dna repair protein xrcc1, snap_masked-scaffold1412_size42778-processed-gene-0.4 (gene) Tigriopus kingsejongensis

Overview


Name	dna repair protein xrcc1
Unique Name	snap_masked-scaffold1412_size42778-processed-gene-0.4
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of dna repair protein xrcc1 vs. L. salmonis genes
Match: EMLSAG00000002736 (supercontig:LSalAtl2s:LSalAtl2s1588:75489:77910:1 gene:EMLSAG00000002736 transcript:EMLSAT00000002736 description:"maker-LSalAtl2s1588-snap-gene-0.5")

HSP 1 Score: 230.72 bits (587), Expect = 6.685e-69
Identity = 146/377 (38.73%), Postives = 205/377 (54.38%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDSKASNGGEKVATKLGAFTLKPEDDSNLNVSVGSWFSKKQ-----DPKRTSLVGDMKSNQTLASLALASSQVEKAGIKGGVASQPPKAAFYQLQDRPSPKAAGRPPPQKLPRRDVMPGESPP-----------RPARKPRVSQSTPSSTATKSSRPPKNTPKASPKAMRPFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPK 361
            M  ++   +VSFSSED    A  LL N   KKW  ++PGE   WVI +LE  + I  IDIGN  SAFVEVQV R+     S  FR LL +SSF++P+ESR+ E+  RVRMF  +  +    K+ WD ++V+CTQPFNK+ +YG++F+T+    DSKA+        ++G+  LK E+  +  +  G  F+K++       ++ SL  DMKS ++LAS +LA SQ +    K     +  +    + ++R   +        KLP R      +P            +  RK   S S  SST  + S   K           PF++L  GV+F ISG+QNPLR E+R KAL MGA Y  DW++ C+HLICAF NT K
Sbjct:    1 MAPLKFRRLVSFSSEDRDKPACGLLSN---KKWCCKDPGESSAWVIFELEGLAKISAIDIGNFCSAFVEVQVSRS----GSSDFRPLLPSSSFLNPVESRSMEHFERVRMFSEDKFDISNSKDSWDLLKVICTQPFNKRTRYGLNFVTVNGMLDSKANLISSPKIHRIGSIILKDEEPYDETLKNGDLFAKRKIKIIDSSRKLSLSEDMKSKESLASXSLAISQRKD---KENETLRSKRMVDEENEERRKARKRKLDTIDKLPSRKNEENSTPSTLNEHSEKHTLKKLRKKDPSTSCLSSTIKEESTNVKTA---------PFRKLFSGVVFVISGFQNPLRSEIRSKALAMGAVYSGDWNTTCTHLICAFTNTIK 358

HSP 2 Score: 82.8037 bits (203), Expect = 6.277e-17
Identity = 45/138 (32.61%), Postives = 74/138 (53.62%), Query Frame = 0

Query:  458 SSAPDDRETDLEED----SDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKY 591
            +S+P   +TD+E      +D  Y ADTDV+ P  EN  +       FP LP++  +  F+F+G  +     L+ R +V + G+V  Y+D  V+FVV+   WD  FD A++ N  + FV P+++ +C+     +  K Y
Sbjct:  369 TSSPYMEDTDVEMSDYGSADESYKADTDVESPITENTKNIS-----FPQLPDYFHDVVFYFYGPLEN--ETLIKRIIVRAGGKVFPYMDPQVNFVVSEKLWDDNFDIAVKVNPKMRFVIPEYIMKCFEGNTKLPTKLY 499

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BLAST of dna repair protein xrcc1 vs. SwissProt
Match: gi|317373290|sp|P18887.2|XRCC1_HUMAN (RecName: Full=DNA repair protein XRCC1; AltName: Full=X-ray repair cross-complementing protein 1)

HSP 1 Score: 341.658 bits (875), Expect = 3.029e-108
Identity = 236/649 (36.36%), Postives = 329/649 (50.69%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDS-KASNGGEKV-ATKLGAFTLKPEDDSNLNVSVGSWF---SKKQDPKRTSLVGDMKSNQTLASLALASSQVEKAGIKGGVASQP---PKAAFYQLQDRPSPKAAGRPPPQ---KLPRRDVMPG-----ESPPRPARKPRVSQSTPSSTATKSSRPPKNTPKASPKAMRPFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRG-KGKIVKKDWVLDCHADRKRYPWRRFCLDPRDKGVESEEEVWDESLVPAASGEAM--------------------------DTDEEIEQVSRDLDTDEEIEQVRKQTSIQGNE-------------KQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            MPEIR+ HVVS SS+D    A+NLL  D  +KWR+ + GEK + V+LQLEK   I  +DIGNDGSAFVEV VG +  G     +  LLV SSFMSP ESR+  N  RVRMFG + L +   ++RWDRV++VC+QP++K   +G+SF+   S  D  +A    +KV  TKLG F +K ED+S  ++  G+ F     K  P   S              + A+S         G  S+P   PK       ++   K   +PP Q    +P+R  +P       + P PAR        P    T+  R     P+A P+ +    ++L+GV+  +SG+QNP R ELR KAL +GA YR DW+ D +HLICAFANTPK++QV G  G+IV+K+WVLDCH  R+R P RR+ +     G  SEE   DE+     SG+                             T EE +  S  L  D +IE V+ +    G E             +Q     P  +E + E+      D +TD +E       H +  D   P LP+F    HFF +G F   ERR L R V A  G++   +   V FV+T  +WD  F++AL DN +L FV P +++ C   ++L+  + Y +
Sbjct:    1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPFGLSFVRFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRR-----PRAGPEEL---GKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLM--AGPGSSSEE---DEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEE-------HQEPPDLPVPELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDNMSDRVQFVITAQEWDPSFEEALMDNPSLAFVRPRWIYSCNEKQKLLPHQLYGV 629

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BLAST of dna repair protein xrcc1 vs. SwissProt
Match: gi|84027730|sp|Q9ESZ0.2|XRCC1_RAT (RecName: Full=DNA repair protein XRCC1; AltName: Full=X-ray repair cross-complementing protein 1)

HSP 1 Score: 335.109 bits (858), Expect = 9.686e-106
Identity = 239/656 (36.43%), Postives = 342/656 (52.13%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDS--DGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDS-KASNGGEKV-ATKLGAFTLKPEDDSNLNVSVGSWFSKKQDPKRTSLVGD------MKSNQTLASLALASSQVEKAGIKGGVASQPPKAAF---YQLQD-RPSPKAAGRPPPQKLPRRDVMPGESPPRPARKPRVSQSTPSSTATKSSRPPK-----NTPKASPKAMRPFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRG-KGKIVKKDWVLDCHADRKRYPWRRFCL-----DPRDKGVESEEEVWDES-------LVPAASGEAM-------------------------DTDEEIEQVSRD------LDTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            MPEI + HVVS SS+D   +A+NLL  D  +KWRS + GEK + V+LQLEK   I  +DIGNDGSAFVEV VG +  G  +    +  LLV SSFMSP ESR+  N  RVR+FG + L +   ++RWDRV++VC+QP++K   YG+SF+   S  D  +A    +KV  TKLG F +K EDDS  ++  G+ F  + +   ++   D        +    +S A ++S V K G       +PPK        L+D +P  K +  PP  K P+         P P+R P    +TP+ST  + + P K       P+ +    +   ++L+GV+  +SG+QNP R ELR KAL +GA YR DW+ D +HLICAFANTPK++QV G  G+IV+K+WVLDC+  R+R P RR+ +        D+G    E   DE+         P A  +A                          DTD E +   RD       DT++E+ +V KQ       +Q    AP++   D    S    D +TD + P+          D   P LP+F    HFF +G F   ERR L R V A  G++  Y+   V FV+T  +WD  F++AL +N +L FV P +++ C   ++L+  + Y +
Sbjct:    1 MPEISLRHVVSCSSQDSTHRAENLLKADTYRKWRSAKAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGATAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPYGLSFVKFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDDSANSLRPGALFFNRINKAASASASDPAGPSYAAATLQASSAASSASPVPKVGGSSSKLQEPPKGKRKLDLGLEDKKPPSKPSAGPPAPKRPKL--------PVPSRTP---AATPASTPAQKAVPGKPRGEGTEPRGARAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCYRMRRRLPSRRYLMAGLGSSSEDEGDSHSESGEDEAPKLPRKRPQPKAKTQAAGPSSPPRPPTPEETKAPSPGPQDNSDTDGE-QSEGRDNGAEDSGDTEDELRRVAKQ------REQRQPPAPEENGEDPYAGST---DENTDSEAPS--------EADLPIPELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPNFEEALMENPSLAFVRPRWIYSCNEKQKLLPHQLYGV 627

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BLAST of dna repair protein xrcc1 vs. SwissProt
Match: gi|84028280|sp|Q60596.2|XRCC1_MOUSE (RecName: Full=DNA repair protein XRCC1; AltName: Full=X-ray repair cross-complementing protein 1)

HSP 1 Score: 335.109 bits (858), Expect = 1.011e-105
Identity = 230/652 (35.28%), Postives = 334/652 (51.23%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDS--DGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDS-KASNGGEKV-ATKLGAFTLKPEDDSNLNVSVGSWFSKKQDPKRTSLVGD------MKSNQTLASLALASSQVEKAGIKGGVASQPPKAAF---YQLQDR-PSPKAAGRPPPQKLPRRDVMPGESPPRPARKPRVSQSTPSSTATKSSRP--PKNTPKASPKAMRPFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRG-KGKIVKKDWVLDCHADRKRYPWRRFCL--------DPRDKGVESEEE----------------------------VWDESLVPAASGEAMDTDEEIEQVSRD------LDTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            MPEI + HVVS SS+D    A+NLL  D  +KWR+ + GEK + V+LQLEK   I  +DIGNDGSAFVEV VG +  G  +    +  LLV SSFMSP ESR+  N  RVR+FG + L +   ++RWDRV++VC+QP++K   YG+SF+   S  D  +A    +KV  TKLG F +K EDDS  ++  G+ F  + +   ++   D        +    +S A ++S V K         +PPK        L+DR P  K +  P   K P+  V        P+R P  + ++  +      +P      P+ +    +   ++L+GV+  +SG+QNP R ELR KAL +GA YR DW+ D +HLICAFANTPK++QV G  G+IV+K+WVLDCH  R+R P RR+ +        D  D   ES E+                               E+  P+   +     E  E   RD       DT++E+ +V KQ       +Q    AP   E + E+      D +TD + P+          D   P LP+F    HFF +G F   ERR L R V A  G++  Y+++ V FV+T  +WD  F++AL +N +L FV P +++ C   ++L+  + Y +
Sbjct:    1 MPEISLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGATAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPYGLSFVKFHSPPDKDEAEATSQKVTVTKLGQFRVKEEDDSANSLKPGALFFSRINKTSSASTSDPAGPSYAAATLQASSAASSASPVPKVVGSSSKPQEPPKGKRKLDLSLEDRKPPSKPSAGPSTLKRPKLSV--------PSRTPAAAPASTPAQRAVPGKPRGEGTEPRGARTGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHHMRRRLPSRRYLMAGLGSSSEDEGDSHSESGEDEAPKLPQKRPQPKAKTQAAGPSSPPRPPTPKETKAPSPGPQDNSDTEGEESEGRDNGAEDSGDTEDELRRVAKQ------REQRQPPAP---EENGEDPYAGSTDENTDSETPS--------EADLPIPELPDFFEGKHFFLYGEFPGDERRRLIRYVTAFNGELEDYMNERVQFVITAQEWDPNFEEALMENPSLAFVRPRWIYSCNEKQKLLPHQLYGV 627

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BLAST of dna repair protein xrcc1 vs. SwissProt
Match: gi|122195550|sp|Q24JK4.1|XRCC1_ARATH (RecName: Full=DNA-repair protein XRCC1; Short=AtXRCC1; AltName: Full=Homolog of X-ray repair cross complementing 1)

HSP 1 Score: 100.138 bits (248), Expect = 1.010e-21
Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 0

Query:  308 FKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGK-GKIVKKDWVLDCHADRK-----RY------PWRRFCLDPRDKGVESEEEV 407
            F +L+EGV+F +SG+ NP R  LR +ALTMGA Y+ DW++  + LICAF NTPKF QV    G I+ K+W+ +C+A +K     +Y      PWR+    P+D   E  E +
Sbjct:   59 FSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVETNGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSS-SPQDANREKREHL 169

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BLAST of dna repair protein xrcc1 vs. SwissProt
Match: gi|81870458|sp|O54935.1|XRCC1_CRIGR (RecName: Full=DNA repair protein XRCC1; AltName: Full=X-ray repair cross-complementing protein 1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.040e-15
Identity = 50/164 (30.49%), Postives = 79/164 (48.17%), Query Frame = 0

Query:  435 DTDEEIEQV-----RKQTSIQGNEKQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            DT++E+ +V     ++Q    G   +D  +   D  TD E        A T+ D P               P LP+F    HFF +G F   ERR L R V A  G++  Y+ + V FV+T  +WD  F++AL +N +L FV P +++ C   ++L+  + Y +
Sbjct:  488 DTEDELRRVAEQREQRQPPAPGENGEDPYAGSTDENTDNE--------ASTEADLP--------------IPELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSERVQFVITAQEWDPIFEEALMENPSLAFVRPRWIYSCNEKQKLLPHQLYGV 629

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BLAST of dna repair protein xrcc1 vs. SwissProt
Match: gi|74722933|sp|Q6ZNB5.1|TRC2L_HUMAN (PUTATIVE PSEUDOGENE: RecName: Full=Putative short transient receptor potential channel 2-like protein; Short=TrpC2-like protein)

HSP 1 Score: 75.485 bits (184), Expect = 6.045e-15
Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEK--RVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMF 111
            M  ++I+HVVSFSS+DP +  +NLL  D  ++     P +K  ++ V LQLE+A    +ID+GN G AF+++ VG +    D   F +LL A++ MS  +S+  +N+  VRMF
Sbjct:    1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPRRPWLGCPQDKSGQLKVELQLERAVPTGYIDVGNCGCAFLQIDVGHSSWPLDRP-FITLLPATTLMSLTDSKQGKNRSGVRMF 112

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BLAST of dna repair protein xrcc1 vs. nr
Match: gi|1168972220|ref|XP_020445870.1| (DNA repair protein XRCC1 [Monopterus albus])

HSP 1 Score: 389.808 bits (1000), Expect = 2.248e-124
Identity = 248/654 (37.92%), Postives = 344/654 (52.60%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVG----RTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDSK--ASNGGEKVATKLGAFTLKPEDD-SNLNVSVGSWFSKKQDPKRTSLVGDMKSNQTLASLALASSQVEKAGIK---------GGVASQPPKAAFYQLQDRPSPKAAGRPPPQKLPRRDVMPGESPPRPARKPRVSQS---TPSSTATKSS---------RPPKNTPKASPKAMR---------PFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGKGK-IVKKDWVLDCHADRKRYPWRRFCLDPRDKGVESEEEVWDES---------------LVPAASGEAMDTDEEIEQVSRDLDTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLE----EDSDAVYDADTDVDEPAG----ENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            MPEI++ HVVS S+EDP  KADNLL  D  +KW++  PGEK+  VILQ EK   +  IDIGN+GSAF+EV VG    R QD      F  LLV SSFMSP ESRN  N  RVR FG + L +   +E+WDRV++VCTQP+NK + YG++F+T  S  D          KV TKLG F LK E   S  ++  GS F  + +  ++S    +K+      L+ A++ ++  G              + QPP    ++     S +    P P   P + + PG SP   A  P+  QS   TPS    K+S         R  ++ PK  PK  +         PF R++EGV+F +SG+QNP RGELR+KAL MGA YRSDW+ D +HLICAFANTPK++QV+  G  IV+K+WV+DCH  +++  ++R+ +D  +   ESE E  D+S               + P  + E    +E+ E+ +R  D +E            G +  D S    D E +L+    E       A+   D+P G    EN       D   P LP+FLS  HFF FG F   ERRLL R +VA  G +  Y+ + V FVVT   W   F+ AL DN  L+FV P +++     ++++  + Y +
Sbjct:    1 MPEIKLKHVVSCSTEDPTHKADNLLSADTYRKWKAARPGEKQTSVILQFEKEDQVHSIDIGNEGSAFIEVLVGKSAIREQD------FEVLLVTSSFMSPTESRNGTNLNRVRFFGPDQLQKTTAQEKWDRVKIVCTQPYNKNIAYGLAFVTFHSPPDKNDPPPTASPKV-TKLGQFRLKDESPLSGSSLQPGSLFFNRDNATKSS--SSLKAPSQSEKLSYAAAALQAGGTSHSSGPVSSSNPASPQPPTKRKFEF----SKERHSDPGP---PLKKISPGGSPEDQAATPKHKQSKASTPSPGVLKASPAQKSVDKKRESRSKPKTEPKQQKTKPQSGQEVPFSRIMEGVVFVLSGFQNPFRGELREKALDMGAKYRSDWTPDSTHLICAFANTPKYSQVKSAGGIIVQKEWVMDCHKRKQKISYKRYLMDGAESTSESEMEGEDQSDEEMNTKTPQKQERRVTPKQTPEKHRDEEDDEEYARSTDVEEP-----------GGDDDDESGV--DTEDELQRVEKESRQKKAAAEVKADDPYGGSTDENTDAEAEEDHPIPELPDFLSGKHFFLFGKFPNNERRLLLRYIVAFNGVIEDYMTEKVQFVVTSEGWQDSFEDALMDNCNLNFVKPAWIYAINERQKMLPYQPYSV 625

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BLAST of dna repair protein xrcc1 vs. nr
Match: gi|926614441|ref|XP_013772266.1| (DNA repair protein XRCC1-like [Limulus polyphemus] >gi|1238840384|ref|XP_022239020.1| DNA repair protein XRCC1-like [Limulus polyphemus])

HSP 1 Score: 385.571 bits (989), Expect = 4.716e-123
Identity = 229/630 (36.35%), Postives = 339/630 (53.81%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDSKASNGGEKVA------TKLGAFTLKPEDDSNLNVSVGSWFSKKQDPKR-------------TSLVGDMKSNQTLASLALASSQVEKAGIKGGVASQPPKAAFYQLQDRPSPKAAGRPPPQKLPRRDVMPGESPPRPA-RKPRVSQSTPSSTATKSSRPPKNTPKASPKAMR-----------PFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGKG-KIVKKDWVLDCHADRKRYPWRRFCLDPRDKGVESEEEVWDE----SLVPAASGEAMDTDEEIEQVSRDLDTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLIS 594
            MP I+I H+VSFSSED V KA+NL+  +  +KW+   PGE +  V++Q EKAS I  IDIGN+GSAFVE+ V R+ D   S  F+ LLVASSFM+PLESR   N  RVRMFG E L+     ++WD  ++VCTQPFNK  ++GISFI   S  D   ++  E          K+GAF LKP + S  ++SVGSWF+K+++ K              +SL   + S     S +   S+ +  G +GG  + P +    +L       +A +   +   +       S PRP+ +K    +S  +    K  +  +N    S K  R           PF +L++ V+F +SG+QNP R ELR KA  MGA Y+ DW+  C+HL+CAF NTPK+ QV  KG +IV K W+LDCH   K  PWR + L    K   +EE+   E    ++V     +  D   ++E V  ++DT++EI++V++                        +D++++Y+ DTD+DE  G      D+     P +P+F  N  FF +G F   ERR+L R +    G +  Y+  +V +VVT A+WD  FD+ALE+NS L FV P +++ C    +++  + Y+++
Sbjct:    1 MPPIQIKHIVSFSSEDKVHKAENLIKPETYRKWKCASPGENQASVVVQFEKASEICSIDIGNEGSAFVEILVQRSSD--PSQEFQVLLVASSFMTPLESRQGTNLNRVRMFGPEKLSLCTSNQKWDIAKIVCTQPFNKNTQFGISFIKFHSPPDLATTSEDEVSGELQIQPKKIGAFMLKPSETSENDLSVGSWFAKRKEKKEPDPETGPAAIREASSLAAAVPSPSASNSSSYKPSKQKNTG-RGGNGASPSEFIKQKLLASTKQSSAEKYNRESYTKEKTT---SSPRPSEQKCTGKESRKNIVKRKRKQSAENEETPSNKVQREAKGFHKVKEGPFNQLMKKVVFVLSGFQNPFRSELRDKACAMGARYKGDWNDSCTHLVCAFVNTPKYTQVLSKGGRIVTKHWILDCHKKSKLLPWRDYKLGNYSKENTTEEDSGSEEDKNTIVQKNLVDKYDKGSDVESVDTEVDTEDEIKRVQEG-----------------------KDTESIYEEDTDIDEDGGLEDIKPDTSHLPLPHIPDFFKNKVFFLYGEFSTEERRILLRYIKGHCGSIEEYMSDNVQYVVTLAQWDKNFDEALEENSNLVFVRPRWIYLCNEKGKMMPYQPYVVA 601

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BLAST of dna repair protein xrcc1 vs. nr
Match: gi|1025440455|ref|XP_016527855.1| (PREDICTED: DNA repair protein XRCC1 isoform X2 [Poecilia formosa])

HSP 1 Score: 375.17 bits (962), Expect = 1.010e-118
Identity = 239/652 (36.66%), Postives = 345/652 (52.91%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDSKASNGGEKVATKLGAFTLKPED-DSNLNVSVGSWFSKKQDPKRTSLVGDMKSNQTLASLALASSQVEKAGIKGGVAS-------QPP-KAAFYQLQDRPSPKAAGRPPPQKLPRRDVMPGESPPRPARKPRVSQS---TPSSTATKS--------------SRP---PKNTPKASPKAMRPFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGKGK-IVKKDWVLDCHADRKRYPWRRFCLDPRDKGVESEEEVWDES---------------LVPAAS----------GEAMDTDEEIEQVSRD---LDTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLIS 594
            MPEI + HV+S S+ED   KA+NLL +D  +KW++ +PGEK+  VILQ EK   +  IDIGN+GSAF+EV VG +   +D D +  LLV SSFMSP ESRN  N  RVR FG   L +   +E+WDRV++VC+QP++K + YG++F+   S  D           TKLG F +K E   S  ++  GS F  + +  + S    +       S A A+ Q   +    G AS       QPP K  F   ++R SP  +G PP +K+      PG SP   A  P+   S   TPS +  K+              S+P   PK   K+  +   PF RL+EGV+F +SG+QNP RGELR+KAL MGA YR DW+ D +HLICAFANTPK++QV+  G  IV+K+WV+DCH  +++   +R+ +D  +   ESE +  D+S               + P  +          G + D DE  E    D   +DT++E+++V          KQ  ++A   +E+  +E+       D + D  A E        D   P LP+FL   HFF +G F   ERRLL R +VA  G++  Y+ + V FVVT   W   F+ AL +N  L+FV P +++     ++++  + Y ++
Sbjct:    1 MPEIPLKHVISCSTEDSTHKANNLLSSDTYRKWKASKPGEKQTSVILQFEKEEQVHSIDIGNEGSAFIEVLVGNSSAVKDQD-YEVLLVTSSFMSPTESRNGTNMNRVRFFGPNQLQKSTAQEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKTDPPPSSPKLTKLGQFRVKDESPSSGPSLQPGSLFFSRDNATKPSTSLKVSPQSDKLSYAAAALQARGSSQSPGQASTSISASPQPPAKRKFEFSKERQSP--SGPPPTKKM-----SPGGSPETKAATPKYKPSPVGTPSLSTAKASSAKKSAEKKKESQSKPEPKPKLKTKSKSEQQVPFHRLMEGVVFVLSGFQNPFRGELREKALEMGAKYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISHKRYLMDGAESSSESETDGDDQSEEEIETKTPQKQAKQVTPKKTPEKKHEDDEYGGSTDVDEPGEDEGDDESGVDTEDELQRVES--------KQKKAAA---KESSAKEEDPYGGSTDENTDAEAEE--------DHPIPELPDFLHGKHFFLYGKFPNNERRLLLRYIVAFNGEIEEYMSEKVQFVVTSGGWHESFEDALMENCNLNFVKPSWIYAINERQKMLPYQPYTVA 625

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BLAST of dna repair protein xrcc1 vs. nr
Match: gi|1079771075|ref|XP_018555359.1| (PREDICTED: DNA repair protein XRCC1 [Lates calcarifer])

HSP 1 Score: 374.015 bits (959), Expect = 2.941e-118
Identity = 244/652 (37.42%), Postives = 350/652 (53.68%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQD-SKASNGGEKVATKLGAFTLKPED-DSNLNVSVGSWFSKKQDPKRTSLVGDMKSNQTLASLALASSQVEKAGIK---GGVAS------QPP-KAAFYQLQDRPSPKAAGRPPPQKLPRRDVMPGESPPRPARKPR---VSQSTPSSTATKSSRPPK-------NTPKASPKAMR---------PFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGKGK-IVKKDWVLDCHADRKRYPWRRFCLDPRDKGV--------ESEEEV-------WDESLVPAASGEAMDTDEEIEQVSRDL------------DTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            MPEI++ HVVS S+ED   KADNLL +D  +KW++  PGEK+  VILQ EK   +  IDIGN+GSAF+EV VG +   +D D +  LLV SSFMSP ESRN  N  RVR FG   L +   +E+WDRV++VC+QP++K + YG++F+   S  D +          TKLG F +K E   S  ++  GS F  + +  ++S    +K +     L+ AS+ ++  G+    G  AS      QPP K  F   ++R S  A G PP +K     + P  SP   A  P+      STPS  A K+S   K       N  K  PK  +         PF R+++GV+F +SG+QNP RGELR+KAL MGA YR DW+ D +HLICAFANTPK++QV+  G  IV+K+WV+DCH  +++  ++R+ +D  +           +SEEE+        D  + P  + E    D++    S DL            DT++E+++V K     GN ++  ++   + +T  EED    Y   TD      EN       D   P LP+FLS  HFF +G F   ERRLL R +VA  G +  Y+ + V FVVT   W   F+ AL +N  L+FV P +++     ++++  + Y +
Sbjct:    1 MPEIKLKHVVSCSTEDTTHKADNLLSSDTYRKWKAARPGEKQTSVILQFEKEEQVHSIDIGNEGSAFIEVLVGNSSAVRDQD-YEVLLVTSSFMSPTESRNGTNMNRVRFFGPSQLQKSTAQEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKNDPPPATSPKLTKLGQFKVKDESPSSGPSLQPGSLFFSRDNASKSS--ASLKVSPQGERLSYASAALQAGGLSHSSGQAASSNSASPQPPAKRKFEFSKERQS--APGPPPSKK-----ISPAGSPEGKAATPKHKPSPASTPSPGAAKASLAQKSADKRRENQSKPEPKQQKAKSQDVQQVPFNRIMQGVVFVLSGFQNPFRGELREKALDMGAKYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISYKRYLMDGAESSSESEMEVDDQSEEEMNTKTPQKQDRQVTPKKTPEKRKEDDDEYDGSTDLDEPGGDDDESAVDTEDELQRVEK-----GNRQKKAAA---EVKTVKEEDP---YGGSTD------ENTDAEAEEDHPIPELPDFLSGKHFFLYGKFPNNERRLLLRYIVAFNGVIEDYMTEKVQFVVTSEGWHDSFEDALMENGNLNFVKPAWIYAINERQKMLPYQPYSV 625

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BLAST of dna repair protein xrcc1 vs. nr
Match: gi|1188086442|ref|XP_020789306.1| (DNA repair protein XRCC1 [Boleophthalmus pectinirostris])

HSP 1 Score: 373.244 bits (957), Expect = 4.700e-118
Identity = 243/651 (37.33%), Postives = 344/651 (52.84%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDSK--ASNGGEKVATKLGAFTLKPEDDS-NLNVSVGSWFSKKQDPKRTSLVGDMKSNQTLASLALASSQVEKAGIKGGVASQPP----------KAAFYQLQDRPSPKAAGRPPPQKLPRRDVMPGESPPRPARKPRVSQSTPSSTATKSSRPPKNT---------PKASPKAMR---------PFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGKGK-IVKKDWVLDCHADRKRYPWRRFCLDPRDKGV--------ESEEEV-----WDESLVPAAS------------GEAMDTDEE-IEQVSRDLDTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            MPEI++ HVVS S+ED   KADNLL +D  +KW++  PGEK+  VI+Q EK   +  IDIGN+GSAF+EV VG +   +D D +  LLV SSFMSP ESRN  N  RVR FG   L +   +E+WDRV++VCTQP++K + YG++F+   S  D     +    K+ TKLG F LK E  S   ++  GS FS  +        G++K++     L+ A++ ++ +G     +              K  +   Q+R S  A G PP +K       P  SP   A  P+   S  S+ + K+S  PK +         P A PK  +         PF RLLEGV+F +SG+QNP RGELR+KAL MGA YR DW+SD +HLICAFANTPK++QV+  G  IV+K+WV+DCH  R+   ++R+ +D  +           +S+EEV         + P  +            G + D DE   +     +DT++E+++V K       E +   +A   +    EED    Y A TD      EN      LD+  P LP+FLS  HFF +G F   ERRLL R +VA  G +  Y+   V FVVT   W   F+ AL +N  L+FV P +++     ++L+  + Y +
Sbjct:    1 MPEIKLKHVVSCSTEDTTHKADNLLSSDTYRKWKAARPGEKQTSVIIQFEKEEQVHSIDIGNEGSAFIEVLVGNSSASRDQD-YEVLLVTSSFMSPTESRNGTNLNRVRFFGPAQLQKSTAQEKWDRVKIVCTQPYSKNIAYGLAFVKFHSPPDKNDPPATTPPKL-TKLGQFRLKDESPSAGPSLQPGSLFSAAKS------SGELKASPQKEKLSYAAAALKTSGSAHSTSQASSSSSASPQAPVKRKYEFSQERQS--APGPPPAKK-----ASPMGSPENKAATPKHKASPISTPSAKASPAPKTSEKKRESLSKPDAKPKPQKAKSQSSQQVPFNRLLEGVVFVLSGFQNPFRGELREKALEMGAKYRPDWTSDSTHLICAFANTPKYSQVKAAGGIIVRKEWVMDCHKRRQNISFKRYLMDGAESSSESEMEADDQSDEEVNTKMPQKRQVTPKKTPQKKDDDDDDEYGGSTDIDEAGGDDDESAVDTEDELQRVEK-------ENKQKKAAGAVKAVKEEEDP---YGASTD------ENTDAEAELDQPIPVLPDFLSGKHFFLYGKFPNNERRLLLRYIVAFNGAIEDYMTDKVQFVVTSEGWQDSFEDALMENGNLNFVKPAWIYAINERQKLLPYQPYTV 620

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BLAST of dna repair protein xrcc1 vs. nr
Match: gi|961805193|ref|XP_014909097.1| (PREDICTED: DNA repair protein XRCC1 [Poecilia latipinna])

HSP 1 Score: 373.244 bits (957), Expect = 4.922e-118
Identity = 238/652 (36.50%), Postives = 343/652 (52.61%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDSKASNGGEKVATKLGAFTLKPED-DSNLNVSVGSWFSKKQDPKRTSLVGDMKSNQTLASLALASSQVEKAGIKGGVAS-------QPP-KAAFYQLQDRPSPKAAGRPPPQKLPRRDVMPGESPPRPARKPRVSQS---TPSSTATKS--------------SRP---PKNTPKASPKAMRPFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGKGK-IVKKDWVLDCHADRKRYPWRRFCLDPRDKGVESEEEVWDES---------------LVPAASGEAMDTDEEI-------EQVSRD-------LDTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            MPEI + HV+S S+ED   KA+NLL +D  +KW++ +PGEK+  VILQ EK   +  IDIGN+GSAF+EV VG +   +D D +  LLV SSFMSP ESRN  N  RVR FG   L +   +E+WDRV++VC+QP++K + YG++F+   S  D           TKLG F +K E   S  ++  GS F  + +  + S    +       S A A+ Q   +    G AS       QPP K  F   ++R SP  +G PP +K+      PG SP   A  P+   S   TPS +  K+              S+P   PK   K+  +   PF RL+EGV+F +SG+QNP RGELR+KAL MGA YR DW+ D +HLICAFANTPK++QV+  G  IV+K+WV+DCH  +++   +R+ +D  +   ESE +  D+S               + P  + E    D+E        E    D       +DT++E+++V          KQ  ++A   +E+  +E+       D + D  A E        D   P LP+FL   HFF +G F   ERRLL R +VA  G++  Y+ + V FVVT   W   F+ AL +N  L+FV P +++     ++++  + Y +
Sbjct:    1 MPEIPLKHVISCSTEDSTHKANNLLSSDTYRKWKASKPGEKQTSVILQFEKEEQVHSIDIGNEGSAFIEVLVGNSSAVKDQD-YEVLLVTSSFMSPTESRNGTNMNRVRFFGPNQLQKSTAQEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKTDPPPSSPKLTKLGQFRVKDESPSSGPSLQPGSLFFSRDNATKPSTSLKVSPQSDKLSYAAAALQARGSSQSPGQASTSISASPQPPAKRKFEFSKERQSP--SGPPPTKKM-----SPGGSPETKAATPKYKPSPVGTPSPSTAKASSAKKSAEKKKESQSKPEPKPKLKTKSKSEQQVPFNRLMEGVVFVLSGFQNPFRGELREKALEMGAKYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISHKRYLMDGAESSSESETDGDDQSEEEIETKTPQKQAKQVTPKKTPEKKHEDDEYGGSTDVDEPAGEDEGDDESGVDTEDELQRVES--------KQKKAAA---KESSAKEEDPYGGSTDENTDAEAEE--------DHPIPELPDFLHGKHFFLYGKFPNNERRLLLRYIVAFNGEIEEYMSEKVQFVVTSGGWHESFEDALMENCNLNFVKPSWIYAINERQKMLPYQPYTV 625

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BLAST of dna repair protein xrcc1 vs. nr
Match: gi|1242801011|ref|XP_022341040.1| (DNA repair protein XRCC1-like [Crassostrea virginica])

HSP 1 Score: 373.244 bits (957), Expect = 4.958e-118
Identity = 248/638 (38.87%), Postives = 347/638 (54.39%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDSKASNGGEKVATKLGAFTLKPEDDSNLNVSVGSWFSKKQDPKRTSLVGDMKSNQTLASLALASSQVEKA-GIKGGVASQPPKAAFYQLQDRPSPKAAGRPPPQKLPRRDVMPGESPPRPARKPRVSQSTPSSTATKSSRPPK--NTPKASPKAMRPFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGKGKIVKKDWVLDCHADRKRYPWRRFCLDPRD--KGVESEEEVWDESLVPAASGEAMDT-----DEEIEQVSRDLDTDEEIEQVRKQTSIQGNEK---QDTSSAPDDRETDLE----------EDSDAVYDADTDVDEPA----------------------GENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            MP I+  HVVSFS+ +    A+NLL  +G  KW+   P  K   V+LQ EK + I  IDIGN+GSAFVEV VG++    + D +  LLVASSFM+P+ESRNE N+  VRMFG E LN+ +  ++WDRV++VCTQPFNK   YG+SFIT  S   +      E  A K+GAFTLKPE  S   +S GS F KK++   T L G        A++  AS   E++ G  G      P      L D+PS    G    +K    D      PPRP  K + +  +  ++++K +  PK   T   +    +PF +L+EGV+F +SG+QNP RGELR KA  MGA Y+ DW   C+HLICAF NTPK+NQV+GKGKIVKK+W+   +  +   PWR++ L   D  +G  SEEE  +E   PA      +T     D+++ +        ++     + T ++G +     DT S   D E +LE          +DS+   D+ TD DEPA                      G   T  DS D   P LP++ ++ HFF +G F  +ERRLLTR + A +G++  Y++  V FV+T + WD  FD AL D+  L FV P ++H C   ++L+  + Y++
Sbjct:    1 MPIIKPQHVVSFSNAETNHPAENLLKPEGTYKWKV--PPGKPATVVLQFEKVTEIHSIDIGNEGSAFVEVLVGKSTATSEQD-YEVLLVASSFMTPVESRNETNRNSVRMFGPEKLNKSVAAQKWDRVKIVCTQPFNKTASYGLSFITFHSPPAANEQKEKESGAKKIGAFTLKPE--SEDPISTGSIFGKKKE-VTTPLTG-------AAAVRAASKLAEESRGTPGKNTEIKPVKKEATLSDKPSTSQGGSK--RKHAVSDDEDEAPPPRPPMKKQSTSISSVASSSKGADKPKIKRTKSDTSGHSKPFHKLMEGVVFVLSGFQNPFRGELRDKAQEMGAEYKPDWKKGCTHLICAFQNTPKYNQVKGKGKIVKKEWIQHMYKQKTALPWRKYRLGDADTPEGT-SEEESENEDHTPAKKQPVKNTTSKEKDKQLPEKQSTKSKSKKGVNFDEDTDLEGGDAPYGGDTDSG-GDTEDELERVKAKLASESKDSNPYGDS-TDEDEPAKKSKPSPSKNTSDSKPSTSQHSGAMKTGEDSDDSGLPELPDYFTDKHFFLYGDFPGSERRLLTRYITAYDGEIEEYMNDKVHFVITNSDWDKNFDDALSDHPQLVFVKPKWIHMCHEKEKLMPYQHYIV 620

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BLAST of dna repair protein xrcc1 vs. nr
Match: gi|617405946|ref|XP_007553865.1| (PREDICTED: DNA repair protein XRCC1 isoform X1 [Poecilia formosa])

HSP 1 Score: 373.244 bits (957), Expect = 5.843e-118
Identity = 238/653 (36.45%), Postives = 344/653 (52.68%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDSKASNGGEKVATKLGAFTLKPED-DSNLNVSVGSWFSKKQDPKRTSLVGDMKSNQTLASLALASSQVEKAGIKGGVAS-------QPP-KAAFYQLQDRPSPKAAGRPPPQKLPRRDVMPGESPPRPARKPRVSQS---TPSSTATKS--------------SRP---PKNTPKASPKAMRPFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGKGK-IVKKDWVLDCHADRKRYPWRRFCLDPRDKGVESEEEVWDES---------------LVPAASGEAMDTDEEI-------EQVSRD-------LDTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLIS 594
            MPEI + HV+S S+ED   KA+NLL +D  +KW++ +PGEK+  VILQ EK   +  IDIGN+GSAF+EV VG +   +D D +  LLV SSFMSP ESRN  N  RVR FG   L +   +E+WDRV++VC+QP++K + YG++F+   S  D           TKLG F +K E   S  ++  GS F  + +  + S    +       S A A+ Q   +    G AS       QPP K  F   ++R SP  +G PP +K+      PG SP   A  P+   S   TPS +  K+              S+P   PK   K+  +   PF RL+EGV+F +SG+QNP RGELR+KAL MGA YR DW+ D +HLICAFANTPK++QV+  G  IV+K+WV+DCH  +++   +R+ +D  +   ESE +  D+S               + P  + E    D+E        E    D       +DT++E+++V          KQ  ++A   +E+  +E+       D + D  A E        D   P LP+FL   HFF +G F   ERRLL R +VA  G++  Y+ + V FVVT   W   F+ AL +N  L+FV P +++     ++++  + Y ++
Sbjct:    1 MPEIPLKHVISCSTEDSTHKANNLLSSDTYRKWKASKPGEKQTSVILQFEKEEQVHSIDIGNEGSAFIEVLVGNSSAVKDQD-YEVLLVTSSFMSPTESRNGTNMNRVRFFGPNQLQKSTAQEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKTDPPPSSPKLTKLGQFRVKDESPSSGPSLQPGSLFFSRDNATKPSTSLKVSPQSDKLSYAAAALQARGSSQSPGQASTSISASPQPPAKRKFEFSKERQSP--SGPPPTKKM-----SPGGSPETKAATPKYKPSPVGTPSLSTAKASSAKKSAEKKKESQSKPEPKPKLKTKSKSEQQVPFHRLMEGVVFVLSGFQNPFRGELREKALEMGAKYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISHKRYLMDGAESSSESETDGDDQSEEEIETKTPQKQAKQVTPKKTPEKKHEDDEYGGSTDVDEPAGEDEGDDESGVDTEDELQRVES--------KQKKAAA---KESSAKEEDPYGGSTDENTDAEAEE--------DHPIPELPDFLHGKHFFLYGKFPNNERRLLLRYIVAFNGEIEEYMSEKVQFVVTSGGWHESFEDALMENCNLNFVKPSWIYAINERQKMLPYQPYTVA 626

[Close]

BLAST of dna repair protein xrcc1 vs. nr
Match: gi|1009587833|ref|XP_015923169.1| (DNA repair protein XRCC1 isoform X1 [Parasteatoda tepidariorum] >gi|1192747968|ref|XP_021003673.1| DNA repair protein XRCC1 isoform X2 [Parasteatoda tepidariorum])

HSP 1 Score: 372.859 bits (956), Expect = 1.361e-117
Identity = 241/666 (36.19%), Postives = 346/666 (51.95%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDSKASNGGE----KVATKLGAFTLKPEDDSNLNV-SVGSWFSKKQDPKRTSLVGDMKSNQTLASLALASSQVEKAGIKGGVASQPPKAAFYQLQDRPSPKAAGRPPP-----QKLPRRDVMPG----ESPPRPARKPR------VSQSTPSSTATKSSRPPKNTPKASPKAMR--------PFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGK-GKIVKKDWVLDCHADRKRYPWRRFCLDPRDKGVESEEEVWDESLVPAASGEAMDTDEEIEQVSRDLDTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLEEDSDAV--YDADTDVDEPAG--------------------------------------ENG----THSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            MPEI++ HVVSFSSED V K++NLL  +  +KW+   PGEK   VILQ EKA+ I  IDIGN+ SAFVEV VGR+ D    + ++ LLVASSFMSP+ESRNE++  RVRMFG E L Q L +E+WD V+VVCTQPFNK + YG+SFI   S  +  A    E        KLGAF +K  DD   +   VGSW  +K     +SL    K + + A++ L+S+   K        SQ P    Y   D   P A    P       K+  +D++      +S    ++K +         +T +S +  +SR P +    + KA+         PFK L++GV+F ISG+ NPLR E+R KAL MGA Y+ DW   C+HL+CAF NTPK+ QV+ + GKIV KDW++DCH  R   PW+++ L    +      E  +E + P    +          ++    T+  +     + + + N K+  +   D+ ET   ED DA+  Y ADTD +E +G                                      E+G    T  D+     P LPN     HF+ FG F +++   LTR + A  G++  Y+  SV +V+T +KWD  F++AL +N  L FV P+++ +C   ++L+  + Y+I
Sbjct:    1 MPEIKLKHVVSFSSEDKVHKSENLLNPETYRKWKCATPGEKNASVILQFEKATKIHSIDIGNESSAFVEVLVGRSSDS--VNDYKVLLVASSFMSPIESRNEQHSNRVRMFGPEKLAQNLKEEKWDCVQVVCTQPFNKNITYGLSFIKFLSPPEKIAERPVEPESKTTTAKLGAFKIKYNDDEEDDSPPVGSWLERKNKVINSSLKKTDKDSPSYAAMVLSSNDSSKT------TSQNPVKRKYIDSDIEKPPAKKESPSVRVNKAKVGYKDILGSKNSEDSNSNQSKKEKFGPKDIFGLNTSNSNSPTTSRKPVSKMIEASKALTKDRTNSKPPFKELMKGVVFVISGFVNPLRSEIRDKALEMGAKYKGDWDRTCTHLVCAFINTPKYVQVKDENGKIVTKDWIIDCHKKRALLPWKKYMLGRYARNSSESSESEEEVVKPKPMRKITSP-----VLNGSAKTNSPLPSPTPKKADKTNSKRVLTDEYDESET---EDEDAIEDYLADTDKEEDSGGDTEDEIRKIEKEIKQKNEKFSPEVISLEGDDCLESDEESGSLLQTKPDTSHLPLPELPNLFKAKHFYLFGNFSQSKSHDLTRYITAYNGKIEDYMSDSVKYVITESKWDSNFEEALAENEDLIFVKPEWIFKCHEKEKLVPYQPYII 650

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BLAST of dna repair protein xrcc1 vs. nr
Match: gi|1228993159|ref|XP_022061200.1| (DNA repair protein XRCC1 [Acanthochromis polyacanthus])

HSP 1 Score: 370.548 bits (950), Expect = 6.114e-117
Identity = 233/651 (35.79%), Postives = 353/651 (54.22%), Query Frame = 0

Query:    1 MPEIRIAHVVSFSSEDPVFKADNLLLNDGKKKWRSQEPGEKRVWVILQLEKASHIDHIDIGNDGSAFVEVQVGRTQDGQDSDGFRSLLVASSFMSPLESRNEENQCRVRMFGRETLNQGLVKERWDRVRVVCTQPFNKQVKYGISFITLKSFQDSK--ASNGGEKVATKLGAFTLKPED-DSNLNVSVGSWFSKKQDPKRTS--LVGDMKSNQ-TLASLAL----ASSQVEKAGIKGGVASQPP-KAAFYQLQDRPSPKAAGRPPPQKLPRRDVMPGESPPRPARKPRV------------SQSTPSSTATKSSRPPKNTPKASPK--------AMRPFKRLLEGVIFTISGYQNPLRGELRQKALTMGANYRSDWSSDCSHLICAFANTPKFNQVRGKGK-IVKKDWVLDCHADRKRYPWRRFCLDPRDKGV--------ESEEEV-------WDESLVPAASGEAMDTDEE------IEQVSRD-----LDTDEEIEQVRKQTSIQGNEKQDTSSAPDDRETDLEEDSDAVYDADTDVDEPAGENGTHSDSLDKDFPPLPNFLSNTHFFFFGLFDKAERRLLTREVVASEGQVHAYLDKSVDFVVTRAKWDCEFDQALEDNSALHFVTPDFVHQCWRSKELISPKKYLI 593
            MPEI++ HVVS S+ED   KADNLL +D  +KW++  PGEK+  VILQ EK   +  IDIGN+GSAF+EV VG +   +D D +  LLV SSFMSP ESRN  N  RVR FG   L +   +E+WDRV++VC+QP++K + YG++F+   S  D          K+ TKLG F +K E   S  ++  GS F  + +  ++S  L   ++S + + A+ AL    +S+   +A      + QPP K  F   ++R S  A G PP +K       P  SP   A  P+             ++++P+  +++  R  ++ P+  PK           PFKR++EGV+F +SG+QNP RGELR+KAL MGA YR DW+ D +HLICAFANTPK++QV+  G  IV+K+WV+DCH  +++  ++R+ +D  +           +SEEE+        +  +    + +  D D+E      +++   D     +DT++E+++V K++     +K      P   E      +D   DA+ + D P               P LP+FLS  HFF +G F   ERRLL R +VA  G +  Y+ + V FVVT   W   F+ AL +NS L+FV P +++     ++++  + Y +
Sbjct:    1 MPEIKLKHVVSCSTEDNTHKADNLLSSDTYRKWKAARPGEKQTSVILQFEKEEQVHSIDIGNEGSAFIEVLVGNSSAVRDQD-YEVLLVTSSFMSPTESRNGTNMNRVRFFGPNQLQKSTSQEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKNDPPPTSSPKL-TKLGQFRVKDESPSSGTSLQPGSLFFNRDNAAKSSTPLKASLQSEKLSYAAAALQAGGSSNSAGQASSSNSASPQPPAKRKFEFSKERQS--APGPPPSKK-----TSPAGSPEGKAATPKAKPSPVSTPSPSTAKASPAQKSSEKKRESQSKPEPKPKPQAKSQSDTQVPFKRIMEGVVFVLSGFQNPFRGELREKALDMGAKYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISYKRYLMDGAESSSESEMEVDDQSEEEMSTKTPQKQERQVAIKKTPQKRDEDDEYAGSTDVDEPGGDDDESAVDTEDELQRVEKESR---QKKAAAKGTPVKDEDPYGGSTDENTDAEAEEDHP--------------IPELPDFLSGKHFFLYGKFPNNERRLLLRYIVAFNGAIEDYMTEKVQFVVTSEGWHDSFEDALMENSNLNFVKPAWIYAISERQKMLPYQPYTV 625

The following BLAST results are available for this feature:

BLAST of dna repair protein xrcc1 vs. L. salmonis genes
BLAST of dna repair protein xrcc1 vs. SwissProt
BLAST of dna repair protein xrcc1 vs. nr

BLAST of dna repair protein xrcc1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000002736	6.685e-69	38.73	supercontig:LSalAtl2s:LSalAtl2s1588:75489:77910:1 ...	[more]

BLAST of dna repair protein xrcc1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 6


Match Name	E-value	Identity	Description
gi\|317373290\|sp\|P18887.2\|XRCC1_HUMAN	3.029e-108	36.36	RecName: Full=DNA repair protein XRCC1; AltName: F...	[more]
gi\|84027730\|sp\|Q9ESZ0.2\|XRCC1_RAT	9.686e-106	36.43	RecName: Full=DNA repair protein XRCC1; AltName: F...	[more]
gi\|84028280\|sp\|Q60596.2\|XRCC1_MOUSE	1.011e-105	35.28	RecName: Full=DNA repair protein XRCC1; AltName: F...	[more]
gi\|122195550\|sp\|Q24JK4.1\|XRCC1_ARATH	1.010e-21	43.75	RecName: Full=DNA-repair protein XRCC1; Short=AtXR...	[more]
gi\|81870458\|sp\|O54935.1\|XRCC1_CRIGR	1.040e-15	30.49	RecName: Full=DNA repair protein XRCC1; AltName: F...	[more]
gi\|74722933\|sp\|Q6ZNB5.1\|TRC2L_HUMAN	6.045e-15	39.82	PUTATIVE PSEUDOGENE: RecName: Full=Putative short ...	[more]

BLAST of dna repair protein xrcc1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1168972220\|ref\|XP_020445870.1\|	2.248e-124	37.92	DNA repair protein XRCC1 [Monopterus albus]	[more]
gi\|926614441\|ref\|XP_013772266.1\|	4.716e-123	36.35	DNA repair protein XRCC1-like [Limulus polyphemus]...	[more]
gi\|1025440455\|ref\|XP_016527855.1\|	1.010e-118	36.66	PREDICTED: DNA repair protein XRCC1 isoform X2 [Po...	[more]
gi\|1079771075\|ref\|XP_018555359.1\|	2.941e-118	37.42	PREDICTED: DNA repair protein XRCC1 [Lates calcari...	[more]
gi\|1188086442\|ref\|XP_020789306.1\|	4.700e-118	37.33	DNA repair protein XRCC1 [Boleophthalmus pectiniro...	[more]
gi\|961805193\|ref\|XP_014909097.1\|	4.922e-118	36.50	PREDICTED: DNA repair protein XRCC1 [Poecilia lati...	[more]
gi\|1242801011\|ref\|XP_022341040.1\|	4.958e-118	38.87	DNA repair protein XRCC1-like [Crassostrea virgini...	[more]
gi\|617405946\|ref\|XP_007553865.1\|	5.843e-118	36.45	PREDICTED: DNA repair protein XRCC1 isoform X1 [Po...	[more]
gi\|1009587833\|ref\|XP_015923169.1\|	1.361e-117	36.19	DNA repair protein XRCC1 isoform X1 [Parasteatoda ...	[more]
gi\|1228993159\|ref\|XP_022061200.1\|	6.114e-117	35.79	DNA repair protein XRCC1 [Acanthochromis polyacant...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1412_size42778	supercontig	scaffold1412_size42778:10918..12714 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold1412_size42778-processed-gene-0.4-mRNA-1	snap_masked-scaffold1412_size42778-processed-gene-0.4-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1412_size42778:10918..12714-

gene from alignment at scaffold1412_size42778:10918..12714-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold1412_size42778-processed-gene-0.4 ID=snap_masked-scaffold1412_size42778-processed-gene-0.4|Name=dna repair protein xrcc1|organism=Tigriopus kingsejongensis|type=gene|length=1797bp|location=Sequence derived from alignment at scaffold1412_size42778:10918..12714- (Tigriopus kingsejongensis)
ATGCCCGAGATCAGGATTGCTCATGTGGTGTCCTTCTCGTCGGAGGATCC
TGTGTTCAAGGCTGACAACCTGTTGCTGAACGATGGGAAGAAAAAGTGGC
GCAGTCAGGAGCCGGGCGAGAAGCGCGTGTGGGTCATCTTGCAGCTGGAG
AAGGCCTCGCACATCGACCACATCGACATTGGCAACGATGGCTCGGCCTT
CGTCGAAGTTCAGGTGGGGCGGACACAGGATGGGCAAGATTCCGATGGAT
TCCGCTCCTTGCTCGTGGCCTCTTCCTTCATGTCCCCTCTGGAGAGTCGA
AACGAGGAGAACCAATGCCGGGTGAGGATGTTCGGGCGAGAGACCCTCAA
CCAAGGGCTGGTCAAGGAGCGATGGGATCGGGTGCGGGTCGTGTGCACGC
AGCCCTTCAACAAACAAGTCAAATACGGCATCTCCTTCATTACTTTGAAG
TCCTTTCAGGATTCCAAAGCTAGTAATGGGGGCGAGAAGGTCGCGACCAA
ATTAGGGGCCTTCACGCTCAAGCCCGAGGACGACTCTAATTTGAACGTGT
CCGTGGGATCGTGGTTCAGTAAAAAACAGGACCCAAAGCGGACCTCGCTC
GTGGGGGACATGAAGTCGAATCAGACTCTAGCCTCGTTGGCATTGGCCAG
CTCACAGGTCGAAAAGGCCGGGATCAAAGGCGGTGTAGCCTCTCAACCCC
CCAAAGCCGCCTTCTACCAACTCCAAGATCGACCCTCGCCCAAGGCTGCG
GGACGGCCTCCACCTCAAAAGCTGCCCAGACGCGACGTGATGCCCGGCGA
GAGTCCTCCGAGGCCAGCCAGGAAGCCTCGCGTCTCCCAATCAACGCCCT
CGTCGACCGCCACTAAGTCATCTCGGCCACCCAAGAACACGCCCAAGGCC
AGCCCAAAGGCCATGCGACCCTTTAAACGGCTCCTAGAAGGCGTGATTTT
CACCATTTCGGGCTATCAAAATCCTCTTCGTGGCGAATTGAGACAAAAAG
CACTCACCATGGGCGCCAACTACCGATCTGATTGGTCCTCTGACTGCTCC
CATTTGATTTGCGCTTTTGCTAACACGCCAAAGTTCAATCAGGTGAGAGG
GAAAGGGAAAATCGTTAAGAAAGATTGGGTTTTGGATTGCCATGCCGATC
GGAAACGATATCCCTGGCGGCGATTCTGTCTTGATCCCAGAGATAAGGGA
GTGGAGAGCGAGGAGGAAGTTTGGGACGAGTCGCTAGTGCCCGCAGCTTC
CGGCGAGGCTATGGACACCGACGAGGAGATCGAACAGGTCAGTCGGGATC
TAGATACGGATGAGGAAATCGAGCAGGTCCGGAAACAGACAAGCATACAA
GGCAATGAAAAGCAAGACACAAGCAGTGCCCCTGACGATCGGGAGACTGA
CCTCGAGGAGGACTCGGATGCGGTCTATGATGCTGACACGGACGTGGATG
AGCCGGCGGGAGAAAACGGTACGCACTCAGACAGTCTCGACAAGGATTTT
CCGCCTCTGCCCAATTTTTTGAGCAACACACATTTCTTCTTCTTCGGATT
GTTTGACAAGGCCGAGAGGCGGTTGCTTACCCGCGAAGTGGTGGCCTCAG
AAGGTCAAGTCCATGCCTACTTGGACAAGTCGGTCGACTTTGTCGTCACC
CGAGCCAAGTGGGATTGTGAATTCGATCAAGCCCTGGAGGACAATTCCGC
CTTACATTTTGTCACGCCAGACTTTGTTCACCAATGCTGGAGATCGAAAG
AGCTGATCAGCCCAAAGAAATATCTCATTTCCAAAGCCTCTGAATAG

Synonyms

The feature 'dna repair protein xrcc1' has the following synonyms


Synonym
Tk01221

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