nicotinic acetylcholine receptor a6 subunit isoform xix, snap_masked-scaffold131_size323982-processed-gene-0.7 (gene) Tigriopus kingsejongensis

Overview


Name	nicotinic acetylcholine receptor a6 subunit isoform xix
Unique Name	snap_masked-scaffold131_size323982-processed-gene-0.7
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. L. salmonis genes
Match: EMLSAG00000003136 (supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-1 gene:EMLSAG00000003136 transcript:EMLSAT00000003136 description:"maker-LSalAtl2s175-snap-gene-3.18")

HSP 1 Score: 104.76 bits (260), Expect = 2.838e-27
Identity = 46/62 (74.19%), Postives = 58/62 (93.55%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSETPLLGIYFSCIMVMVAASVM 62
            M+I GFY PPESGEKITLEIT+LM+LTF+MNMVT++ P SS+TPL+GIYFSCIM+M+A+SV+
Sbjct:  216 MAILGFYFPPESGEKITLEITILMSLTFFMNMVTDMQPPSSKTPLVGIYFSCIMIMIASSVI 277

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. L. salmonis genes
Match: EMLSAG00000007472 (supercontig:LSalAtl2s:LSalAtl2s429:150037:177030:-1 gene:EMLSAG00000007472 transcript:EMLSAT00000007472 description:"maker-LSalAtl2s429-augustus-gene-2.12")

HSP 1 Score: 73.1738 bits (178), Expect = 1.245e-15
Identity = 31/57 (54.39%), Postives = 49/57 (85.96%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVM 56
            M++ GF LPP+SGEK+TL++TVL++LT +MN+V+++ P +S+  PL+G YF+CIM+M
Sbjct:  141 MALLGFTLPPDSGEKLTLDVTVLLSLTVFMNIVSQIMPTTSDAVPLIGTYFNCIMMM 197

HSP 2 Score: 58.5362 bits (140), Expect = 1.340e-10
Identity = 30/86 (34.88%), Postives = 48/86 (55.81%), Query Frame = 0

Query:  118 ELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            EL+ IL E+++ITNR++                        D   ++ +DWK+AAMV+DR  L+ FT  T++ ++A L+SAP I+V
Sbjct:  362 ELQCILKELKFITNRMKI----------------------MDEEEEIMSDWKFAAMVIDRFCLITFTAFTVITTVAVLLSAPHIIV 425

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. L. salmonis genes
Match: EMLSAG00000000084 (supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1 gene:EMLSAG00000000084 transcript:EMLSAT00000000084 description:"augustus_masked-LSalAtl2s1011-processed-gene-0.0")

HSP 1 Score: 65.4698 bits (158), Expect = 5.028e-13
Identity = 61/203 (30.05%), Postives = 87/203 (42.86%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMVAASVMRKMEEANPPSQSLLNNVLNLDDNHCRHP-THKFPEYQGFRLRECCRDTAIIDPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKI 201
            +SI  FYLP +SGEK  L I +L++ T Y  +V E+ P +S+T PLLG Y    M+ +A +V            +L   +LNL   H R P TH+ P++         R T I           L  I  +   IQ+                             + DW   AMVLDRL L +F +  L+ SI  L+ +P +
Sbjct:  187 LSILVFYLPAQSGEKTALVIAILVSQTLYFTLVIEVIPATSKTLPLLGRYLIFSMIFIAIAV------------TLTTIILNL---HYRKPSTHRMPQW--------VRRTFI---------QRLPRILLMRVPIQE-----------------------------DQDWGIVAMVLDRLFLWVFGISALVGSIMILVESPNM 328

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. L. salmonis genes
Match: EMLSAG00000007737 (supercontig:LSalAtl2s:LSalAtl2s44:961763:992679:1 gene:EMLSAG00000007737 transcript:EMLSAT00000007737 description:"maker-LSalAtl2s44-augustus-gene-10.10")

HSP 1 Score: 62.3882 bits (150), Expect = 7.346e-12
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 0

Query:  115 VQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            +  EL  IL EI+ IT++I++                      +D A+ +ENDWK+AAMVLDRL L+ FT+ T++ ++A L SAP I+V
Sbjct:  398 IHRELSLILKEIRVITDKIRED---------------------EDTAA-IENDWKFAAMVLDRLCLITFTMFTIIATVAVLFSAPHIIV 464

HSP 2 Score: 53.9138 bits (128), Expect = 4.652e-9
Identity = 39/139 (28.06%), Postives = 60/139 (43.17%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSS-ETPLLGI-----------------------------------------YFSCIMVMVAASVMRKMEEANPPSQSLLNNVLNLDDNHCRHPTHKFPEY 97
            M++ GF LPP+SGEK++L +TVL++LT +   V+E  P +S + PLLG                                          YF+CIM MVA+SV              +  ++ L+ +H    TH+ P +
Sbjct:  142 MAVLGFTLPPDSGEKLSLGVTVLLSLTVFQQNVSEAMPVTSLQVPLLGFTILLSLTVFSQVVSESMPATSDALPLLVTFFLFHAYISKGTYFNCIMFMVASSV--------------VTTIMILNYHHRLADTHEMPNW 266

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. L. salmonis genes
Match: EMLSAG00000005313 (supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1 gene:EMLSAG00000005313 transcript:EMLSAT00000005313 description:"maker-LSalAtl2s283-snap-gene-6.12")

HSP 1 Score: 49.6766 bits (117), Expect = 1.270e-7
Identity = 30/95 (31.58%), Postives = 50/95 (52.63%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSS-ETPLLGIYFSCIMVMVA--------ASVMRKMEEANPPSQSLLNNVLNLDDNH 86
            +++  FYLP +SGEK+TL I++L +L  +  +V E+ P +S   PLLG Y    M++V+          VM +       S S+ +N  + +D  
Sbjct:  250 LTVLTFYLPSDSGEKVTLSISILTSLYVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSIRCDSRSLRKVMMRTCIGAETSTSIFDNAFSPNDKR 344

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. L. salmonis genes
Match: EMLSAG00000006143 (supercontig:LSalAtl2s:LSalAtl2s335:560568:612257:-1 gene:EMLSAG00000006143 transcript:EMLSAT00000006143 description:"maker-LSalAtl2s335-augustus-gene-5.8")

HSP 1 Score: 47.7506 bits (112), Expect = 3.281e-7
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0

Query:  158 QDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKI 201
            ++ A++V+ DWKY AMVLDRL L IFTL  L+ +   +  AP +
Sbjct:  110 KEEATKVKEDWKYVAMVLDRLFLWIFTLAVLVGTAGIIXQAPSL 153

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Match: gi|1703081|sp|P54247.1|ACHX_ONCVO (RecName: Full=Acetylcholine receptor non-alpha chain)

HSP 1 Score: 84.7297 bits (208), Expect = 4.195e-18
Identity = 65/231 (28.14%), Postives = 112/231 (48.48%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSS-ETPLLGIYFSCIMVMVAASVMRKMEEANPPSQSLLNNVLNLDDNHCRHPTHKFPEY-QGFRLRECCRDTAIIDPVQVELKSILDEI-------QYITNRIQKKVSPNSSSEWSESI---LKDTFHTP------------------QDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKI 201
            ++I  FYLPP SGEK+TL I +L+ALT +  ++ ++ P +S   PL G Y    M+MV+ SV              L  V++L+ +  R  TH+ P + +   LR   +   +  P  +++   +  +         I NR ++KV+ +S    ++ I   ++  + +P                  +DR + ++ DWK+ A VLDRL LL+F++   L +I  L  AP +
Sbjct:  212 LTIVAFYLPPRSGEKVTLCILILVALTVFYLLLKDIIPATSIALPLFGKYLLFTMIMVSLSV--------------LVTVISLNLHFRRPSTHRMPIWVKWLFLRILPKILFMRRPTLIKVDEAVRRVADYRRGYNMIINRYEQKVNCDSCRNVNKRITQEIQKIYRSPHVIKAFENVCFIAQLLKKKDREAMIDEDWKFVARVLDRLFLLLFSIACFLGTILILFQAPSL 428

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Match: gi|1351844|sp|P48180.1|ACH1_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type acr-16; Flags: Precursor)

HSP 1 Score: 77.0258 bits (188), Expect = 1.951e-15
Identity = 33/63 (52.38%), Postives = 54/63 (85.71%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMVAASVM 62
            M++ GF LPP++GEKITL+ITVL+++ F++++V+E++P +SE  PLLGI+F+C M++V AS +
Sbjct:  246 MTLLGFTLPPDAGEKITLQITVLLSICFFLSIVSEMSPPTSEAVPLLGIFFTCCMIVVTASTV 308

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Match: gi|224487629|sp|A8WQK3.2|ACH1_CAEBR (RecName: Full=Acetylcholine receptor subunit alpha-type acr-16; Flags: Precursor)

HSP 1 Score: 77.0258 bits (188), Expect = 2.010e-15
Identity = 33/63 (52.38%), Postives = 54/63 (85.71%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMVAASVM 62
            M++ GF LPP++GEKITL+ITVL+++ F++++V+E++P +SE  PLLGI+F+C M++V AS +
Sbjct:  246 MTLLGFTLPPDAGEKITLQITVLLSICFFLSIVSEMSPPTSEAVPLLGIFFTCCMIVVTASTV 308

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Match: gi|113108|sp|P12391.1|ACHB3_RAT (RecName: Full=Neuronal acetylcholine receptor subunit beta-3; Flags: Precursor)

HSP 1 Score: 72.0182 bits (175), Expect = 1.179e-13
Identity = 61/218 (27.98%), Postives = 107/218 (49.08%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMVAASVMRKMEEANPPSQSLLNNVLNLDDNHCRHPTHKFPEYQGFRLRECCRDTAIIDPV-QVELKSILDEIQYITNRI--QKKVSPNSSSE---------WSESILKDTFHTPQDR-ASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVVY 204
            +++  FYLP + GEK++L  +VL++LT ++ ++ E+ P SS+  PL+G Y   IM+ V  S++  +   N   +S          +   HP    P  +   L+   R   + DP+ +       +    +  ++  ++K +P S  E          SESI   + H  ++   SQV  DWK+ A VLDR+ L +F + ++L SI   I A K+ ++
Sbjct:  256 LTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFVTLSIIVTVFVINVHHRS----------SSTYHPMA--PWVKRLFLQRLPRWLCMKDPMDRFSFPDGKESDTAVRGKVSGKRKQTPASDGERVLVAFLEKASESIRYISRHVKKEHFISQVVQDWKFVAQVLDRIFLWLFLIASVLGSILIFIPALKMWIH 461

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Match: gi|66774014|sp|Q8BMN3.1|ACHB3_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit beta-3; Flags: Precursor)

HSP 1 Score: 69.707 bits (169), Expect = 5.911e-13
Identity = 61/218 (27.98%), Postives = 104/218 (47.71%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMVAASVMRKMEEANPPSQSLLNNVLNLDDNHCRHPTHKFPEYQGFRLRECCRDTAIIDPV-QVELKSILDEIQYITNRI--QKKVSPNSSSE---------WSESILKDTFHTPQDR-ASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVVY 204
            +++  FYLP + GEK++L  +VL++LT ++ ++ E+ P SS+  PL+G Y   IM+ V  S++  +   N   +S          +   HP    P  +   L +  R   + DP  +       +    +  +   +KK +P S  E          SESI   + H  ++   SQV  DWK+ A VLDR+ L +F   ++L S+   I A K+ ++
Sbjct:  256 LTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFVTLSIIVTVFVINVHHRS----------SSTYHPMA--PWVKRLFLEKLPRWLCMKDPRDRFSFPDGTESKGTVRGKFPGKKKQTPTSDGERVLVAFLEKASESIRYISRHVKKEHFISQVVQDWKFVAQVLDRIFLWLFLTASVLGSVLIFIPALKMWIH 461

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Match: gi|68052380|sp|Q9I8C7.1|ACH10_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-10; AltName: Full=Alpha 10 nAChR; AltName: Full=Nicotinic acetylcholine receptor subunit alpha-10; Short=NACHR alpha-10; Flags: Precursor)

HSP 1 Score: 67.3958 bits (163), Expect = 3.563e-12
Identity = 54/218 (24.77%), Postives = 88/218 (40.37%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSETPLLGIYFSCIMVMVAASV-----MRKMEEANPPSQSLLNNVLNLDDNH-------------CRHPTH--------KFPEYQGFRLRECCRDTAIIDPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSI 192
            ++  GFYLP +SGEK++L +TVL+ALT +  +V E  P S   PL+G Y+   M M+ AS      +  +    P ++ +      L  +H             C  P          + P  +G     C R   +         ++L  + YI    ++                    T Q RA++    WK  A V+DR  + +F L+  L+S+
Sbjct:  255 LAPLGFYLPADSGEKVSLGVTVLLALTVFQLLVAESMPPSESVPLIGKYYIATMTMITASTALTIFIMNIHHCGPGARPVPPWARRLILHHLARALCVCEVGESCGRPQREGTGGMGPRDPPGEGVEPGLCPRSRCL-----CHHHAVLSSVGYIAGVFRRH------------------RTAQRRAAE----WKKVAKVMDRFFMWVFFLMVFLMSV 445

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Match: gi|231487|sp|P09481.2|ACHA3_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor)

HSP 1 Score: 66.2402 bits (160), Expect = 1.064e-11
Identity = 61/235 (25.96%), Postives = 108/235 (45.96%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMVAASVMRKMEEAN-----PPSQSLLNNV----LNL------------DDNHCRHP----THKFPEYQGFRLRE--CCRDTAIIDPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTP------------------QDRASQVENDWKYAAMVLDRLSLLIFTLLTLL 189
            +++  FYLP + GEK+TL I+VL++LT ++ ++TE  P +S   PL+G Y    M+ V  S++  +   N     P + ++   V    LNL            D+ + + P    T +F     F   E  CC+D  +   +     S     +   +     ++ +SSSE  + +   +  +P                  Q+ A ++++DWKY AMV+DR+ L +F L+ +L
Sbjct:  249 LTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRPTSDEENNQKPKPFYTSEFSNLNCFNSSEIKCCKDGFVCQDMAC---SCCQYQRMKFSDFSGNLTRSSSSESVDPLFSFSVLSPEMRDAIESVKYIAENMKMQNEAKEIQDDWKYVAMVIDRIFLWVFILVCIL 480

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Match: gi|113077|sp|P02711.1|ACHA_TORMA (RecName: Full=Acetylcholine receptor subunit alpha; Flags: Precursor)

HSP 1 Score: 65.855 bits (159), Expect = 1.323e-11
Identity = 59/216 (27.31%), Postives = 102/216 (47.22%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQ-SSETPLLGIYFSCIMVMVAASVMRKMEEANPPSQSLLNNVLNLDDNHCRHP-THKFPEY--QGF--------------RLRECCRDTAI----IDPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDR-ASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIA 193
            +++  FYLP +SGEK+TL I+VL++LT ++ ++ EL P  SS  PL+G Y    M+ V +S++  +   N                H R P TH  P++  + F              R  +  ++  I    ID   +  K +  E+ + T  I+   +P+  S   E +     H   D  +S    +WKY AMV+D + L +F L+ ++ +++
Sbjct:  252 LTVLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMIFVISSIIVTVVVIN---------------THHRSPSTHTMPQWVRKIFINTIPNVMFFSTMKRASKEKQENKIFADDIDISDISGKQVTGEVIFQTPLIK---NPDVKSA-IEGVKYIAEHMKSDEESSNAAEEWKYVAMVIDHILLCVFMLICIIGTVS 448

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Match: gi|113076|sp|P02710.1|ACHA_TORCA (RecName: Full=Acetylcholine receptor subunit alpha; Flags: Precursor)

HSP 1 Score: 65.855 bits (159), Expect = 1.427e-11
Identity = 59/215 (27.44%), Postives = 97/215 (45.12%), Query Frame = 0

Query:    6 FYLPPESGEKITLEITVLMALTFYMNMVTELTPQ-SSETPLLGIYFSCIMVMVAASVMRKMEEANPPSQSLLNNVLNLDDNHCRHP-THKFPEYQGFRLRECCRDTA------------------------IIDPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDR-ASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIA 193
            FYLP +SGEK+TL I+VL++LT ++ ++ EL P  SS  PL+G Y    M+ V +S++  +   N                H R P TH  P++    +R+   DT                          ID   +  K +  E+ + T  I+   +P+  S   E +     H   D  +S    +WKY AMV+D + L +F L+ ++ +++
Sbjct:  257 FYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMIFVISSIIITVVVIN---------------THHRSPSTHTMPQW----VRKIFIDTIPNVMFFSTMKRASKEKQENKIFADDIDISDISGKQVTGEVIFQTPLIK---NPDVKSA-IEGVKYIAEHMKSDEESSNAAEEWKYVAMVIDHILLCVFMLICIIGTVS 448

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Match: gi|68052384|sp|Q9PTS8.1|ACHA9_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-9; AltName: Full=Nicotinic acetylcholine receptor subunit alpha-9; Short=NACHR alpha-9; Flags: Precursor)

HSP 1 Score: 65.4698 bits (158), Expect = 1.794e-11
Identity = 59/235 (25.11%), Postives = 96/235 (40.85%), Query Frame = 0

Query:    5 GFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSETPLLGIYFSCIMVMVAAS---------VMRKMEEANPPSQ----------SLLNNVLNLDDNHCRHPTHKFPEYQGFRLRECCRDTAIIDPVQVELKSILDEIQYITNR-IQKKVSPNSSSEWSES--------------------ILKDTFHTPQ-------DRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSI 192
            GFYLP +SGEK++L +TVL+ALT +  MV E+ P S   PL+G Y+   M M+ AS         V     EA P  Q          S +  V ++ +N C  P  +  +       + CR                D   ++++R     +  N +  W++S                    ++K+  +          +RA  +E  WK  A V+DR  + IF ++   +S+
Sbjct:  260 GFYLPADSGEKVSLGVTVLLALTVFQLMVAEIMPPSENVPLIGKYYIATMTMITASTALTIIIMNVHHCGSEAKPVPQWARVVILDYMSKIFFVYDVGEN-CTSPRREKEQEHRLEGGDMCRGG--------------DGKSHLSSRNDDSDLKENLNGNWNKSFGVHGENVRENVNCCSCYKMLIKNIEYIANCVRDHKANRAKGIE--WKKVAKVMDRFFMWIFFIMVFFMSV 477

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Match: gi|939671625|ref|XP_014282439.1| (PREDICTED: neuronal acetylcholine receptor subunit alpha-7-like isoform X2 [Halyomorpha halys])

HSP 1 Score: 131.339 bits (329), Expect = 2.715e-32
Identity = 89/271 (32.84%), Postives = 130/271 (47.97%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSETPLLGIYFSCIMVMVAASV------------------------------------MRK------------------MEEANPPSQSLLNNVLNLDDNHCRHPTHKFPEYQGFRLRECCRDTAIIDPVQV--------------ELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            M++ GF LPP+SGEK++L++TVL++LTF++NMV E  P +SE PL+G YF+CIM MVA+SV                                    MR+                  +E     S+SLL NVL++DD+  RH   +   +   R  E    T  +    +              EL  IL E++ IT++++K                       D A+++ NDWK+AAMV+DRL L+IFTL T++ +IA L SAP I+V
Sbjct:  264 MAVLGFTLPPDSGEKLSLDVTVLLSLTFFLNMVAETMPPTSERPLIGTYFNCIMFMVASSVVSTILILNYHHRNADTHEMSPWIKSLFLHWLPCVLRMRRPGHGDNRDSSGKSMQLHTLELKERSSKSLLANVLDIDDDF-RHGPLQASSHTFIRAHEEGTSTGSVTGSVIHSQGMVSSCLGPHRELGQILKELRMITDKLRK----------------------DDEAAEITNDWKFAAMVVDRLCLIIFTLFTVIATIAVLFSAPHIIV 511

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Match: gi|1227964378|ref|XP_021913492.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X4 [Zootermopsis nevadensis])

HSP 1 Score: 130.568 bits (327), Expect = 5.797e-32
Identity = 92/278 (33.09%), Postives = 132/278 (47.48%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSETPLLGIYFSCIMVMVAASVM----------------------------------------------------RKMEEANPPSQSLLNNVLNLDDNHCRHP----THKFPEYQGFRLREC-------------------CRDTAIIDPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            M++ GF LPP+SGEK++L++TVL++LTF++NMV E  P +SE PL+G YF+CIM MVA+SV+                                                    R+ME     S+SLL NVL++DD+   HP    T       G+ LR                        +  + P   EL  IL E++ IT++++K                      +D A++V NDWK+AAMV+DRL L+IFTL T++ +IA L SAP I+V
Sbjct:  269 MAVLGFTLPPDSGEKLSLDVTVLLSLTFFLNMVAETMPPTSERPLIGTYFNCIMFMVASSVVSTILILNYHHRNADTHEMSPWIKAIFLHWLPCILRMSRPGAESDSSRKTAQKREMELKERSSKSLLANVLDIDDDFRHHPGALQTSSAVSATGY-LRGSHAHHDDGGGGGGTLLHGGSGNSSTCLGP-HRELTLILKELRVITDKLRK----------------------EDEAAEVTNDWKFAAMVVDRLCLIIFTLFTVIATIAVLFSAPHIIV 522

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Match: gi|1325263610|ref|XP_023333973.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X3 [Eurytemora affinis])

HSP 1 Score: 128.257 bits (321), Expect = 3.502e-31
Identity = 87/270 (32.22%), Postives = 129/270 (47.78%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSETPLLGIYFSCIMVMVAASVM---------------------------------------------------RKMEEANPP---SQSLLNNVLNLDDNH--------CRHPTHKFPEYQGFRLRECCRDTAIID-----PVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            M++ GF LPP+SGEK++L +T+L++LT ++NMV+E  P +S+ PLLG YF+CIM MVA+SV+                                                    KM E +     S+SLL NVL++DD+            PTH    ++         +T   +      +Q EL  IL EI+ IT++I++                       D +S +ENDWK+AAMVLDRL L+ FT+ TL+ +IA L +AP ++V
Sbjct:  248 MAVLGFTLPPDSGEKLSLGVTILLSLTVFLNMVSETMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLSHTHEMPEWVRMLFLQWIPWMLRMSRPGEKITLKSILMQNKMRELDTKENSSKSLLANVLDMDDDFRPGGSTHSTFFPTHNNMVHKNGGFIRVTHNTQPFEDTFPTGIQKELNLILKEIRIITDKIKE----------------------HDESSAIENDWKFAAMVLDRLCLITFTMFTLIATIAVLAAAPHVIV 495

[Close]

BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Match: gi|939671631|ref|XP_014282442.1| (PREDICTED: neuronal acetylcholine receptor subunit alpha-7-like isoform X5 [Halyomorpha halys])

HSP 1 Score: 126.716 bits (317), Expect = 1.119e-30
Identity = 87/258 (33.72%), Postives = 126/258 (48.84%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMVAASV------------------------------------MRK------------------MEEANPPSQSLLNNVLNLDDNHCRHPTHKFPEYQGFRLRECCRDTAIIDPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            M++ GF LPP+SGEK++L +T+L++LT ++NMV E  P +S+  PLLG YF+CIM MVA+SV                                    MR+                  +E     S+SLL NVL++DD+  RH   +   +   R  E    T        EL  IL E++ IT++++K                       D A+++ NDWK+AAMV+DRL L+IFTL T++ +IA L SAP I+V
Sbjct:  264 MAVLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNADTHEMSPWIKSLFLHWLPCVLRMRRPGHGDNRDSSGKSMQLHTLELKERSSKSLLANVLDIDDDF-RHGPLQASSHTFIRAHEEGTSTG----PHRELGQILKELRMITDKLRK----------------------DDEAAEITNDWKFAAMVVDRLCLIIFTLFTVIATIAVLFSAPHIIV 494

[Close]

BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Match: gi|1321301488|ref|XP_023292662.1| (neuronal acetylcholine receptor subunit alpha-7 [Lucilia cuprina])

HSP 1 Score: 125.561 bits (314), Expect = 1.990e-30
Identity = 73/212 (34.43%), Postives = 116/212 (54.72%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMVAASVMRKM-----EEANPPSQSLLNNVL----NLDDNHCRHPTHKFPEYQGFRLRECCRDTAIIDPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIV 202
            M++ GF LPP+SGEK++L +T+L++LT ++NMV E  P +S+  PLLG YF+CIM MVA+SV+  +        NP +  +   V+       D+    P     +    R+ E    T +    + EL  IL E+++IT++++K                      +D   +V  DWK+AAMV+DRL L++FTL T++ ++A L SAP  +
Sbjct:  271 MALLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNPDTHEMSEWVIIFLKKQGDDGSVGPVGPVGDT---RMHEAISHTCLSSSAEYELALILKELRWITDQLKK----------------------EDEVGEVTRDWKFAAMVVDRLCLIVFTLFTIIATLAVLFSAPHFI 457

[Close]

BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Match: gi|939671634|ref|XP_014282443.1| (PREDICTED: neuronal acetylcholine receptor subunit alpha-7-like isoform X6 [Halyomorpha halys])

HSP 1 Score: 125.176 bits (313), Expect = 4.702e-30
Identity = 86/258 (33.33%), Postives = 126/258 (48.84%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMVAASV------------------------------------MRK------------------MEEANPPSQSLLNNVLNLDDNHCRHPTHKFPEYQGFRLRECCRDTAIIDPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            M++ GF LPP+SGEK++L +T+L++LT ++NMV E  P +S+  PLLG YF+CIM MVA+SV                                    MR+                  +E     S+SLL NVL++DD+  RH   +   +   R  E        +    EL  IL E++ IT++++K                       D A+++ NDWK+AAMV+DRL L+IFTL T++ +IA L SAP I+V
Sbjct:  264 MAVLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNADTHEMSPWIKSLFLHWLPCVLRMRRPGHGDNRDSSGKSMQLHTLELKERSSKSLLANVLDIDDDF-RHGPLQASSHTFIRAHE--------EGPHRELGQILKELRMITDKLRK----------------------DDEAAEITNDWKFAAMVVDRLCLIIFTLFTVIATIAVLFSAPHIIV 490

[Close]

BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Match: gi|1325263615|ref|XP_023333980.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X4 [Eurytemora affinis])

HSP 1 Score: 125.176 bits (313), Expect = 5.302e-30
Identity = 85/270 (31.48%), Postives = 129/270 (47.78%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSETPLLGIYFSCIMVMVAASVM---------------------------------------------------RKMEEANPP---SQSLLNNVLNLDDNH--------CRHPTHKFPEYQGFRLRECCRDTAIID-----PVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            M++ GF LPP+SGEK++L +TVL++LT ++N V+ + P +S++PL+G YF+CIM MVA+SV+                                                    KM E +     S+SLL NVL++DD+            PTH    ++         +T   +      +Q EL  IL EI+ IT++I++                       D +S +ENDWK+AAMVLDRL L+ FT+ TL+ +IA L +AP ++V
Sbjct:  248 MAVLGFTLPPDSGEKLSLGVTVLLSLTIFLNTVSSIIPITSDSPLIGTYFNCIMFMVASSVVTTIMILNYHHRLSHTHEMPEWVRMLFLQWIPWMLRMSRPGEKITLKSILMQNKMRELDTKENSSKSLLANVLDMDDDFRPGGSTHSTFFPTHNNMVHKNGGFIRVTHNTQPFEDTFPTGIQKELNLILKEIRIITDKIKE----------------------HDESSAIENDWKFAAMVLDRLCLITFTMFTLIATIAVLAAAPHVIV 495

[Close]

BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Match: gi|1339042704|ref|XP_023709393.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X2 [Cryptotermes secundus])

HSP 1 Score: 124.405 bits (311), Expect = 1.011e-29
Identity = 89/269 (33.09%), Postives = 129/269 (47.96%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMV--------------------------------------------AASVMRK----------MEEANPPSQSLLNNVLNLDDN--HCRHPTHKFPEYQGFRLRECCRDTAII---------DPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            M++ GF LPP+SGEK+TL +T+L++LT ++N+V E  PQ S+  PLLG YF+CIM MV                                               + RK          ME     S+SLL NVL++DD+  HC   T+      GF LR   R TA I            Q E+++IL E+Q+IT R++K                       D  +++ +DWK+AAMV+DR  L+IFT+ T++ ++A L+SAP I+V
Sbjct:  278 MALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPQWIKSVFLQWLPWILGMSRPGKKITRKTILMSNRMKEMELKERSSKSLLANVLDIDDDFRHCTG-TNSTSASSGF-LRSGSRGTAAILDDTGGTSCSVAQREMQAILRELQFITGRMRKA----------------------DDEAELISDWKFAAMVVDRFCLIIFTMFTIIATVAVLLSAPHIIV 522

[Close]

BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Match: gi|939671627|ref|XP_014282440.1| (PREDICTED: neuronal acetylcholine receptor subunit alpha-7-like isoform X3 [Halyomorpha halys])

HSP 1 Score: 123.635 bits (309), Expect = 1.803e-29
Identity = 86/268 (32.09%), Postives = 128/268 (47.76%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMVAASV------------------------------------MRK------------------MEEANPPSQSLLNNVLNLDDNHCRHP----------THKFPEYQGFRLRECCRDTAIIDPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            M++ GF LPP+SGEK++L +T+L++LT ++NMV E  P +S+  PLLG YF+CIM MVA+SV                                    MR+                  +E     S+SLL NVL++DD+    P           H+     G  +      ++ + P   EL  IL E++ IT++++K                       D A+++ NDWK+AAMV+DRL L+IFTL T++ +IA L SAP I+V
Sbjct:  264 MAVLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNADTHEMSPWIKSLFLHWLPCVLRMRRPGHGDNRDSSGKSMQLHTLELKERSSKSLLANVLDIDDDFRHGPLQASSHTFIRAHEEGSVTGSVIHSQGMVSSCLGP-HRELGQILKELRMITDKLRK----------------------DDEAAEITNDWKFAAMVVDRLCLIIFTLFTVIATIAVLFSAPHIIV 508

[Close]

BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Match: gi|408692419|gb|AFU82558.1| (nicotinic acetylcholine receptor alpha6 subunit isoform I [Periplaneta americana])

HSP 1 Score: 123.25 bits (308), Expect = 2.325e-29
Identity = 87/269 (32.34%), Postives = 126/269 (46.84%), Query Frame = 0

Query:    1 MSIFGFYLPPESGEKITLEITVLMALTFYMNMVTELTPQSSET-PLLGIYFSCIMVMV--------------------------------------------AASVMRK----------MEEANPPSQSLLNNVLNLDDN--HCRHPTHKFPEYQGFRLRECCRDTAII---------DPVQVELKSILDEIQYITNRIQKKVSPNSSSEWSESILKDTFHTPQDRASQVENDWKYAAMVLDRLSLLIFTLLTLLLSIACLISAPKIVV 203
            M++ GF LPP+SGEK+TL +T+L++LT ++N+V E  PQ S+  PLLG YF+CIM MV                                               + RK          +E     S+SLL NVL++DD+  HC           GF LR   R TA              Q EL++IL E+Q+IT R++K                       D  +++ +DWK+AAMV+DR  L+IFT+ T++ ++A L+SAP I+V
Sbjct:  254 MALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPQWIKSVFLQWLPWILGMSRPGKKITRKTILMSNRMKELELKERSSKSLLANVLDIDDDFRHCSGTNSTSATSAGF-LRSGGRGTAATLDDTGSTPCSVAQRELQAILRELQFITGRMRKA----------------------DDEAELISDWKFAAMVVDRFCLIIFTMFTIIATVAVLLSAPHIIV 499

The following BLAST results are available for this feature:

BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. L. salmonis genes
BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr

BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 6


Match Name	E-value	Identity	Description
EMLSAG00000003136	2.838e-27	74.19	supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-...	[more]
EMLSAG00000007472	1.245e-15	54.39	supercontig:LSalAtl2s:LSalAtl2s429:150037:177030:-...	[more]
EMLSAG00000000084	5.028e-13	30.05	supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1...	[more]
EMLSAG00000007737	7.346e-12	39.33	supercontig:LSalAtl2s:LSalAtl2s44:961763:992679:1 ...	[more]
EMLSAG00000005313	1.270e-7	31.58	supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1...	[more]
EMLSAG00000006143	3.281e-7	47.73	supercontig:LSalAtl2s:LSalAtl2s335:560568:612257:-...	[more]

BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1703081\|sp\|P54247.1\|ACHX_ONCVO	4.195e-18	28.14	RecName: Full=Acetylcholine receptor non-alpha cha...	[more]
gi\|1351844\|sp\|P48180.1\|ACH1_CAEEL	1.951e-15	52.38	RecName: Full=Acetylcholine receptor subunit alpha...	[more]
gi\|224487629\|sp\|A8WQK3.2\|ACH1_CAEBR	2.010e-15	52.38	RecName: Full=Acetylcholine receptor subunit alpha...	[more]
gi\|113108\|sp\|P12391.1\|ACHB3_RAT	1.179e-13	27.98	RecName: Full=Neuronal acetylcholine receptor subu...	[more]
gi\|66774014\|sp\|Q8BMN3.1\|ACHB3_MOUSE	5.911e-13	27.98	RecName: Full=Neuronal acetylcholine receptor subu...	[more]
gi\|68052380\|sp\|Q9I8C7.1\|ACH10_CHICK	3.563e-12	24.77	RecName: Full=Neuronal acetylcholine receptor subu...	[more]
gi\|231487\|sp\|P09481.2\|ACHA3_CHICK	1.064e-11	25.96	RecName: Full=Neuronal acetylcholine receptor subu...	[more]
gi\|113077\|sp\|P02711.1\|ACHA_TORMA	1.323e-11	27.31	RecName: Full=Acetylcholine receptor subunit alpha...	[more]
gi\|113076\|sp\|P02710.1\|ACHA_TORCA	1.427e-11	27.44	RecName: Full=Acetylcholine receptor subunit alpha...	[more]
gi\|68052384\|sp\|Q9PTS8.1\|ACHA9_CHICK	1.794e-11	25.11	RecName: Full=Neuronal acetylcholine receptor subu...	[more]

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BLAST of nicotinic acetylcholine receptor a6 subunit isoform xix vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|939671625\|ref\|XP_014282439.1\|	2.715e-32	32.84	PREDICTED: neuronal acetylcholine receptor subunit...	[more]
gi\|1227964378\|ref\|XP_021913492.1\|	5.797e-32	33.09	neuronal acetylcholine receptor subunit alpha-7-li...	[more]
gi\|1325263610\|ref\|XP_023333973.1\|	3.502e-31	32.22	neuronal acetylcholine receptor subunit alpha-7-li...	[more]
gi\|939671631\|ref\|XP_014282442.1\|	1.119e-30	33.72	PREDICTED: neuronal acetylcholine receptor subunit...	[more]
gi\|1321301488\|ref\|XP_023292662.1\|	1.990e-30	34.43	neuronal acetylcholine receptor subunit alpha-7 [L...	[more]
gi\|939671634\|ref\|XP_014282443.1\|	4.702e-30	33.33	PREDICTED: neuronal acetylcholine receptor subunit...	[more]
gi\|1325263615\|ref\|XP_023333980.1\|	5.302e-30	31.48	neuronal acetylcholine receptor subunit alpha-7-li...	[more]
gi\|1339042704\|ref\|XP_023709393.1\|	1.011e-29	33.09	neuronal acetylcholine receptor subunit alpha-7-li...	[more]
gi\|939671627\|ref\|XP_014282440.1\|	1.803e-29	32.09	PREDICTED: neuronal acetylcholine receptor subunit...	[more]
gi\|408692419\|gb\|AFU82558.1\|	2.325e-29	32.34	nicotinic acetylcholine receptor alpha6 subunit is...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold131_size323982	supercontig	scaffold131_size323982:66362..67496 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:ion channel activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold131_size323982-processed-gene-0.7-mRNA-1	snap_masked-scaffold131_size323982-processed-gene-0.7-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold131_size323982:66362..67496+

gene from alignment at scaffold131_size323982:66362..67496+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold131_size323982-processed-gene-0.7 ID=snap_masked-scaffold131_size323982-processed-gene-0.7|Name=nicotinic acetylcholine receptor a6 subunit isoform xix|organism=Tigriopus kingsejongensis|type=gene|length=1135bp|location=Sequence derived from alignment at scaffold131_size323982:66362..67496+ (Tigriopus kingsejongensis)
ATGTCCATCTTCGGATTCTATCTCCCACCCGAGTCCGGAGAGAAGATCAC
ACTGGAAATTACGGTCTTGATGGCCTTGACCTTCTACATGAACATGGTCA
CAGAGTTAACTCCGCAGTCGTCGGAAACGCCTTTACTAGGGATCTACTTT
TCCTGCATCATGGTCATGGTGGCCGCTTCTGTGGTCAGTATTTTTTTTTC
AAGGCCAAAGTATGATTTTACAATTGATCCATCTAGCCCAAATAATTAAA
AGAGGTGAAGGGCATTACGGCAAGGTGACTGATTTTTCGATGAGACAACT
TAGTTTCGGGAAATTGTCACAATGTGACCACAAAGTAGCCTTTTCTGTAT
TTAACAGCATTTTGTTCAAACTGATTTCCTCCTAAGCCTTGTCTGCGAAG
TAAAGTCAACAGTTTACCCTAAAAAGAGTTAAAAAGTCTGGAAGCTTTCT
TTTTGTAGGTGGATGCCGTTCTTGTGCTGAATTTTCATCGCGAGTTTGGG
AGCAAAGGTCAGCAGATGCCGTATTTTGTGCGATTCTTATTTCTCCAATT
GCTGCCGTGGATCTTGCGTATGAAGCGCCCGGGCCATAAAATCACTCGAT
CGTCCTTGCTTACTCAACTCAAGGCAAGAGATCATCTGTTTCAATCCAGT
CCTCCGGCACAAAAAGATTAGCGCTAATGAAGGATTTCACTTTCGCAATC
CAGATGAGAAAGATGGAAGAGGCCAATCCACCCTCCCAGTCTTTGCTCAA
CAACGTTTTGAATCTTGATGATAATCATTGTCGTCACCCTACACACAAGT
TCCCCGAGTACCAGGGATTTCGATTGCGGGAGTGTTGCCGAGACACGGCC
ATTATTGACCCAGTCCAAGTGGAACTCAAGTCCATTCTGGACGAAATCCA
ATACATCACGAACCGAATCCAAAAAAAGGTGAGTCCAAACTCATCATCGG
AGTGGTCGGAGTCCATTTTAAAGGATACATTCCACACACCGCAGGACCGA
GCCTCGCAGGTGGAGAATGATTGGAAGTACGCGGCCATGGTTTTGGATCG
ACTCAGTTTGCTGATCTTCACGTTGCTGACGTTGCTTTTGTCGATTGCGT
GTTTGATAAGTGCTCCCAAGATCGTGGTGTATTGA

Synonyms

The feature 'nicotinic acetylcholine receptor a6 subunit isoform xix' has the following synonyms


Synonym
Tk05541

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