVL----------------IDDDPRLCG---GNYQCETG-VCREYIPGPNFGITNFDNFILSMLTVFQCIT 287 HSP 3 Score: 98.2117 bits (243), Expect = 1.429e-20 Identity = 62/217 (28.57%), Postives = 108/217 (49.77%), Query Frame = 0
Query: 557 NYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVEL-------LAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFVAGITC------------------VPYFLATVLIANLVILNLFLALLLSSF 747
NY FT FALE K+AA P+ +F D WN FD +IV+ SF+++ ++ R FR LR+ KL +S+ +L + AL + ++ ++ FI+ V+GMQ+FG+ + + + + NF +F + +++FR GE W + M C+ + C PYF++ + + +ILNLF+A+++ +F
Sbjct: 1039 NYIFTIFFALEFVIKMAAFRPKEYFCDPWNTFDCIIVIGSFIDIGMSSLGSGDGGGISINFFRLFRALRLVKLLSKDESIRTLLWTFIKSFQALPYVMLLIALVFFIYGVVGMQVFGKIAINEDTS-----IHSNNNFQNFQSALIVLFRSATGEAWQDIMLSCIPSPDVECDEESEEAGNPAGCGSIIAYPYFISFFIATSFLILNLFVAVIMDNF 1250 HSP 4 Score: 72.4034 bits (176), Expect = 9.236e-13 Identity = 53/182 (29.12%), Postives = 88/182 (48.35%), Query Frame = 0
Query: 580 FFTDGWNIFDFVIVVLSFVELLAENIS-----GLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMF-------VAGITCVPYFLATVLIANLVILNLFLALLLSSFT 748
+F +N FD +V+ S +EL+ G+S+LR RLLR FK+ + W SL ++L + N+I A+ +L +L + + I+A++G QLFG + E R+L GE W M+D + V G+ YF+ +I N ++LN+FLA+ + +
Sbjct: 405 YFISLFNRFDCFVVLSSILELVLTRTHIMPPLGMSVLRCIRLLRAFKVTRYWTSLKNLLKSLINSIEAIFSLIVLLFLFLGIYALLGSQLFGGKFXE---------------------------RILTGEDWNAVMYDGILAYGGPQTVLGMFASLYFITLFIIGNYILLNVFLAIAVDNLA 559 HSP 5 Score: 68.5514 bits (166), Expect = 1.611e-11 Identity = 55/183 (30.05%), Postives = 95/183 (51.91%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDA-LYYLDRILTGVFFIETSIKLFSMGFIK----YFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIF--KTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYK-CIDSNTG 1068
RL ++E K FE +L IL + + L + ++ L ++ I +F E IK+ + G + Y N W ++DF IV +I F LL + +I F K +R R LRPLR ++ + ++VV+NA++ A+ +F++ ++ L +I++IIG+ G +K C D+ TG
Sbjct: 58 RLKCITVVEWKAFEFFILATILATCVSLALHKPYPNGDTNDLNLFLEKIEVIFMVIFTGECVIKIVAYGLYQHEEAYLRNTWNFIDFSIV---MIGFMDILLSSLSIEGFDVKALRAFRVLRPLRLVSGVPSLQVVLNAILMAIFPLFHIALLVLFVIIIYSIIGLQMFQGLMHKACFDNITG 237 HSP 6 Score: 67.781 bits (164), Expect = 2.835e-11 Identity = 40/138 (28.99%), Postives = 77/138 (55.80%), Query Frame = 0
Query: 1247 LDNLNLFFIVVFTTEMLLKM--FALRHH---YFSEPWNLFDLVVVLLSLAGLFLSDI-IEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDV 1378
L+ + + F+V+FT E ++K+ + L H Y WN D +V++ + LS + IE + V + +R ++ R LRL+ G ++ +L +++MA L +IALL+ V+ I+S+ G+ +F+ + FD++
Sbjct: 103 LEKIEVIFMVIFTGECVIKIVAYGLYQHEEAYLRNTWNFIDFSIVMIGFMDILLSSLSIEGFDV-----KALRAFRVLRPLRLVSGVPSLQVVLNAILMAIFPLFHIALLVLFVIIIYSIIGLQMFQGLMHKACFDNI 235 HSP 7 Score: 59.6918 bits (143), Expect = 6.636e-9 Identity = 45/170 (26.47%), Postives = 88/170 (51.76%), Query Frame = 0
Query: 131 NALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILI--DLGSFSAL---RTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMG 295
++LF SP + R + H F+ FI+ I+++ + +D ++ S + + A G V + Y R N LD +V+++S ++I G+ S L R RV R L++V GLK ++ A++ SV +++++++T+ L +FA++G+Q++ G
Sbjct: 680 SSLFIFSPTNRFRVLCYNFCNHAYFANFILVCIMVSSASLAAEDPLHSKSPRNI------------VIAYGAVGHKGAYARYPANILDLVVVSVSIISIAFRDSAGAISVLKILRVLRVLRPLRAVNRAKGLKLVIXAVIVSVSTIQNIVLVTVLLQFLFAVIGVQLFKG 837 HSP 8 Score: 56.6102 bits (135), Expect = 5.890e-8 Identity = 47/189 (24.87%), Postives = 82/189 (43.39%), Query Frame = 0
Query: 560 FTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENIS----GLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVL----PRW------------------------NFTDFMHSFMIVFRVLCGEWIESMWDC 712
F IF E K+ A + + WN DF IV++ F+++L ++S + LR+FR+LR +L SL +L + I L ++ ++ +I I++++G+Q+F Q + K C VL PR NF +F+ S + VF+ + E + W+
Sbjct: 110 FMVIFTGECVIKIVAYGLYQHEEAYLRNTWNFIDFSIVMIGFMDILLSSLSIEGFDVKALRAFRVLRPLRLVSGVPSLQVVLNAILMAIFPLFHIALLVLFVIIIYSIIGLQMF-QGLMHKACFDNITGVLIDDDPRLCGGNYQCETGVCREYIPGPNFGITNFDNFILSMLTVFQCITLEGFMTQWEA 297
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Match: EMLSAG00000007396 (supercontig:LSalAtl2s:LSalAtl2s420:189079:382322:1 gene:EMLSAG00000007396 transcript:EMLSAT00000007396 description:"maker-LSalAtl2s420-snap-gene-3.14") HSP 1 Score: 208.379 bits (529), Expect = 5.101e-56 Identity = 106/236 (44.92%), Postives = 154/236 (65.25%), Query Frame = 0
Query: 505 VLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFV---AGI--TCVPYFLATVLIANLVI 735
L I+V D + + +CI N AF+ +H+ GMS +L GN FT+ F LE+ KL A+S YF GWNIFD +IV S ++L E+++G+S+LR RL+RV KLA+SW ++ +L+I+ +T+GAL NLTF+L I+I+IFAV+GMQLFG++Y + P +PRWNFTDF HSFM++FR+LCGEWIE +WDCM G+ +C+ FL +++ N ++
Sbjct: 460 ALFILVHDMLFDTCVTICIIANTAFLAAEHH--------GMSNDLKHVLNIGNKVFTSFFTLEAILKLIALSKEYF-ESGWNIFDLIIVFASLLDLSVESVNGISVLRGMRLMRVLKLAQSWTTMKVLLSIIISTLGALGNLTFLLIIVIYIFAVLGMQLFGKTYTPENFYPD---EVPRWNFTDFFHSFMMIFRILCGEWIEPLWDCMRAEAKVGVAESCLAIFLPALVMGNFMV 683 HSP 2 Score: 166.777 bits (421), Expect = 2.136e-42 Identity = 85/181 (46.96%), Postives = 116/181 (64.09%), Query Frame = 0
Query: 275 IVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEA 454
+ LTIF L VFAL LQ+YMG L CVK++ + + N+ W+ NE+NWY + ++ CGN+SGA CP G++CL+ G NPN+GYTSFDN S L F+L+T DYWEN+Y + + T GP ++IFF +F GSFYLINL+LA+VAMSY+E E ++E +E A
Sbjct: 1 MTLTIFCLMVFALFALQVYMGQLRNKCVKEYVPGLANTS-------NYTEWILNENNWYFRDGSPEV--CGNASGARPCPTGYSCLQHIGDNPNFGYTSFDNLLWSMLTTFQLITLDYWENVYNMIVATGGPMHVIFFTIVVFFGSFYLINLMLAVVAMSYEEEAEAVNLEKQREADEAAA 172 HSP 3 Score: 87.4261 bits (215), Expect = 1.850e-17 Identity = 70/224 (31.25%), Postives = 106/224 (47.32%), Query Frame = 0
Query: 1203 KPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGF--DDVH--NFQTFTKTFTLLFQI-----------CTSA----GWAEAWLAI 1407
K Q +F ++ + FD V I N + +H+ S VL+ N F FT E +LK+ AL YF WN+FDL++V SL L + + + V+R ++ RVL+L + ++ LL ++ AL N+ LL +V++IF+V GM LF F D+V NF F +F ++F+I C A G AE+ LAI
Sbjct: 456 KFQNALFILVHDMLFDTCVTICIIANTAFLAAEHHGMSNDLKHVLNIGNKVFTSFFTLEAILKLIALSKEYFESGWNIFDLIIVFASLLDLSVESV--------NGISVLRGMRLMRVLKLAQSWTTMKVLLSIIISTLGALGNLTFLLIIVIYIFAVLGMQLFGKTYTPENFYPDEVPRWNFTDFFHSFMMIFRILCGEWIEPLWDCMRAEAKVGVAESCLAI 671 HSP 4 Score: 53.1434 bits (126), Expect = 6.586e-7 Identity = 40/157 (25.48%), Postives = 76/157 (48.41%), Query Frame = 0
Query: 146 ALLVLTHP-LFSMFIIFTILLNCYVM------IQKDTEYTAST-EVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILID-LGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIY 293
AL +L H LF + I+ N + + D ++ + VFT+ +T E+ +KL A Y WN D +++ S + + ++ + S LR R+ R LK +K ++S I+ ++ L ++ L I ++ +FA+LG+Q++
Sbjct: 460 ALFILVHDMLFDTCVTICIIANTAFLAAEHHGMSNDLKHVLNIGNKVFTSFFTLEAILKLIALSK-----EYFESGWNIFDLIIVFASLLDLSVESVNGISVLRGMRLMRVLKLAQSWTTMKVLLSIIISTLGALGNLTFLLIIVIYIFAVLGMQLF 611 HSP 5 Score: 52.7582 bits (125), Expect = 8.570e-7 Identity = 40/161 (24.84%), Postives = 81/161 (50.31%), Query Frame = 0
Query: 900 LIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYY 1060
L+ + F++ V + I+ ++ + E L L +++ T F +E +KL ++ +YF + W D +IV SL++ S+ I + + MR +R L+ ++ MKV+++ +I L ++ N+ + +I IFA++G+ L G+ Y
Sbjct: 464 LVHDMLFDTCVTICIIANTAFLAAEHHGMSND--LKHVLNIGNKVFTSFFTLEAILKLIALS-KEYFESGWNIFDLIIVFASLLDL--SVESVNGISVLRGMRLMRVLKLAQSWTT---MKVLLSIIISTLGALGNLTFLLIIVIYIFAVLGMQ-LFGKTY 615
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Match: EMLSAG00000007884 (supercontig:LSalAtl2s:LSalAtl2s464:432083:573266:-1 gene:EMLSAG00000007884 transcript:EMLSAT00000007884 description:"maker-LSalAtl2s464-augustus-gene-6.21") HSP 1 Score: 202.986 bits (515), Expect = 1.540e-52 Identity = 136/450 (30.22%), Postives = 226/450 (50.22%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDI----WFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIF---KTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPA-EWVNSRVTFDN----------VATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALR-HHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYF-VSPTLLRVVRVAKIGR 1319
RL +++ +F+ IVL+ I + + +E W + L L+ I T +F IE ++K S G I YF N W +D +V VS ++ + LL + IF + R +RALRPLR + + G+K+VV L+ +L I N++++C F++IF I+GV G +Y C + ++ N T C E+ W+N + FDN +++ GW+++M +D+V QQP N + IYF+ F++L FF LN+ VGV+++ F+ + + + + K I ++ K P + + + V+T+K F + + IGLN++TM + Y V + L N FF VF E +K+ AL Y S+ WN D+V+VLLS+ G+ L +I ++PT++RV+RV +I R
Sbjct: 1280 RLKCTEITSRGWFDFIVLLFIASNCITLAMERPNIPPWSPERKLL----NVLNSIFTFIFTIEMAMKAISTGLIYGAEAYFKNGWNIMDGSLVIVSFVDTVSGLLLGKSSKIFDILRVFRLVRALRPLRVINRAPGLKLVVQTLLSSLKPIGNIVLICCTFFIIFGILGVQLFKGIFYYCEGPHAN------IVKNKTQCLELSDKGNRWINHKYNFDNLGHALMSLFVLSSKDGWVNIMYQGLDAVGLDQQPKENFNEWRLIYFISFLLLVGFFVLNMFVGVVVENFHRCRAEQEKEERARRAAKRAKKIEERRRRMMKAPYYI---HYSHYRLSVHKVVTSKYFXLAISAVIGLNVITMAMEFYMMPVVLAYALKVCNYFFTAVFILEAGMKISALGIGRYLSDKWNQLDVVIVLLSVVGIVLEEIKSDMMPINPTIMRVMRVLRIAR 1716 HSP 2 Score: 120.168 bits (300), Expect = 2.879e-27 Identity = 125/534 (23.41%), Postives = 223/534 (41.76%), Query Frame = 0
Query: 124 IYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQK---------DTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTIL--IDLGS----FSALRTFRVFRALKSVAVI---PGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLN--WDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAG----------PWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRS---FRLLRVFKLAK 624
+YR A L+ P H IR + + F ++ I NC + + + + +FT I+T E A+K + GL++ Y ++ WN +D ++ +S+V + + LG F LR FR+ RAL+ + VI PGLK +V ++ S+K + +++++ +F +LG+Q++ G+ + H N++ +N T +L+ +RW+N++ N FDN G + + F L ++D W N+ L G W +I+FI + L F+++N+ + +V ++ + A +E EE + E +A ++ + L K +V + L I I +NV M ++ Y M L NYFFTA+F LE+ K++A+ + +D WN D VIV+LS V ++ E I M + R++RV ++A+
Sbjct: 1262 LYRRDA-YTLYVFHPNHKIRLKCTEITSRGWFDFIVLLFIASNCITLAMERPNIPPWSPERKLLNVLNSIFTFIFTIEMAMKAISTGLIYGAEAYFKNGWNIMDGSLVIVSFVDTVSGLLLGKSSKIFDILRVFRLVRALRPLRVINRAPGLKLVVQTLLSSLKPIGNIVLICCTFFIIFGILGVQLFKGIFYY--CEGPHANIV-KNKTQCLELSDKGNRWINHKYN-----------------------------------------FDNLGHALMSLFVLSSKDGWVNIMYQGLDAVGLDQQPKENFNEWRLIYFISFLLLVGFFVLNMFVGVVVENFHRCR------AEQEKEERARRAAKRAKKIEERRRRMMKAPYYIHYSHYRLSVHK--------------------VVTSKYFXLAISAVIGLNVITMAMEFY--------MMPVVLAYALKVCNYFFTAVFILEAGMKISALGIGRYLSDKWNQLDVVIVLLSVVGIVLEEIKSDMMPINPTIMRVMRVLRIAR 1716 HSP 3 Score: 115.546 bits (288), Expect = 7.307e-26 Identity = 81/252 (32.14%), Postives = 133/252 (52.78%), Query Frame = 0
Query: 519 IILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVEL---LAENI-----SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKD 761
I+ CI +N M IE+H T ++ N F+AIFA+E K++A + +DG+N+FD +IV+LS +E+ L I SGLS+LR+FRLLR+ KL + +L L +M T+ ++ +L + IFIF+++GM LFG + +KV N + KC R NF + + + VF++L E W ++ M YF+ + N V+ NL +A+L+ F++ ++ D +
Sbjct: 803 ILFCILINTFSM-----GIEFHKQ---PELLTKIVEVSNLVFSAIFAVEMILKVSAYGIFRYISDGFNVFDGLIVILSSIEIYNGLIHGIEMDGNSGLSVLRTFRLLRILKLVRFLPNLRRQLVVMLKTMDNVAVFFALLMLFIFIFSILGMNLFGCKFCDKVGNQR-KC--DRKNFDSLLWATVTVFQILTQEDWNIVLFSGMQRTSHWAALYFVTLMTFGNYVLFNLLVAILVEGFSNQDEKRSSDRNSE 1043 HSP 4 Score: 71.633 bits (174), Expect = 1.980e-12 Identity = 71/276 (25.72%), Postives = 126/276 (45.65%), Query Frame = 0
Query: 516 ELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRY----FFTDGWNIFDFVIVVLSFVELLAENISGLSMLRS---FRLLRVFKLAKSWKSLNDILTIMG---------NTIGALSNLTFVLCIIIFIFAVMGMQLFGQ--SYVE----KVCNPKWKC----------VLPRWNFTDFMHSFMIVFRVLCGE--WIESMWDCMFVAGITCVP----------YFLATVLIANLVILNLFLALLLSSF 747
+ ++L IA N + ++ NI SP LL N FT IF +E K + Y +F +GWNI D +V++SFV + +SGL + +S F +LRVF+L ++ + L I G +++ + N+ + C IF ++G+QLF Y E + K +C + ++NF + H+ M +F VL + W+ M+ + G+ P YF++ +L+ +LN+F+ +++ +F
Sbjct: 1293 DFIVLLFIASNCITLAMERPNIP-----PWSPE-RKLLNVLNSIFTFIFTIEMAMKAISTGLIYGAEAYFKNGWNIMDGSLVIVSFV----DTVSGLLLGKSSKIFDILRVFRLVRALRPLRVINRAPGLKLVVQTLLSSLKPIGNIVLICCTFFIIFGILGVQLFKGIFYYCEGPHANIVKNKTQCLELSDKGNRWINHKYNFDNLGHALMSLF-VLSSKDGWVNIMYQGLDAVGLDQQPKENFNEWRLIYFISFLLLVGFFVLNMFVGVVVENF 1557 HSP 5 Score: 70.0922 bits (170), Expect = 4.716e-12 Identity = 65/280 (23.21%), Postives = 116/280 (41.43%), Query Frame = 0
Query: 1217 FDMIVMGFIGLNMLTMMCDHYDQSVTWT---FVLDNLNLFFIVVFTTEMLLKMFAL-----RHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNV-----------------------KITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASED 1465
FD IV+ FI N +T+ + + W+ +L+ LN F +FT EM +K + YF WN+ D +V++S ++ K +LRV R+ + R LR+I A G++ ++ +L+ + + NI L+ IF + G+ LFK + K + +NF LF + + GW + D E N +I+ I +L+L ++NM++ V++EN+ + +
Sbjct: 1292 FDFIVLLFIASNCITLAMERPNIP-PWSPERKLLNVLNSIFTFIFTIEMAMKAISTGLIYGAEAYFKNGWNIMDGSLVIVSFVDTVSGLLLGKSSKIFDILRVFRLVRALRPLRVINRAPGLKLVVQTLLSSLKPIGNIVLICCTFFIIFGILGVQLFKGIFYYCEGPHANIVKNKTQCLELSDKGNRWINHKYNFDNLGHALMSLFVLSSKDGWVNIMYQGLDAVGLDQQPKE-------NFNEWRLIYFISFLLLVGFFVLNMFVGVVVENFHRCRAE 1563 HSP 6 Score: 69.3218 bits (168), Expect = 9.817e-12 Identity = 63/286 (22.03%), Postives = 130/286 (45.45%), Query Frame = 0
Query: 899 QLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDR-ILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINF------GASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNVATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTED 1177
+++++ F+ +L IL+++F M +E F +P L+ + + + + +F +E +K+ + G +Y + + D +IV +S I G + G + + +T R LR L+ +R + L VV+ + + F +L ++F IF+I+G+N G ++ +V R+ W + VT + T + W V+ + + T+ + +YFV + G++ NLLV ++++ F+ Q K S +S ++D
Sbjct: 792 RIVDHNIFQRGILFCILINTFSMGIE---FHKQPELLTKIVEVSNLVFSAIFAVEMILKVSAYGIFRYISDGFNVFDGLIVILSSIEIYNGLIHGIEMDGNSGLSVLRTFRLLRILKLVRFLPNLRRQLVVMLKTMDNVAVFFALL---MLFIFIFSILGMNLF------------GCKFCDKVGNQRKCDRKNFDSLLW--ATVTVFQILTQEDWNIVLFSGM----------QRTSHWAALYFVTLMTFGNYVLFNLLVAILVEGFSNQDEKRSSDRNSEYSKD 1047 HSP 7 Score: 68.5514 bits (166), Expect = 1.434e-11 Identity = 80/320 (25.00%), Postives = 144/320 (45.00%), Query Frame = 0
Query: 1156 IDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALR-HHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIAL---LLFLVMFIFSVFGMSLFKNVKITTGFD-----DVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTF--LIIINMYIAVILENYSQASE 1464
ID+ N K + +L+ MT + + K S + + + QA + ++ + F ++ I +N +M + + Q T +++ NL F +F EM+LK+ A Y S+ +N+FD ++V+LS ++ I + L V+R ++ R+L+L++ +R LV+ + N+A+ LL L +FIFS+ GM+LF K D NF + +FQI T W + L S S+ AA+ F+ L +TF ++ N+ +A+++E +S E
Sbjct: 740 IDENN--KKRAIYSLNGSMTGEHELRVTPKKYNSIMEAFLFCSKGIRRFQAALERIVDHNIFQRGILFCILINTFSMGIEFHKQPELLTKIVEVSNLVFSAIFAVEMILKVSAYGIFRYISDGFNVFDGLIVILSSIEIYNGLIHGIEMDGNSGLSVLRTFRLLRILKLVRFLPNLRR---QLVVMLKTMDNVAVFFALLMLFIFIFSILGMNLF-GCKFCDKVGNQRKCDRKNFDSLLWATVTVFQILTQEDW----------------NIVLFSGMQRTSHWAALYFVTL---MTFGNYVLFNLLVAILVEGFSNQDE 1034 HSP 8 Score: 67.3958 bits (163), Expect = 3.749e-11 Identity = 51/180 (28.33%), Postives = 96/180 (53.33%), Query Frame = 0
Query: 135 FLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVM-----------IQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLD-FLVIAMSYVTIL-IDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQIC 301
FL+ +P+R+ + +L +P F + IL NC + + + + + V +T E IK+ A G V+ + YL + WN LD F+V+A + L ++ + S LRT RV R L+++ IP ++ +V ++ ++ L +V++L F+ +F ++G+Q++ G+L Q C
Sbjct: 38 FLNLSNPVRKFCIRILVNPWFERLTMTVILFNCVTLGMYHPCEDTDCKTRRCQILKNCDDVIYIYFTVEMFIKMIAMG-VFGKGCYLSETWNRLDCFIVLAGALEYCLKVEKLNLSTLRTVRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRQRC 216 HSP 9 Score: 63.5438 bits (153), Expect = 5.152e-10 Identity = 44/161 (27.33%), Postives = 80/161 (49.69%), Query Frame = 0
Query: 149 VLTHPLFSMFIIFTILLNCYVM---IQKDTEYTAS----TEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDL---------GSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIY 293
++ H +F I+F IL+N + M K E + +VF+AI+ E +K+ A G+ F Y+ D +N D L++ +S + I L S LRTFR+ R LK V +P L+ + ++ ++ N+ L + + +F++LG+ ++
Sbjct: 793 IVDHNIFQRGILFCILINTFSMGIEFHKQPELLTKIVEVSNLVFSAIFAVEMILKVSAYGI----FRYISDGFNVFDGLIVILSSIEIYNGLIHGIEMDGNSGLSVLRTFRLLRILKLVRFLPNLRRQLVVMLKTMDNVAVFFALLMLFIFIFSILGMNLF 949 HSP 10 Score: 58.5362 bits (140), Expect = 1.562e-8 Identity = 42/149 (28.19%), Postives = 74/149 (49.66%), Query Frame = 0
Query: 899 QLIENKYFESIVLVLILVSSFVMTL----EDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIK---YFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVC 1040
+++ N +FE + + +IL + + + ED +T+ I L D ++ F +E IK+ +MG Y W LD IV + + + T+RT+R LRPLRA+ ++ M+++V L+ LP + NVL++C
Sbjct: 51 RILVNPWFERLTMTVILFNCVTLGMYHPCEDTDCKTRRCQI--LKNCDDVIYIYFTVEMFIKMIAMGVFGKGCYLSETWNRLDCFIVLAGALEYCLKVEKLN----LSTLRTVRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLC 193 HSP 11 Score: 56.225 bits (134), Expect = 8.282e-8 Identity = 37/132 (28.03%), Postives = 68/132 (51.52%), Query Frame = 0
Query: 883 EEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLID-ALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKT-MRTLRALRPLRA 1012
+ P++ +S +RL +++ +KYF + +I ++ M +E F P ++ AL + T VF +E +K+ ++G +Y + W LD VIV +S++ + + +PI T MR +R LR R
Sbjct: 1589 KAPYYIHYSHYRLSVHKVVTSKYFXLAISAVIGLNVITMAME---FYMMPVVLAYALKVCNYFFTAVFILEAGMKISALGIGRYLSDKWNQLDVVIVLLSVVGIVLEEIKSDMMPINPTIMRVMRVLRIARG 1717
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Match: EMLSAG00000005510 (supercontig:LSalAtl2s:LSalAtl2s297:203090:236595:1 gene:EMLSAG00000005510 transcript:EMLSAT00000005510 description:"maker-LSalAtl2s297-augustus-gene-2.17") HSP 1 Score: 110.153 bits (274), Expect = 2.611e-24 Identity = 79/281 (28.11%), Postives = 149/281 (53.02%), Query Frame = 0
Query: 901 IENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFG----NAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRV------TFDN----------VATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNE 1161
+ +F+ ++++IL+SS + ED E P + L Y D + T +F IE +K+ +G + G + W LD ++V+ +LI+F G K+++ LR LRPL+ + ++ +K V + ++ +L ++FN+L+V ++F LIFA++GV G+++ C D++ G + E + E G + V RV +DN V T +GW+DV+ +++ S + P+ + M I+++++ V+ FF +N+ V ++I FNE
Sbjct: 329 VTKPFFDGFIMIVILLSSASLAAEDPVEEHHPRNL-LLQYFDYVFTAIFAIECLLKILDLGACAHPGSYLRDIWNVLDSLVVSCALISFYFQGTPMGQK--LKSVKLLRVLRPLKMVNRVPALKAVFDCVVTSLKNVFNILIVYMLFLLIFAMVGVQLFNGKFFYCSDASKGN--AEECQGEYFVFGEHGETSPTVERRVWDIKAFNYDNCGAAIITLFAVQTSEGWVDVLQNSMSSTFEDEGPFPWFSTEMAIFYIVYFVVFPFFFVNIFVALVIVTFNE 604 HSP 2 Score: 91.2781 bits (225), Expect = 1.444e-18 Identity = 75/243 (30.86%), Postives = 121/243 (49.79%), Query Frame = 0
Query: 518 FIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENIS------GLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFV------AGITCVPYFLATVLIANLVILNLFLALLLSSF 747
+I+ + +N + ++HYN + T L + F F E +L A+ P +F+ +N FD V++ S E+L N+ GLS LR+ RLLRVFK+ K W L +++ + N + ++ +L F+L + IFIFA++GMQLFG S+ + P NF +++ + VF+VL E W M+ + GI YF+ L+ N +LN+FLA+ S
Sbjct: 10 LVIILVFLNTCTVAVEHYN--------QPQWLTIFLYYAEFLFLGAFVFEMCIRLYALGPFIYFSSAFNRFDCVVITGSIFEVLWVNLQPRAGSFGLSGLRALRLLRVFKVTKYWSPLRNLVIALMNALSSIMSLLFLLFLFIFIFALLGMQLFGGSF-------NFPDETPTSNFNTIINALLTVFQVLTEEDWNNVMYXAIVSQGGRHNGGIIYSIYFVMLTLLGNYCLLNVFLAIACDSL 237 HSP 3 Score: 84.7297 bits (208), Expect = 1.797e-16 Identity = 52/177 (29.38%), Postives = 94/177 (53.11%), Query Frame = 0
Query: 131 NALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDT--EYTAST------EVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILID---LGS-FSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMG 295
++LF L+ +P R +T P F FI+ ILL+ + +D E+ + VFTAI+ E +K+ G +YLRD WN LD LV++ + ++ +G +++ RV R LK V +P LK + ++ S+KN+ +++++ + L +FA++G+Q++ G
Sbjct: 310 SSLFILTSTNPFRVGLHWFVTKPFFDGFIMIVILLSSASLAAEDPVEEHHPRNLLLQYFDYVFTAIFAIECLLKILDLGACAHPGSYLRDIWNVLDSLVVSCALISFYFQGTPMGQKLKSVKLLRVLRPLKMVNRVPALKAVFDCVVTSLKNVFNILIVYMLFLLIFAMVGVQLFNG 486 HSP 4 Score: 70.0922 bits (170), Expect = 4.789e-12 Identity = 75/330 (22.73%), Postives = 139/330 (42.12%), Query Frame = 0
Query: 371 TSFDNFGSSYLCAFRLMTQDYWEN-LYQITLRTAGPWN-----IIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAI------------------IVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKL----AAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRV---FKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSY 669
++F+ ++ L F+++T++ W N +Y + G N I+F+ LG++ L+N+ LAI S D+ E ++ + E + E +A A+ L GG+ D + QV +L V PF + FI++ I ++ A + + E+H + +F +Y FTAIFA+E K+ A P + D WN+ D ++V + + + L+S +LLRV K+ +L + + ++ + N+ V + + IFA++G+QLF +
Sbjct: 168 SNFNTIINALLTVFQVLTEEDWNNVMYXAIVSQGGRHNGGIIYSIYFVMLTLLGNYCLLNVFLAIACDSLDQAAELTAAEEAEKERQEEEQERQRLREQQELKAIGADGQLGDELRGDEEEGGEPPLPDMDD--EDQVRPILPYSSLFILTSTNPFRVGLHWFVTKPFFDGFIMIVILLSSASLAAEDPVEEHHPRNLLLQYF-------DYVFTAIFAIECLLKILDLGACAHPGSYLRDIWNVLDSLVVSCALISFYFQGTPMGQKLKSVKLLRVLRPLKMVNRVPALKAVFDCVVTSLKNVFNILIVYMLFLLIFAMVGVQLFNGKF 488 HSP 5 Score: 56.9954 bits (136), Expect = 4.995e-8 Identity = 61/244 (25.00%), Postives = 115/244 (47.13%), Query Frame = 0
Query: 1220 IVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHH-YFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEA-WLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFL---IIINMYIAVILEN 1458
+V+ + LN T+ +HY+Q T L F+ F EM ++++AL YFS +N FD VV+ S+ + ++ + L +R ++ RV ++ K +R L+ +L+ A +++++ LLFL +FIF++ GM LF NF T +FQ+ T W + AI ++ G + +I+ I +++LT L ++N+++A+ ++
Sbjct: 10 LVIILVFLNTCTVAVEHYNQPQWLTIFLYYAEFLFLGAFVFEMCIRLYALGPFIYFSSAFNRFDCVVITGSIFEVLWVNLQPR--AGSFGLSGLRALRLLRVFKVTKYWSPLRNLVIALMNALSSIMSLLFLLFLFIFIFALLGMQLFGGSFNFPDETPTSNFNTIINALLTVFQVLTEEDWNNVMYXAIVSQG---------------GRHNGGIIYSIYFVMLTLLGNYCLLNVFLAIACDS 236 HSP 6 Score: 53.5286 bits (127), Expect = 4.845e-7 Identity = 63/257 (24.51%), Postives = 114/257 (44.36%), Query Frame = 0
Query: 909 IVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSL-----INFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNVATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFN 1160
+V++L+ +++ + +E + +L LYY + + G F E I+L+++G YF +A+ D V++ S+ +N G +R LR LR + ++ +V AL+ AL SI ++L + +F IFA++G+ G + P+ T +N+ +T V T + W +VM AI S Q I IYFV+ +LG++ LN+ + + D +
Sbjct: 10 LVIILVFLNTCTVAVEH--YNQPQWLTIFLYYAEFLFLGAFVFEMCIRLYALGPFIYFSSAFNRFDCVVITGSIFEVLWVNLQPRAGSFG----LSGLRALRLLRVFKVTKYWSPLRNLVIALMNALSSIMSLLFLLFLFIFIFALLGMQLFGGSFN---------------FPDETPTSNFNT---IINALLTVFQVLTEEDWNNVMYXAIVS----QGGRHNGGIIYSIYFVMLTLLGNYCLLNVFLAIACDSLD 238
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Match: EMLSAG00000006773 (supercontig:LSalAtl2s:LSalAtl2s37:429923:435346:1 gene:EMLSAG00000006773 transcript:EMLSAT00000006773 description:"augustus_masked-LSalAtl2s37-processed-gene-4.2") HSP 1 Score: 106.686 bits (265), Expect = 3.824e-23 Identity = 135/623 (21.67%), Postives = 259/623 (41.57%), Query Frame = 0
Query: 178 TASTEVVFTAIYTYESAIKLFARGLVWD---RFTYLRDAWNWLDFLVIAMSYVTILID-------LGSFSALRTFRVFRALKSVAVIPGL------KTIVSAIM-YSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAG-VCPDGFTCLKGGP--NPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIF-FIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSP--FFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIM---GNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWN-FTDFMHSFMIVFRVLCGE-WIESMWDCM--------FVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQ 764
T + +++ ++T E K+ +RGL + Y++ W D +++ +++++ + +S L R R L + I K V+ I S + +V + +F ++++ LLG+Q + G ++ CV++ +T D+ + +S C G+G CP GF C+K P G+T F F +S ++ +Q+ W + A W F F IF ++ + N+ +A++ +++E++ Q +E + Q + E + A + V + +S + E+ + ++ P +F++L N A +T +I + P +F S + FT + LE K+ +S + + + F+ ++ V + + +L LS + F++LRV +L K+ L D + + G +G+L + F +C+++ I + M MQLF C LP + F F +FM +F++L E W E M M FV I YF+ L L++++LF+A++L N D E K++
Sbjct: 71 TYTADLICVLVFTIEMVTKIHSRGLFTSSGGKKPYIKSRWCQFDSMMLFFIVISVILQSFEMFSLVPRYSPLSMLRAARPLIMIRFIRVFLKFSMPKARVNQIFKRSSHQIYNVTIFFLFFMSLYGLLGVQ-FFGEINNHCVRN--------TVTQAEDVTLNDLTIPDS------------YCNPHDGSGHKCPKGFHCMKLSPLGKVKTGFTGFGEFATSVFTVYQAASQEGWVYIMYRASDAAQNWKAAFYFTTMIFFLAWMVKNVFIAVITETFNEIRVQFQETWSDRERIASSSQDPRRQQVLEGDQKAWKLVT-----------------VQENSHEGYAPEIFSKVLRSPAYHIFVMLITLAN-AIVTA---SISFQHTRDQRPREYFFSNQKILEFGFTLFYDLEVIFKVFCLSFKGYIQRTIHKFELLLAVFTTIHILPIRGLFLSWISIFQVLRVIRLIKASPMLEDFVYKIFGPGRKLGSL--IIFTMCLLV-ITSSMSMQLF--------------CFLPNLDKFETFPFAFMSMFQILTQEAWPEVMSKTMERVNPSLTFVVAI----YFILYHLFVTLIVMSLFVAVILD-------NLELDEESKKVK 623 HSP 2 Score: 100.138 bits (248), Expect = 3.643e-21 Identity = 146/614 (23.78%), Postives = 255/614 (41.53%), Query Frame = 0
Query: 1004 LRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQR------YSHEV------IPNMTICREIG--APAEWVN-SRVTFDNVAT----------WKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRP-FWKPQAIIFGVITNKKFDMIVMGFIGLNMLT---MMCDHY------------DQSVTWTFVLDNLNLF------------FIVVFTTEMLLKMFALR-HHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGN-----CGSNMAAVIFMI---LYLVLTFLIIINMYIAVILENYSQASEDVQEGITD-EDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKII--QMDIPIVRFINPDTGQSLEDCVFCADILDILT 1552
LR RPLR + M+ VV L I V V+ ++ +FA GV+ ++ C DS +R + +V IP C G P W+N R FDN+ T +KGW+D+ + I + IY +++ LGS L L VGV+I + E NKG + L T DQ ++ K +PL P+P K QA I+ +I + F FI + +LT ++C + D + T + D+ N + F E+ +KM A + Y+ DL V + + + ++ +E L V I R + ++ L+ ++ ++ I L +FL++ +++ G+ LF +VK + NF+T ++LF+I T E W + ++ + P L N CG+ +A + F Y+++T+ I++N+ +A+I+EN+S + ++ + D F W D +P +++ L +L+ L++ P K +++ M + R N D D F D+L +L+
Sbjct: 981 LRCFRPLRIFILVPHMRKVVCELCRGFKEIVLVGVLLIVLIFVFANYGVHLFGMKFAACNDSYIKERSKCVGIFRADVYVTKMNIPPKEDCPPPGLVVPRVWMNPRRFNFDNIGTSMLALFEVLSFKGWVDLRDVIIGKMGPAYA----------IYIHMYVFLGSMIGLTLFVGVVIANYRE--NKGTALL----TVDQMRWSDLKKXLKIAQPLHVPPKPENSKFQAFIYDIIQHLYFKR----FIAILVLTNSFLLCVKWKEEDDAPDRINLDSNGTVIYEEDDTNKTTLRDRLSTASSALTICFVIEVFMKMIAFTPYGYWQSRRXRGDLFVTVFGVVWIIMNYAMENNLT----LTFGYVVIILRFFTITGKHATLKMLMQTVFVSMYKSFFIILGMFLLITCYALVGVILFGSVKYGEAINRQANFRTAMNGISMLFRIVT----GEDWNRVLHDSMLEPPYCTLKPDSNYWDNDCGNFVAXIAFFXRXNFYVIITY-IVLNLLVAIIMENFSLFYSNEEDALLSYADIRNFQNTWNIVDVNQRGMIPVRRVKFILRLLKGRLEV-DPQKDRLLFKHMCYELERLHNGD------DVTF-HDVLSMLS 1557 HSP 3 Score: 88.1965 bits (217), Expect = 1.504e-17 Identity = 143/655 (21.83%), Postives = 243/655 (37.10%), Query Frame = 0
Query: 928 FETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIK-------YFGNAWCWLD-----FVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPL------RAMAKLEGMKVVVNALIG-ALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAP------------------------------AEWVNSRVTFDNVATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWK------------PQAIIFGVITNKKFDMIVMGFIGLNML---TMMCDHYDQSVTWTFVLDN---LNLFFIVVFTTEMLLKMFALR-HHYFSEPWNLFDLVVV------LLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASED-------VQEGITD--EDYELFYEVWREFDPEGTQYMPYKQLP 1499
F PFL Y D I VF IE K+ S G Y + WC D F++++V L +F L +P + + LRA RPL R K K VN + + I+NV + L F ++ ++GV F C+ NT + + ++TI P E+ S T A+ +GW+ +M A D+ + + + YF I ++ N+ + VI + FNE + + T R+ IA+ + ++ + + WK I V+ + + + VM N + ++ H + N L F + + E++ K+F L Y + F+L++ +L + GLFLS I + ++ RV+RLIK + + ++ + L ++ + ++ I S M LF ++ F+TF F +FQI T W E S+ N I+ ILY + LI++++++AVIL+N E V+E +D ED L +V+ +F PE ++P
Sbjct: 61 FYNYPFLFYVTYTADLICVLVFTIEMVTKIHSRGLFTSSGGKKPYIKSRWCQFDSMMLFFIVISVILQSFEMFSL----VPRYSPLSMLRAARPLIMIRFIRVFLKFSMPKARVNQIFKRSSHQIYNVTIFFLFFMSLYGLLGVQFFGEINNHCV-RNTVTQAEDVTLNDLTIPDSYCNPHDGSGHKCPKGFHCMKLSPLGKVKTGFTGFGEFATSVFTVYQAASQEGWVYIMYRASDAAQNWKAAF---------YFTTMIFFLAWMVKNVFIAVITETFNEIRVQFQETWSD------RERIASSSQDPRRQQVLEGDQKAWKLVTVQENSHEGYAPEIFSKVLRSPAYHIFVMLITLANAIVTASISFQHTRDQRPREYFFSNQKILEFGFTLFYDLEVIFKVFCLSFKGYIQRTIHKFELLLAVFTTIHILPIRGLFLSWI--------------SIFQVLRVIRLIKASPMLEDFVYKIFGPGRKLGSLIIFTMCLLVITSSMSMQLF------CFLPNLDKFETFPFAFMSMFQILTQEAWPEVM-------------SKTMERVNPSLTFVVAIYFILYHLFVTLIVMSLFVAVILDNLELDEESKKVKQLKVREESSDIKEDLPLRLKVFEKF-PERPLMTRLHRIP 661 HSP 4 Score: 63.1586 bits (152), Expect = 6.459e-10 Identity = 126/628 (20.06%), Postives = 243/628 (38.69%), Query Frame = 0
Query: 174 DTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTI------LIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAE--------EEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIE------YHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELL----AENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFVAG-ITCVP----------YFLATV---------LIANLVILNLFLALLLSSFTDMGGNKAE 756
DT+ + VF E +K+ A G+++ ++D LD + +S V + + S L R FR L+ ++P ++ +V + K + V VL I L+ VFA G+ ++ G+ C +D+ + + G D +V + + P D C P G + NP +FDN G+S L F +++ W +L + + GP I+ +FLGS + L + +V +Y E + A + +K ++ + + + ++ +A + + HL F +AI+V T F +LC+ D N++ Y ++ L+ + T F +E F K+ A +P ++ D + V V ++ EN L+ +LR F + +L ++ + ++ + + ++I +A++G+ LFG + N + NF M+ ++FR++ GE W + D M T P F+A + +I ++LNL +A+++ +F+ N+ +
Sbjct: 907 DTKILQIMDYVFVIAMGGELTLKVLAEGMIFTPKALIKDVSGILDLSIFFVSLVWVCWMPEKIPANSSAQLLMLLRCFRPLRIFILVPHMRKVVCELCRGFKEIVLVGVLLIVLIFVFANYGVHLF-GMKFAAC----NDSYIKERSKCVGIFRADVYVTKMN---IPPKED----CP--------PPGLVVPRVWMNPRR--FNFDNIGTSMLALFEVLSFKGWVDLRDVIIGKMGPAYAIYIHMYVFLGSMIGLTLFVGVVIANYRENKGTALLTVDQMRWSDLKKXLKIAQPLHVPPKPENSKFQAFIYDIIQHLYFKRF-----------------------IAILV---LTNSF-LLCVKWKEEDDAPDRINLDSNGTVIYEEDDTNKTTLRDRLSTASSALTICFVIEVFMKMIAFTPYGYWQSRRXRGDLFVTVFGVVWIIMNYAMENNLTLTFGYVVIILRFFTITGKHATLKMLMQTVFVSMYKSFFIILGMFLLITCYALVGVILFGSVKYGEAINRQ-------ANFRTAMNGISMLFRIVTGEDWNRVLHDSMLEPPYCTLKPDSNYWDNDCGNFVAXIAFFXRXNFYVIITYIVLNLLVAIIMENFSLFYSNEED 1478
BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Match: gi|116453|sp|P15390.1|SCN4A_RAT (RecName: Full=Sodium channel protein type 4 subunit alpha; AltName: Full=Mu-1; AltName: Full=SkM1; AltName: Full=Sodium channel protein skeletal muscle subunit alpha; AltName: Full=Sodium channel protein type IV subunit alpha; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.4) HSP 1 Score: 1330.47 bits (3442), Expect = 0.000e+0 Identity = 765/1771 (43.20%), Postives = 1050/1771 (59.29%), Query Frame = 0
Query: 10 APPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDT-EYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKD-----------FHDNVLFQNMT--------------------TNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQ--------------RQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSL---LDFSLLGGKDNKGFETDSFQSQVSE----------------------------------VLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAG-ITCVPYFLATVLIANLVILNLFLALLLSSFT-DMGGNKAEDHEKDKIQIAFERIGW-----------CFRG------------------GPFSKRNQEEKRKREALANSDDLDDSESMPNKDGYSDN-----------------YSKQDSIIGNGIDLGFSKGGLSDVYEE-------MGGSYDKTSETI----------------VYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREI--GAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSP-----GNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
P RPFT E L IE R ++ E++ Q N ++ +IEE E + P + LE G +LP YGD P E+ +P+ D+DPYY DK+TF+V++KG AI+RFSA AL+ LSPF +RR+A+ VL H LFSMFI+ TIL NC M + ++ E FT IYT+ES IK+ ARG D FT+LRD WNWLDF VI M+YVT +DLG+ SALRTFRV RALK++ VIPGLKTIV A++ SVK L DV++LT+F L+VFAL+GLQ++MG L Q CV+ + ++ + N T N +W+ ++N+E N+Y ++ +LCGNSS AG CP+G+ C+K G NPNYGYTS+D F ++L FRLMTQDYWENL+Q+TLR AG +IFF+ IFLGSFYLINLILA+VAM+Y E +Q E+ +K EELE + A+ A+ E A + + LD S G DS S E ++ +IV DPF +L I +CI +N FM ++HY + H F ++L+ GN FT IF E KL AM P +F GWNIFD IV LS VEL N+ GLS+LRSFRLLRVFKLAKSW +LN ++ I+GN++GAL NLT VL II+FIFAV+GMQLFG+SY E VC C LPRW+ DF HSF+IVFR+LCGEWIE+MWDCM VAG C+ FL ++I NLV+LNLFLALLLSSF+ D ED E + +QIA RI W RG G ++ + E K+E +L D+ + N G +D + Q I DL +D + E + YD S NP E E+C + P + + ++W R +++E+ +FE+ ++ +IL+SS + EDI+ E + + L Y D++ T +F +E +K + GF YF NAWCWLDF+IV VS+I+ A+ LG + K++RTLRALRPLRA+++ EGM+VVVNAL+GA+PSI NVL+VCLIFWLIF+I+GVN G++Y C+++ T +R+ V+ N + + W+N +V +DNV AT+KGW+D+M A+DS E+ +QP+ E N+YMY+YFV+FI+ GSFFTLNL +GVIID FN+QK K G D FMTE+Q+KY AMKK +KKP K +PRP K Q +++ +T + FD+ +M I LNM+TMM + DQS +L N+N+ FI++FT E +LKMFALRH+YF+ WN+FD VVV+LS+ GL LSD+I+KYFVSPTL RV+R+A+IGRVLRLI+GA+GIRTLLF+L+M+ PAL NI LLLFLVMFI+S+FGMS F VK +G DD+ NF+TF + LF+I TSAGW I N D D L +P G+CG+ + F Y++++FLI++NMYIA+ILEN++ A+E+ E ++++D+E+FYE W +FDP+ TQ++ Y +L +F+D L+ PL+I KPNK K+I +D+P+V D + C DIL LT++ G +E + + YE +++++ +++E CA IQR+++ H
Sbjct: 13 GPHCLRPFTPESLAAIEQRAVEE-------EARLQRNKQM---------------EIEEPERK---PRSDLEAGKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYLLSPFSIVRRVAIKVLIHALFSMFIMITILTNCVFMTMSNPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNDTNTTWYGNDTWYSNDTWYGNDTWYINDTWNSQESWAGNSTFDWEAYINDEGNFYFLEGSNDALLCGNSSDAGHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKYKKHQEELEKAKAAQ--ALESGEEADGDPTHNKDCNGSLDASGEKGPPRPSCSADSAISDAMEELEEAHQKCPPWWYKCAHKVLIWNCCAPWVKFKHIIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEH--------FDNVLSVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIASDCNLPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKTFLLGLLRGKILSPKEIILSLGEPGGAGENAEESTPEDEKKEPPPEDKELKDNHIL-NHVGLTDGPRSSIELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDAFSEPEDIKKPLQPLYDGNSSVCSTADYKPPEEDPEEQAEENPEGEQ-PEECFTEACVKRCPCLYVDISQGRGKMWWTLRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTSERFDISVVNNKSESESLMYTGQVRWMNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPHYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGK-DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDISIMILICLNMVTMMVETDDQSQLKVDILYNINMVFIIIFTGECVLKMFALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDC-DPTLENPGTNVRGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLSEDDFEMFYETWEKFDPDATQFIDYSRLSDFVDTLQEPLKIAKPNKIKLITLDLPMVP----------GDKIHCLDILFALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRH 1734
BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Match: gi|123916267|sp|Q2XVR6.1|SC4AB_TAKRU (RecName: Full=Sodium channel protein type 4 subunit alpha B; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.4b) HSP 1 Score: 1301.96 bits (3368), Expect = 0.000e+0 Identity = 746/1696 (43.99%), Postives = 1032/1696 (60.85%), Query Frame = 0
Query: 11 PPT----FRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDT-EYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICV---KDFHDNVLFQNMTTNG----------------DLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETD---------SFQS------------QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGIT-CVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFERIGWCFRGGPFSKR-------NQEEKRKREALANSDDLDDSESMPNKDGYSDNYSKQDSIIGNGIDLGFSKGGLSDV----------------YEEMGGSYDKTSETIVYNPTDEVLVE----DCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTIC----REIGAPAEWVNSRVTFDN----------VATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNE-DNCDAPDSELGSP--GNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTT----FADRP---GYERVSSSVWKQRESYCASLIQRSFKYH 1609
PP FR FT+ L I+ + Q +++ +K+ ++ E E+ EP++ LE G LP YG+ P EL NVP+ DIDP+Y+ ++TF+V+SKG IYRF+A ++L+ LSPF+ +R +A+ +L H LFS+FI+ TIL NC M D ++ + E VFT IYT+E+ IK+ +RG +FT+L+D WNWLDF+VI+M+Y+T L+DLG+ S LRTFRV RALK++ VIPGLKTIV A++ SV+ L D +VLT+F L+VFAL+GLQ++MG L Q CV + + N+ F +TNG + ++R +NN N+Y +LCGNSS AGVCP+ + CLK G NPNYGYTS+D+FG ++L FRLMTQD+WENL+Q+TLRTAG +IFF+ IFLGSFYLINLILA+VAM+Y E Q E + E+ E EA E AA H ++ +GFE D +F + + E L IV DPF +L I +CI +N FM ++HY MS F LL+ GN FT IF E K+ AM P ++F GWNIFD +IV +S VEL N+ GLS+LRSFRL+RVFKLAKSW +LN ++ I+GN++GAL NLT VL II+FIFAV+GMQLFG++Y + VC CVLPRW+ DF H+F+I+FRVLCGEWIESMWDCM V+G T C+ F+ ++I NLV+LNLFLALLLSSF+ +D ++ +QIA RI R ++K E + A S DD E KD + D ++ + F + +++ +E + DE V DC Y PF + + ++W R ++EN YFES ++ +IL+SS + EDI+ E + L Y D++ T VF +E +K F+ GF YF NAWCWLDF+IV VSL++ A++LG + K++RTLRALRPLRA+++ EGM+VVVNAL+GA+PSIFNVL+VCLIFWLIF+I+GVN G++ C + + + +V+ N T C + W N +V +DN VAT+KGW D+M A+DS + QP E N+YMY+YFV+FI+ GSFFTLNL +GVIID FN+QK K G D FMTE+Q+KY AMKK +KKP K +PRP Q ++F ++T + FD+ +M I LNM+TMM + +QS VL +N+ FI++FTTE LK+ ALR HYFS WN+FD VVV+LS+ GL L+DIIEKYFVSPTL RV+R+A+IGRVLRLI+GA+GIRTLLF+L+M+ PAL NI LLLFL+MFIFS+FGMS F VK DD+ NF+TF + LF I TSAGW I N +CD G+ GNCGS + F Y++++FL+++NM+IA+ILEN++ A+E+ + + ++D+E+FYE W +FDP+ +Q++ Y +L +F D L+ PL+I +PN K+I MD+P+V D + C DIL LT + DS ++ +K T A+ P YE +SS++ ++ E A++IQR+++ +
Sbjct: 6 PPVGSEVFRRFTQSSLNEIQQKQQIREEERKRTNAQVSE--------------------------ELPEPASDLEAGKPLPFIYGEPPHELLNVPLEDIDPFYQSQKTFIVLSKGNIIYRFNAESSLYLLSPFNALRIVAIKILIHSLFSLFIMATILTNCAFMTLSDPPAWSKTMEYVFTFIYTFEATIKILSRGFCVGKFTFLKDPWNWLDFMVISMAYLTELVDLGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQSVRKLADAMVLTVFCLSVFALIGLQLFMGNLRQKCVLIPQWLYGNLTFDINSTNGYYGNDTHDNGTKSKHLEFEFERHINNPDNYYYLTGQGDPLLCGNSSDAGVCPESYVCLKVGANPNYGYTSYDSFGWAFLALFRLMTQDFWENLFQLTLRTAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAE---QNEATLAEAKEKEEEYIHILEALKKREEEQAARKEPHSTV-----------EGFEDDHRLCPPCWYAFANIFLKWDCCGCWRHLKECLYAIVMDPFVDLGITICIILNTVFMAMEHY--------PMSADFEELLSVGNLVFTGIFTGEMVFKILAMDPYFYFQVGWNIFDSIIVTISLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCRISEDCVLPRWHMNDFFHAFLIIFRVLCGEWIESMWDCMEVSGQTMCLIVFMMVLVIGNLVVLNLFLALLLSSFSGDNLTTQDDEGENNLQIAINRIN---RAMSWTKTYILLYVYTLTESNLNQHFAVS---DDEEQRRVKDILALTSVSSDKLVSHHCGNDFFRVPIAEAESDSDDSDYDEDKDSQCDESSVCSSVQKPEVQEEEMDENCVAKTPTDCWTKKCYSRCPFLDIDTSQGRGKIWCNIRRTCFSIVENNYFESFIVFMILLSSGALAFEDIYLEKHQLIKSILEYADKVFTYVFVMEMVLKWFAYGFKSYFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFSYCFNETSQEIIDTKVVDNKTECIALIKANFTEVRWKNVKVNYDNVGIGYLSLLQVATFKGWTDIMYAAVDSRDVESQPIYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGQ-DIFMTEEQKKYYNAMKKLGSKKPQKPVPRPENPFQGLVFDLVTKQIFDVFIMVLICLNMVTMMVETDEQSDKKEEVLYWINVVFILIFTTECTLKIIALRRHYFSIGWNIFDFVVVILSILGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEALIDDMFNFETFGNSMICLFMITTSAGWDGLLSPIMNTPPDCDPNVENPGTTVRGNCGSPAIGIAFFSTYIIMSFLVVVNMFIAIILENFNVATEESSDPLCEDDFEMFYETWEKFDPDASQFIQYSKLSDFCDTLKEPLRIPQPNTIKLISMDLPLVP----------GDRIHCMDILLALTAEVLG-------DSDEMDTLKATMEEKFMANNPSKVSYEPISSTLLRKEEEVAATVIQRAYRKY 1629
BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Match: gi|123898107|sp|Q2XVR4.1|SC4AB_TETNG (RecName: Full=Sodium channel protein type 4 subunit alpha B; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.4b) HSP 1 Score: 1296.95 bits (3355), Expect = 0.000e+0 Identity = 744/1689 (44.05%), Postives = 1038/1689 (61.46%), Query Frame = 0
Query: 11 PPT----FRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDT-EYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICV-----------------KDFHDNVLFQNMTTNGDL--NWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEE----LEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNK--------------GFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGIT-CVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFERIGWCFRGGPFSKR---------NQEEKRKREALANSDDLDDSESMPNKDGYSDNYSKQDSIIGNGIDLGFSKGGLSDVYEEMGGSYDKTSET----------IVYNPTDEVLVE----DCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREI----GAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNE-DNCDAPDSELGSP--GNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTT----FADRP---GYERVSSSVWKQRESYCASLIQRSFKYH 1609
PP FR FT L I+ R QQ K+ +K+ ++ E +LF EP++ LE G LP YG+ P EL NVP+ D+DP+Y+ ++TF+V+SKG I+RF+A ++L+ LSPF+ +R A+ +L H LFS+FI+ TIL NC M D ++ + E VFT IYT+E+ IK+ +RG +FT+L+D WNWLDF+VI+M+Y+T L+DLG+ S LRTFRV RALK++ VIPGLKTIV A++ SVK L D +VLT+F L+VFAL+GLQ++MG L Q CV + N N T N DL ++ +NN N+Y +LCGNSS AGVCP+ + CLK G NPNYGYTS+D+FG ++L FRLMTQD+WENL+Q+TLR AG +IFF+ IFLGSFYLINLILA+VAM+Y E + EA+++ EE LEA++ EE +AA EA+ +F D+K ++ S + L+ IV DPF +L I +CI +N FM ++HY MS F LL+ GN FT IF E K+ AM P ++F GWNIFD +IV +S VEL N+ GLS+LRSFRL+RVFKLAKSW +LN ++ I+GN++GAL NLT VL II+FIFAV+GMQLFG++Y + VC C LPRW+ DF H+F+I+FRVLCGEWI++MWDCM V+G T C+ ++ ++I NLV+LNLFLALLLSSF+ +D ++ +QIA RI R ++K + + +A++ D+ E+ K+ + D I S SD + + + E+ + N DE V DC Y P + + +VW R ++EN YFES ++ +IL+SS + EDI+ E + L Y D++ T VF +E +K F+ GF YF NAWCWLDF+IV VSL++ A++LG + K++RTLRALRPLRA+++ EGM+VVVNAL+GA+PSIFNVL+VCLIFWLIF+I+GVN G++ C + + +++ +++ N T C + W N +V +DNV AT+KGW+++M A+DS + QP E NIYMY+YFV+FI+ GSFFTLNL +GVIID FN+QK K G D FMTE+Q+KY AMKK +KKP K +PRP Q ++F ++T + FD+ +M I LNM+TMM + +Q+ +L +N+ FIV+FTTE +LK ALR HYFS WN+FD VVV+LS+ GL L+DIIEKYFVSPTL RV+R+A+IGRVLRLI+GA+GIRTLLF+L+M+ PAL NI LLLFL+MFIFS+FGMS F VK DD+ NF+TF + LF I TSAGW I N+ +CD G+ GNCGS ++F Y++++FL+++NMYIA+ILEN++ A+E+ + + ++D+++FYE W +FDP+ TQ++ Y +L +F D L+ PL+I KPN K+I +D+P+V D + C DIL LT + DS ++ +K T A+ P YE +SS++ ++ E A +IQR+++ +
Sbjct: 6 PPVGSEVFRRFTPSSLNEIQQR-QQIKEERKRANAEVSE--ELFS-----------------------EPASDLEAGKPLPFIYGEPPHELLNVPLEDMDPFYQSQKTFIVLSKGNVIHRFNAESSLYLLSPFNSMRIFAIKILVHSLFSLFIMATILTNCVFMTLSDPPAWSKTVEYVFTFIYTFEATIKVVSRGFCVGQFTFLKDPWNWLDFMVISMAYLTELVDLGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADAMVLTVFCLSVFALIGLQLFMGNLRQKCVLIPPVVSNLTFEVTNSSHGYFGNDTRGNDTENKDLMFEFEEHINNPDNYYYLAGQRDPLLCGNSSDAGVCPESYICLKVGRNPNYGYTSYDSFGWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNQATMAEAKQKEEEYLHILEALKKREEE-----QAAWKEALKVQEPHNFE----DDHKLCPPCWYAFANVFLKWDCCSCWRHLKRCLSAIVMDPFVDLGITICIILNTIFMAMEHY--------PMSADFEELLSVGNLVFTGIFTCEMVLKILAMDPYFYFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCRISEDCKLPRWHMNDFFHAFLIIFRVLCGEWIDTMWDCMEVSGQTMCLIVYMMVLVIGNLVVLNLFLALLLSSFSGDNLAAQDDEGENNLQIAVNRIK---RAVAWAKTWILLHLCILTESNHNQHDAVS-----DEEENRITKNILALTSVTSDQFFKVPIAEAESDSEDSDDDDVDEDKHSRCDESSFCSTVQDPEVKENEADEDNVSKMPMDCWSENCYSRCPSLDIDTSQGKGKVWCNIRRACFIIVENNYFESFIVFMILLSSGALAFEDIYLEKHQLIKTILEYADKVFTYVFVVEMVLKWFAYGFKSYFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFSYCFNETSQEQFDKKIVNNKTECIALIEANFTEVRWKNLKVNYDNVGIGYLSLLQVATFKGWMEIMYAAVDSRDVESQPIYEVNIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGQ-DIFMTEEQKKYYNAMKKLGSKKPQKPVPRPENALQGLVFDLVTKQIFDVFIMVLICLNMVTMMVETDEQTKEKEDILYWINVIFIVIFTTECILKTIALRRHYFSIGWNVFDFVVVILSILGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAMIDDMFNFETFGNSMICLFMITTSAGWDGLLSPIMNKPPDCDPDLENPGTTVRGNCGSPAIGIVFFSTYIIMSFLVVVNMYIAIILENFNVATEESSDPLCEDDFDMFYETWEKFDPDATQFIQYSKLSDFCDTLKEPLRIPKPNTIKLISLDLPLVP----------GDKIHCMDILLALTAEVLG-------DSDEMDTLKATMEEKFMANNPSKVSYEPISSTLRRKEEEVAARVIQRAYRKY 1625
BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Match: gi|1191692602|sp|D0E0C2.1|SCNA1_PERAM (RecName: Full=Sodium channel protein PaFPC1; Short=PaFPC1; AltName: Full=NavPaS) HSP 1 Score: 1267.68 bits (3279), Expect = 0.000e+0 Identity = 698/1640 (42.56%), Postives = 1018/1640 (62.07%), Query Frame = 0
Query: 14 FRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGD-FPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEME---ELEAIQCAEEAA----MTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETD--SFQSQVSEVLAI----------------IVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCN-PKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFERIGWCFRGGPFSKRNQEEKRKREALANSDDLDDSESMPNKDGYSDNYSKQDSIIGNGIDLGFSKGGLSDVYEEMGGSYDKTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNK--GGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQID----DSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
FRP+TR L + Q K+N K E+K +N + G GA +D D P LEQGS LP R + FP ELA+ P+ D DP+Y++K+TF+VV+K G I+RFS +L+ L PF PIRR+A+ + P+FS FI+ TIL++C MI T+ T E+VF +IYT E +K+ ARG + F YLRD WNWLDFLV + Y+T+++DLG ALR FRV R+ ++V ++PG +TIV A+ S+ +L+D+++L +F L VFA+LGLQIYMGVL+Q CVK F + + N T D W + +N S+WY+ + LCGNSSGAG+CP G+TCL+G G NPNYGYTSFD FG ++L FRL+T DYWE+LYQ+ LR+AGPW+I+FFI +F G+F +N ILA+V MSY + ++A+EE E E E +A A A T E EAV ++D + + ET S ++++ L + +V PF ELFI + I +N+ FM LDH HD M+ F +L GNY FT+I+ +E+ K+ A+SP+++F D WN+FDF+IVV + +EL E + GLS+ RSFRLLRVF+LAK W +LN+ +++M + GA N+ +V+ +++FIFA++GMQLFG +Y++ + P LPRWNFTDF+HSFMIVFR LCGEWIESMWDCM V +C+P+F+A + NLVILNL +ALLL+++ + D E K + A +I F+ K N + +S+D+ +S+ I GN I +D + + G + DCC N Y+ P + + ++WS R + L +NKYF+ V +++++S ++ LEDI+ +P L++ Y+D +LT F IE I LF++GF KYF + W WLDF++V L+NF +L I +T+R LR R R ++K+ GM+VV + L+ A+P IFNV++V + FWL+FAI+GV G++YKC+D N+ SHE+ + C + W NS + FD+V AT+KGW+ +MNDAIDS E +QP RETNIYMY+YF+ FIV GSFF L L V ++ID F +Q+ K G S DS Q Y A+ + + KP+K +P+P PQ++++ + N+KF+ +M I LN+ M DHY QS+ ++ VLD LNL FI++F E ++K+ LRHHYF +PWN+ D + V+L++AGL LSD+IEKYF+SPTLLR++R+ ++GR+LR + ARG+R LL +L A L N++ LLF++MF+++VFGM F +++ DDV+NF+TF ++ LLFQ+ TSAGW + AI+NE++C APD ELG PGNCGS + +++ YL++T L++INMY AVIL+ + ED +EG+TD+DY++F+EVW++FDPE TQY+ Y QL E L+ L+PPLQ++KPNK+KI+ M+IPI + +D +F D+L+ L +D F+R+G+ ++ +P++ D Y+ VSS++ +QRE YC LIQ +++ H
Sbjct: 16 FRPYTRAMLTAPSA--QPAKENGKTEENK--DNSRDKGRGA------NKDRDGSAH------PDQALEQGSRLPARMRNIFPAELASTPLEDFDPFYKNKKTFVVVTKAGDIFRFSGEKSLWMLDPFTPIRRVAISTMVQPIFSYFIMITILIHCIFMIMPATQTTYILELVFLSIYTIEVVVKVLARGFILHPFAYLRDPWNWLDFLVTLIGYITLVVDLGHLYALRAFRVLRSWRTVTIVPGWRTIVDALSLSITSLKDLVLLLLFSLFVFAVLGLQIYMGVLTQKCVKHFPADGSWGNFT---DERWFNYTSNSSHWYIPDDWIEYPLCGNSSGAGMCPPGYTCLQGYGGNPNYGYTSFDTFGWAFLSVFRLVTLDYWEDLYQLALRSAGPWHILFFIIVVFYGTFCFLNFILAVVVMSYTHMVKRADEEKAAERELKKEKKAASVANNTANGQEQTTIEMNGDEAV----VIDNNDQAARQQSDPETPAPSVTQRLTDFLCVWDCCVPWQKLQGAIGAVVLSPFFELFIAVIIVLNITFMALDH-----HD---MNIEFERILRTGNYIFTSIYIVEAVLKIIALSPKFYFKDSWNVFDFIIVVFAILELGLEGVQGLSVFRSFRLLRVFRLAKFWPTLNNFMSVMTKSYGAFVNVMYVMFLLLFIFAIIGMQLFGMNYIDNMERFPDGD--LPRWNFTDFLHSFMIVFRALCGEWIESMWDCMLVGDWSCIPFFVAVFFVGNLVILNLLIALLLNNYGSFCTSPTSDEEDSKDEDALAQIVRIFKR---FKPNLNAVKLSPMKPDSEDIVESQE----------------IQGNNI---------ADAEDVLAGEFPP----------------DCCCNAFYKCFP-SRPARDSSVQRMWSNIRRVCFLLAKNKYFQKFVTAVLVITSVLLALEDIYLPQRPVLVNITLYVDYVLTAFFVIEMIIMLFAVGFKKYFTSKWYWLDFIVVVAYLLNF---VLMCAGIEALQTLRLLRVFRLFRPLSKVNGMQVVTSTLVEAVPHIFNVILVGIFFWLVFAIMGVQLFAGKFYKCVDENS-TVLSHEITMDRNDC--LHENYTWENSPMNFDHVGNAYLSLLQVATFKGWLQIMNDAIDSREVHKQPIRETNIYMYLYFIFFIVFGSFFILKLFVCILIDIFRQQRRKAEGLSATDS---RTQLIYRRAVMRTMSAKPVKRIPKPTCHPQSLMYDISVNRKFEYTMMILIILNVAVMAIDHYGQSMEFSEVLDYLNLIFIIIFFVECVIKVSGLRHHYFKDPWNIIDFLYVVLAIAGLMLSDVIEKYFISPTLLRILRILRVGRLLRYFQSARGMRLLLLALRKALRTLFNVSFLLFVIMFVYAVFGMEFFMHIRDAGAIDDVYNFKTFGQSIILLFQLATSAGWDGVYFAIANEEDCRAPDHELGYPGNCGSRALGIAYLVSYLIITCLVVINMYAAVILDYVLEVYEDSKEGLTDDDYDMFFEVWQQFDPEATQYIRYDQLSELLEALQPPLQVQKPNKYKILSMNIPICK----------DDHIFYKDVLEALVKDVFSRRGSPVEAGDVQAPNV---------DEAEYKPVSSTLQRQREEYCVRLIQNAWRKH 1549
BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Match: gi|729137|sp|Q05973.1|SCN1_HETBL (RecName: Full=Sodium channel protein 1 brain; AltName: Full=Sodium channel protein I brain) HSP 1 Score: 1006.51 bits (2601), Expect = 0.000e+0 Identity = 610/1551 (39.33%), Postives = 906/1551 (58.41%), Query Frame = 0
Query: 110 RDKRTFMVVSK---GGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILID------LGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEA----AAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFERIGWCFRGGPFSKRNQEEKRKREALANSDDLDD---------SESMPNKDGYSDNYSKQDSIIGNGI--DLGFSKGGLSDVYEEMGGSYDKTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDN----------VATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNK-GGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDII-EKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLA-ISNEDNCDAPDSELGSP--------GNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTT-------FADRPGYERVSSSVWKQRESYCASLIQRSFK 1607
RDK TF+V+ K I+RFSA +LF +P +PIRR+A+ + T+ F F++FTI++NC + D A E +F IYT E AIKL A G D++TYLRDAWN LDF VI +SY+T+L+ + + LRTFRV RAL+++++IPGLKT+V+A++ +++ L V++L +F L +F+ G+Q++ G L CV H + F D + + N NW ++ N + VLCGN++GAG CP +TCL G NPNYGYT+FD+ G S L +F+L+TQDYWE++Y +R PW +I+FI F GS YL+NL+LA+VA +Y EL+ + K++++ A A E ++ E E +EA +H+ + + + +V I+ D FTE+FII I +N F+ ++H+ GMS ++L NY FT +F LE+ KL A + +YF GWNI D V+VV S ++L E + G+S+ RSFRLLRVF LA+SW ++ +L I+ NT+G+L LT +L I+I+IFAV G+QLF Y + +PRWNF DF+HSFM+VFR+LCGEWIE M+DCM C F+ + + LF+ L+L +F G+ + E + A GP SK R+R A D++ D SE +D SK I+ N D S G L + + M GS + I + + ++ C P F+ + + + W+ R + ENKYFE+ VLV+I SS ++ EDI+ KP L A++YLD +FF+E +KL ++GF+ Y+ + W LDF IV +++I+ AS LG I F+++RTLRALRPLRA+++ +GMK++VNAL+ ++PSIFNVL+VC++FWLIFAI+GV G++YKC++ T R + N C WVNS V FDN VAT++GW+++M DA+D E +QP E +Y Y YFVLFI+ GSFF LNL++GVIIDKF+ K K G+ LD F+T Q+ Y +KK TKKP K + RP K QA+++ ++ + +F++ + I NM+ M +HY+QS T VL N+ F +++ E ++K+ LR HY WN+FD +VV LS+ FL+DI + F++P+LLRV R+ +IGR++RLIK A+G+R LLF+LV++ PAL NI LL LVMFI+++ GMS F +K++ +D NFQTF KTF LL ++ TSAGW + + NCD P+ S G+CG A+ +M+ Y+++ F+I+ NMYIAVILEN++QA + GIT++D ++FY VW ++DP TQ++ ++QL +F+ L+PPL+++KPN I D+PIV+ G + C DIL L + FA GN ++++ + V+ F R E +S++ +RE A +QR++K
Sbjct: 10 RDK-TFVVIEKRFKKNIIHRFSAKRSLFLFTPRNPIRRLAVCIATNVCFDYFLMFTIMINCVFLAMPDISEFA--EYIFLGIYTMEMAIKLVAGGFFIDKYTYLRDAWNCLDFTVIMISYITLLLQTINDKVISDITGLRTFRVLRALRTLSIIPGLKTMVNALLRALRMLISVLILILFCLWIFSQAGVQLFGGALRHKCVLQIHGSPAFGKTY---DEFYAEHIENSDNW-LAKGNGEYVLCGNATGAGPCPTNYTCLPDIGENPNYGYTNFDSIGWSMLISFQLLTQDYWEDVYNKVIRAHSPWTVIYFIVINFFGSLYLMNLMLAVVATAY-ELEVK---NTGKKLQQTAA--TAREQSLKEQERRNTLTVSEADSHVDDRNCTCCEQCCGCCYNP---WLRVQSFAHCIITDSFTEVFIIFIIVLNTVFLAMEHH--------GMSMELKNVLKVANYVFTTVFVLEAILKLLAFNKQYF-KSGWNICDLVVVVASLIDLGVEGLKGVSVFRSFRLLRVFHLAQSWTTMRLLLCIILNTLGSLGYLTIILIIVIYIFAVTGLQLFHTEYTPDKFRGE---PVPRWNFNDFLHSFMMVFRILCGEWIEPMYDCMRACNGLCFLIFIPVTVFGKTLFF-LFIGLVLGAF----GSDTVEQEVEVSSFALP--------GPESK--PCSVRERGISATDDNVKDDGQDEVQQNSEETKIDLRNNDKQSKDGMILENNCNNDSLASLGSLGSIPDIMDGS--SVEDDI--SSCQQKDIQPCLPLFISSRFKCLREFDDTSHGKKWNNFRRQLMMVCENKYFETGVLVIIFASSILLAFEDIYLNEKPRLKLAIFYLDITFCLLFFLEMVLKLVALGFVHYYTHFWTILDFTIVIITVISLAASGLGMEQITAFRSLRTLRALRPLRAVSRWQGMKIIVNALMLSIPSIFNVLLVCVVFWLIFAIMGVQLFAGKFYKCVNE-TNMRIPPTEVANKIEC--YNKNYTWVNSNVNFDNVGGAFLALFQVATFEGWMEIMADAVDVTEVDEQPKFEATVYYYFYFVLFIIFGSFFVLNLVIGVIIDKFSFLKKKYDGTYLDMFLTPTQQNYYNTLKKLGTKKPQKTVKRPKNKCQAVVYDLVMSNQFEIFITTIIITNMIFMAFEHYNQSEVVTEVLATANIAFTILYAVEAIIKIIGLRIHYLRNLWNVFDFLVVTLSVMDAFLNDIFGDGIFMNPSLLRVARMFRIGRIIRLIKWAKGMRKLLFALVISLPALFNIGALLMLVMFIYTIIGMSSFGQIKLSGALNDQVNFQTFGKTFLLLVRLATSAGWNDILGPLLIQPPNCD-PNYITTSTGEKIKVVNGDCGMPWLAISYMVSYIIIVFMIVFNMYIAVILENFNQAHAQEEVGITEDDLDMFYGVWEQYDPLATQFIKHEQLSDFIQDLDPPLKVKKPNNVAIATFDLPIVK-----GGH-----IHCLDILLALVK--FALGGN-LEETEAFKRVRTQMEARFDEIFPTREKSEIRTSTLQMRREEMAARTLQRAWK 1496
BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Match: gi|150421666|sp|P35500.3|SCNA_DROME (RecName: Full=Sodium channel protein para; AltName: Full=Protein paralytic; AltName: Full=Sodium channel 1; Short=DmNav1) HSP 1 Score: 974.156 bits (2517), Expect = 0.000e+0 Identity = 473/775 (61.03%), Postives = 588/775 (75.87%), Query Frame = 0
Query: 850 SETIVYNPTDEVLVE---DCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYHAS 1611
+ I++ +++L E DCCP+ Y+ P G+ + PFWQ W RL QLIENKYFE+ V+ +IL+SS + LED+ +P L D LYY+DRI T +FF+E IK ++GF YF NAWCWLDFVIV VSLINF ASL+GAG I FKTMRTLRALRPLRAM++++GM+VVVNAL+ A+PSIFNVL+VCLIFWLIFAI+GV G+Y+KC D N G + SHE+IPN C WVNS + FD+V AT+KGWI +MNDAIDS E +QP RETNIYMY+YFV FI+ GSFFTLNL +GVIID FNEQK K G +L+ FMTEDQ+KY AMKK +KKPLKA+PRP W+PQAI+F ++T+KKFD+I+M FIGLNM TM D YD S T+ VLD LN F+V+F++E LLK+FALR+HYF EPWNLFD+VVV+LS+ GL LSDIIEKYFVSPTLLRVVRVAK+GRVLRL+KGA+GIRTLLF+L M+ PAL NI LLLFLVMFIF++FGMS F +VK +G +DV+NF+TF ++ LLFQ+ TSAGW AI NE+ CD PD++ G PGNCGS + F++ YLV++FLI+INMYIAVILENYSQA+EDVQEG+TD+DY+++YE+W++FDPEGTQY+ Y QL EFLDVLEPPLQI KPNK+KII MDIPI R D ++C DILD LT+DFFARKGN I+++ I + D GYE VSS++W+QRE YCA LIQ +++ H +
Sbjct: 1244 GDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMN-GTKLSHEIIPNRNACES--ENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICR----------GDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAAR--PDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKA 2003 HSP 2 Score: 504.212 bits (1297), Expect = 1.815e-147 Identity = 256/428 (59.81%), Postives = 319/428 (74.53%), Query Frame = 0
Query: 14 FRPFTREELQIIESRIQQKKDNKKKRESKRQEN-IKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLP-RRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQ 438
FRPFTRE L IE RI + + +K+ E KR E + +G R ++ E D +E+E E +P LEQG +P R G FP ELA+ P+ DIDPYY + TF+VVSKG I+RFSA A++ L PF+PIRR+A+ +L HPLFS+FII TIL+NC +MI T STEV+FT IYT+ESA+K+ ARG + FTYLRDAWNWLDF+VIA++YVT+ IDLG+ +ALRTFRV RALK+VA++PGLKTIV A++ SVKNLRDVI+LT+F L+VFAL+GLQIYMGVL+Q C+K F + + N+T D NWD N SNWY LCGN SGAG C D + CL+G GPNPNYGYTSFD+FG ++L AFRLMTQD+WE+LYQ+ LR AGPW+++FFI IFLGSFYL+NLILAIVAMSYDELQ
Sbjct: 16 FRPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVPQYG---RKKKQKEIRYD-DEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPYYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLT---DENWDYHNRNSSNWYSEDEGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQ 436 HSP 3 Score: 298.901 bits (764), Expect = 1.624e-80 Identity = 174/285 (61.05%), Postives = 213/285 (74.74%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVE-KVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMG-GNKAEDHEKDKIQIAFERIGWCFRGGPFSKRN 783
+ E +++IVFDPF ELFI LCI VN FM +DH++ M+ +L +GNYFFTA FA+E+ KL AMSP+Y+F +GWNIFDF+IV LS +EL E + GLS+LRSFRLLRVFKLAKSW +LN +++IMG T+GAL NLTFVLCIIIFIFAVMGMQLFG++Y + K P LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCM+V ++C+P+FLATV+I NLV+LNLFLALLLS+F D++ +KI AF RIG R + KRN
Sbjct: 806 KFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD--------MNKEMERVLKSGNYFFTATFAIEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGD--LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIG---RFKSWVKRN 1077 HSP 4 Score: 147.132 bits (370), Expect = 5.793e-34 Identity = 142/634 (22.40%), Postives = 280/634 (44.16%), Query Frame = 0
Query: 184 VFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMS---YVTILIDLG---SFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDR---WVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYW----------ENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGI---TCVP-------------------YFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+FT I+ E IK A G Y +AW WLDF+++ +S +V L+ G +F +RT R R L++++ + G++ +V+A++ ++ ++ +V+++ + +FA++G+Q++ G + +D + L + N + WVN+ N FD+ G++YLC F++ T W + + +R + ++F+F I GSF+ +NL + ++ +++E +++A + E MTE + A+ + K K ++ Q ++ IV D ++ I+L I +N+ MTLD Y+ S + ++L N F IF+ E K+ A+ YF + WN+FD V+V+LS + L+ +I + L ++R ++ RV +L K K + +L + ++ AL N+ +L +++FIFA+ GM F + N +NF F S +++F++ + WD + A I C P + L+ ++I+ L+++N+++A++L +++ + E D + +E
Sbjct: 1341 IFTVIFFLEMLIKWLALGFK----VYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFK--CEDMNGTKLSHEIIPNRNACESENYTWVNSAMN-----------------------------------------FDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKA--------------GGSLEMFMTEDQKKYYNAMKKMG-------SKKPLKAIPRPRWRPQA--IVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYD--------ASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFI-EPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDV-------YNFKTFGQSMILLFQMST----SAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYE 1884 HSP 5 Score: 84.3445 bits (207), Expect = 8.455e-15 Identity = 74/317 (23.34%), Postives = 141/317 (44.48%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMG-RYYKCI--------------------DSNTGQRYSHEVIPNMTICREIGAPAEWVNSRV--------------TFDNVATWKGWI----------DVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNE 1161
R + ++ + F ++ ILV+ +M + T P + + I TG++ E+++K+ + GFI Y +AW WLDFV++A++ + G L GN+ +RT R LR L+ +A + G+K +V A+I ++ ++ +V+++ + +FA++G+ MG KCI + N+ YS + + +C I + + V +FD+ GW D D V R P+ ++F++ I LGSF+ +NL++ ++ ++E
Sbjct: 143 RRVAIYILVHPLFSLFIITTILVNCILMIMP-----TTP----TVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL---GNL---AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSF----GWAFLSAFRLMTQDFWEDLYQLVLRAAGPWH------MLFFIVIIFLGSFYLVNLILAIVAMSYDE 434 HSP 6 Score: 70.0922 bits (170), Expect = 1.707e-10 Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 0
Query: 1217 FDMIVMGFIGL----NMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALR-HHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLF-KNV-----KITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEA 1403
FD V FI L N + M DH+D + VL + N FF F E +K+ A+ +YF E WN+FD ++V LSL L L + L V+R ++ RV +L K + L+ + AL N+ +L +++FIF+V GM LF KN + G NF F +F ++F++ W E+
Sbjct: 816 FDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLELGLEGV--------QGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMIVFRVLCGE-WIES 1004 HSP 7 Score: 70.0922 bits (170), Expect = 1.736e-10 Identity = 56/237 (23.63%), Postives = 102/237 (43.04%), Query Frame = 0
Query: 547 PFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAE-----NISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVE-----------------KVCNPK-WKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFVAGITCVP----------YFLATVLIANLVILNLFLALLLSSFTD 749
P +L + FT IF LE K A+ + +FT+ W DFVIV++S + +A I +R+ R LR + + + ++ + I ++ N+ V I IFA+MG+QLF Y + C + + V NF ++++ +F+V + WI+ M D + + P YF+ ++ + LNLF+ +++ +F +
Sbjct: 1329 PILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNE 1565 HSP 8 Score: 68.1662 bits (165), Expect = 5.886e-10 Identity = 68/313 (21.73%), Postives = 126/313 (40.26%), Query Frame = 0
Query: 502 VSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIF---IFAVMGMQLFGQSYVEKV------------------------------------------------CNPKWKCVL-----PRWNFTDFMH---SFMIVFRVLCGEWIESMWDCMF-VAGITCVPYFLATVLIANLVILNLFLALLLSSFTDM 750
+ V I+ P LFII I VN M + T + + FT I+ ES K+ A + P + D WN DFV++ L++V + ++ L+ LR+FR+LR K L TI+G I ++ NL V+ + +F +FA+MG+Q++ +K C+ + C+ P + +T F +F+ FR++ ++ E ++ + AG + +F+ + + + ++NL LA++ S+ ++
Sbjct: 142 IRRVAIYILVHPLFSLFIITTILVNCILMIMPT---------------TPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM-GIDLGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDEL 435 HSP 9 Score: 60.077 bits (144), Expect = 1.563e-7 Identity = 62/257 (24.12%), Postives = 117/257 (45.53%), Query Frame = 0
Query: 80 LEQGSDLPRRYGDFPLELANVPICDID---PYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVV-------FTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILID-LGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRW 325
+EQ + R D + + P D D P ++DK V+ KG I F + + F + L++ P +FI I++N M + E V FTA + E+ +KL A + Y ++ WN DF+++A+S + + ++ + S LR+FR+ R K P L ++S + ++ L ++ + ++ +FA++G+Q++ K++HD+ ++ +GDL RW
Sbjct: 748 IEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTFKDK-ALEVILKG--IDVFCVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLMAMSPKY----YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFG--------KNYHDH---KDRFPDGDL--PRW 981
BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Match: gi|116449|sp|P08104.1|SCN3A_RAT (RecName: Full=Sodium channel protein type 3 subunit alpha; AltName: Full=Sodium channel protein brain III subunit alpha; AltName: Full=Sodium channel protein type III subunit alpha; AltName: Full=Voltage-gated sodium channel subtype III; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.3) HSP 1 Score: 946.421 bits (2445), Expect = 0.000e+0 Identity = 526/1187 (44.31%), Postives = 740/1187 (62.34%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGIT-CVPYFLATVLIANLVILNLFLALLLSSFTDMG-GNKAEDHEKDKIQIAFER-----------IGWCFRGGPFSKRN----QEEKRKREALANSDDLDDSESM-------PNKDGYSDNYSKQDSIIGNGIDLGFSKG-----------GLSDVYEEM-------------------------GGSYD----KTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNE--DNCDAPDSELGS--PGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
+V ++ +IV DPF +L I +CI +N FM ++HY M+ F+S+LT GN FT IF E K+ AM P Y+F +GWNIFD +IV LS +EL N+ GLS+LRSFRLLRVFKLAKSW +LN ++ I+GN++GAL NLT VL II+FIFAV+GMQLFG+SY E VC C LPRW+ DF HSF+IVFRVLCGEWIE+MWDCM VAG T C+ F+ ++I NLV+LNLFLALLLSSF+ +D+E + +QIA R I CFR F K QE + ++N+ ++ S+ + G S + +I + F G SD +E + G + D + E P +++ E C + PFCQ + EE ++W R ++E+ +FE+ ++ +IL+SS + EDI+ E + + L Y D++ T +F +E +K + GF YF NAWCWLDF+IV VSL++ A+ LG + K++RTLRALRPLRA+++ EGM+VVVNAL+GA+PSI NVL+VCLIFWLIF+I+GVN G++Y C+++ TG + + + N + C+ +G A W N +V FDNV AT+KGW+D+M A+DS + QP E N+YMY+YFV+FI+ GSFFTLNL +GVIID FN+QK K G D FMTE+Q+KY AMKK +KKP K +PRP K Q ++F +T + FD+ +M I LNM+TMM + DQS T VL +NL FIV+FT E LLK+ +LR++YF+ WN+FD VVV+LS+ G+FL+++IEKYFVSPTL RV+R+A+IGR+LRLIKGA+GIRTLLF+L+M+ PAL NI LLLFLVMFI+++FGMS F VK G DD+ NF+TF + LFQI TSAGW I N +CD GS G+CG+ + F + Y++++FL+++NMYIAVILEN+S A+E+ E ++++D+E+FYEVW +FDP+ TQ++ + +L +F L+PPL I KPNK ++I MD+P+V D + C DIL T+ G +E + + + YE +++++ +++E A++IQR+++ +
Sbjct: 699 KVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHY--------PMTQQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINVDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKNKIRECFRKAFFRKPKVIEIQEGNKIDSCMSNNTGIEISKELNYLKDGNGTTSGVGTGSSVEKYVIDENDYMSFINNPSLTVTVPIAVGESD-FENLNTEEFSSESELEESKEKLNATSSSEGSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPFCQVSTEEGKGKIWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGNMFEIKEVNNFSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVKLQPIYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQ-DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSKYMTLVLSRINLVFIVLFTGEFLLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPDAIHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVS----------GDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQEEVSAAIIQRNYRCY 1865 HSP 2 Score: 423.32 bits (1087), Expect = 1.359e-120 Identity = 220/464 (47.41%), Postives = 300/464 (64.66%), Query Frame = 0
Query: 10 APPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVM-IQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTT---NGDL--------------NWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAI 455
P +FR FTRE L IE R + +++ DI++E +P++ LE G +LP YGD P E+ + P+ D+DPYY K+TF+V++KG AI+RFSA +AL+ L+P +P+R+IA+ +L H LFSM I+ TIL NC M + ++T + E FT IYT+ES IK+ ARG + FT+LRD WNWLDF VI M+YVT +DLG+ SALRTFRV RALK+++VIPGLKTIV A++ SVK L DV++LT+F L+VFAL+GLQ++MG L C + + F+ TT NG + NW ++ ++S++YV +LCGN S AG CP+G+ C+K G NPNYGYTSFD F ++L FRLMTQDYWENLYQ+TLR AG +IFF+ IFLGSFYL+NLILA+VAM+Y+E + EEA ++ E + +
Sbjct: 10 GPESFRLFTRESLAAIEKRAA-----------------------EEKAKKPKKEQDIDDENKP--KPNSDLEAGKNLPFIYGDIPPEMVSEPLEDLDPYYVSKKTFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCSQWPPSDSAFETNTTSYFNGTMDSNGTFVNVTMSTFNWKDYIADDSHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFQQM 448 HSP 3 Score: 156.762 bits (395), Expect = 7.164e-37 Identity = 161/690 (23.33%), Postives = 308/690 (44.64%), Query Frame = 0
Query: 142 IRRIALLVLTHPLFSMFIIFTILLNCYVMI-------QKDTEYT--ASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILI------DLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYG--YTSFDNFGSSYLCAFRLMTQDYWENLY-------QITLRTAGPWNI---IFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFE--TDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVEL-LAENISG-------LSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVP--------------------------YFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+R+ ++ H F FI+F ILL+ + Q+ T T + VFT I+ E +K A G TY +AW WLDFL++ +S V+++ +LG+ +LRT R R L++++ G++ +V+A++ ++ ++ +V+++ + +F+++G+ ++ G CV TT G++ + VNN S+ C G + +FDN G+ YL ++ T W ++ + L+ N+ ++F+ I GSF+ +NL + ++ ++++ +++ ++ MTE + A+ L K K + FQ V + + VFD + I++ I +N+ M +E D S + T +L+ N F +F E KL ++ Y+FT GWNIFDFV+V+LS V + LAE I ++R R+ R+ +L K K + +L + ++ AL N+ +L +++FI+A+ GM F +YV+K + +NF F +S + +F++ + WD + + P +F++ ++I+ LV++N+++A++L +F+ AE +D ++ +E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYH-CVN-----------TTTGNMFEIKEVNNFSD---------------------------CQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVKLQPIYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFG---------------GQDIFMTEEQKKYYNAMKKLG-------SKKPQKPIPRPANKFQGMVFDFVTRQVFD----ISIMILICLNMVTMM-----VETDDQ---SKYMTLVLSRINLVFIVLFTGEFLLKLISLR-YYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNF--AYVKKEAG-----IDDMFNFETFGNSMICLFQITTS----AGWDGLLAPILNSAPPDCDPDAIHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYE 1746 HSP 4 Score: 70.8626 bits (172), Expect = 8.944e-11 Identity = 74/327 (22.63%), Postives = 138/327 (42.20%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGF----IKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYY-KC---------IDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNVATWKGWIDVM--NDAIDS---------VERGQQP-YRET----------------------NIYM----------YIYFVLFIVLGSFFTLNLLVGVIIDKFNEQ 1162
R I +++ + F +++ IL + MTL + P D ++ TG++ E+ IK+ + GF + + W WLDF ++ ++ + + GN+ +RT R LR L+ ++ + G+K +V ALI ++ + +V+++ + +FA+IG+ MG KC ++NT ++ + N T + W + + G D + + D+ V+ G+ P Y T N+Y I+FVL I LGSF+ +NL++ V+ + EQ
Sbjct: 118 RKIAIKILVHSLFSMLIMCTILTNCVFMTLSN-----PP---DWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYV---TEFVDLGNV---SALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCSQWPPSDSAFETNTTSYFNGTMDSNGTFVNVTMSTFNWKDYIADDSHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQ 430 HSP 5 Score: 67.0106 bits (162), Expect = 1.239e-9 Identity = 41/160 (25.62%), Postives = 82/160 (51.25%), Query Frame = 0
Query: 142 IRRIALLVLTHPLFSMFIIFTILLNC-------YVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTI-LIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIY 293
++ + L++ P + I I+LN Y M Q+ + +VFT I+T E +K+ A D + Y ++ WN D +++++S + + L ++ S LR+FR+ R K P L ++ I SV L ++ ++ ++ +FA++G+Q++
Sbjct: 700 VKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTQQFSSVLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF 855 HSP 6 Score: 62.3882 bits (150), Expect = 3.335e-8 Identity = 47/164 (28.66%), Postives = 79/164 (48.17%), Query Frame = 0
Query: 506 LAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLF 665
+ I+V F+ + I+ I N FMTL + P +T N Y FT I+ ES K+ A + F D WN DF ++V+++V + + +S LR+FR+LR K L I+ + ++ LS++ + + +FA++G+QLF
Sbjct: 122 IKILVHSLFS-MLIMCTILTNCVFMTLSN-----------PPDWTK---NVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD-LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLF 269
BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Match: gi|81886863|sp|O88420.1|SCN8A_RAT (RecName: Full=Sodium channel protein type 8 subunit alpha; AltName: Full=Peripheral nerve protein type 4; Short=PN4; AltName: Full=Sodium channel 6; Short=NaCh6; AltName: Full=Sodium channel protein type VIII subunit alpha; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.6) HSP 1 Score: 939.102 bits (2426), Expect = 0.000e+0 Identity = 532/1201 (44.30%), Postives = 736/1201 (61.28%), Query Frame = 0
Query: 493 FETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAG-ITCVPYFLATVLIANLVILNLFLALLLSSFT-DMGGNKAEDHEKDKIQIAFERI----GW------CFRGGPFSKRNQEE--------KRKREALANSDDLD---------------------------DSESM------------PNKDGYSDNYSKQDSIIGNGIDLGFSKGGLSDVYEEMGGSYD--------KTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREI--GAPAE--WVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNE-DNCDAPDSELGS--PGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
+E + ++ E++ +IV DPF +L I +CI +N FM ++H+ M+P F +L GN FT IF E F KL AM P Y+F +GWNIFD IV LS +EL ++ GLS+LRSFRLLRVFKLAKSW +LN ++ I+GN++GAL NLT VL II+FIFAV+GMQLFG+SY E VC +C LPRW+ DF HSF+IVFRVLCGEWIE+MWDCM VAG C+ F+ ++I NLV+LNLFLALLLSSF+ D +D E + +QI+ RI W F F +R +E ++K +AN +D D + M P G SD + + + D SK L D G + D + Y D E C F CQ N EE + W R ++E+ +FE+ ++ +IL+SS + EDI+ E + + L Y D++ T +F +E +K + GF+K+F NAWCWLDF+IVAVSL++ A+ LG + K++RTLRALRPLRA+++ EGM+VVVNAL+GA+PSI NVL+VCLIFWLIF+I+GVN G+Y+ C + + R+ +++ N T C ++ G E W N ++ FDNV AT+KGW+D+M A+DS + +QP E NIYMYIYFV+FI+ GSFFTLNL +GVIID FN+QK K G D FMTE+Q+KY AMKK +KKP K +PRP K Q I+F +T + FD+++M I LNM+TMM + QS +L +NL F++ FT E +LKMFALRH+YF+ WN+FD VVV+LS+ G+FL+DIIEKYFVSPTL RV+R+A+IGR+LRLIKGA+GIRTLLF+L+M+ PAL NI LLLFLVMFIFS+FGMS F VK G DD+ NF+TF + LFQI TSAGW L I N +C GS G+CG+ + F + Y++++FLI++NMYIA+ILEN+S A+E+ + ++++D+E FYE+W +FDP+ TQ++ Y +L +F D LE PL++ KPN ++I MD+P+V D + C DIL T+ G +E V + + YE +++++ +++E A ++QR+++ H
Sbjct: 731 WECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHH--------PMTPQFEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINQECKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTKVKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTGVDIHRNGDFQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRF-----KCCQVNIEEGLGKSWWILRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIDIVNNKTDCEKLMEGNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPDYEGNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQ-DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVS----------GDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGH 1907 HSP 2 Score: 439.499 bits (1129), Expect = 6.300e-126 Identity = 228/450 (50.67%), Postives = 306/450 (68.00%), Query Frame = 0
Query: 10 APPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMI-QKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVK---DFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAI 455
P +F+PFT E L IE RI + K K + DG+ H E+D D + + P++ LE G LP YGD P L VP+ D DPYY ++TF+V+++G ++RFSA AL+ LSPF+ IRRIA+ +L H +FSM I+ TIL NC M E++ + E FT IYT+ES +K+ ARG D FT+LRD WNWLDF VI M+YVT +DLG+ SALRTFRV RALK+++VIPGLKTIV A++ SVK L DV++LT+F L+VFAL+GLQ++MG L CV +F+++ L +N T D W+ ++NN++N+Y+ P + +LCGNSS AG CP+GF C+K G NPNYGYTSFD F ++L FRLMTQDYWENLYQ+TLR AG +IFF+ IF+GSFYL+NLILA+VAM+Y+E + EEA ++ E +A+
Sbjct: 10 GPDSFKPFTPESLANIERRIAESKLKKPPK-----------ADGS----HREDDEDSKPK------PNSDLEAGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYL-ENGTRGFD--WEEYINNKTNFYMVPGMLEPLLCGNSSDAGQCPEGFQCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAM 435 HSP 3 Score: 145.206 bits (365), Expect = 2.180e-33 Identity = 149/692 (21.53%), Postives = 303/692 (43.79%), Query Frame = 0
Query: 142 IRRIALLVLTHPLFSMFIIFTILLNCYVMI-------QKDTEYT--ASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILI------DLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESN---WYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGP----------WNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTE----LFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVP-------------------------YFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+R+ L++ H F FIIF ILL+ + Q+ T T + VFT I+ E +K A G V + +AW WLDFL++A+S V+++ +LG+ +LRT R R L++++ G++ +V+A++ ++ ++ +V+++ + +F+++G+ ++ G C + + + F+ N + ++ + S W IN FDN G+ YL ++ T W ++ + + P + I+F+ I GSF+ +NL + ++ ++++ +++ ++ MTE + A+ LG K + ++++ IVFD T+ + I++ I +N+ M + + S ++L N F F E K+ A+ Y+FT GWNIFDFV+V+LS V + +I + ++R R+ R+ +L K K + +L + ++ AL N+ +L +++FIF++ GM F +YV+ + +NF F +S + +F++ + WD + + + P +F++ ++I+ L+++N+++A++L +F+ A+ +D + +E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY-HYCFNETSE-IRFEIDIVNNKTDCEKLMEGNSTEIRWKNVKIN----------------------------------FDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPDYEGNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFG---------------GQDIFMTEEQKKYYNAMKK--------LGSKKPQ----KPIPRPLNKIQG-IVFDFVTQQAFDIVIMMLICLNMVTMMV--------ETDTQSKQMENILYWINLVFVIFFTCECVLKMFALR-HYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF--AYVKHEAG-----IDDMFNFETFGNSMICLFQITTS----AGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYE 1788 HSP 4 Score: 70.8626 bits (172), Expect = 9.430e-11 Identity = 71/292 (24.32%), Postives = 125/292 (42.81%), Query Frame = 0
Query: 781 KRNQEEKRKREALANSDDLDDSESMPNKDGYSDNYSKQDSIIGNGIDLGFSKG----GLSDVYEEMGGSYDKTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGF----IKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYY-KCI 1063
+R E K K+ A+ +D E D+ K +S + G L F G GL V E Y T +T V + L +Y + PF + R I +++ + F I++ IL + MT F P + Y TG++ E+ +K+ + GF + + W WLDF ++ ++ + + GN+ +RT R LR L+ ++ + G+K +V ALI ++ + +V+++ + +FA+IG+ MG KC+
Sbjct: 27 RRIAESKLKKPPKADGSHREDDE---------DSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPF-------------NLIRRIAIKILIHSVFSMIIMCTILTNCVFMT-----FSNPPEWSKNVEY---TFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYV---TEFVDLGNV---SALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCV 282 HSP 5 Score: 68.5514 bits (166), Expect = 4.874e-10 Identity = 46/166 (27.71%), Postives = 82/166 (49.40%), Query Frame = 0
Query: 140 HP----IRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTE-------VVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTI-LIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIY 293
HP ++ I L++ P + I I+LN M + T E +VFT I+T E +KL A D + Y ++ WN D ++++S + + L D+ S LR+FR+ R K P L ++ I SV L ++ ++ ++ +FA++G+Q++
Sbjct: 734 HPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEHVLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF 895 HSP 6 Score: 65.0846 bits (157), Expect = 4.982e-9 Identity = 65/310 (20.97%), Postives = 130/310 (41.94%), Query Frame = 0
Query: 519 IILC-IAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQL---------------FGQSYVEK------------------------------------VCNPKWKCVL----PRWNFTD---FMHSFMIVFRVLCGEWIESMWD-CMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQ 764
II+C I N FMT + P ++ N Y FT I+ ES K+ A + F D WN DF ++++++V + + +S LR+FR+LR K L I+ + ++ LS++ + + +FA++G+QL F +SY+E C ++C+ P + +T F +F+ +FR++ ++ E+++ + AG T + +F+ + + + ++NL LA++ ++ + E+ E+ + +
Sbjct: 137 IIMCTILTNCVFMTFSN-----------PPEWSK---NVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD-LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTRGFDWEEYINNKTNFYMVPGMLEPLLCGNSSDAGQCPEGFQCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAE 431
BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Match: gi|34098761|sp|Q9WTU3.1|SCN8A_MOUSE (RecName: Full=Sodium channel protein type 8 subunit alpha; AltName: Full=Sodium channel protein type VIII subunit alpha; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.6) HSP 1 Score: 936.791 bits (2420), Expect = 0.000e+0 Identity = 530/1201 (44.13%), Postives = 733/1201 (61.03%), Query Frame = 0
Query: 493 FETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAG-ITCVPYFLATVLIANLVILNLFLALLLSSFT-DMGGNKAEDHEKDKIQIAFERI----GWC------FRGGPFSKRNQEE--------KRKREALANSDDLD---------------------------DSESM------------PNKDGYSDNYSKQDSIIGNGIDLGFSKGGLSDVYEEMGGSYD--------KTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREI----GAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNE-DNCDAPDSELGS--PGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
+E + ++ E++ +IV DPF +L I +CI +N FM ++H+ M+P F +L GN FT IF E F KL AM P Y+F +GWNIFD IV LS +EL ++ GLS+LRSFRLLRVFKLAKSW +LN ++ I+GN++GAL NLT VL II+FIFAV+GMQLFG+SY E VC +C LPRW+ DF HSF+IVFRVLCGEWIE+MWDCM VAG C+ F+ ++I NLV+LNLFLALLLSSF+ D +D E + +QI+ RI W F F +R +E ++K +AN +D D + M P G SD + + + D SK L D G + D + Y D E C F CQ N EE + W R ++E+ +FE+ ++ +IL+SS + EDI+ E + + L Y D++ T +F +E +K + GF+K+F NAWCWLDF+IVAVSL++ A+ LG + K++RTLRALRPLRA+++ EGM+VVVNAL+GA+PSI NVL+VCLIFWLIF+I+GVN G+Y+ C + + R+ + + N T C ++ W N ++ FDNV AT+KGW+D+M A+DS + +QP E NIYMYIYFV+FI+ GSFFTLNL +GVIID FN+QK K G D FMTE+Q+KY AMKK +KKP K +PRP K Q I+F +T + FD+++M I LNM+TMM + QS +L +NL F++ FT E +LKMFALRH+YF+ WN+FD VVV+LS+ G+FL+DIIEKYFVSPTL RV+R+A+IGR+LRLIKGA+GIRTLLF+L+M+ PAL NI LLLFLVMFIFS+FGMS F VK G DD+ NF+TF + LFQI TSAGW L I N +C GS G+CG+ + F + Y++++FLI++NMYIA+ILEN+S A+E+ + ++++D+E FYE+W +FDP+ TQ++ Y +L +F D LE PL++ KPN ++I MD+P+V D + C DIL T+ G +E V + + YE +++++ +++E A ++QR+++ H
Sbjct: 731 WECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHH--------PMTPQFEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISQECKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWAKVKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTGVDIHRNGDFQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRF-----KCCQVNIEEGLGKSWWILRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIDEVNNKTDCEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPDYEGNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQ-DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVS----------GDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGH 1907 HSP 2 Score: 439.884 bits (1130), Expect = 5.428e-126 Identity = 228/450 (50.67%), Postives = 306/450 (68.00%), Query Frame = 0
Query: 10 APPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMI-QKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVK---DFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAI 455
P +F+PFT E L IE RI + K K + DG+ H E+D D + + P++ LE G LP YGD P L VP+ D DPYY ++TF+V+++G ++RFSA AL+ LSPF+ IRRIA+ +L H +FSM I+ TIL NC M E++ + E FT IYT+ES +K+ ARG D FT+LRD WNWLDF VI M+YVT +DLG+ SALRTFRV RALK+++VIPGLKTIV A++ SVK L DV++LT+F L+VFAL+GLQ++MG L CV +F+++ L +N T D W+ ++NN++N+Y+ P + +LCGNSS AG CP+GF C+K G NPNYGYTSFD F ++L FRLMTQDYWENLYQ+TLR AG +IFF+ IF+GSFYL+NLILA+VAM+Y+E + EEA ++ E +A+
Sbjct: 10 GPDSFKPFTPESLANIERRIAESKLKKPPK-----------ADGS----HREDDEDSKPK------PNSDLEAGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYL-ENGTRGFD--WEEYINNKTNFYMVPGMLEPLLCGNSSDAGQCPEGFQCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAM 435 HSP 3 Score: 147.517 bits (371), Expect = 4.489e-34 Identity = 150/692 (21.68%), Postives = 304/692 (43.93%), Query Frame = 0
Query: 142 IRRIALLVLTHPLFSMFIIFTILLNCYVMI-------QKDTEYT--ASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILI------DLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWV---NNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGP----------WNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTE----LFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVP-------------------------YFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+R+ L++ H F FIIF ILL+ + Q+ T T + VFT I+ E +K A G V + +AW WLDFL++A+S V+++ +LG+ +LRT R R L++++ G++ +V+A++ ++ ++ +V+++ + +F+++G+ ++ G C + + + F+ N + ++ + N E W IN FDN G+ YL ++ T W ++ + + P + I+F+ I GSF+ +NL + ++ ++++ +++ ++ MTE + A+ LG K + ++++ IVFD T+ + I++ I +N+ M + + S ++L N F F E K+ A+ Y+FT GWNIFDFV+V+LS V + +I + ++R R+ R+ +L K K + +L + ++ AL N+ +L +++FIF++ GM F +YV+ + +NF F +S + +F++ + WD + + + P +F++ ++I+ L+++N+++A++L +F+ A+ +D + +E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY-HYCFNETSE-IRFEIDEVNNKTDCEKLMEGNNTEIRWKNVKIN----------------------------------FDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPDYEGNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF---------------GGQDIFMTEEQKKYYNAMKK--------LGSKKPQ----KPIPRPLNKIQG-IVFDFVTQQAFDIVIMMLICLNMVTMMV--------ETDTQSKQMENILYWINLVFVIFFTCECVLKMFALR-HYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF--AYVKHEAG-----IDDMFNFETFGNSMICLFQITTS----AGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYE 1788 HSP 4 Score: 70.8626 bits (172), Expect = 9.351e-11 Identity = 71/292 (24.32%), Postives = 125/292 (42.81%), Query Frame = 0
Query: 781 KRNQEEKRKREALANSDDLDDSESMPNKDGYSDNYSKQDSIIGNGIDLGFSKG----GLSDVYEEMGGSYDKTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGF----IKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYY-KCI 1063
+R E K K+ A+ +D E D+ K +S + G L F G GL V E Y T +T V + L +Y + PF + R I +++ + F I++ IL + MT F P + Y TG++ E+ +K+ + GF + + W WLDF ++ ++ + + GN+ +RT R LR L+ ++ + G+K +V ALI ++ + +V+++ + +FA+IG+ MG KC+
Sbjct: 27 RRIAESKLKKPPKADGSHREDDE---------DSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPF-------------NLIRRIAIKILIHSVFSMIIMCTILTNCVFMT-----FSNPPEWSKNVEY---TFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYV---TEFVDLGNV---SALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCV 282 HSP 5 Score: 68.5514 bits (166), Expect = 4.332e-10 Identity = 46/166 (27.71%), Postives = 82/166 (49.40%), Query Frame = 0
Query: 140 HP----IRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTE-------VVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTI-LIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIY 293
HP ++ I L++ P + I I+LN M + T E +VFT I+T E +KL A D + Y ++ WN D ++++S + + L D+ S LR+FR+ R K P L ++ I SV L ++ ++ ++ +FA++G+Q++
Sbjct: 734 HPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEHVLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF 895 HSP 6 Score: 65.4698 bits (158), Expect = 4.246e-9 Identity = 65/310 (20.97%), Postives = 130/310 (41.94%), Query Frame = 0
Query: 519 IILC-IAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQL---------------FGQSYVEK------------------------------------VCNPKWKCVL----PRWNFTD---FMHSFMIVFRVLCGEWIESMWD-CMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQ 764
II+C I N FMT + P ++ N Y FT I+ ES K+ A + F D WN DF ++++++V + + +S LR+FR+LR K L I+ + ++ LS++ + + +FA++G+QL F +SY+E C ++C+ P + +T F +F+ +FR++ ++ E+++ + AG T + +F+ + + + ++NL LA++ ++ + E+ E+ + +
Sbjct: 137 IIMCTILTNCVFMTFSN-----------PPEWSK---NVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD-LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTRGFDWEEYINNKTNFYMVPGMLEPLLCGNSSDAGQCPEGFQCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAE 431
BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Match: gi|34098756|sp|Q9UQD0.1|SCN8A_HUMAN (RecName: Full=Sodium channel protein type 8 subunit alpha; AltName: Full=Sodium channel protein type VIII subunit alpha; AltName: Full=Voltage-gated sodium channel subunit alpha Nav1.6) HSP 1 Score: 936.406 bits (2419), Expect = 0.000e+0 Identity = 531/1201 (44.21%), Postives = 731/1201 (60.87%), Query Frame = 0
Query: 493 FETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAG-ITCVPYFLATVLIANLVILNLFLALLLSSFT-DMGGNKAEDHEKDKIQIAFERI----GW------CFRGGPFSKRNQEE--------KRKREALANSDDLD---------------------------DSESM------------PNKDGYSDNYSKQDSIIGNGIDLGFSKGGLSDVYEEMGGSYD--------KTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREI----GAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNE-DNCDAPDSELGS--PGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
+E + ++ E++ +IV DPF +L I +CI +N FM ++H+ M+P F +L GN FT IF E F KL AM P Y+F +GWNIFD IV LS +EL ++ GLS+LRSFRLLRVFKLAKSW +LN ++ I+GN++GAL NLT VL II+FIFAV+GMQLFG+SY E VC C LPRW+ DF HSF+IVFRVLCGEWIE+MWDCM VAG C+ F+ ++I NLV+LNLFLALLLSSF+ D +D E + +QI+ RI W F F +R +E ++K +AN D D + M P G SD + + + D SK L D G + D + Y D E C F CQ N EE + W R ++E+ +FE+ ++ +IL+SS + EDI+ E + + L Y D++ T +F +E +K + GF+K+F NAWCWLDF+IVAVSL++ A+ LG + K++RTLRALRPLRA+++ EGM+VVVNAL+GA+PSI NVL+VCLIFWLIF+I+GVN G+Y+ C + + R+ E + N T C ++ W N ++ FDNV AT+KGW+D+M A+DS + +QP E NIYMYIYFV+FI+ GSFFTLNL +GVIID FN+QK K G D FMTE+Q+KY AMKK +KKP K +PRP K Q I+F +T + FD+++M I LNM+TMM + QS +L +NL F++ FT E +LKMFALRH+YF+ WN+FD VVV+LS+ G+FL+DIIEKYFVSPTL RV+R+A+IGR+LRLIKGA+GIRTLLF+L+M+ PAL NI LLLFLVMFIFS+FGMS F VK G DD+ NF+TF + LFQI TSAGW L I N +C GS G+CG+ + F + Y++++FLI++NMYIA+ILEN+S A+E+ + ++++D+E FYE+W +FDP+ TQ++ Y +L +F D LE PL++ KPN ++I MD+P+V D + C DIL T+ G +E V + + YE +++++ +++E A ++QR+++ H
Sbjct: 733 WECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHH--------PMTPQFEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTKLKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRF-----KCCQVNIEEGLGKSWWILRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIEDVNNKTECEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQ-DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVS----------GDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGH 1909 HSP 2 Score: 434.876 bits (1117), Expect = 2.704e-124 Identity = 224/450 (49.78%), Postives = 305/450 (67.78%), Query Frame = 0
Query: 10 APPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMI-QKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVK---DFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAI 455
P +F+PFT E L IE RI + K K + DG+ H E+D D + + P++ LE G LP YGD P L VP+ D DPYY ++TF+V+++G ++RFSA AL+ LSPF+ IRRIA+ +L H +FSM I+ TIL NC M +++ + E FT IYT+ES +K+ ARG D FT+LRD WNWLDF VI M+Y+T ++LG+ SALRTFRV RALK+++VIPGLKTIV A++ SVK L DV++LT+F L+VFAL+GLQ++MG L CV +F+++ L +N T D W+ ++NN++N+Y P + +LCGNSS AG CP+G+ C+K G NPNYGYTSFD F ++L FRLMTQDYWENLYQ+TLR AG +IFF+ IF+GSFYL+NLILA+VAM+Y+E + EEA ++ E +A+
Sbjct: 10 GPDSFKPFTPESLANIERRIAESKLKKPPK-----------ADGS----HREDDEDSKPK------PNSDLEAGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYL-ENGTKGFD--WEEYINNKTNFYTVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAM 435 HSP 3 Score: 146.747 bits (369), Expect = 7.648e-34 Identity = 150/692 (21.68%), Postives = 303/692 (43.79%), Query Frame = 0
Query: 142 IRRIALLVLTHPLFSMFIIFTILLNCYVMI-------QKDTEYT--ASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILI------DLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWV---NNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGP----------WNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTE----LFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVP-------------------------YFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+R+ L++ H F FIIF ILL+ + Q+ T T + VFT I+ E +K A G V + +AW WLDFL++A+S V+++ +LG+ +LRT R R L++++ G++ +V+A++ ++ ++ +V+++ + +F+++G+ ++ G C + + + F+ N ++ + N E W IN FDN G+ YL ++ T W ++ + + P + I+F+ I GSF+ +NL + ++ ++++ +++ ++ MTE + A+ LG K + ++++ IVFD T+ + I++ I +N+ M + + S ++L N F F E K+ A+ Y+FT GWNIFDFV+V+LS V + +I + ++R R+ R+ +L K K + +L + ++ AL N+ +L +++FIF++ GM F +YV+ + +NF F +S + +F++ + WD + + + P +F++ ++I+ L+++N+++A++L +F+ A+ +D + +E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY-HYCFNETSE-IRFEIEDVNNKTECEKLMEGNNTEIRWKNVKIN----------------------------------FDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF---------------GGQDIFMTEEQKKYYNAMKK--------LGSKKPQ----KPIPRPLNKIQG-IVFDFVTQQAFDIVIMMLICLNMVTMMV--------ETDTQSKQMENILYWINLVFVIFFTCECVLKMFALR-HYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF--AYVKHEAG-----IDDMFNFETFGNSMICLFQITTS----AGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYE 1790 HSP 4 Score: 72.4034 bits (176), Expect = 2.925e-11 Identity = 72/292 (24.66%), Postives = 126/292 (43.15%), Query Frame = 0
Query: 781 KRNQEEKRKREALANSDDLDDSESMPNKDGYSDNYSKQDSIIGNGIDLGFSKG----GLSDVYEEMGGSYDKTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGF----IKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYY-KCI 1063
+R E K K+ A+ +D E D+ K +S + G L F G GL V E Y T +T V + L +Y + PF + R I +++ + F I++ IL + MT F P D ++ TG++ E+ +K+ + GF + + W WLDF ++ ++ I + GN+ +RT R LR L+ ++ + G+K +V ALI ++ + +V+++ + +FA+IG+ MG KC+
Sbjct: 27 RRIAESKLKKPPKADGSHREDDE---------DSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPF-------------NLIRRIAIKILIHSVFSMIIMCTILTNCVFMT-----FSNPP---DWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYI---TEFVNLGNV---SALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCV 282 HSP 5 Score: 68.5514 bits (166), Expect = 4.875e-10 Identity = 46/166 (27.71%), Postives = 82/166 (49.40%), Query Frame = 0
Query: 140 HP----IRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTE-------VVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTI-LIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIY 293
HP ++ I L++ P + I I+LN M + T E +VFT I+T E +KL A D + Y ++ WN D ++++S + + L D+ S LR+FR+ R K P L ++ I SV L ++ ++ ++ +FA++G+Q++
Sbjct: 736 HPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEHVLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF 897 HSP 6 Score: 67.0106 bits (162), Expect = 1.482e-9 Identity = 65/310 (20.97%), Postives = 130/310 (41.94%), Query Frame = 0
Query: 519 IILC-IAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQL---------------FGQSYVEK------------------------------------VCNPKWKCVL----PRWNFTD---FMHSFMIVFRVLCGEWIESMWD-CMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQ 764
II+C I N FMT + P ++ N Y FT I+ ES K+ A + F D WN DF +++++++ N+ +S LR+FR+LR K L I+ + ++ LS++ + + +FA++G+QL F +SY+E C ++C+ P + +T F +F+ +FR++ ++ E+++ + AG T + +F+ + + + ++NL LA++ ++ + E+ E+ + +
Sbjct: 137 IIMCTILTNCVFMTFSN-----------PPDWSK---NVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFV-NLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTKGFDWEEYINNKTNFYTVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAE 431
BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Match: gi|1158626117|gb|AQY19123.1| (voltage-gated sodium channel Nav1.2 [Lepeophtheirus salmonis]) HSP 1 Score: 1496.87 bits (3874), Expect = 0.000e+0 Identity = 797/1125 (70.84%), Postives = 917/1125 (81.51%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGN-KAEDHEKDKIQIAFERIGWCFRGGPFSKRNQEEK---RKREALANSDDLDDSESMPNKDGYSDNYSKQDSIIGNGIDLGFSKGGLS-DVYEEMGGSYDKTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNE-DNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
+ SEVLA+IVFDPF +L I LCI VNV FM DHYNIEY NGGMS +LL NGNYFFT IFA ESF KL AMSPRYFF DGWN FDF+IV+LS VELLAE ++GLSMLRSFRLLRVFKLAKSWKSLNDI+TIM NT+GALSNLT VLCIIIFIFAVMGMQLFG Y+EK C KWKC LPRWNFTDF+HSFMIVFRVLCGEWIESMW CM+VAG TCVPYFLATVL+ANLVILNLFLALLLSSF+DMGG+ + ED + DK+ IA R F F+KR +E+ R R +A+S +P +G ++ I G+ ++ + D + K E I Y+P + + VEDCCP FVYR++P G+ PFW+ W++ RL+ +LIEN+YFE +VL LIL+SSFVMTLEDIWFET+P LID LYYLDRILT VFF+ET++KLF+MG + YF NAWCWLDFVIVAVSLINF ASL+GA NIPIFKTMRTLRALRPLRAM+K+EGMKVVVNALIGALPSIFNVL+VC++FWLIFAIIGVN MG ++KCIDS TG ++SHE+IPN T+C A+W+NS+VTFDNV ATWKGWI +M+DAIDSV +QPYRE +I MY YFV FI+LGSFFTLNLLVGVIIDKFNEQKNKGGS+LD+FMTEDQ+KYIAAMKKAS KKPLKALPRP+WKPQAI+FG++TNKKFDMI+MGFIGLNMLTMM DHY Q+ WTFVLDNLN+FFI++FT EMLLK+FALR +YFSEPWNLFD +VLLSL GLFLSDIIE YFVSPTLLRVVRV K+GRVLRLIKGA+GIRTLLFSLVMA PAL NI LLLFLVMFIF+VFGMSLFKNVKI GFDDVHNFQTF KT TLLFQICTSAGWAE + AISN ++C P+ G+PG+CGS +A VIF+I YLVL+FLII+NMYIAVILENY+QA EDV EGIT+EDY+LFYE+W+EFDP G+QY+ ++ L EFLDVLEPPLQI PNKFKII MDIPIVRF PD G+ ED VFC+DILD +TQDFFARKG+ DDSPH+E VKVT+F DRPGYER SSS KQRE+YC SLI++S+K H
Sbjct: 605 RFSEVLAVIVFDPFVDLSITLCIVVNVLFMMFDHYNIEYDANGGMSMEMNNLLKNGNYFFTTIFAFESFMKLMAMSPRYFFADGWNCFDFLIVILSLVELLAEGVNGLSMLRSFRLLRVFKLAKSWKSLNDIMTIMANTLGALSNLTVVLCIIIFIFAVMGMQLFGSFYIEKACE-KWKCELPRWNFTDFLHSFMIVFRVLCGEWIESMWACMYVAGPTCVPYFLATVLVANLVILNLFLALLLSSFSDMGGSGEEEDGKPDKMSIAVNRFKRLFS---FTKRKIKEELFDRIRRKIAHSKS---KPLIPEANGNGFSHKTNGYIGGHNNVPSETQTYIPIDQQSDKFAPQTKDHEEIYYDPLETLEVEDCCPPFVYRIIPL--GDQHSPFWEAWTQQRLMAMRLIENEYFEGVVLGLILLSSFVMTLEDIWFETRPVLIDCLYYLDRILTVVFFLETTLKLFAMGPVMYFTNAWCWLDFVIVAVSLINFIASLVGAVNIPIFKTMRTLRALRPLRAMSKMEGMKVVVNALIGALPSIFNVLLVCIVFWLIFAIIGVNLFMGTFHKCIDSITGHKFSHEIIPNKTVCLN-QTNAQWINSKVTFDNVIMAYLALLQVATWKGWITIMDDAIDSVAINKQPYREASIGMYFYFVAFIILGSFFTLNLLVGVIIDKFNEQKNKGGSSLDAFMTEDQKKYIAAMKKASKKKPLKALPRPYWKPQAIVFGIVTNKKFDMIIMGFIGLNMLTMMMDHYQQTEGWTFVLDNLNVFFIMIFTLEMLLKIFALRQYYFSEPWNLFDFFIVLLSLGGLFLSDIIETYFVSPTLLRVVRVVKVGRVLRLIKGAKGIRTLLFSLVMALPALGNICLLLFLVMFIFAVFGMSLFKNVKIIPGFDDVHNFQTFGKTITLLFQICTSAGWAETFEAISNNGEDCTPPNYLTGNPGDCGSYVAGVIFIIFYLVLSFLIIVNMYIAVILENYTQAQEDVHEGITEEDYDLFYEIWQEFDPSGSQYISFRHLSEFLDVLEPPLQIPMPNKFKIINMDIPIVRFNPPDGGEVREDSVFCSDILDAVTQDFFARKGSGRDDSPHVEDVKVTSFGDRPGYERTSSSWTKQRENYCGSLIKKSWKMH 1719 HSP 2 Score: 594.349 bits (1531), Expect = 1.905e-179 Identity = 322/497 (64.79%), Postives = 396/497 (79.68%), Query Frame = 0
Query: 4 WEFEAEAPPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIE-PSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLN--WDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETD 496
+E E + PTFRPFTRE+ + IE+RI +KK +KKR+ KR++NIK FGDGARAR+ Y +DSD +++ + P+ ++EQG+DLPRRYG+FPLEL+N PICDIDP+Y D+RTFMV++K G+I RFSA ALFFL+PFHPIRRIA+ VLTHPLF+ II TIL+NC VM+ DTEY +++E++FT+IYTYESA+KL ARG + FTYLRD WNWLDF VI MSY+TI IDLGSFS+LRTFRVFRALKSVAV+PGLKTIV AI+YSVKNL DV +LT+F LA+FALLGLQ+YMGVL+Q C+ + D +L N NG ++ + W N SN YVS + + ++CGNSSGAG CP+G CL G NPN+GYT+FDNFG +YLCAFRLMTQDYWENLYQITLRTAGPWNI+FFI NIF+GSFYLINLILAIVAMSYDELQR AEEEA +E+EELEA++ AE A EAE EA+ +S ++FS G DN F+ D
Sbjct: 2 YEIETGSIPTFRPFTREDYEKIENRIFEKKLIQKKRDEKRRKNIKEFGDGARARKQYNQDSDEDDDPESVPPIPNKRIEQGNDLPRRYGEFPLELSNTPICDIDPFYADQRTFMVIAKNGSITRFSAEPALFFLTPFHPIRRIAIRVLTHPLFNFIIICTILVNCIVMMLPDTEYXSASEIIFTSIYTYESAVKLLARGFILHNFTYLRDPWNWLDFAVIGMSYITIAIDLGSFSSLRTFRVFRALKSVAVVPGLKTIVGAIIYSVKNLFDVTILTLFGLALFALLGLQLYMGVLTQRCIYEIPDELLEMN---NGSVHSVYKSWYINSSNLYVSEVTNDYIMCGNSSGAGKCPEGTVCLAGFAQNPNHGYTTFDNFGYAYLCAFRLMTQDYWENLYQITLRTAGPWNILFFILNIFMGSFYLINLILAIVAMSYDELQRLAEEEAERELEELEALKAAEIAVFKEAE----EALGDVSKVNFSSSSGVDNPSFKFD 491 HSP 3 Score: 128.257 bits (321), Expect = 8.165e-26 Identity = 151/681 (22.17%), Postives = 301/681 (44.20%), Query Frame = 0
Query: 143 RRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTAST---------EVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTIL------IDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITL----------RTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESM-------WDCM--------------FVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
R +A+ ++ + F ++ ILL+ +VM +D + + + T ++ E+ +KLFA G V Y +AW WLDF+++A+S + + +++ F +RT R R L++++ + G+K +V+A++ ++ ++ +V+++ I +FA++G+ ++MG + C+ + + N + ++ + W IN K+ +FDN +YL ++ T W + + R A +F+ I LGSF+ +NL++ ++ ++ E+ K L+A ++ A A++ +L + + V I+ F ++ I+ I +N+ M +DHY + +T +L N N FF IF LE K+ A+ +Y+F++ WN+FDF IV+LS L +I + L ++R ++ RV +L K K + +L + + AL N+ +L +++FIFAV GM LF + P + V NF F + ++F++ W E+ DC +VAG+ + ++L +++ L+I+N+++A++L ++T + E ++ + +E
Sbjct: 994 RLMAMRLIENEYFEGVVLGLILLSSFVMTLEDIWFETRPVLIDCLYYLDRILTVVFFLETTLKLFAMGPV----MYFTNAWCWLDFVIVAVSLINFIASLVGAVNIPIFKTMRTLRALRPLRAMSKMEGMKVVVNALIGALPSIFNVLLVCIVFWLIFAIIGVNLFMGTFHK-CIDSITGHKFSHEIIPNKTVCLNQ---TNAQW----INSKV------------------------------TFDNVIMAYLALLQVATWKGWITIMDDAIDSVAINKQPYREASIGMYFYFVAFIILGSFFTLNLLVGVIIDKFN-------EQKNKGGSSLDAFMTEDQKKYIAAMKKASKKKPLKAL---------------PRPYWKPQAIVFGIVTNKKF-DMIIMGFIGLNMLTMMMDHYQ--------QTEGWTFVLDNLNVFFIMIFTLEMLLKIFALR-QYYFSEPWNLFDFFIVLLSLGGLFLSDIIETYFVSPTLLRVVRVVKVGRVLRLIKGAKGIRTLLFSLVMALPALGNICLLLFLVMFIFAVFGMSLFKNVKII----PGFDDV---HNFQTFGKTITLLFQICTSAGWAETFEAISNNGEDCTPPNYLTGNPGDCGSYVAGVIFIIFYL---VLSFLIIVNMYIAVILENYTQAQEDVHEGITEEDYDLFYE 1590 HSP 4 Score: 72.0182 bits (175), Expect = 1.311e-8 Identity = 74/311 (23.79%), Postives = 137/311 (44.05%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMG-----------------------RYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRV--------------TFDNV--ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNE 1161
R I +++ + F I++ ILV+ VM L D + + + I T ++ E+++KL + GFI Y + W WLDF ++ +S I L G+ F ++RT R R L+++A + G+K +V A+I ++ ++F+V ++ L +FA++G+ MG YK N+ Y EV + +C + V TFDN A + + D +++ Q R + ++F+L I +GSF+ +NL++ ++ ++E
Sbjct: 142 RRIAIRVLTHPLFNFIIICTILVNCIVMMLPDTEYXSAS---------EIIFTSIYTYESAVKLLARGFILHNFTYLRDPWNWLDFAVIGMSYITIAIDL-GS-----FSSLRTFRVFRALKSVAVVPGLKTIVGAIIYSVKNLFDVTILTLFGLALFALLGLQLYMGVLTQRCIYEIPDELLEMNNGSVHSVYKSWYINSSNLYVSEVTNDYIMCGNSSGAGKCPEGTVCLAGFAQNPNHGYTTFDNFGYAYLCAFRLMTQDYWENLY--QITLRTAGPWNILFFILNIFMGSFYLINLILAIVAMSYDE 435
BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Match: gi|1188076883|ref|XP_020785060.1| (sodium channel protein type 4 subunit alpha B-like [Boleophthalmus pectinirostris]) HSP 1 Score: 1347.8 bits (3487), Expect = 0.000e+0 Identity = 766/1712 (44.74%), Postives = 1054/1712 (61.57%), Query Frame = 0
Query: 11 PPT----FRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTE-YTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICV-------KDFHDNVLFQNMTT-NGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEE----LEAIQCAEE------AAMTEAEAAAAEA-----------VAHLSLLDFSLLGGKDNKGFETDSFQS------------------------------QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGIT-CVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFERIG-----------------WCFRGGP---FSKRNQEEKRKREA---LANSDDLDDSESMPNKDG-YSDNYSKQDSIIGNGIDLGFSKGGLSDVYEEMGGSYDKTSETIVYNPTDEVLV-------EDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREI--GAPAE--WVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISN-EDNCDAPDSELGSP--GNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
PP FRPFT + L+ +IQ+K + ++K KR+EN IE E ++ +P++ LE G LP YGD E N P+ D+DP+Y+ ++TF+++ KG IYRF+A A + LSPF+P+R +A+ +L H +FS+FI+ TIL NC M D ++ + E VFT IYT+E+ +K+ +RG FT+LRD WNWLDF+VI+M+Y+T +DLG+ SALRTFRV RALK++ VIPGLKTIV A++ SVK L DV++LT+F L+VFAL+GLQ++MG L Q CV + + L QN T GD N+ ++NN +N+Y +LCGNSS AGVCPDG+ CLK GPNPNYGYTS+D+F ++L FRLMTQD+WENL+Q+TLR AG ++FF+ IFLGSFYLINLILA+VAM+Y E + + +E R++ EE LEA++ EE A + ++ AE+ V +S++D LG K S S + VL +IV DPF +L I +CI +N FM ++HY MS F LLT GN FT IF E KL A+ P ++F GWNIFD +IV +S VEL N+ GLS+LRSFRL+RVFKLAKSW +LN ++ I+GN++GAL NLT VL II+FIFAV+GMQLFG+SY E VC C LPRW+ TDF HSF+I+FRVLCGEWIE+MWDCM V+G T C+ F+ ++I NLV+LNLFLALLLSSF+ + ED ++ +QIA RI W R P ++ NQ ++ K E +A + + +S +++ Y DN + S+ LSD ++ T+ NP EDCC YR P + +W+ R ++E+ YFE+ ++ +IL+SS + EDI+ E + + L + D++ T VF +E +K + GF YF NAWCWLDF+IV VSL++ A++LG + K++RTLRALRPLRA+++ EGM+VVVNAL+GA+PSIFNVL+VCLIFWLIF+I+GVN G++Y C + +G+R+ + N + C E+ P E W N +V +DNV AT+KGW+D+M A+DS E QP E ++YMY+YFV+FI+ GSFFTLNL +GVIID FN+QK K T D FMTE+Q+KY AMKK +KKP K +PRP Q ++F ++T + FD+I+M I LNM+TMM + +QS +L +NL FIV+FT E LK+ ALRHHYFS WN+FD VVV+LS+ GL L+DIIEKYFVSPTL RV+R+A+IGR+LRLI+GA+GIRTLLF+L+M+ PAL NI LLLFL+MFIFS+FGMS F VK DD+ NF+ F + LF I TSAGW I N +CD GS GNCGS +IF Y++++FL+++NMYIA+ILEN++ A+E+ + + +ED+++FYE W ++DP TQ++ Y +L EF DVL+ PL+I KPN ++IQMD+P+V D + C DIL LT G +E + + YE +SS++ +++E A +IQR ++ H
Sbjct: 6 PPVGAELFRPFTLQTLE----KIQEKHEEEQKLAEKRRENY------------------IELSEDDLPKPASDLEAGKPLPFIYGDPAPEFFNTPLEDLDPFYQSQKTFIILGKGNVIYRFNAEPACYLLSPFNPLRLLAIRILIHSVFSLFIMMTILTNCVFMTMSDPPPWSKTVEYVFTGIYTFEALVKVCSRGFCVGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVLAPPLNATAANSSDLLQNTTDGQGDFNYYEFINNPANYYFLEGQRDPLLCGNSSDAGVCPDGYVCLKAGPNPNYGYTSYDSFAWAFLALFRLMTQDFWENLFQLTLRAAGKTYMLFFVVVIFLGSFYLINLILAVVAMAYAEQNQASIDEQRQKDEEYQQILEALKVREEEVSGVFGAESLGQSLWAESFGQSLWGRVFLVGFVSVVDSEALG----KSVCLRSVSSVSEPEEERPCPPCWYWVSSRFLVWDCACWRPLQRVLYLIVMDPFVDLGITICIVLNTVFMAMEHY--------PMSQDFEHLLTIGNLVFTGIFTAEMVLKLLALDPYHYFQVGWNIFDCIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGRSYGECVCRIAEDCELPRWHMTDFFHSFLIIFRVLCGEWIETMWDCMEVSGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSAPEDDSENNLQIAVNRIQNGLDWTKTKVRDLVLKYWPHRQEPETSTTEVNQSDETKNEGEELVALTPVMSSGQSKDDRNSCYYDNIVALRVPLAPPESESESESELSD--QDQDEEVSSECSTVERNPVVVEEEEEEPDAPEDCCSENCYRRCPALDVDSSLGRGLIWTNFRKTCFSIVEHNYFETFIIFMILLSSGALAFEDIYLEQRRVVKIVLEFADQVFTYVFVVEMVLKWVAYGFKTYFTNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCSNETSGERFEPAEVENRSQCEELMLQHPGEVRWKNVKVNYDNVGMGYLSLLQVATFKGWMDIMYAAVDSREVESQPEYEASLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKIRGT-DIFMTEEQKKYYNAMKKLGSKKPQKPVPRPENWFQGLVFDLVTQQVFDVIIMILICLNMVTMMVETDEQSAEKEEILYWINLVFIVLFTGECSLKIIALRHHYFSLGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAMIDDMFNFEDFGNSMICLFMITTSAGWDGLLSPIMNTPPDCDPDLENPGSEVRGNCGSPGVGMIFFTSYIIMSFLVVVNMYIAIILENFNVATEESTDPLCEEDFDMFYETWEKYDPNATQFIHYSELSEFCDVLQDPLRIPKPNTLRLIQMDLPLVP----------GDKIHCLDILLALTAQVLGDSGEMDALKASMEEKFMANNPSKVPYEPISSTLKRRQEELAAIVIQRCYRRH 1670
BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Match: gi|1020411387|ref|XP_016124377.1| (PREDICTED: sodium channel protein type 4 subunit alpha B [Sinocyclocheilus grahami]) HSP 1 Score: 1330.08 bits (3441), Expect = 0.000e+0 Identity = 767/1729 (44.36%), Postives = 1054/1729 (60.96%), Query Frame = 0
Query: 11 PPT----FRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTE-YTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDF----HDNV--LFQNM------TTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAE---------------EEARKEMEELEAIQCAEEAAMTEAEA---------------------AAAEAVAHLSLLDF-----SLLGGKDNKGFETDSFQS-----------------------QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGI-TCVPYFLATVLIANLVILNLFLALLLSSFT-DMGGNKAEDHEKDKIQIAFER----IGW--CFRGGPFSKRNQEEKRKREALANSDDLDDSESMPNKDGYSDNYSK--------QDSIIGNGIDLGFSKGGLSDVYEEMGGSYDKTSETIVYNPT----------DEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAP---AEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNE-DNCDAPDSELGSP--GNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTT----FADRP---GYERVSSSVWKQRESYCASLIQRSFKYH 1609
PPT F PFT E L IE R+ + E+ QE +K S+IE E ++ +PS+ LE G LP YGD P L NVP+ ++DP+Y+ K+TF+VV+KG I+RF+A A + LSP +PIRR A+ +L H LFSMFI+ TIL NC M D ++ E VFT IYT+E+ +K+ +RG FT+LRD WNWLDF+VI M+YVT +DLG+ SALRTFRV RALK++ VIPGLKTIV A++ SVK L DV++LT+F L+VFAL+GLQ++MG L Q C+K F DN+ LF + T N N+ ++ N N+Y P + +LCGNSS AG CP+G+TCLK GPNPNYGYTS+D+F ++L FRLMTQD+WENL+Q+TLR AG +IFF+ IFLGSFYLINLILA+VAM+Y E Q +A E+ +K+ E+ ++ + +++ + ++ +L + D S + DN E + Q + + + +IV DPF +L I +CI +N FM ++HY M+P F +L+ GN FT IF E KL A+ P Y+F GWNIFD +IV +S VEL N+ GLS+LRSFRL+RVFKLAKSW +LN ++ I+GN++GAL NLT VL II+FIFAV+GMQLFG+SY + VC C LPRW+ TDF HSF+I+FR+LCGEWIE+MWDCM VA C+ F+ ++I NLV+LNLFLALLLSSF+ D +D E + +QIA R I W F G ++ K K E + +++D + N +S + K D GN K + ++ G T T+ P D + EDC R P + + + + W R ++E+ YFE+ ++ +IL+SS + EDI+ E + + L Y D++ T VF IE +K + GF YF NAWCWLDF+IV VSLI+ A++LG + K++RTLRALRPLRA+++ EGM+VVVNAL+GA+PSIFNVL+VCLIFWLIF+I+GVN G++Y C +S + + + + N + C E+ W+N +VTFDNV AT+KGW+D+M A+DS + QP E+N+YMYIYFV+FI+ GSFFTLNL +GVIID FN+QK K G T D FMTE+Q+KY AMKK +KKP K +PRP Q ++F ++T + FD+ +M I LNM+TMM + DQS +L +NL FIV+FT E +LK+ ALR+HYFS WN+FD VVV+LS+ GL L+D+IEKYFVSPTL RV+R+A+IGRVLRLI+GA+GIRTLLF+L+M+ PAL NI LLLFL+MFIFS+FGMS F VK G DD+ NF+TF + LF I TSAGW I N +CD GSP GNCG+ ++F Y+V++FL+++NMYIA+ILEN++ A+E+ + + ++D+E+FYE W +FDP +Q++ Y +L EF D L+ PL+I KPN K+I MD+P+V D ++C DIL LT + DS ++ +K T A+ P YE ++S++ +++E A IQ +++ H
Sbjct: 57 PPTGADVFHPFTLESLAEIERRMAE--------EATEQEQMKA--------------SNIEVPEEDLPKPSSDLEAGKVLPFIYGDPPPNLLNVPLEELDPFYKAKKTFIVVTKGNTIFRFNAEPACYILSPLNPIRRAAIRILIHKLFSMFIMLTILSNCVFMTMGDPPAWSKIVEYVFTGIYTFEALVKVLSRGFCRGDFTFLRDPWNWLDFMVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCIKSFAWSNSDNLTMLFNHTDINGTETANSTFNFQEYIENLENYYYVPGHMDPLLCGNSSDAGKCPEGYTCLKAGPNPNYGYTSYDSFAWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAE-QNEATIAEAKEKEEEYAKILEQLKKQAEQKNSMVNGSKTSLSSKNKDDDQIQNDYDGIALKPLSKSNGSKGSMNYLEVPDSQMRKPSAVSTTDNALDELEDIQRPCPPCWYKFADIFLKWDCCLPWVKFKKFICLIVMDPFVDLGITICIVLNTVFMAMEHY--------PMTPHFEHMLSVGNLVFTGIFTAEMVLKLIALDPYYYFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDCVCKISGDCELPRWHMTDFFHSFLIIFRILCGEWIETMWDCMEVADQGMCIVVFMMVMVIGNLVVLNLFLALLLSSFSGDNMSASDDDGEMNNLQIAVARMTRGIEWVKAFVIGHLTQ-CLGLKPKEEGVKADEEIDSKVATMN---FSLSVIKVPIANGESDDDDDGNSSSEDEDKEDVDKNSKKTDGDESSTCSTVDKAPEVVEVEEEEEEDSTVPEDCYTENCIRRCPCLELDVAQGKGKAWWNFRKTCFSIVEHSYFETFIIFMILLSSGALAFEDIYSEQRRMIKIILEYADQVFTYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNSTSEEVFPITKVNNRSECLELTEADPNVRWMNMKVTFDNVGMGYLSLLQVATFKGWMDIMYSAVDSRDVEMQPDYESNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGT-DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNCFQGLVFDLVTKQFFDIFIMVMICLNMVTMMVETDDQSEEKEHILFLINLVFIVLFTGECILKIIALRYHYFSIGWNIFDFVVVILSITGLLLADLIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFGYVKKEAGIDDMFNFETFGNSIICLFMITTSAGWDGLLAPILNSPPDCDPDVENPGSPVRGNCGNAAVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESSDPLCEDDFEMFYETWEKFDPTASQFIAYSRLSEFCDTLKDPLRIPKPNTLKLITMDLPMVP----------GDKIYCLDILLALTTEVLG-------DSDQMDAMKATMEEKFMANNPSKVSYEPITSTLRRKQEEVAALTIQSAYRKH 1732
BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Match: gi|1338788951|ref|XP_023691501.1| (sodium channel protein type 4 subunit alpha A-like isoform X7 [Paramormyrops kingsleyae]) HSP 1 Score: 1319.29 bits (3413), Expect = 0.000e+0 Identity = 757/1706 (44.37%), Postives = 1036/1706 (60.73%), Query Frame = 0
Query: 13 TFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLPRRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDT-EYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVK---DFHDNVLFQNMTTNGDLNWD--RWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSY----------------------DELQRQAEEE--------ARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKD--------------NKGFETDSFQSQVSEVLA-------------------------------------IIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGI-TCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFERIGWCFRGGPFSKRN--QEEKRKREALANSDDLDDSESMPNKDGYSDNYSKQDSIIGNGIDLGFSKGGLSDVYEEMGGSYDKTSETIVYNPTDEVLVEDCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTIC---REIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNED--NCDAPDSELGSP--GNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYHAS 1611
FR FT E L IE RI ++K K K D+E E E+ +PS+ LE G LP YGD P E+ N+P+ D+DP+Y+ ++TF+V+SKG IYRF+A A +FLSPF+ +RR A+ VL H LFSMFI+ TIL NC M + ++ + E VFT IYT+E+ IK+ +RG FT+LRD WNWLDF+VI M+YVT +DLG+ SALRTFRV RALK++ VIPGLKTIV A++ SVK L DV++LT+F LAVFAL+GLQ++MG L C++ + + LF + +D ++++ N Y ++CGNSS AG CP+G+TC+K G NPNYGYTS+D+FG ++L FRLMTQD+WENL+Q+TLR AG +IFF+ IFLGSFYLINLILA+VAM+Y ++L++Q ++ +K ++E + +E A+ + + ++ SL D G D K S S V+ VL +V DPF +L I +CI +N FM ++HY MS F +L+ GN FT IF E KL AM P Y+F GWNIFD +IV LS VEL N+ GLS+LRSFRLLRVFKLAKSW +LN ++ I+GN++GAL NLT VL II+FIFAV+GMQLFG++Y + VC C LPRW+ TDF HSF+IVFR+LCGEWIE+MWDCM VAG C+ F+ ++I NLV+LNLFLALLLSSF+ + +++ ++ +QIA RI RG F K +R A S++ DD E+ K K + + N + + + E D + E C + + PF + E ++W R ++E+ YFES ++ +IL+SS + ED++ E + + L Y D++ T VF +E +K + G+ YF NAWCWLDF+IV VSLI+ A+LLG + K++RTLRALRPLRA+++ EGM+VVVNAL+GA+PSIFNVL+VCLIFWLIF+I+GVN G++Y C++ G+ + +++ N T C E WVN ++ FDNV AT+KGW+D+M A+DS E QP E NIYMY+YFV+FI+ GSFFTLNL +GVIID FN+QK+K G D FMTE+Q+KY AMKK +KKP K +PRP Q ++F +T + FD+ +M I LNM+TMM + DQS +L +NL FIVVFT E +LKMFALR ++FS WN+FD VVV+LS+ GL L+DIIEKYFVSPTL RV+R+A+IGRVLRLI+GA+GIRTLLF+L+M+ PAL NI LLLFL+MFIFS+FGMS F VK G DD+ NF+TF + LF+I TSAGW L I N +CD GS GNCG+ ++F Y++++FL+++NMYIA+ILEN++ A+E+ E + ++D+E+FYE W +FDP+ TQ++ Y +LP+F + L+ PL+I KPNK K+I MDIPIV TG D + C DIL LT + +E YE +++++ ++RE A++IQR+++ + S
Sbjct: 66 AFRRFTPESLAEIERRILEEKPEKSK--------------------------DVEVAEEELPKPSSDLEAGKVLPFIYGDPPPEMMNIPLEDLDPFYKAQKTFIVISKGNTIYRFNAEPACYFLSPFNIVRRSAIRVLIHWLFSMFIMVTILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATIKILSRGFCIGSFTFLRDPWNWLDFMVITMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLAVFALVGLQLFMGNLRHKCIRWPPATNSSWLFNSTEDVNATQFDFTEYIDDIDNHYFLEGQVDALICGNSSDAGKCPEGYTCMKAGRNPNYGYTSYDSFGWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATIAEAKEKEEEYQKIMEQLKKQEAQKHGPKEKISGKKPENQVEGLGSKQELAIDKRNLGGRDDISMDSLSDAK--GRPDVKDEKLSREHLEEPGKQSRKASDASDVANVLEDLEEGQRPCPPRWYKFANNFLKWDCCTAWIVFKKWTYFVVMDPFVDLGITICIVLNTLFMAMEHY--------PMSESFAEMLSVGNLVFTGIFTAEMVFKLIAMDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCKISSDCELPRWHMTDFFHSFLIVFRILCGEWIETMWDCMEVAGQGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSASDEEGENNLQIAINRIT---RGINFIKAYIIGLIRRMLGRKAKSNEGDDDETGIIK-------KKVEEVADNAV-------------QSVTEEKVPEEEEEPEEEPDMIEPEPCFTDACFSRFPFLMVDVTEGKGKIWWNIRTTCLTIVEHNYFESFIIFMILLSSGALAFEDVYIEQRRVIKILLEYADQVFTYVFIVEMLLKWVAYGYKVYFTNAWCWLDFLIVDVSLISLTANLLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCLNVTAGEIFPLDIVNNKTECFALMEQHDDVRWVNLKINFDNVGMGYLSLLQVATFKGWMDIMYAAVDSREVEDQPEYEVNIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKSKFGGQ-DLFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNPVQGLVFDFVTKQFFDIFIMIMICLNMITMMVETDDQSEDKEMILFYINLIFIVVFTAECVLKMFALRQYFFSAGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFGYVKKEAGIDDIFNFETFGNSIICLFEITTSAGWDGLLLPIMNSGPPDCDPDIENPGSSVRGNCGNPAVGIVFFCGYIIMSFLVVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEKFDPDATQFLDYSRLPDFCETLKDPLRIAKPNKIKLITMDIPIV------TG----DKIHCLDILLALTTEVLGESDAMGALRESMEEKFKMNNPSPVVYEPITTTLRRKREEVAATVIQRAYRKYLS 1701
BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Match: gi|1041926760|ref|NP_001316111.1| (sodium channel protein para [Diaphorina citri] >gi|808890603|gb|AKE08292.1| voltage-gated sodium channel [Diaphorina citri]) HSP 1 Score: 1260.36 bits (3260), Expect = 0.000e+0 Identity = 667/1207 (55.26%), Postives = 844/1207 (69.93%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCN-PKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMG-GNKAEDHEKDKIQIAFERIG----W---CFRG--GPFSK--RNQ----------EEKRKREALANSDDLDDSESMP-----------NKDGYSDNYSK-QDSIIGNGIDLGFSKGGLSDV------------------------YEEMGGSYDKTSETIVYNPTDEVLVE-----------------------------DCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
++ E ++ +VFDPF ELFI LC N FM LDH+ ++ + M F L +GN FF+A FA+E+F KL AMSP+Y+F GWNIFDF+IV LS +EL E + GLS+LRSFRLLRVFKLAKSW +LN +++IMG TIGAL NLTFVLCIIIFIFAVMGMQLFG++Y +KV P + +PRWNFTDFMHSFMIVFRVLCGEWIESMWDC+ V ++C+P+FLATV+I NLV+LNLFLALLLS+F D + +KI AF RI W C R G RNQ + + E LA+ D D ++ + D S+ + K +++ IGN I L ++ + D + + S+ + ET++ T++++ E DCCP+ Y PF G+ + PFWQ W+ RL QLIENKYFE+ V+ +IL+SS + LED+ + +P L D LYY+DRI T +FFIE IK ++GF KYF NAWCWLDFVIV VSLINF ASLLGAG I FKTMRTLRALRPLRAM++++GM+VVVNAL+ A+PSIFNVL+VCLIFWLIFAI+GV G+Y+KC+D N G SHE+IP+ +C+ W NS + FD+V AT+KGWI +MNDAIDS E +QP RETNIYMY+YFV FI+ GSFFTLNL +GVIID FNEQK K G +L+ FMTEDQ+KY AMKK +KKPLKA+PRP W+PQAI+F V+T+KKFDM++M FIGLNMLTM DHY Q+ ++ VLDNLN FI++F++E LLK+FALR+HYF EPWNLFD VVV+LS+ GL LSDIIEKYFVSPTLLRVVRVAK+GRVLRL+KGA+GIRTLLF+L M+ PAL NI LLLFLVMFIF++FGMS F NVK +G DDV+NF+TF ++F LLFQ+ TSAGW I NE++CDAP E+G+PGNCG++ + F++ YLV++FLI+INMYIAVILENYSQA+EDVQEG+TD+DY+++YE+W++FDPEGTQY+ Y QL +FLDVLEPPLQI KPNK+KI+ MDIPI + D +FC DILD LT+DFFARKGN I+++ + +V T D GY+ VSS++W+QRE YCA LIQ +++ H
Sbjct: 801 KLQEWISFVVFDPFVELFITLCTVANTLFMALDHHEMDKN----MEKF----LKSGNLFFSATFAVEAFLKLMAMSPKYYFQVGWNIFDFIIVALSVLELSLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTIGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDKVSEFPGGE--MPRWNFTDFMHSFMIVFRVLCGEWIESMWDCLHVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADSDTNKIAEAFNRISRFIDWIKRCVRSFFGAIRNMLRNQIAAQAPINRDMDATRDEILADGIDYDKKDAFEVAIGDGMEFTIHGDMKSNKFRKSKNNCIGNSIGLDHTQDMILDQEYMFRKLDPDCISNKSYGSHKHHPFRQDTHSHKGSVETVIKEKTEDLVAEPEVPEEQNVVEEDVVLIGPDDGEEDAYPSDCCPDKCYVRFPFLAGDDDTPFWQGWANLRLKTFQLIENKYFETAVITMILLSSLALALEDVHLQNRPILQDILYYMDRIFTVIFFIEMLIKFLALGFAKYFTNAWCWLDFVIVMVSLINFIASLLGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDGN-GTTLSHEIIPDKNVCK--AENYTWENSPMNFDHVGKAYLCLFQVATFKGWIPIMNDAIDSRELNKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEVVTDKKFDMVIMLFIGLNMLTMTMDHYQQTELFSSVLDNLNAIFIIIFSSECLLKIFALRYHYFVEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMNVKEKSGIDDVYNFKTFFQSFILLFQMSTSAGWDGVLDGIINEEDCDAPVPEMGNPGNCGNSTVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLCDFLDVLEPPLQIHKPNKYKIVSMDIPICK----------GDMMFCVDILDALTKDFFARKGNPIEETGDLV-AEVNTRPDEAGYDPVSSTLWRQREEYCARLIQHAWRKH 1983 HSP 2 Score: 511.531 bits (1316), Expect = 6.495e-148 Identity = 261/445 (58.65%), Postives = 335/445 (75.28%), Query Frame = 0
Query: 8 AEAPPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLP-RRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDF--HDN--------VLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQ 440
+E FRPFTRE L I++RI ++++ +K+ E KR E + +G R R+ E D +E+E E +P LEQG LP R G FP ELA+ P+ DIDPYY +++TF+VVSKG I+RFSA +AL+ L PF+PIRR+A+ +L HPLFS+FII TIL NC +MI T STEV+FT IYT+ESA+K+ ARG + + FTYLRDAWNWLDF+VIA++YVT+ IDLG+ +ALRTFRV RALK+VA++PGLKTIV A++ SVKNLRDVI+LT+F L+VFAL+GLQIYMGVL+Q C++ + H+N VL+ N+T D +W+RW N SNW+ +K LCGNSSGAG C G+ CL+G GPNP+YGYT+FD F ++L AFRLMTQDYWENLYQ+ LR GPW+I+FFI IFLGSFYL+NLILAIVAMSYDELQ++
Sbjct: 10 SEERSLFRPFTRESLAAIDARIAEEQEKQKEFERKRAEGEQEYG---RKRKKKEIRYD-DEDEDEGPQPDATLEQGVPLPVRLQGSFPAELASTPLEDIDPYYENQKTFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIRRYPIHENGTLIEPEGVLYGNLT---DESWNRWNKNASNWFGE--ENKYPLCGNSSGAGQCEPGYVCLQGFGPNPDYGYTNFDTFAWAFLAAFRLMTQDYWENLYQLVLRAVGPWHIVFFIVIIFLGSFYLVNLILAIVAMSYDELQKK 445 HSP 3 Score: 165.236 bits (417), Expect = 5.960e-37 Identity = 147/633 (23.22%), Postives = 285/633 (45.02%), Query Frame = 0
Query: 184 VFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDL------GSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESN--WYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYW----------ENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPR-WNFTDFMHSFMIVFRVLCGEWIESMWDCMF---------------------VAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+FT I+ E IK A G Y +AW WLDF+++ +S + + L +F +RT R R L++++ + G++ +V+A++ ++ ++ +V+++ + +FA++G+Q++ G + CV T + ++ D+ V N W SP+N FD+ G +YLC F++ T W L + +R + ++F+F I GSF+ +NL + ++ +++E +++A + E MTE + A+ + K K ++ Q ++ +V D ++ I+L I +N+ MT+DHY + F+S+L N N F IF+ E K+ A+ YF + WN+FDFV+V+LS + L+ +I + L ++R ++ RV +L K K + +L + ++ AL N+ +L +++FIFA+ GM F N K K + +NF F SF+++F++ + + D + GIT + L+ ++I+ L+++N+++A++L +++ + E D + +E
Sbjct: 1322 IFTVIFFIEMLIKFLALGFA----KYFTNAWCWLDFVIVMVSLINFIASLLGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFK-CVDG-------NGTTLSHEIIPDKNVCKAENYTWENSPMN----------------------------------FDHVGKAYLCLFQVATFKGWIPIMNDAIDSRELNKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKA--------------GGSLEMFMTEDQKKYYNAMKKMG-------SKKPLKAIPRPRWRPQA--IVFEVVTDKKFDMVIMLFIGLNMLTMTMDHYQ--------QTELFSSVLDNLNAIFIIIFSSECLLKIFALRYHYF-VEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF--------MNVKEKSGIDDVYNFKTFFQSFILLFQMSTSAGWDGVLDGIINEEDCDAPVPEMGNPGNCGNSTVGIT---FLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYE 1865 HSP 4 Score: 78.1814 bits (191), Expect = 1.829e-10 Identity = 41/125 (32.80%), Postives = 76/125 (60.80%), Query Frame = 0
Query: 944 ILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRY-YKCI 1063
I TG++ E+++K+ + GFI Y +AW WLDF+++A++ + G L GN+ +RT R LR L+ +A + G+K +V A+I ++ ++ +V+++ + +FA++G+ MG KCI
Sbjct: 183 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNL---AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCI 301
BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Match: gi|1279741385|ref|XP_022915612.1| (sodium channel protein para isoform X14 [Onthophagus taurus]) HSP 1 Score: 1251.5 bits (3237), Expect = 0.000e+0 Identity = 670/1214 (55.19%), Postives = 832/1214 (68.53%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCN-PKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNK----AEDHEKDKIQIAFERI----GW-------CFRGGPFSKRNQEEKRKREALANS-----DDL-------------------DDSESMPNKDGYSDNYSKQDSIIGNGI-----------------DLGFSKGGLSD---------------------VYEEMG-GSYDKTSETIVYNPT----DEVLVE------------DCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
Q+ + ++ IVFDPF ELFI LCI VN FM LDH++ M+ L +GNYFFTA F +E+ KL AMSP+Y+F +GWNIFDF+IV LS +EL E + GLS+LRSFRLLRVFKLAKSW +LN +++IMG T+GAL NLTFVLCIIIFIFAVMGMQLFG++YV+ V P + LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCM V ++C+P+FLATV+I NLV+LNLFLALLLS+ G N D++ +KI AF+RI GW F+ F NQ + +A DDL D E + + D S N + IGN I G K D EE+G G+ D+ PT DE +E DC P Y+ PF G+ + PFWQ W R QLIENKYFE+ V+ +IL SS + LED+ +P L D LYY+DRI T +FF E IK ++GF KYF NAWCWLDF+IV VSLINF ASL GAG I FKTMRTLRALRPLRAM++++GM+VVVNAL+ A+PSIFNVL+VCLIFWLIFAI+GV G+Y+KC+D+N S+E+IP+ C+ W NSR+ FD+V AT+KGWI +MNDAIDS E +QP RETNIYMY+YFV FI+ GSFFTLNL +GVIID FNEQK K G +L+ FMTEDQ+KY AMKK +KKP+KA+PRP W+PQ I+F ++TNKKFDMI+M FIGLNMLTM DHY Q T+T +LDNLN+ FIV+F+TE L+KMFALR+HYF+EPWNLFDLVVV+LS+ GL LSDIIEKYFVSPTLLRVVRVAK+GRVLRL+KGA+GIRTLLF+L M+ PAL NI LLLFLVMFIF++FGMS F +VK +G DDV+NF+TF ++ LLFQ+ TSAGW I NE+ C PD+E+G GNCG++ + F++ YLV++FLI+INMYIAVILENYSQA+EDVQEG+TD+DY+++YE+W++FDP+GTQY+ Y QL EFLDVLEPPLQI KPNK+KI+ MDIPI + D +FC DILD LT+DFFARKGN I+++ +E +V + PGY++VSS++W+QRE YCA LIQ +++ H
Sbjct: 765 QLQKFVSFIVFDPFVELFITLCIVVNTLFMALDHHD--------MNKDLEKALKSGNYFFTATFMIEATMKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDNVDRFPDHE--LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSN---FGSNSLSAPTADNDTNKIAEAFDRIGRFIGWIKSTIRNVFKLVRFKLTNQISDQPSDARDGGLELTGDDLMADGIIKKSPKDKLEVTIGDGMEFIIHGDKRSKNTINKSKTIGNSIIEHGNYMGHTDDQISNKSYGSHKHRFKDESHKGSTKSLDQDDQEEKRDASKEELGYGTEDEDQCECDRKPTSNLIDEAAIEAADTEDIIEYSADCFPEGCYKKFPFLAGDEDSPFWQGWGNLRFKTFQLIENKYFETAVITMILTSSLALALEDVHLSQRPILQDILYYMDRIFTVIFFFEMLIKWLALGFQKYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANK-TTLSYEIIPDYNACK--AENYTWENSRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPMKAIPRPRWRPQGIVFEIVTNKKFDMIIMLFIGLNMLTMTMDHYQQKQTFTQILDNLNMIFIVIFSTECLMKMFALRYHYFTEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDRSGLDDVYNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEECKQPDNEIGETGNCGNSTIGIAFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIVSMDIPICK----------GDLMFCVDILDALTKDFFARKGNAIEEA--VELGEVQPKPNIPGYDQVSSTLWRQREEYCARLIQNAWRKH 1950 HSP 2 Score: 513.072 bits (1320), Expect = 1.544e-148 Identity = 268/461 (58.13%), Postives = 340/461 (73.75%), Query Frame = 0
Query: 9 EAPPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLP-RRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAE 467
E FRPFTRE IE+RI ++ +K+ E KR E FG + ++ ED E+E E +P LEQG +P R FP ELA+ P+ DIDP+Y ++RTF+V+SKG I+RFSA NAL+ L PF+PIRR+A+ +L HPLFS+FII TIL+NC +MI T STEV+FT IYT+ESA+K+ ARG + FTYLRDAWNWLDF+VIA++YVT+ IDLG+ +ALRTFRV RALK+VA++PGLKTIV A++ SVKNLRDVI+LT+F L+VFAL+GLQIYMGVL+Q C++ F + + N T NW R+ +NESNWY + N LCGNSSGAG C +G+ CL+G G NPNYGYTSFD FG ++L AFRLMTQDYWENLYQ+ LR+AGPW+++FFI IFLGSFYL+NLILAIVAMSYDELQ++AEEE E + ++ Q A+ A AE
Sbjct: 11 EERSLFRPFTRESFAAIETRIAEEYAKQKELEKKRAEGEPGFGRRKKKKEIRYED----EDEDEGPQPDQTLEQGLPIPVRLQSSFPPELASTPLEDIDPFYSNQRTFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIRIFPTDGSWGNCTHE---NWFRFNSNESNWYEA--NGDYPLCGNSSGAGQCQEGYMCLQGFGDNPNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEQAIKDAQDAQLAKQQRAE 462 HSP 3 Score: 158.303 bits (399), Expect = 6.484e-35 Identity = 143/633 (22.59%), Postives = 281/633 (44.39%), Query Frame = 0
Query: 184 VFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDL------GSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYW----------ENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQ--VSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLF----GQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVA------------------GITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+FT I+ +E IK A G Y +AW WLDF+++ +S + + L +F +RT R R L++++ + G++ +V+A++ ++ ++ +V+++ + +FA++G+Q++ G + CV N TT L+++ + PD C +FD+ G +YLC F++ T W L + +R + ++F+F I GSF+ +NL + ++ +++E +++A + E MTE + A+ + K K ++ Q V E++ FD + I+L I +N+ MT+DHY FT +L N N F IF+ E K+ A+ YF T+ WN+FD V+V+LS + L+ +I + L ++R ++ RV +L K K + +L + ++ AL N+ +L +++FIFA+ GM F +S ++ V +NF F S +++F++ + + D + + + L+ ++I+ L+++N+++A++L +++ + E D + +E
Sbjct: 1290 IFTVIFFFEMLIKWLALGFQ----KYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFK-CVD--------ANKTT---LSYE----------------------------IIPDYNACKAENYTWENSRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKA--------------GGSLEMFMTEDQKKYYNAMKKMG-------SKKPMKAIPRPRWRPQGIVFEIVTNKKFD----MIIMLFIGLNMLTMTMDHYQ--------QKQTFTQILDNLNMIFIVIFSTECLMKMFALRYHYF-TEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDRSGLDDV-----------YNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEECKQPDNEIGETGNCGNSTIGIAFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYE 1833 HSP 4 Score: 78.5666 bits (192), Expect = 1.199e-10 Identity = 50/175 (28.57%), Postives = 95/175 (54.29%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMG-RYYKCI 1063
R + ++ + F ++ ILV+ +M + T P + + I TG++ E+++K+ + GFI Y +AW WLDFV++A++ + G L GN+ +RT R LR L+ +A + G+K +V A+I ++ ++ +V+++ + +FA++G+ MG KCI
Sbjct: 142 RRVAIYILVHPLFSLFIITTILVNCILMIMP-----TTP----TVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL---GNL---AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCI 301 HSP 5 Score: 70.4774 bits (171), Expect = 4.042e-8 Identity = 69/311 (22.19%), Postives = 126/311 (40.51%), Query Frame = 0
Query: 502 VSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIF---IFAVMGMQLF----------------------------------------------GQSYVEKVCNPKWKCVL-----PRWNFTDFMH---SFMIVFRVLCGEWIESMWDCMF-VAGITCVPYFLATVLIANLVILNLFLALLLSSFTDM 750
+ V I+ P LFII I VN M + T + + FT I+ ES K+ A + P + D WN DFV++ L++V + ++ L+ LR+FR+LR K L TI+G I ++ NL V+ + +F +FA+MG+Q++ G S C + C+ P + +T F +F+ FR++ ++ E+++ + AG + +F+ + + + ++NL LA++ S+ ++
Sbjct: 141 IRRVAIYILVHPLFSLFIITTILVNCILMIMPT---------------TPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTM-GIDLGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIRIFPTDGSWGNCTHENWFRFNSNESNWYEANGDYPLCGNSSGAGQCQEGYMCLQGFGDNPNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDEL 432 HSP 6 Score: 69.707 bits (169), Expect = 5.661e-8 Identity = 77/365 (21.10%), Postives = 143/365 (39.18%), Query Frame = 0
Query: 433 SYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAA-----AAEAVAHLSLLDFSLLGGKDNKGF-------ETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAE-----NISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVE--------------------KVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFVAGITCVP----------YFLATVLIANLVILNLFLALLLSSFTD 749
S +EL E+E + E + +EAA+ A+ +A+ F L G ++ F +FQ ++ + + E +I I + + L+ ++ P +L + FT IF E K A+ + +FT+ W DF+IV +S + +A I +R+ R LR + + + ++ + I ++ N+ V I IFA+MG+QLF Y + K N W+ R NF +++ +F+V + WI+ M D + + P YF+ ++ + LNLF+ +++ +F +
Sbjct: 1167 SKEELGYGTEDEDQCECDRKPTSNLIDEAAIEAADTEDIIEYSADCFPEGCYKKFPFLAGDEDSPFWQGWGNLRFKTFQ---------LIENKYFETAVITMILTSSLALALEDVHL------SQRPILQDILYYMDRIFTVIFFFEMLIKWLALGFQKYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSYEIIPDYNACKAENYTWEN--SRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNE 1514
BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Match: gi|1279741381|ref|XP_022915610.1| (sodium channel protein para isoform X12 [Onthophagus taurus]) HSP 1 Score: 1251.11 bits (3236), Expect = 0.000e+0 Identity = 670/1214 (55.19%), Postives = 832/1214 (68.53%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCN-PKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNK----AEDHEKDKIQIAFERI----GW-------CFRGGPFSKRNQEEKRKREALANS-----DDL-------------------DDSESMPNKDGYSDNYSKQDSIIGNGI-----------------DLGFSKGGLSD---------------------VYEEMG-GSYDKTSETIVYNPT----DEVLVE------------DCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
Q+ + ++ IVFDPF ELFI LCI VN FM LDH++ M+ L +GNYFFTA F +E+ KL AMSP+Y+F +GWNIFDF+IV LS +EL E + GLS+LRSFRLLRVFKLAKSW +LN +++IMG T+GAL NLTFVLCIIIFIFAVMGMQLFG++YV+ V P + LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCM V ++C+P+FLATV+I NLV+LNLFLALLLS+ G N D++ +KI AF+RI GW F+ F NQ + +A DDL D E + + D S N + IGN I G K D EE+G G+ D+ PT DE +E DC P Y+ PF G+ + PFWQ W R QLIENKYFE+ V+ +IL SS + LED+ +P L D LYY+DRI T +FF E IK ++GF KYF NAWCWLDF+IV VSLINF ASL GAG I FKTMRTLRALRPLRAM++++GM+VVVNAL+ A+PSIFNVL+VCLIFWLIFAI+GV G+Y+KC+D+N S+E+IP+ C+ W NSR+ FD+V AT+KGWI +MNDAIDS E +QP RETNIYMY+YFV FI+ GSFFTLNL +GVIID FNEQK K G +L+ FMTEDQ+KY AMKK +KKP+KA+PRP W+PQ I+F ++TNKKFDMI+M FIGLNMLTM DHY Q T+T +LDNLN+ FIV+F+TE L+KMFALR+HYF+EPWNLFDLVVV+LS+ GL LSDIIEKYFVSPTLLRVVRVAK+GRVLRL+KGA+GIRTLLF+L M+ PAL NI LLLFLVMFIF++FGMS F +VK +G DDV+NF+TF ++ LLFQ+ TSAGW I NE+ C PD+E+G GNCG++ + F++ YLV++FLI+INMYIAVILENYSQA+EDVQEG+TD+DY+++YE+W++FDP+GTQY+ Y QL EFLDVLEPPLQI KPNK+KI+ MDIPI + D +FC DILD LT+DFFARKGN I+++ +E +V + PGY++VSS++W+QRE YCA LIQ +++ H
Sbjct: 771 QLQKFVSFIVFDPFVELFITLCIVVNTLFMALDHHD--------MNKDLEKALKSGNYFFTATFMIEATMKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDNVDRFPDHE--LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSN---FGSNSLSAPTADNDTNKIAEAFDRIGRFIGWIKSTIRNVFKLVRFKLTNQISDQPSDARDGGLELTGDDLMADGIIKKSPKDKLEVTIGDGMEFIIHGDKRSKNTINKSKTIGNSIIEHGNYMGHTDDQISNKSYGSHKHRFKDESHKGSTKSLDQDDQEEKRDASKEELGYGTEDEDQCECDRKPTSNLIDEAAIEAADTEDIIEYSADCFPEGCYKKFPFLAGDEDSPFWQGWGNLRFKTFQLIENKYFETAVITMILTSSLALALEDVHLSQRPILQDILYYMDRIFTVIFFFEMLIKWLALGFQKYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANK-TTLSYEIIPDYNACK--AENYTWENSRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPMKAIPRPRWRPQGIVFEIVTNKKFDMIIMLFIGLNMLTMTMDHYQQKQTFTQILDNLNMIFIVIFSTECLMKMFALRYHYFTEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDRSGLDDVYNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEECKQPDNEIGETGNCGNSTIGIAFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIVSMDIPICK----------GDLMFCVDILDALTKDFFARKGNAIEEA--VELGEVQPKPNIPGYDQVSSTLWRQREEYCARLIQNAWRKH 1956 HSP 2 Score: 513.072 bits (1320), Expect = 1.889e-148 Identity = 268/461 (58.13%), Postives = 340/461 (73.75%), Query Frame = 0
Query: 9 EAPPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLP-RRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAE 467
E FRPFTRE IE+RI ++ +K+ E KR E FG + ++ ED E+E E +P LEQG +P R FP ELA+ P+ DIDP+Y ++RTF+V+SKG I+RFSA NAL+ L PF+PIRR+A+ +L HPLFS+FII TIL+NC +MI T STEV+FT IYT+ESA+K+ ARG + FTYLRDAWNWLDF+VIA++YVT+ IDLG+ +ALRTFRV RALK+VA++PGLKTIV A++ SVKNLRDVI+LT+F L+VFAL+GLQIYMGVL+Q C++ F + + N T NW R+ +NESNWY + N LCGNSSGAG C +G+ CL+G G NPNYGYTSFD FG ++L AFRLMTQDYWENLYQ+ LR+AGPW+++FFI IFLGSFYL+NLILAIVAMSYDELQ++AEEE E + ++ Q A+ A AE
Sbjct: 11 EERSLFRPFTRESFAAIETRIAEEYAKQKELEKKRAEGEPGFGRRKKKKEIRYED----EDEDEGPQPDQTLEQGLPIPVRLQSSFPPELASTPLEDIDPFYSNQRTFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIRIFPTDGSWGNCTHE---NWFRFNSNESNWYEA--NGDYPLCGNSSGAGQCQEGYMCLQGFGDNPNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEQAIKDAQDAQLAKQQRAE 462 HSP 3 Score: 158.303 bits (399), Expect = 7.008e-35 Identity = 143/633 (22.59%), Postives = 281/633 (44.39%), Query Frame = 0
Query: 184 VFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDL------GSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYW----------ENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQ--VSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLF----GQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVA------------------GITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+FT I+ +E IK A G Y +AW WLDF+++ +S + + L +F +RT R R L++++ + G++ +V+A++ ++ ++ +V+++ + +FA++G+Q++ G + CV N TT L+++ + PD C +FD+ G +YLC F++ T W L + +R + ++F+F I GSF+ +NL + ++ +++E +++A + E MTE + A+ + K K ++ Q V E++ FD + I+L I +N+ MT+DHY FT +L N N F IF+ E K+ A+ YF T+ WN+FD V+V+LS + L+ +I + L ++R ++ RV +L K K + +L + ++ AL N+ +L +++FIFA+ GM F +S ++ V +NF F S +++F++ + + D + + + L+ ++I+ L+++N+++A++L +++ + E D + +E
Sbjct: 1296 IFTVIFFFEMLIKWLALGFQ----KYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFK-CVD--------ANKTT---LSYE----------------------------IIPDYNACKAENYTWENSRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKA--------------GGSLEMFMTEDQKKYYNAMKKMG-------SKKPMKAIPRPRWRPQGIVFEIVTNKKFD----MIIMLFIGLNMLTMTMDHYQ--------QKQTFTQILDNLNMIFIVIFSTECLMKMFALRYHYF-TEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDRSGLDDV-----------YNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEECKQPDNEIGETGNCGNSTIGIAFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYE 1839 HSP 4 Score: 78.5666 bits (192), Expect = 1.169e-10 Identity = 50/175 (28.57%), Postives = 95/175 (54.29%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMG-RYYKCI 1063
R + ++ + F ++ ILV+ +M + T P + + I TG++ E+++K+ + GFI Y +AW WLDFV++A++ + G L GN+ +RT R LR L+ +A + G+K +V A+I ++ ++ +V+++ + +FA++G+ MG KCI
Sbjct: 142 RRVAIYILVHPLFSLFIITTILVNCILMIMP-----TTP----TVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL---GNL---AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCI 301 HSP 5 Score: 70.4774 bits (171), Expect = 4.218e-8 Identity = 69/311 (22.19%), Postives = 126/311 (40.51%), Query Frame = 0
Query: 502 VSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIF---IFAVMGMQLF----------------------------------------------GQSYVEKVCNPKWKCVL-----PRWNFTDFMH---SFMIVFRVLCGEWIESMWDCMF-VAGITCVPYFLATVLIANLVILNLFLALLLSSFTDM 750
+ V I+ P LFII I VN M + T + + FT I+ ES K+ A + P + D WN DFV++ L++V + ++ L+ LR+FR+LR K L TI+G I ++ NL V+ + +F +FA+MG+Q++ G S C + C+ P + +T F +F+ FR++ ++ E+++ + AG + +F+ + + + ++NL LA++ S+ ++
Sbjct: 141 IRRVAIYILVHPLFSLFIITTILVNCILMIMPT---------------TPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTM-GIDLGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIRIFPTDGSWGNCTHENWFRFNSNESNWYEANGDYPLCGNSSGAGQCQEGYMCLQGFGDNPNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDEL 432 HSP 6 Score: 69.707 bits (169), Expect = 6.008e-8 Identity = 77/365 (21.10%), Postives = 143/365 (39.18%), Query Frame = 0
Query: 433 SYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAA-----AAEAVAHLSLLDFSLLGGKDNKGF-------ETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAE-----NISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVE--------------------KVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFVAGITCVP----------YFLATVLIANLVILNLFLALLLSSFTD 749
S +EL E+E + E + +EAA+ A+ +A+ F L G ++ F +FQ ++ + + E +I I + + L+ ++ P +L + FT IF E K A+ + +FT+ W DF+IV +S + +A I +R+ R LR + + + ++ + I ++ N+ V I IFA+MG+QLF Y + K N W+ R NF +++ +F+V + WI+ M D + + P YF+ ++ + LNLF+ +++ +F +
Sbjct: 1173 SKEELGYGTEDEDQCECDRKPTSNLIDEAAIEAADTEDIIEYSADCFPEGCYKKFPFLAGDEDSPFWQGWGNLRFKTFQ---------LIENKYFETAVITMILTSSLALALEDVHL------SQRPILQDILYYMDRIFTVIFFFEMLIKWLALGFQKYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSYEIIPDYNACKAENYTWEN--SRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNE 1520
BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Match: gi|1279741387|ref|XP_022915613.1| (sodium channel protein para isoform X15 [Onthophagus taurus]) HSP 1 Score: 1250.73 bits (3235), Expect = 0.000e+0 Identity = 667/1204 (55.40%), Postives = 838/1204 (69.60%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCN-PKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNK----AEDHEKDKIQIAFERIG----W-------CFRGGPFSKRNQ-EEKRKREALANS---DDLDDSESMPNKDGYSDNYSKQ------DSIIGNGID---------LGFSKGGLSD---------------------------------VYEEMG-GSYDKTSETIVYNPT----DEVLVE------------DCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
Q+ + ++ IVFDPF ELFI LCI VN FM LDH++ M+ L +GNYFFTA F +E+ KL AMSP+Y+F +GWNIFDF+IV LS +EL E + GLS+LRSFRLLRVFKLAKSW +LN +++IMG T+GAL NLTFVLCIIIFIFAVMGMQLFG++YV+ V P + LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCM V ++C+P+FLATV+I NLV+LNLFLALLLS+ G N D++ +KI AF+RIG W F+ F NQ ++ E +NS D D + D +D K+ + IG+G++ +G + +S+ EE+G G+ D+ PT DE +E DC P Y+ PF G+ + PFWQ W R QLIENKYFE+ V+ +IL SS + LED+ +P L D LYY+DRI T +FF E IK ++GF KYF NAWCWLDF+IV VSLINF ASL GAG I FKTMRTLRALRPLRAM++++GM+VVVNAL+ A+PSIFNVL+VCLIFWLIFAI+GV G+Y+KC+D+N S+E+IP+ C+ W NSR+ FD+V AT+KGWI +MNDAIDS E +QP RETNIYMY+YFV FI+ GSFFTLNL +GVIID FNEQK K G +L+ FMTEDQ+KY AMKK +KKP+KA+PRP W+PQ I+F ++TNKKFDMI+M FIGLNMLTM DHY Q T+T +LDNLN+ FIV+F+TE L+KMFALR+HYF+EPWNLFDLVVV+LS+ GL LSDIIEKYFVSPTLLRVVRVAK+GRVLRL+KGA+GIRTLLF+L M+ PAL NI LLLFLVMFIF++FGMS F +VK +G DDV+NF+TF ++ LLFQ+ TSAGW I NE+ C PD+E+G GNCG++ + F++ YLV++FLI+INMYIAVILENYSQA+EDVQEG+TD+DY+++YE+W++FDP+GTQY+ Y QL EFLDVLEPPLQI KPNK+KI+ MDIPI + D +FC DILD LT+DFFARKGN I+++ +E +V + PGY++VSS++W+QRE YCA LIQ +++ H
Sbjct: 771 QLQKFVSFIVFDPFVELFITLCIVVNTLFMALDHHD--------MNKDLEKALKSGNYFFTATFMIEATMKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDNVDRFPDHE--LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSN---FGSNSLSAPTADNDTNKIAEAFDRIGRFIGWIKSTIRNVFKLVRFKLTNQISDQPSGEGPSNSWNQDARDGGLELTGDDLMADGIIKKSPKDKLEVTIGDGMEFIIHEHGNYMGHTDDQISNKSYGSHKHRFKDESHKGSTKSLDQDDQEEKRDASKEELGYGTEDEDQCECDRKPTSNLIDEAAIEAADTEDIIEYSADCFPEGCYKKFPFLAGDEDSPFWQGWGNLRFKTFQLIENKYFETAVITMILTSSLALALEDVHLSQRPILQDILYYMDRIFTVIFFFEMLIKWLALGFQKYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANK-TTLSYEIIPDYNACK--AENYTWENSRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPMKAIPRPRWRPQGIVFEIVTNKKFDMIIMLFIGLNMLTMTMDHYQQKQTFTQILDNLNMIFIVIFSTECLMKMFALRYHYFTEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDRSGLDDVYNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEECKQPDNEIGETGNCGNSTIGIAFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIVSMDIPICK----------GDLMFCVDILDALTKDFFARKGNAIEEA--VELGEVQPKPNIPGYDQVSSTLWRQREEYCARLIQNAWRKH 1946 HSP 2 Score: 512.301 bits (1318), Expect = 2.682e-148 Identity = 268/461 (58.13%), Postives = 340/461 (73.75%), Query Frame = 0
Query: 9 EAPPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLP-RRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAE 467
E FRPFTRE IE+RI ++ +K+ E KR E FG + ++ ED E+E E +P LEQG +P R FP ELA+ P+ DIDP+Y ++RTF+V+SKG I+RFSA NAL+ L PF+PIRR+A+ +L HPLFS+FII TIL+NC +MI T STEV+FT IYT+ESA+K+ ARG + FTYLRDAWNWLDF+VIA++YVT+ IDLG+ +ALRTFRV RALK+VA++PGLKTIV A++ SVKNLRDVI+LT+F L+VFAL+GLQIYMGVL+Q C++ F + + N T NW R+ +NESNWY + N LCGNSSGAG C +G+ CL+G G NPNYGYTSFD FG ++L AFRLMTQDYWENLYQ+ LR+AGPW+++FFI IFLGSFYL+NLILAIVAMSYDELQ++AEEE E + ++ Q A+ A AE
Sbjct: 11 EERSLFRPFTRESFAAIETRIAEEYAKQKELEKKRAEGEPGFGRRKKKKEIRYED----EDEDEGPQPDQTLEQGLPIPVRLQSSFPPELASTPLEDIDPFYSNQRTFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIRIFPTDGSWGNCTHE---NWFRFNSNESNWYEA--NGDYPLCGNSSGAGQCQEGYMCLQGFGDNPNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEQAIKDAQDAQLAKQQRAE 462 HSP 3 Score: 157.918 bits (398), Expect = 9.557e-35 Identity = 143/633 (22.59%), Postives = 281/633 (44.39%), Query Frame = 0
Query: 184 VFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDL------GSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYW----------ENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQ--VSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLF----GQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVA------------------GITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+FT I+ +E IK A G Y +AW WLDF+++ +S + + L +F +RT R R L++++ + G++ +V+A++ ++ ++ +V+++ + +FA++G+Q++ G + CV N TT L+++ + PD C +FD+ G +YLC F++ T W L + +R + ++F+F I GSF+ +NL + ++ +++E +++A + E MTE + A+ + K K ++ Q V E++ FD + I+L I +N+ MT+DHY FT +L N N F IF+ E K+ A+ YF T+ WN+FD V+V+LS + L+ +I + L ++R ++ RV +L K K + +L + ++ AL N+ +L +++FIFA+ GM F +S ++ V +NF F S +++F++ + + D + + + L+ ++I+ L+++N+++A++L +++ + E D + +E
Sbjct: 1286 IFTVIFFFEMLIKWLALGFQ----KYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFK-CVD--------ANKTT---LSYE----------------------------IIPDYNACKAENYTWENSRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKA--------------GGSLEMFMTEDQKKYYNAMKKMG-------SKKPMKAIPRPRWRPQGIVFEIVTNKKFD----MIIMLFIGLNMLTMTMDHYQ--------QKQTFTQILDNLNMIFIVIFSTECLMKMFALRYHYF-TEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDRSGLDDV-----------YNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEECKQPDNEIGETGNCGNSTIGIAFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYE 1829 HSP 4 Score: 78.5666 bits (192), Expect = 1.282e-10 Identity = 50/175 (28.57%), Postives = 95/175 (54.29%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMG-RYYKCI 1063
R + ++ + F ++ ILV+ +M + T P + + I TG++ E+++K+ + GFI Y +AW WLDFV++A++ + G L GN+ +RT R LR L+ +A + G+K +V A+I ++ ++ +V+++ + +FA++G+ MG KCI
Sbjct: 142 RRVAIYILVHPLFSLFIITTILVNCILMIMP-----TTP----TVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL---GNL---AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCI 301 HSP 5 Score: 70.0922 bits (170), Expect = 4.623e-8 Identity = 69/311 (22.19%), Postives = 126/311 (40.51%), Query Frame = 0
Query: 502 VSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIF---IFAVMGMQLF----------------------------------------------GQSYVEKVCNPKWKCVL-----PRWNFTDFMH---SFMIVFRVLCGEWIESMWDCMF-VAGITCVPYFLATVLIANLVILNLFLALLLSSFTDM 750
+ V I+ P LFII I VN M + T + + FT I+ ES K+ A + P + D WN DFV++ L++V + ++ L+ LR+FR+LR K L TI+G I ++ NL V+ + +F +FA+MG+Q++ G S C + C+ P + +T F +F+ FR++ ++ E+++ + AG + +F+ + + + ++NL LA++ S+ ++
Sbjct: 141 IRRVAIYILVHPLFSLFIITTILVNCILMIMPT---------------TPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTM-GIDLGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIRIFPTDGSWGNCTHENWFRFNSNESNWYEANGDYPLCGNSSGAGQCQEGYMCLQGFGDNPNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDEL 432 HSP 6 Score: 69.707 bits (169), Expect = 6.586e-8 Identity = 77/365 (21.10%), Postives = 143/365 (39.18%), Query Frame = 0
Query: 433 SYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAA-----AAEAVAHLSLLDFSLLGGKDNKGF-------ETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAE-----NISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVE--------------------KVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFVAGITCVP----------YFLATVLIANLVILNLFLALLLSSFTD 749
S +EL E+E + E + +EAA+ A+ +A+ F L G ++ F +FQ ++ + + E +I I + + L+ ++ P +L + FT IF E K A+ + +FT+ W DF+IV +S + +A I +R+ R LR + + + ++ + I ++ N+ V I IFA+MG+QLF Y + K N W+ R NF +++ +F+V + WI+ M D + + P YF+ ++ + LNLF+ +++ +F +
Sbjct: 1163 SKEELGYGTEDEDQCECDRKPTSNLIDEAAIEAADTEDIIEYSADCFPEGCYKKFPFLAGDEDSPFWQGWGNLRFKTFQ---------LIENKYFETAVITMILTSSLALALEDVHL------SQRPILQDILYYMDRIFTVIFFFEMLIKWLALGFQKYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSYEIIPDYNACKAENYTWEN--SRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNE 1510
BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Match: gi|1279741389|ref|XP_022915614.1| (sodium channel protein para isoform X16 [Onthophagus taurus]) HSP 1 Score: 1250.34 bits (3234), Expect = 0.000e+0 Identity = 670/1214 (55.19%), Postives = 832/1214 (68.53%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCN-PKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNK----AEDHEKDKIQIAFERI----GW-------CFRGGPFSKRNQEEKRKREALANS-----DDL-------------------DDSESMPNKDGYSDNYSKQDSIIGNGI-----------------DLGFSKGGLSD---------------------VYEEMG-GSYDKTSETIVYNPT----DEVLVE------------DCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYH 1609
Q+ + ++ IVFDPF ELFI LCI VN FM LDH++ M+ L +GNYFFTA F +E+ KL AMSP+Y+F +GWNIFDF+IV LS +EL E + GLS+LRSFRLLRVFKLAKSW +LN +++IMG T+GAL NLTFVLCIIIFIFAVMGMQLFG++YV+ V P + LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCM V ++C+P+FLATV+I NLV+LNLFLALLLS+ G N D++ +KI AF+RI GW F+ F NQ + +A DDL D E + + D S N + IGN I G K D EE+G G+ D+ PT DE +E DC P Y+ PF G+ + PFWQ W R QLIENKYFE+ V+ +IL SS + LED+ +P L D LYY+DRI T +FF E IK ++GF KYF NAWCWLDF+IV VSLINF ASL GAG I FKTMRTLRALRPLRAM++++GM+VVVNAL+ A+PSIFNVL+VCLIFWLIFAI+GV G+Y+KC+D+N S+E+IP+ C+ W NSR+ FD+V AT+KGWI +MNDAIDS E +QP RETNIYMY+YFV FI+ GSFFTLNL +GVIID FNEQK K G +L+ FMTEDQ+KY AMKK +KKP+KA+PRP W+PQ I+F ++TNKKFDMI+M FIGLNMLTM DHY Q T+T +LDNLN+ FIV+F+TE L+KMFALR+HYF+EPWNLFDLVVV+LS+ GL LSDIIEKYFVSPTLLRVVRVAK+GRVLRL+KGA+GIRTLLF+L M+ PAL NI LLLFLVMFIF++FGMS F +VK +G DDV+NF+TF ++ LLFQ+ TSAGW I NE+ C PD+E+G GNCG++ + F++ YLV++FLI+INMYIAVILENYSQA+EDVQEG+TD+DY+++YE+W++FDP+GTQY+ Y QL EFLDVLEPPLQI KPNK+KI+ MDIPI + D +FC DILD LT+DFFARKGN I+++ +E +V + PGY++VSS++W+QRE YCA LIQ +++ H
Sbjct: 754 QLQKFVSFIVFDPFVELFITLCIVVNTLFMALDHHD--------MNKDLEKALKSGNYFFTATFMIEATMKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDNVDRFPDHE--LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSN---FGSNSLSAPTADNDTNKIAEAFDRIGRFIGWIKSTIRNVFKLVRFKLTNQISDQPSDARDGGLELTGDDLMADGIIKKSPKDKLEVTIGDGMEFIIHGDKRSKNTINKSKTIGNSIIEHGNYMGHTDDQISNKSYGSHKHRFKDESHKGSTKSLDQDDQEEKRDASKEELGYGTEDEDQCECDRKPTSNLIDEAAIEAADTEDIIEYSADCFPEGCYKKFPFLAGDEDSPFWQGWGNLRFKTFQLIENKYFETAVITMILTSSLALALEDVHLSQRPILQDILYYMDRIFTVIFFFEMLIKWLALGFQKYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANK-TTLSYEIIPDYNACK--AENYTWENSRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPMKAIPRPRWRPQGIVFEIVTNKKFDMIIMLFIGLNMLTMTMDHYQQKQTFTQILDNLNMIFIVIFSTECLMKMFALRYHYFTEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDRSGLDDVYNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEECKQPDNEIGETGNCGNSTIGIAFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIVSMDIPICK----------GDLMFCVDILDALTKDFFARKGNAIEEA--VELGEVQPKPNIPGYDQVSSTLWRQREEYCARLIQNAWRKH 1939 HSP 2 Score: 504.212 bits (1297), Expect = 1.957e-145 Identity = 266/461 (57.70%), Postives = 336/461 (72.89%), Query Frame = 0
Query: 9 EAPPTFRPFTREELQIIESRIQQKKDNKKKRESKRQENIKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLP-RRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAE 467
E FRPFTRE IE+RI ++ +K+ E KR A YE+ E+E E +P LEQG +P R FP ELA+ P+ DIDP+Y ++RTF+V+SKG I+RFSA NAL+ L PF+PIRR+A+ +L HPLFS+FII TIL+NC +MI T STEV+FT IYT+ESA+K+ ARG + FTYLRDAWNWLDF+VIA++YVT+ IDLG+ +ALRTFRV RALK+VA++PGLKTIV A++ SVKNLRDVI+LT+F L+VFAL+GLQIYMGVL+Q C++ F + + N T NW R+ +NESNWY + N LCGNSSGAG C +G+ CL+G G NPNYGYTSFD FG ++L AFRLMTQDYWENLYQ+ LR+AGPW+++FFI IFLGSFYL+NLILAIVAMSYDELQ++AEEE E + ++ Q A+ A AE
Sbjct: 11 EERSLFRPFTRESFAAIETRIAEEYAKQKELEKKR----------AEGEIRYED-----EDEDEGPQPDQTLEQGLPIPVRLQSSFPPELASTPLEDIDPFYSNQRTFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIRIFPTDGSWGNCTHE---NWFRFNSNESNWYEA--NGDYPLCGNSSGAGQCQEGYMCLQGFGDNPNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEQAIKDAQDAQLAKQQRAE 451 HSP 3 Score: 157.918 bits (398), Expect = 8.990e-35 Identity = 143/633 (22.59%), Postives = 281/633 (44.39%), Query Frame = 0
Query: 184 VFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDL------GSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYW----------ENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQ--VSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLF----GQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVA------------------GITCVPYFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+FT I+ +E IK A G Y +AW WLDF+++ +S + + L +F +RT R R L++++ + G++ +V+A++ ++ ++ +V+++ + +FA++G+Q++ G + CV N TT L+++ + PD C +FD+ G +YLC F++ T W L + +R + ++F+F I GSF+ +NL + ++ +++E +++A + E MTE + A+ + K K ++ Q V E++ FD + I+L I +N+ MT+DHY FT +L N N F IF+ E K+ A+ YF T+ WN+FD V+V+LS + L+ +I + L ++R ++ RV +L K K + +L + ++ AL N+ +L +++FIFA+ GM F +S ++ V +NF F S +++F++ + + D + + + L+ ++I+ L+++N+++A++L +++ + E D + +E
Sbjct: 1279 IFTVIFFFEMLIKWLALGFQ----KYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFK-CVD--------ANKTT---LSYE----------------------------IIPDYNACKAENYTWENSRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKA--------------GGSLEMFMTEDQKKYYNAMKKMG-------SKKPMKAIPRPRWRPQGIVFEIVTNKKFD----MIIMLFIGLNMLTMTMDHYQ--------QKQTFTQILDNLNMIFIVIFSTECLMKMFALRYHYF-TEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDRSGLDDV-----------YNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEECKQPDNEIGETGNCGNSTIGIAFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYE 1822 HSP 4 Score: 78.5666 bits (192), Expect = 1.249e-10 Identity = 50/175 (28.57%), Postives = 95/175 (54.29%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRY-YKCI 1063
R + ++ + F ++ ILV+ +M + T P + + I TG++ E+++K+ + GFI Y +AW WLDFV++A++ + G L GN+ +RT R LR L+ +A + G+K +V A+I ++ ++ +V+++ + +FA++G+ MG KCI
Sbjct: 131 RRVAIYILVHPLFSLFIITTILVNCILMIMP-----TTP----TVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL---GNL---AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCI 290 HSP 5 Score: 70.0922 bits (170), Expect = 4.544e-8 Identity = 69/311 (22.19%), Postives = 126/311 (40.51%), Query Frame = 0
Query: 502 VSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIF---IFAVMGMQLF----------------------------------------------GQSYVEKVCNPKWKCVL-----PRWNFTDFMH---SFMIVFRVLCGEWIESMWDCMF-VAGITCVPYFLATVLIANLVILNLFLALLLSSFTDM 750
+ V I+ P LFII I VN M + T + + FT I+ ES K+ A + P + D WN DFV++ L++V + ++ L+ LR+FR+LR K L TI+G I ++ NL V+ + +F +FA+MG+Q++ G S C + C+ P + +T F +F+ FR++ ++ E+++ + AG + +F+ + + + ++NL LA++ S+ ++
Sbjct: 130 IRRVAIYILVHPLFSLFIITTILVNCILMIMPT---------------TPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTM-GIDLGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIRIFPTDGSWGNCTHENWFRFNSNESNWYEANGDYPLCGNSSGAGQCQEGYMCLQGFGDNPNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDEL 421 HSP 6 Score: 69.707 bits (169), Expect = 6.153e-8 Identity = 77/365 (21.10%), Postives = 143/365 (39.18%), Query Frame = 0
Query: 433 SYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAA-----AAEAVAHLSLLDFSLLGGKDNKGF-------ETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAE-----NISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVE--------------------KVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGE-WIESMWDCMFVAGITCVP----------YFLATVLIANLVILNLFLALLLSSFTD 749
S +EL E+E + E + +EAA+ A+ +A+ F L G ++ F +FQ ++ + + E +I I + + L+ ++ P +L + FT IF E K A+ + +FT+ W DF+IV +S + +A I +R+ R LR + + + ++ + I ++ N+ V I IFA+MG+QLF Y + K N W+ R NF +++ +F+V + WI+ M D + + P YF+ ++ + LNLF+ +++ +F +
Sbjct: 1156 SKEELGYGTEDEDQCECDRKPTSNLIDEAAIEAADTEDIIEYSADCFPEGCYKKFPFLAGDEDSPFWQGWGNLRFKTFQ---------LIENKYFETAVITMILTSSLALALEDVHL------SQRPILQDILYYMDRIFTVIFFFEMLIKWLALGFQKYFTNAWCWLDFIIVGVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSYEIIPDYNACKAENYTWEN--SRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELLKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNE 1503
BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Match: gi|1060279234|ref|XP_017850717.1| (PREDICTED: sodium channel protein para isoform X44 [Drosophila busckii]) HSP 1 Score: 1247.65 bits (3227), Expect = 0.000e+0 Identity = 662/1200 (55.17%), Postives = 830/1200 (69.17%), Query Frame = 0
Query: 501 QVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVE-KVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGITCVPYFLATVLIANLVILNLFLALLLSSFTDMG-GNKAEDHEKDKIQIAFERIG----W-------CFR-------------------------------GGPFSKRNQEEKRKREALANSDDL----DDSESMPNKDGYSDNYSKQDSI----IGNGIDLGFSKGGLSDVYEEMGGSYDKTS------------------------ETIVYNPTDEVLVE---DCCPNFVYRVMPFCQGNPEEPFWQVWSRHRLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFIKYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRYYKCIDSNTGQRYSHEVIPNMTICREIGAPAEWVNSRVTFDNV----------ATWKGWIDVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSTLDSFMTEDQRKYIAAMKKASTKKPLKALPRPFWKPQAIIFGVITNKKFDMIVMGFIGLNMLTMMCDHYDQSVTWTFVLDNLNLFFIVVFTTEMLLKMFALRHHYFSEPWNLFDLVVVLLSLAGLFLSDIIEKYFVSPTLLRVVRVAKIGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFDDVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEDNCDAPDSELGSPGNCGSNMAAVIFMILYLVLTFLIIINMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPYKQLPEFLDVLEPPLQIRKPNKFKIIQMDIPIVRFINPDTGQSLEDCVFCADILDILTQDFFARKGNQIDDSPHIEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYHAS 1611
+ E +++IVFDPF ELFI LCI VN FM +DH++ M+ +L +GNYFFTA FA+E+ KL AMSP+Y+F +GWNIFDF+IV LS +EL E + GLS+LRSFRLLRVFKLAKSW +LN +++IMG T+GAL NLTFVLCIIIFIFAVMGMQLFG++Y + K P LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCM+V ++C+P+FLATV+I NLV+LNLFLALLLS+F D++ +KI AF RIG W CF+ G K +E+ + A+ + + D + P K Y +N + D+ G+ + F E M G + + + I++ +++L E DCCP+ Y+ P G+ + PFWQ W RL QLIENKYFE+ V+ +IL+SS + LED+ +P L D LYY+DRI T +FF+E IK ++GF YF NAWCWLDFVIV VSLINF ASL+GAG I FKTMRTLRALRPLRAM++++GM+VVVNAL+ A+PSIFNVL+VCLIFWLIFAI+GV G+Y+KC D+N G + SHE+IPN C WVNS + FD+V AT+KGWI +MNDAIDS E +QP RETNIYMY+YFV FI+ GSFFTLNL +GVIID FNEQK K G +L+ FMTEDQ+KY AMKK +KKPLKA+PRP W+PQAI+F ++T+KKFD+I+M FIGLNM TM D YD S T+ VLD LN F+V+F++E LLK+FALR+HYF EPWNLFD+VVV+LS+ GL LSDIIEKYFVSPTLLRVVRVAK+GRVLRL+KGA+GIRTLLF+L M+ PAL NI LLLFLVMFIF++FGMS F +VK +G +DV+NF+TF ++ LLFQ+ TSAGW AI NE+ CD PD++ G PGNCGS + F++ YLV++FLI+INMYIAVILENYSQA+EDVQEG+TD+DY+++YE+W++FDPEGTQY+ Y QL EFLDVLEPPLQI KPNK+KII MDIPI R D ++C DILD LT+DFFARKGN I+++ I + D GYE VSS++W+QRE YCA LIQ +++ H S
Sbjct: 777 KFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD--------MNKEMERVLKSGNYFFTATFAIEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHKDRFPDGD--LPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSEHGDNELELGHDEILADGLIKKGLKEQTQLEVAIGDGMEFTIHGDLKNNKPKKSKYLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEGPLDGDIIIHANDEDILDEYPADCCPDSYYKKFPILAGDEDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDTN-GTKLSHEIIPNRNACES--ENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICR----------GDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAAR--PDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKS 1951 HSP 2 Score: 502.671 bits (1293), Expect = 1.093e-144 Identity = 254/433 (58.66%), Postives = 319/433 (73.67%), Query Frame = 0
Query: 9 EAPPTFRPFTREELQIIESRIQQKKDNKKKRESKRQEN-IKLFGDGARARQHYEEDSDIEEEETEIIEPSTKLEQGSDLP-RRYGDFPLELANVPICDIDPYYRDKRTFMVVSKGGAIYRFSAGNALFFLSPFHPIRRIALLVLTHPLFSMFIIFTILLNCYVMIQKDTEYTASTEVVFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMSYVTILIDLGSFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKG-GPNPNYGYTSFDNFGSSYLCAFRLMTQDYWENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQ 438
E FRPFTRE L IE RI + + +K+ E KR E + +G + ++ +D E+E E +P LEQG +P R G FP ELA+ P+ DIDP+Y + TF+VVSKG I+RFSA A++ L PF+PIRR+A+ +L HPLFS+FII TIL+NC +MI T STEV+FT IYT+ESA+K+ ARG + FTYLRDAWNWLDF+VIA++YVT+ IDLG+ +ALRTFRV RALK+VA++PGLKTIV A++ SVKNLRDVI+LT+F L+VFAL+GLQIYMGVL+Q C+K F + + N+T D NWD N SNWY LCGN SGAG C D + CL+G GPNPNYGYTSFD+FG ++L AFRLMTQD+WE+LYQ+ LR AGPW+++FFI IFLGSFYL+NLILAIVAMSYDELQ
Sbjct: 11 EERSLFRPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVPQYGRKKKQKEIRYDD----EDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNILTFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLT---DENWDYHNRNSSNWYSEDEGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQ 436 HSP 3 Score: 149.443 bits (376), Expect = 3.678e-32 Identity = 142/631 (22.50%), Postives = 286/631 (45.32%), Query Frame = 0
Query: 184 VFTAIYTYESAIKLFARGLVWDRFTYLRDAWNWLDFLVIAMS---YVTILIDLG---SFSALRTFRVFRALKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFLLAVFALLGLQIYMGVLSQICVKDFHDNVLFQNMTTNGDLNWDRWVNNESNWYVSPINDKLVLCGNSSGAGVCPDGFTCLKGGPNPNYGYTSFDNFGSSYLCAFRLMTQDYW----------ENLYQITLRTAGPWNIIFFIFNIFLGSFYLINLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVAHLSLLDFSLLGGKDNKGFETDSFQSQVSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAAMSPRYFFTDGWNIFDFVIVVLSFVELLAENI--------SGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIFIFAVMGMQLFGQSYVEKVCNPKWKCVLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMFVAGI---TCVP-------------------YFLATVLIANLVILNLFLALLLSSFTDMGGNKAEDHEKDKIQIAFE 768
+FT I+ E IK A G Y +AW WLDF+++ +S +V L+ G +F +RT R R L++++ + G++ +V+A++ ++ ++ +V+++ + +FA++G+Q++ G F+ TNG + ++ +++ N+ + + +T + N FD+ G++YLC F++ T W + + +R + ++F+F I GSF+ +NL + ++ +++E +++A + E MTE + A+ + K K ++ Q ++ IV D ++ I+L I +N+ MTLD Y+ S + ++L N F IF+ E K+ A+ YF + WN+FD V+V+LS + L+ +I + L ++R ++ RV +L K K + +L + ++ AL N+ +L +++FIFA+ GM F + N +NF F S +++F++ + WD + A I C P + L+ ++I+ L+++N+++A++L +++ + E D + +E
Sbjct: 1289 IFTVIFFLEMLIKWLALGFK----VYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY-------------FKCEDTNG----------------TKLSHEIIPNRNACES----ENYTWVNSAMN-------FDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKA--------------GGSLEMFMTEDQKKYYNAMKKMG-------SKKPLKAIPRPRWRPQA--IVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYD--------ASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFI-EPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDV-------YNFKTFGQSMILLFQMST----SAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYE 1832 HSP 4 Score: 84.3445 bits (207), Expect = 2.127e-12 Identity = 74/317 (23.34%), Postives = 141/317 (44.48%), Query Frame = 0
Query: 894 RLIGSQLIENKYFESIVLVLILVSSFVMTLEDIWFETKPFLIDALYYLDRILTGVFFIETSIKLFSMGFI----KYFGNAWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIGALPSIFNVLVVCLIFWLIFAIIGVNFLMGRY-YKCI--------------------DSNTGQRYSHEVIPNMTICREIGAPAEWVNSRV--------------TFDNVATWKGWI----------DVMNDAIDSVERGQQPYRETNIYMYIYFVLFIVLGSFFTLNLLVGVIIDKFNE 1161
R + ++ + F ++ ILV+ +M + T P + + I TG++ E+++K+ + GFI Y +AW WLDFV++A++ + G L GN+ +RT R LR L+ +A + G+K +V A+I ++ ++ +V+++ + +FA++G+ MG KCI + N+ YS + + +C I + + V +FD+ GW D D V R P+ ++F++ I LGSF+ +NL++ ++ ++E
Sbjct: 143 RRVAIYILVHPLFSLFIITTILVNCILMIMP-----TTP----TVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL---GNL---AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSF----GWAFLSAFRLMTQDFWEDLYQLVLRAAGPWH------MLFFIVIIFLGSFYLVNLILAIVAMSYDE 434 HSP 5 Score: 68.1662 bits (165), Expect = 1.741e-7 Identity = 68/313 (21.73%), Postives = 126/313 (40.26%), Query Frame = 0
Query: 502 VSEVLAIIVFDPFTELFIILCIAVNVAFMTLDHYNIEYHDNGGMSPFFTSLLTNGNYFFTAIFALESFAKLAA----MSPRYFFTDGWNIFDFVIVVLSFVELLAENISGLSMLRSFRLLRVFKLAKSWKSLNDILTIMGNTIGALSNLTFVLCIIIF---IFAVMGMQLFGQSYVEKV------------------------------------------------CNPKWKCVL-----PRWNFTDFMH---SFMIVFRVLCGEWIESMWDCMF-VAGITCVPYFLATVLIANLVILNLFLALLLSSFTDM 750
+ V I+ P LFII I VN M + T + + FT I+ ES K+ A + P + D WN DFV++ L++V + ++ L+ LR+FR+LR K L TI+G I ++ NL V+ + +F +FA+MG+Q++ +K C+ + C+ P + +T F +F+ FR++ ++ E ++ + AG + +F+ + + + ++NL LA++ S+ ++
Sbjct: 142 IRRVAIYILVHPLFSLFIITTILVNCILMIMPT---------------TPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM-GIDLGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDEL 435 The following BLAST results are available for this feature:
BLAST of sodium voltage- type alpha isoform cra_c vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 16
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BLAST of sodium voltage- type alpha isoform cra_c vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of sodium voltage- type alpha isoform cra_c vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1122_size61463:35461..42662+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1122_size61463-processed-gene-0.3 ID=snap_masked-scaffold1122_size61463-processed-gene-0.3|Name=sodium voltage- type alpha isoform cra_c|organism=Tigriopus kingsejongensis|type=gene|length=7202bp|location=Sequence derived from alignment at scaffold1122_size61463:35461..42662+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'sodium voltage- type alpha isoform cra_c' has the following synonyms
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