dna-directed rna polymerase iii subunit rpc2, snap_masked-scaffold190_size271632-processed-gene-1.0 (gene) Tigriopus kingsejongensis

Overview


Name	dna-directed rna polymerase iii subunit rpc2
Unique Name	snap_masked-scaffold190_size271632-processed-gene-1.0
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. L. salmonis genes
Match: EMLSAG00000011645 (supercontig:LSalAtl2s:LSalAtl2s80:361178:365798:1 gene:EMLSAG00000011645 transcript:EMLSAT00000011645 description:"augustus_masked-LSalAtl2s80-processed-gene-3.3")

HSP 1 Score: 1191.41 bits (3081), Expect = 0.000e+0
Identity = 575/715 (80.42%), Postives = 637/715 (89.09%), Query Frame = 0

Query:  434 MERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSG--GQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDM-TASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNP-------METQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKYCD 1138
            MER GVTQVLSRLSYISALGMMTRVNS FEK+RKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTE+EE P+ R+ FN+G ED+ LLSG EL +  I+ +FLNG ILGVVKN+ K +R+F+  RR GFI+ FVSIY HH TR VYIS+DGGRLCRPYIIV    G   V +EHI  L   +L FDDF+   L+EYLDVNEEN SNIALYE D+   +TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIA NQRNRIDTL+YNLVYPMRPMVKSRTIELI+FE++PAGQNA+VAVMSYSGYDIEDAI+LN+ASLDRGYGRCLVYRN K +LKRYANQT+D++MGPLVDAET+K + KHD+LD DGI SPG++V N+QVLVNK +P +TR D L P       +    +QP+YR+ P+ YKGP+ S++E+ M+SSNADDA+LIK+LLRQTRRPELGDKFSSRHGQKGVTGLIV+QEDMPF + G+CPDMIMNPHGFPSRMTVGKLMELLGGKAG+LEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKD+LTSGITGEPLQAYIY+GPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGR+R+GGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCN CG LGYSGWC NCKSS SVSSIRIPYACKLLFQELQ+MNIVPRLKL+KYCD
Sbjct:    1 MERIGVTQVLSRLSYISALGMMTRVNSLFEKSRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTETEEEPVARMAFNIGAEDLSLLSGXELXDSSIYXIFLNGNILGVVKNHLKFLRVFKMLRRKGFISTFVSIYSHHKTRTVYISSDGGRLCRPYIIVHSKTGIPKVTDEHIAALKKEELKFDDFINLSLIEYLDVNEENVSNIALYEKDIEVGTTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIAFNQRNRIDTLMYNLVYPMRPMVKSRTIELIHFEDLPAGQNAMVAVMSYSGYDIEDAIVLNKASLDRGYGRCLVYRNSKTVLKRYANQTFDKLMGPLVDAETKKPLLKHDILDNDGIASPGLQVSNKQVLVNKYIPTVTR-DVLKPDSSGEDSISRAGKQPDYREVPSTYKGPVSSYVEKAMVSSNADDAYLIKLLLRQTRRPELGDKFSSRHGQKGVTGLIVEQEDMPFTDMGLCPDMIMNPHGFPSRMTVGKLMELLGGKAGILEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDILTSGITGEPLQAYIYYGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRARDGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNQCGXLGYSGWCHNCKSSGSVSSIRIPYACKLLFQELQSMNIVPRLKLDKYCD 714

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. L. salmonis genes
Match: EMLSAG00000010026 (supercontig:LSalAtl2s:LSalAtl2s65:53833:57281:-1 gene:EMLSAG00000010026 transcript:EMLSAT00000010026 description:"maker-LSalAtl2s65-augustus-gene-0.29")

HSP 1 Score: 658.677 bits (1698), Expect = 0.000e+0
Identity = 391/1075 (36.37%), Postives = 612/1075 (56.93%), Query Frame = 0

Query:   30 WQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVI-----------SSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIV-------EVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHN----------SMEKDIPIGVVFKAMGVVSDQEIVQMV---GTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNW-TIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARR-MGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMA---GQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTAST---------THLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQK-AILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGS-KVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMER 1057
            W ++ A+   +GLVRQ +DSF+ FI  +++ IV    ++              A P + LK+  +++  P   E  G      P+E RLR+  +    T+   Y +  ++I          PIMLRS  C+L+G     L ++NECP DPGGYFI  G EKV++ QE+++ N + V          +T   +C   SS   +    N+ T+GG+   K             ++++IPI +VF+A+G V+ ++I++ +     +  +M  +  SL+E     +  QN AL F+  +  A+   +  K+  I   +++L + +L HV V  +    KA ++  MV R++ +      +DDRD+YGNKRL+LAG LL+ LF  LF+ L  E++  A + I   K   F++   I+  +I+ GL+ ++++GNW   K+    R GV+QVL+RL++ S L  + R+NS   +  K++ PR L  + WGM+CP++TPEG + GLVKNLALM +++  +  +PI+       +E++  ++   +S+     +F+NG  +G+ ++  +L+   R  RR M  IN  VS+      R + I  D GR+CRP +IV   + L+ ++HI++L         + D +  G+VEY+D  EE  + IA     +  +          TH EI P  +LGVCA +IP+P HNQSPRNTYQ AMGKQAMG    N   R+DTL + L YP +P+V +R+++ + F E+PAG N+IVA+ +Y+GY+ ED++ILN +++DRG+ R +  R+ K + LKR  N   +    P  D     +   +D LD DGI +PG++V    V++ K+   IT  +  + +E + ++   RD+    +      +++VMI+ N+D    +KI +R  R P++GDKF+SRHGQKG  G+  +QEDMPF  +GI PD+I+NPH  PSRMT+G L+E L GK G  +G+    T F  +  V  IS+ L    +  +G +V+ +G TG  + A I+ GP YYQ+LKHMV DK+H RARGP  +L RQP EGR+R+GGLR GEMER
Sbjct:   28 WIVISAYFEEKGLVRQQLDSFDEFIQMNVQRIVEDFPQIDLQGEPNYSHGEMEAPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNXXHLLCSTL-CGYYQDYRKI----------PIMLRSTYCLLSGMTDRDLTELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSVKDSKYAYKTEIRSCLEHSSRPTSTLWVNMLTRGGQNIKKSAIGQRIVGILPYIKQEIPIMIVFRALGFVAXRDILEHIIYDFDDPELMEMVKPSLDEA--FVIQEQNIALNFIGTR-GAQPGVTREKR--IKYAKEILQKEMLPHVGVSDFCETRKAYFLGYMVHRLLLAALGRKELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEMRMYAQKFID--KGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQSRAGVSQVLNRLTFASTLSHLRRINSPIGRDGKLAKPRQLHNTLWGMICPAETPEGGAVGLVKNLALMAYVSVGNTPSPILEFLEEWSMENLEEIAPSSISDAT--KIFVNGCWVGIHRDPEQLMTTLRKLRRQMDIINAEVSMIRDIRDREIRIYTDAGRICRPLLIVEDCRLLMNKQHIEMLKEREYNNYQWQDLVASGVVEYIDTMEEETTMIATSPESLQPAEDGTFYCQTWTHCEIHPAMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMDYLRFSELPAGINSIVAIATYTGYNQEDSVILNSSAVDRGFFRSVFMRSYKDSELKR--NDQEECFEKPSRDTCQGMRNAIYDKLDDDGIIAPGLRVSGDDVVIGKT---ITLQENDDELEGKTQRFTKRDSSTFLRNSETGIVDQVMITLNSDANKFVKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGISPDIIINPHAIPSRMTIGHLIECLQGKLGANKGEVGDATPFNDAVDVQKISKLLSEYNYQPRGNEVMYNGHTGRKMNAQIFLGPTYYQRLKHMVDDKIHSRARGPLQILVRQPMEGRARDGGLRFGEMER 1077

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. L. salmonis genes
Match: EMLSAG00000008556 (supercontig:LSalAtl2s:LSalAtl2s527:259402:264875:-1 gene:EMLSAG00000008556 transcript:EMLSAT00000008556 description:"maker-LSalAtl2s527-augustus-gene-1.51")

HSP 1 Score: 324.709 bits (831), Expect = 1.506e-92
Identity = 241/747 (32.26%), Postives = 359/747 (48.06%), Query Frame = 0

Query:  434 MERQGVT---QVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEA---PIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKL------IRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCR---PYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALY-EVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYA--NQTYDR--VMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSN---ADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSK------VSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCG--------------LLGYSG-----WCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLK 1132
            M+  G++   + ++R+ Y+S    + R    F +  + +  R+L P  WG +CP  TP+G  CGL+ +  L T + T + +A   P V     V   D  +  G   S    ++VFLNG ++G V   S+       +RI +  +  G                V I  D     +   P + +  G + ++   I L        DD      VE++   E+   NI +  E      TTH E+ P T L   A LIP P  NQSPRN YQC MGKQ M T      +  +T +Y L  P  P  +    + I  +E P G NAIVAV+SY+GYD+EDA+I+N++S +RG+    +Y+ Q   LK  +   ++Y          +    + + KH  LDADG+  PG+ + N              GD   P+     + +       Y+G   +F++ V I SN     +   + I  R  R   +GDKF+SR GQKG+       ED+P+ E GI PD+I NPHGFPSRMT+  ++E + GK+G   G  H  T F  S+      +    ++L   G+NY G + + SG  G  ++A I+ G ++YQ+L+HMV DK   R++G    +TRQP +GR R GG+R GEMERD L+++G+  LL +RL   SD   V +C  CG               LG +       C  CK +  VS + +PY    L  +L  +NI  RL+
Sbjct:  779 MQNSGISIMAENINRMRYMSHFRAIHR--GSFFQEMRTTEVRALLPDAWGFICPVHTPDGSPCGLLNHFTLNTEVITHAPDASKVPEVLYDLGVVSVDEGIQGGNGKSVTPSYSVFLNGILMGYVNGTSQTKEIADKLRILKVRKERGV---------PRVMEIVLIPYDDDSKLQGQYPGLFLFTGPARMMRPVINLXA------DD------VEFIGTFEQVFLNICIQPEEAYPGVTTHRELRPTTFLSNLASLIPLPDFNQSPRNMYQCQMGKQTMATPIHTWHSNSETKIYRLQTPTSPFFRPVHYDYIKLDEFPMGTNAIVAVISYTGYDMEDAMIINKSSFERGFCSGSIYKAQFIDLKEISAGRKSYRNTDTCDLYFERNPNRDLSKH--LDADGLPYPGVPLFN--------------GD---PLYCYRSRIDDSYVLKKYEGNELAFVDSVKILSNDLGTGELTRVSICYRIPRNASVGDKFASRAGQKGICSRKWITEDLPWTESGIHPDIIFNPHGFPSRMTIAMMVECMAGKSGAAHGIVHDATPFTFSEDRNNDAIDFFGKQLESAGYNYYGTETMYSGTDGVEMKAEIFFGVIHYQRLRHMVSDKFQVRSQGAIDQVTRQPIKGRRRGGGVRFGEMERDALLSHGSMFLLQDRLFHGSDKTRVQICTRCGSLLSPRVSVSKKNTALGGAAVPGKXTCVICKKTDQVSELDLPYIFLHLVAQLAGVNIKVRLE 1483

HSP 2 Score: 58.9214 bits (141), Expect = 7.966e-9
Identity = 53/194 (27.32%), Postives = 85/194 (43.81%), Query Frame = 0

Query:    6 PARPSWAEGSAAKLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKV-ISSADPAFYLKYLDVHVGPPQIEE-SFGV-SRATTPHECRLRDITYSAPITVDIEYTRG---QQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMI 193
            P +PS        L SP      +W +  A  +   L   H++SFN+     L+ +++  E V     D    +  +D    PP+  E + G+      P E R R  TY A   + +  T     Q  I+ ++L  G +PIM++S  C L+     +L +  E P + GGYF+  G E++I +     KN  I
Sbjct:  287 PKKPSLK-----NLTSP------EWSIPSANPATEFLGTAHVESFNFATGPGLEMMIQDLEPVEFLVNDQRLSIDIVDAEFRPPEAPEGALGIRCPLVYPGEARQRGTTYKACAIIKVRITLNGVLQPWILERSL--GYLPIMVKSKICNLSNMSPKELVEKGEHPSEWGGYFVIGGHERLIRMLISTRKNXPI 467

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Match: gi|29428029|sp|Q9NW08.2|RPC2_HUMAN (RecName: Full=DNA-directed RNA polymerase III subunit RPC2; Short=RNA polymerase III subunit C2; AltName: Full=C128; AltName: Full=DNA-directed RNA polymerase III 127.6 kDa polypeptide; AltName: Full=DNA-directed RNA polymerase III subunit B)

HSP 1 Score: 1729.15 bits (4477), Expect = 0.000e+0
Identity = 811/1122 (72.28%), Postives = 956/1122 (85.20%), Query Frame = 0

Query:   18 KLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSG-PKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQ--PRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKY 1136
            +LA+PI  VE+KW+L+PAFL V+GLV+QHIDSFNYFI  ++K I++ANEKV S ADP +YLKYL+++VG P +EESF V+R  +PHECRLRD+TYSAPITVDIEYTRG QRIIR ALPIG+MPIMLRS  C+L G+  A+ AK+NECP DPGGYFI KG EKVILIQEQLSKNR+IVE DR G +   VTSSTH  KSRTN+  K GR+YL+HN++ +DIPI ++FKAMGV SDQEIVQM+GTE+ +M A   SLEEC +A +FTQ QALK++  K++ ++ + G PKK+ I++ R++LA T+L HVPV+ +NF+ K IY A+MVRRVI +Q D   VDDRDYYGNKRLELAG LLSLLFEDLFK+ N E+K+IAD+ IP+ +AAQFD+VKH+R D IT G+ NAIS+GNW++KRF+M+RQGVTQVLSRLSYISALGMMTR++SQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE+CGLVKNLALMTHITT+ E+ PIV+L  N+GVED++LL GEELS P +F VFLNG ILGV++++ KL+  FR  RR G+IN FVSI  + T RCVYIS+DGGRLCRPYIIV   +  V  +H++ L  G   F+DFL + LVEYLDVNEEND NIALYE  +   TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTI  NQRNRIDTL+Y L YP +PMVK++TIELI FE++PAGQNA VAVMSYSGYDIEDA++LN+ASLDRG+GRCLVY+N K  LKRY NQT+D+VMGP++DA T+K IW+H++LDADGI SPG KV+N+QVLVNKSMP +T+     P+E    P+QP+Y+D P  YKG   S+IE+VMISSNA+DAFLIK+LLRQTRRPE+GDKFSSRHGQKGV GLIV QEDMPF + GICPD+IMNPHGFPSRMTVGKL+ELL GKAGVL+G+FHYGTAFGGSKV D+ E+LVR+G+NY GKD +TSGITGEPL+AYIY GPVYYQKLKHMVLDKMH RARGPRAVLTRQPTEGRSR+GGLRLGEMERDCLI YGASMLL+ERLMISSDAF+VDVC  CGLLGYSGWC  CKSS  VSS+RIPYACKLLFQELQ+MNI+PRLKL KY
Sbjct:   15 QLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQ----IPLEGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSKY 1131

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Match: gi|51704303|sp|P59470.2|RPC2_MOUSE (RecName: Full=DNA-directed RNA polymerase III subunit RPC2; Short=RNA polymerase III subunit C2; AltName: Full=C128; AltName: Full=DNA-directed RNA polymerase III 127.6 kDa polypeptide; AltName: Full=DNA-directed RNA polymerase III subunit B)

HSP 1 Score: 1725.29 bits (4467), Expect = 0.000e+0
Identity = 809/1122 (72.10%), Postives = 956/1122 (85.20%), Query Frame = 0

Query:   18 KLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSG-PKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQ--PRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKY 1136
            +L +PI  VE+KW+L+PAFL V+GLV+QHIDSFNYFI  ++K I++ANEKV S ADP +YLKYL+++VG P +EESF V+R  +PHECRLRD+TYSAPITVDIEYTRG QRIIR ALPIG+MPIMLRS  C+L G+  A+ AK+NECP DPGGYFI KG EKVILIQEQLSKNR+IVE DR G +   VTSSTH  KSRTN+  K GR+YL+HN++ +DIPI ++FKAMGV SDQEIVQM+GTE+ +M A   SLEEC +A +FTQ QALK++  K++ ++ + G PKK+ I++ R++LA T+L HVPV+ +NF+ K IY A+MVRRVI +Q D   VDDRDYYGNKRLELAG LLSLLFEDLFK+ N E+K+IAD+ IP+ +AAQFD+VKH+R D IT G+ NAIS+GNW++KRF+M+RQGVTQVLSRLSYISALGMMTR++SQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE+CGLVKNLALMTHITT+ E+ PI++L  N+GVED++LL GEELS P +F VFLNG ILGV++++ KL+  FR  RR G+IN FVSI  + T RCVYIS+DGGRLCRPYIIV   +  V  +H++ L  G   F+DFL + LVEYLDVNEEND NIALYE  +   TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTI  NQRNRIDTL+Y L YP +PMVK++TIELI+FE++PAGQNA VAVMSYSGYDIEDA++LN+ASLDRG+GRCLVY+N K  LKRY NQT+D+VMGP++DA T+K IW+H++LDADGI SPG KV+N+QVLVNKSMP +T+     P+E    P+QP+Y+D P  YKG   S+IE+VMISSNA+DAFLIK+LLRQTRRPE+GDKFSSRHGQKGV GLIV QEDMPF + GICPD+IMNPHGFPSRMTVGKL+ELL GKAGVL+G+FHYGTAFGGSKV D+ E+LVR+G+NY GKD +TSGITGEPL+AYIY GPVYYQKLKHMVLDKMH RARGPRAVLTRQPTEGRSR+GGLRLGEMERDCLI YGASMLL+ERLMISSDAF+VDVC  CGLLGYSGWC  CKSS  VSS+RIPYACKLLFQELQ+MNI+PRLKL KY
Sbjct:   15 QLTAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVSTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQ----IPLEGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLAKY 1131

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Match: gi|78099797|sp|P25167.2|RPC2_DROME (RecName: Full=DNA-directed RNA polymerase III subunit RPC2; Short=RNA polymerase III subunit C2; AltName: Full=DNA-directed RNA polymerase III 128 kDa polypeptide; Short=C128)

HSP 1 Score: 1647.48 bits (4265), Expect = 0.000e+0
Identity = 772/1136 (67.96%), Postives = 919/1136 (80.90%), Query Frame = 0

Query:    1 MGEAGPARPSWAEGSAAKLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKY 1136
            MG+      +W  G +   + PI  + +KW+LVPAFL V+GLV+QHIDSFN+FI  D+K IV+ANE V S ADP FYLKYLDV VG P I++ F +++ATTPHECRLRD TYSAPITVDIEYTRG QRI R  L IG+MP+MLR   C L G+   +L+K+NECP DPGGYF+ +GQEKVILIQEQLS N+M+ E D  G + CQVTSSTH  KSRT V +K G+YYLKHNSM  DIPI V+FKA+GVVSDQEI  ++G +        ASL +     VFTQ +AL++M +K+  ++F S   K+P ++ R++L  T+LAHVPV  +N +MKAIY+++MVRRV+ ++ D ++ DDRDYYGNKRLELAGSLLS++FEDLFKR+NWELK IAD+NIP+VKAAQFD+VKH+R   IT GLE+AISSGNWTIKRF+MER GVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE+CGLVKNLALMTHITTE EE P++ + FN GVEDI  +SG  ++NP +F VF+NG +LG+  N+  L+R  R  RR G +  +VS++  +T RC+YI  DGGRLCRPY+IV   + LV + H+  L  G   FDDFL  GL+EYLDVNEENDS IA  E  +   TTHLEIEPFTLLGVCAGL+PYPHHNQSPRNTYQCAMGKQAMG I  NQ+NRID+L+YNLVYP  PMVKS+TIEL NF+++PAGQNA VAVMSYSGYDIEDA+ILN+AS+DRGYGRCLVY+N K  +KRYANQT+DR+MGP+ DA T K I+KHDVLD DGI +PG +V N+Q+++NK MPA+T   ++NP++ Q  Q  Y   P  YKGP PS+IERVM+S+NA++ FLIKILLRQTR PE+GDKFSSRHGQKGVTGLIV+QEDMPFN+ GICPDMIMNPHGFPSRMTVGK +ELLGGKAG+LEGKFHYGTAFGGSKV DI  EL R+GFNY GKD   SGITG PL+AYIY GPVYYQKLKHMV DKMH RARGP+AVLTRQPT+GRSREGGLRLGEMERDCLI+YGASML++ERLMISSDAF+VDVC  CG + Y  WC  C+SS +VS I +PYACKLLFQEL +MN+VP++ LE Y
Sbjct:    6 MGDHNVEATTWDPGDSKDWSVPIKPLTEKWKLVPAFLQVKGLVKQHIDSFNHFINVDIKKIVKANELVTSGADPLFYLKYLDVRVGKPDIDDGFNITKATTPHECRLRDTTYSAPITVDIEYTRGTQRIKRNNLLIGRMPLMLRCSNCALTGKSEFELSKLNECPLDPGGYFVVRGQEKVILIQEQLSWNKMLTE-DFNGVVQCQVTSSTHEKKSRTLVLSKHGKYYLKHNSMTDDIPIVVIFKALGVVSDQEIQSLIGIDSKSQNRFGASLIDAYNLKVFTQQRALEYMGSKLVVKRFQSATTKTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKRLELAGSLLSMMFEDLFKRMNWELKTIADKNIPKVKAAQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTEVEERPVMIVAFNAGVEDIREVSGNPINNPNVFLVFINGNVLGLTLNHKHLVRNLRYMRRKGRMGSYVSVHTSYTQRCIYIHTDGGRLCRPYVIVENRRPLVKQHHLDELNRGIRKFDDFLLDGLIEYLDVNEENDSFIAWNEDQIEDRTTHLEIEPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGMIGYNQKNRIDSLMYNLVYPHAPMVKSKTIELTNFDKLPAGQNATVAVMSYSGYDIEDALILNKASIDRGYGRCLVYKNSKCTVKRYANQTFDRIMGPMKDALTNKVIFKHDVLDTDGIVAPGEQVQNKQIMINKEMPAVT---SMNPLQGQSAQVPYTAVPISYKGPEPSYIERVMVSANAEEDFLIKILLRQTRIPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDFGICPDMIMNPHGFPSRMTVGKTLELLGGKAGLLEGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGITGTPLEAYIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDAFEVDVCRTCGRMAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILENY 1137

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Match: gi|1710663|sp|Q10233.1|RPC2_SCHPO (RecName: Full=DNA-directed RNA polymerase III subunit RPC2; Short=RNA polymerase III subunit 2; Short=RNA polymerase III subunit C2; AltName: Full=C128; AltName: Full=DNA-directed RNA polymerase III 130 kDa polypeptide; AltName: Full=RPC130)

HSP 1 Score: 1436.4 bits (3717), Expect = 0.000e+0
Identity = 684/1122 (60.96%), Postives = 857/1122 (76.38%), Query Frame = 0

Query:   18 KLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVD-RTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMV-GTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQ-FDIVKH--IRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLE 1134
            KLA P+  +EDKWQL+PAFL V+GLV+QH+DS+NYF+  DLK IV+ANEKV S  +P FYLKYLD+ VG P   ++  +  + +PHECRLRD+TY A I VDIEYTRG+Q + R+ +PIG+MP+MLRS++C+L+G++  ++A +NECP DPGGYFI KG EKVIL+QEQLSKNR+IVE + + G     VTSSTH  KS+T V TK G+ YLKHNS+  DIPI VV KAMG+ SDQEI ++V G E +     A S+EEC +  ++T  QAL+++ A++K  +     +  P ++  +VLA  VLAH+ V    F+ KA+Y+ +M RRV+ +  D   VDDRDY GNKRLELAG LL+LLFEDLFK+ N +LK   D+ + +    Q FD      +  D IT G+  A+S+GNW++KRF+MER GVT VLSRLSYISALGMMTR+ SQFEKTRKVSGPRSLQ SQ+GMLC SDTPEGE+CGLVKNLALMTHITT+ EE PI++L +  G+EDIH++SG EL +   + V+LNG ILG+ +  S  +  FR  RR G I+ F+ I+ +   R V+IS DGGR+CRP IIV  G   V  +HI+LL  G+  F+DFL++GLVEY+DVNEENDS I++YE D+T  TTHLEIEPFT+LG  AGLIPYPHHNQSPRNTYQCAMGKQA+G IA NQ  RIDTLLY +VYP +PMVK++TIELI ++++PAGQNA VA+MSYSGYDIEDA++LN++S+DRG+GRC V+     I+++Y N T+DR+  P  D ET + +WKH V++ DG+   G +V   Q+ VNK  P     +++    TQ  +  Y+ TP  YK P P +I++VM+++   D  LIK+L+RQTRRPELGDKFSSRHGQKGV G+IVQQEDMPFN+QGICPD+IMNPHGFPSRMTVGK++ELL GK GVL G   YGT FGG+KV D S  LV +G+NY GKD+LTSGITGE L+AYI+ GP+YYQKLKHMV+DKMH RARGPRAVLTRQPTEGRSR+GGLRLGEMERDCLIAYGAS LL+ERLMISSDA DVDVC  CGLLGY GWC +C+S++ V  + IPYA KLLFQEL +MNIVPRL LE
Sbjct:   39 KLADPVPTIEDKWQLLPAFLKVKGLVKQHLDSYNYFVDVDLKKIVQANEKVTSDVEPWFYLKYLDIRVGAPVRTDADAIQASISPHECRLRDLTYGANIYVDIEYTRGKQVVRRRNVPIGRMPVMLRSNKCVLSGKNEMEMAALNECPLDPGGYFIVKGTEKVILVQEQLSKNRIIVEAEPKKGLWQASVTSSTHERKSKTYVITKNGKLYLKHNSVADDIPIVVVLKAMGLQSDQEIFELVAGAEASYQDLFAPSIEECAKLNIYTAQQALEYIGARVKVNRRAGANRLPPHEEALEVLAAVVLAHINVFNLEFRPKAVYIGIMARRVLMAMVDPLQVDDRDYVGNKRLELAGQLLALLFEDLFKKFNSDLKLNIDKVLKKPHRTQEFDAYNQLTVHSDHITQGMVRALSTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRITSQFEKTRKVSGPRSLQASQFGMLCTSDTPEGEACGLVKNLALMTHITTDEEEEPIIKLAYAFGIEDIHVISGRELHSHGTYLVYLNGAILGISRYPSLFVASFRKLRRSGKISPFIGIFINTHQRAVFISTDGGRICRPLIIVQNGLPKVESKHIRLLKEGKWGFEDFLKQGLVEYVDVNEENDSLISVYERDITPDTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQLQRIDTLLYLMVYPQQPMVKTKTIELIGYDKLPAGQNATVAIMSYSGYDIEDALVLNKSSIDRGFGRCQVFHKHSVIVRKYPNGTHDRIGDPQRDPETGEVVWKHGVVEDDGLAGVGCRVQPGQIYVNKQTPTNALDNSITLGHTQTVESGYKATPMTYKAPEPGYIDKVMLTTTDSDQTLIKVLMRQTRRPELGDKFSSRHGQKGVCGVIVQQEDMPFNDQGICPDIIMNPHGFPSRMTVGKMIELLSGKVGVLRGTLEYGTCFGGTKVEDASRILVEHGYNYSGKDMLTSGITGETLEAYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMISSDACDVDVCGQCGLLGYKGWCNSCQSTREVVKMTIPYAAKLLFQELLSMNIVPRLALE 1160

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Match: gi|2507350|sp|P22276.2|RPC2_YEAST (RecName: Full=DNA-directed RNA polymerase III subunit RPC2; Short=RNA polymerase III subunit C2; AltName: Full=C128; AltName: Full=DNA-directed RNA polymerase III 130 kDa polypeptide)

HSP 1 Score: 1411.36 bits (3652), Expect = 0.000e+0
Identity = 684/1122 (60.96%), Postives = 864/1122 (77.01%), Query Frame = 0

Query:   18 KLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVD-RTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMV-GTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRV-KAAQFD--IVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLE 1134
            KL   I   +DKW L+PAFL V+GLV+QH+DSFNYF+ TDLK I++AN+ ++S  DP FYLKY+D+ VG  +   S      T PHECRLRD+TYSAPI VDIEYTRG+  I+ + + IG+MPIMLRS++CIL   D +++AK+NECP DPGGYFI  G EKVIL+QEQLSKNR+IVE D + G +   VTSSTH  KS+T V TK G+ YLKHNS+ ++IPI +V KA G++SD EI+Q+V G + +     A +LEE ++  ++TQ QAL+++ AK+K  +     K + + +  + +A TV+AH+ V   +F+ KA+Y+A+M RRV+ +  +  M+DDRDY GNKRLELAG L+SLLFEDLFK+ N + K   D+ + +  +A ++D  +  ++  + IT GL  AIS+GNW++KRF+MER GVT VLSRLSYISALGMMTR++SQFEK+RKVSGPR+LQPSQ+GMLC +DTPEGE+CGLVKNLALMTHITT+ EE PI +L + +GVEDI L+    L     + V+LNG ++G ++  +K +  FR  RR G ++ F+SIY +     V+I+ DGGR+CRP IIVS GQS V + H++ L+ G+L FDDFL+ GLVEYLDVNEENDS IALYE D+  S THLEIEPFT+LG  AGLIPYPHHNQSPRNTYQCAMGKQA+G IA NQ  RIDTLLY + YP +PMVK++TIELI+++++PAGQNA VAVMSYSGYDIEDA++LN++S+DRG+GRC   R    +LKRYAN T D + G  VD E    IW+H  L  DG+G  GMKV + Q+ +NKS+P     DA NP      Q +YR+ P +Y+GP PS I++VM+S + +D  LIK+LLRQ RRPELGDKFSSRHGQKGV G+IV+QEDMPFN+QGI PD+IMNPHGFPSRMTVGK++EL+ GKAGVL G   YGT FGGSK+ D+S+ LV  GFNY GKD+L SGITGE LQAYI+ GP+YYQKLKHMVLDKMH RARGPRAVLTRQPTEGRSR+GGLRLGEMERDC+IAYGAS LL+ERLMISSDAF+VDVC+ CGL+GYSGWCT CKS++++  + IPYA KLLFQEL +MNI PRL+LE
Sbjct:   33 KLTDEINTAQDKWHLLPAFLKVKGLVKQHLDSFNYFVDTDLKKIIKANQLILSDVDPEFYLKYVDIRVG--KKSSSSTKDYLTPPHECRLRDMTYSAPIYVDIEYTRGRNIIMHKDVEIGRMPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADEKKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQLVCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMR---RQKLTILQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGEACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHLN--YGVYLNGTLIGSIRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSDGQSRVKDIHLRKLLDGELDFDDFLKLGLVEYLDVNEENDSYIALYEKDIVPSMTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQFKRIDTLLYLMTYPQQPMVKTKTIELIDYDKLPAGQNATVAVMSYSGYDIEDALVLNKSSIDRGFGRCETRRKTTTVLKRYANHTQDIIGGMRVD-ENGDPIWQHQSLGPDGLGEVGMKVQSGQIYINKSVPT-NSADAPNPNNVNV-QTQYREAPVIYRGPEPSHIDQVMMSVSDNDQALIKVLLRQNRRPELGDKFSSRHGQKGVCGIIVKQEDMPFNDQGIVPDIIMNPHGFPSRMTVGKMIELISGKAGVLNGTLEYGTCFGGSKLEDMSKILVDQGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISSDAFEVDVCDKCGLMGYSGWCTTCKSAENIIKMTIPYAAKLLFQELLSMNIAPRLRLE 1144

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Match: gi|939204604|sp|F4KD38.1|NRPC2_ARATH (RecName: Full=DNA-directed RNA polymerase III subunit 2; AltName: Full=DNA-directed RNA polymerase III subunit RPC2; Short=DNA polymerase I subunit C2; AltName: Full=Nuclear RNA polymerase C2)

HSP 1 Score: 1266.14 bits (3275), Expect = 0.000e+0
Identity = 626/1148 (54.53%), Postives = 810/1148 (70.56%), Query Frame = 0

Query:   18 KLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQ----RIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPR-VKAAQFDIVKHIRCDL---ITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMT-----------ASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGP--IPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFG-----GSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGW------CTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKL 1133
            KL++PI +  DK+QLVP FL VRGLV+QH+DSFNYFI   +  IV+AN ++ S+ DP+ YL++  V VG P I     V     PH CRL D+TY+API V+IEY  G      +  +  + IG+MPIMLRS RC+L+G+D  +LA++ ECP DPGGYFI KG EKV+LIQEQLSKNR+I++ D+ G I   VTSST  TKS+T +  +  + YL  +   K IPI +V KAMG+ SDQEIVQMVG +     ++  S+EEC    V TQ QAL ++ AK+K   + + P+K        +L +  LAHVPV   NF+ K  Y+ +M+RR+IE+  +   +DD+DY GNKRLEL+G L+SLLFEDLFK +  E  +  D  + + ++A++FD  + +  D    I++GLE  +S+GN+ IKRFRM R+G+TQVL+RLS+I ++G +T+++ QFEK+RKVSGPRSLQPSQWGMLCP DTPEGESCGLVKNLALMTH+TT+ EE P+V + + +GV D+ +LS EEL  P  F V LNG ILG            R  RR G I  FVS++ +    CVY+++D GR+CRP +I   G S V + H+K L  G   FDDF+R GL+EYLDVNEEN++ IALYE D T           A TTH+EIEPFT+LGV AGLIPYPHHNQSPRNTYQCAMGKQAMG IA NQ NR+DTLLY LVYP RP++ +RTIEL+ ++++ AGQNA VAVMS+SGYDIEDAI++N++SLDRG+GRC+V +   A+ ++Y N T DR++ P     T     K  +LD DG+ +PG  +    + +NK +P     D +    +     +YR     +KGP      ++RV + S+      IK ++R TRRPELGDKFSSRHGQKGV G+I+QQED PF+E GICPD+IMNPHGFPSRMTVGK++ELLG KAGV  G+FHYG+AFG       KV  IS  LV  GF+Y GKD+L SGI+GEP++AYI+ GP+YYQKLKHMVLDKMH R  GPR ++TRQPTEG+S+ GGLR+GEMERDCLIAYGASML+ ERLMISSD F+V VC  CGLLGY  +      CT CK+  +++++++PYACKLLFQELQ+MN+VPRLKL
Sbjct:   21 KLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSRITSTVDPSIYLRFKKVRVGEPSIINVNTVEN-INPHMCRLADMTYAAPIFVNIEYVHGSHGNKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPPEKD--GRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDGTTELDEGAEAAKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMKKIVAMSQKYDNCTADRILIP---QRTGPDAEKMQILDDDGLATPGEIIRPNDIYINKQVPV----DTVTKFTSALSDSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKL 1158

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Match: gi|74852634|sp|Q54IZ9.1|RPC2_DICDI (RecName: Full=DNA-directed RNA polymerase III subunit rpc2; Short=RNA polymerase III subunit C2; AltName: Full=DNA-directed RNA polymerase III subunit B; Contains: RecName: Full=Ddi rpc2 intein)

HSP 1 Score: 803.512 bits (2074), Expect = 0.000e+0
Identity = 383/642 (59.66%), Postives = 482/642 (75.08%), Query Frame = 0

Query:  492 SCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKL 1133
            +CGLVKN ALM+H+TT+  E P++RL +N+GV+DI L++GEEL++   + V LNG I+G+  +    +   R  RR G I  FVSI  +   + + ++ DGGRLCRP IIV   +  + +EHI+ L  G   FDDF+R+G++EYLDVNEENDS +A  E  +   TTHLEIEPFT+LG  AGLIPYPHHNQSPRNTYQCAMGKQA+G IA NQ  RIDTLLY LV+  RP+ ++RTI+L+N+ ++PAG NA VAVMSYSGYDIEDA+++N+ASLDRG+GRC+V + Q   +K++ N T DR+  P  +   Q    K+ +LD+DGI  PG      Q+LVNK  P  T     NP E  P    Y+ +   YK   P+FI++V+++S  D+  LIK+L+R TRRPELGDKFSSRHGQKGV G+IV+QEDMPF++ GICPD+IMNPHGFPSRMT+GK++ELL GKAGVL GKF +GT FGG +V +IS+ L+  GF+Y GKD +TSG+TGEPL  +I+ GP++YQKLKHMV+DKMH RARGP   LTRQPTEGR+R GGLRLGEMERDCLI YGAS L++ERLMISSD F V  C  CG LGY G+C  CKSS  +S+I+IPYACKLLFQELQAMNIVPRLKL
Sbjct:  969 NCGLVKNFALMSHVTTDDSEGPLLRLAYNLGVQDILLVTGEELNSRNAYLVLLNGQIIGIHNSPDYFVTTLRKMRRAGRIREFVSICKNKAQQTISVACDGGRLCRPVIIVDDQRPRLTQEHIEDLKDGLRTFDDFIREGIIEYLDVNEENDSFLAWREAAIQPWTTHLEIEPFTMLGCVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQLTRIDTLLYLLVHTQRPLCQTRTIDLLNWYKLPAGHNATVAVMSYSGYDIEDALVMNKASLDRGFGRCIVLKKQVTSIKKHGNDTSDRIFPPTPNDLRQP---KYGLLDSDGIAKPGELAQKGQILVNKYSPLNTIDATPNP-ELIP-DSAYKSSYMGYKYDNPAFIDKVLLTSGDDEQLLIKMLMRSTRRPELGDKFSSRHGQKGVCGIIVKQEDMPFSDLGICPDIIMNPHGFPSRMTIGKMIELLAGKAGVLSGKFGFGTCFGGDRVENISKVLISKGFSYGGKDYVTSGVTGEPLACFIFFGPIFYQKLKHMVMDKMHARARGPTVTLTRQPTEGRARGGGLRLGEMERDCLIGYGASALIMERLMISSDRFTVYACKNCGFLGYEGYCQYCKSSVDISTIQIPYACKLLFQELQAMNIVPRLKL 1605

HSP 2 Score: 568.926 bits (1465), Expect = 2.410e-178
Identity = 269/480 (56.04%), Postives = 354/480 (73.75%), Query Frame = 0

Query:   17 AKLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKA--RKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRV-KAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESC 493
            +KL   I  VE+KW+LVPAF+  RGLV+QHIDSFN+FI  ++K IV+ANE++ +  DP++++++ D++VG P   E    S   TP  CRLRD+TYSAPI V+IEYTR +Q I ++ + IG +PIMLRS  C+L+ +   Q+A + ECP DPGGYFI +GQEKVIL  EQLSKNR+I+E+D  G  +  VTSSTH  KSRT VT K  + YLKHN+  +DIP+ +V K MGV +DQE+ Q+VG++D  + A+  SLEEC +  V T  QAL ++ +++K   R +    KK+  ++ RD+LA  VL HVPVR YNF++K IY++LM+RR+I +  D S +DD+DYYGNKR+EL+G L+SLLFED FK+   ELK+  D+ I +  +A   D+ K IR D IT G  +AISSG W +KRFRMER GV+QVLSRLSYIS +GMMTR+ SQFEKTRKV+GPRSLQPSQWGMLCPSDTPEGE+C
Sbjct:   27 SKLTDDIKPVEEKWKLVPAFMKCRGLVKQHIDSFNFFINVEMKKIVKANERLTAENDPSYFVRFTDINVGSPTSTEDNLDSVQLTPQRCRLRDMTYSAPIFVNIEYTRNKQIISKRDVHIGNIPIMLRSSNCVLSKKTPEQMAALGECPMDPGGYFIVRGQEKVILNHEQLSKNRIIIEMDSKGLPSASVTSSTHERKSRTGVTLKNEKLYLKHNTFGEDIPVAIVLKGMGVETDQEMAQLVGSDDVFLNAITPSLEECQKCGVHTAAQALDYLGSRIKVFRRPYGVQNKKTKSEEARDILAGVVLNHVPVRRYNFRLKVIYLSLMIRRIIMASKDKSCLDDKDYYGNKRIELSGQLISLLFEDCFKKFQSELKKSVDQAIAKANRAENLDLPKLIRTDTITNGFTHAISSGQWNLKRFRMERSGVSQVLSRLSYISCMGMMTRIQSQFEKTRKVAGPRSLQPSQWGMLCPSDTPEGEAC 506

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Match: gi|51702025|sp|Q8SR75.1|RPB2_ENCCU (RecName: Full=DNA-directed RNA polymerase II subunit RPB2; Short=RNA polymerase II subunit 2; Short=RNA polymerase II subunit B2)

HSP 1 Score: 778.859 bits (2010), Expect = 0.000e+0
Identity = 432/1153 (37.47%), Postives = 669/1153 (58.02%), Query Frame = 0

Query:   27 EDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPA--------FYLKYLDVHVG-PPQIEESFGVSRATTPHECRLRDITYSAPITVDI-EYTRGQQRIIRQA----LPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIV-EVDRTGQITCQVTSSTHGTKSRTNVTT-------KGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTED--AIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRME-RQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALY----------EVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYR---NQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEY--RDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGW----CTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEK 1135
            E  W ++ +F   +GLVRQ +DSF+ F+ T ++ ++  +  +I  + P           +++  ++V  PP   ES G +    P+E R+RD+TY++P+ +D+ + T  +  ++ +     +P G +P+MLRS  C+L G     L  + ECPYD GGYFI  G EKVI+ QE+++ N + V +  +    T      +   KS  N +T         G   +    +++D+P+ V+++A+G +SD+EI+  +  ED   +   +  S+EE     V  QN AL ++  +         P++  I   +D+LA+ VL H+  + +    KA ++  +V+R++         DDRD+YG KR++L+G LL+ LF  LFK+L  +  +   + I      +F+I   ++  +IT G   A+++GNW  +   M+ R GV QVL+R +++S L  + RVN+  EK  K++ PR L  + WGM+CP++TPEG++CGLVKNL+LM +I+  S   P+V      GVE +  +S  +L       +F+NG  +G+  +   LI+  +  RR   ++  VSI      + + + +D GR CRP ++V   + ++  E I+ L  G++ +D+ +  G +E+LDV EE  S IA+             D++ S TH EI P  +LG+CA  IP+P HNQSPRNTYQ AMGKQAMG  A N   R+DTL   L YP +P+V ++++E + F+E+P+GQNA+VA+  YSGY+ ED+II+N++++DRG  R   YR   +Q+++ +   N+ + +   P   A  + +   ++ LD DG+ SPG +V    VL+ K  P       L+P  +    P Y  +D+    +      ++ V+++ N D     K+ +R  R P++GDKF+SRH QKG  G+ ++QEDMPF  +GI PD+I+NPH  PSRMT+G L+E L GK   + G+    T F G  V  IS  L   GF  +G +V+ +G+TG  L+A ++ GP YYQ+LKHMV DK+H RARGP  +LTRQP EGRSR+GGLR GEMERDC+I++GAS  L ERLM  SDA+   VC+ CGLL   G     C  C ++ +VS + IPYA KLL QEL  MNI PR++ E+
Sbjct:    8 EHSWSIISSFFEQKGLVRQQLDSFDQFVKTKMQEVINESPVIIVQSAPTAGIETQKRIAVRFGQIYVSKPPVYTESDGRTITVFPNEARIRDLTYASPLFIDVTKETLSELGVVDKHKYSRVPFGSLPVMLRSSYCVLYGLGDKDLIDLGECPYDQGGYFIVNGSEKVIVAQERMASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSPGVIRVSLPLVKQDVPLFVLYRALGFLSDKEIIDHILYEDDEEMFELLKESIEEGT--VVQDQNVALDYIGKRSAP---IGTPQEKRIVMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQRLLLVALGRRNPDDRDHYGKKRMDLSGPLLASLFRTLFKKLCVDTTRHMQKCIE--NGREFNIALGLKASIITQGFRYALATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIEKEGKLAAPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMAYISVGSSSGPLVEFLEECGVESLEEISTSQLDAAT--KIFVNGVWVGIHSDPVGLIKSLKLLRRSLEMDKEVSIVRDIREKEIRVQSDAGRPCRPLLVVKDNKLVITAEDIRKLKRGEIKWDNLVTSGFIEFLDVEEEEMSMIAMNTKILADESRNSSDVSVSYTHCEIHPALILGICASTIPFPDHNQSPRNTYQSAMGKQAMGIYATNFLLRMDTLSNILFYPQKPLVTTKSMEYLRFKELPSGQNALVAIACYSGYNQEDSIIMNQSAIDRGLFRSFFYRTYTDQESMSRPGVNEEFCK---PSRGAVLRMKNLNYNKLDDDGLISPGTRVTGDDVLIGKITPI------LDPERSTKEAPVYVYKDSSTAMRRTETGIVDTVIVT-NKDGYKFSKVKVRSGRIPQMGDKFASRHAQKGTIGITLRQEDMPFTSEGIVPDIIINPHAIPSRMTIGHLIECLLGKVSAMSGEEGDATPFSGVTVDGISSRLKSYGFQQRGLEVMYNGMTGRKLRAQMFFGPTYYQRLKHMVDDKIHARARGPLQILTRQPVEGRSRDGGLRFGEMERDCIISHGASAFLKERLMDVSDAYSCYVCDFCGLLAMGGSKVNECKGCNNTTNVSMVEIPYAFKLLIQELMGMNIAPRIRFEE 1141

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Match: gi|401012|sp|P30876.1|RPB2_HUMAN (RecName: Full=DNA-directed RNA polymerase II subunit RPB2; AltName: Full=DNA-directed RNA polymerase II 140 kDa polypeptide; AltName: Full=DNA-directed RNA polymerase II subunit B; AltName: Full=RNA polymerase II subunit 2; AltName: Full=RNA polymerase II subunit B2)

HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0
Identity = 444/1166 (38.08%), Postives = 677/1166 (58.06%), Query Frame = 0

Query:   21 SPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSAD-----------PAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYT---RGQQRII--RQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDR------TGQI-TCQVTSSTHGTKSRTNVTTKGG----------RYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMV--GTEDAIMTAMAA-SLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNW-TIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARR-MGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMA---GQLVFDDFLRKGLVEYLDVNEENDSNIALY-------EVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGS-KVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLG------YSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRL 1131
            +P    E  W ++ ++   +GLVRQ +DSF+ FI   ++ IV     +   A+           P + LK+  +++  P   E  G      P+E RLR++TYSAP+ VDI  T    G++++    Q   IG++PIMLRS  C+LNG     L ++NECP DPGGYFI  G EKV++ QE+++ N + V   +      TG+  +C   SS   +    ++  +GG          R       +++++PI +VF+A+G VSD++I++ +    ED  M  M   SL+E     +  QN AL F+ ++  A+   +  K+  I   ++VL + +L HV V  +    KA ++  MV R++ +      +DDRD+YGNKRL+LAG LL+ LF  +FK L  E++  A + I R K   F++   I+  +I+ GL+ ++++GNW   K+    R GV+QVL+RL++ S L  + R+NS   +  K++ PR L  + WGM+CP++TPEG + GLVKNLALM +I+  S+ +PI+       +E++  +S   +++     +F+NG  +G+ K+  +L+   R  RR M  I   VS+      R + I  D GR+CRP +IV   + L+ + HI  L         + D +  G+VEY+D  EE    +A+        EV   ++ TH EI P  +LGVCA +IP+P HNQSPRNTYQ AMGKQAMG    N   R+DTL + L YP +P+V +R++E + F E+PAG N+IVA+ SY+GY+ ED++I+NR+++DRG+ R + YR+ K    +      +    P  +     +   +D LD DG+ +PG++V    V++ K+   +T  +  + +E+  R+   RD     +      +++VM++ N +     KI +R  R P++GDKF+SRHGQKG  G+  +QEDMPF  +GI PD+I+NPH  PSRMT+G L+E L GK    +G+    T F  +  V  IS  L   G++ +G +VL +G TG  + + I+ GP YYQ+LKHMV DK+H RARGP  +L RQP EGRSR+GGLR GEMERDC IA+GA+  L ERL  +SD + V VCN CG++       ++  C  C++   +S +R+PYACKLLFQEL +M+I PR+
Sbjct:   18 TPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDEA--FVIQEQNVALNFIGSR-GAKPGVTKEKR--IKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK--DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPAAIADAT--KIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKT---VTLPENEDELESTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRM 1171

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Match: gi|401018|sp|P31814.1|RPOB_THECE (RecName: Full=DNA-directed RNA polymerase subunit B)

HSP 1 Score: 770.77 bits (1989), Expect = 0.000e+0
Identity = 440/1130 (38.94%), Postives = 660/1130 (58.41%), Query Frame = 0

Query:   27 EDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVD-IEYTRGQQRIIRQALP--IGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVD-RTGQITCQVTSSTHGTKSRTNVTT-KGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFE----DLFKRLNWELKQIADRNIPR--VKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGF--VSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDR--VMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPA--ITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSG------WCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKL 1133
            +D W ++ A+   +GLVRQH+DS+N FI   ++ ++     V     P F +K+  V +G P+ +E+ G  +   P + R+R++TYSAPI ++ I    G   + ++A+   IG++PIML+S  C L G    +L K+ E P DPGGYFI  G E+VI+  E L+ N+ +VE D R  +I  +  S  HG ++   V   K G  Y+K  ++ + +    V +A+G++SD+EIV+ V  +  I   +  +LE+ +  T  TQ +AL ++            PK+  +   ++++   +L H+ V   + K KA Y+ +M  RV+E        DD+D+Y NKRL+LAG LL  LF      L K + +++ +   R   R   +  Q  +   IR D+++  +E+A+++G+W        R GV+Q+L R +YIS L  + RV S   + +     R L  + WG +CP++TPEG +CGLVKNLALM+ ITT   E  +      +GV  I     E   NP ++ ++LNG ++G V++    +   R  RR G I+    V++Y     + +Y+++D GR+ RP IIV  G+  +  EH++ +  G L + D ++ G++EYLD  EE ++ +A +  ++T   THLE+ P  +LG+ A L+PYP HN  PRNTY   M KQ++G    N R R+DT  + + YP  P+V SR ++ + FEE PAGQN +VAV+SY+GY++EDAII+N+AS++RG  R   +R  +A  KRY     DR  +  P +     ++ ++H  LD DGI  P  KV+ + VLV ++ P   +     L  +  Q R    R+T    +      +++V+I+   D   L+K+  R  R PE GDKF+SRHGQKGV GLIV QEDMP+ E GI PD+I+NPHG PSRMTVG+L+E +GGK   L+G+   GTAF G     + +EL   GF + G++V+  GITG  L+A ++ G +YYQ+L HMV DKMH R+RGP  VLT+QPTEGR+REGGLR GEMERD LI +GA+MLL+ERL+  SD  +V VC  CG +          +C  C   + +S + + YA KLL  EL+AM I P LKL
Sbjct:   14 DDLWLVMEAYWKEKGLVRQHLDSYNAFIDHGMQEVIDEFGGVKPDI-PDFEVKFGKVRLGEPEFQEAQGQRKPLYPMDARIRNLTYSAPIYLELIPVVNG---VSQEAVEVRIGELPIMLKSKACRLYGLSDEELIKLGEDPKDPGGYFIVNGSERVIVSIEDLAPNKTLVERDERQNRIIAKCFSYRHGYRALITVERRKDGILYVKLPNVPRPVKFVYVMRALGLLSDREIVEAVSDDPRIQHVLFDNLEDASDVT--TQEEALDYIGKL----SLPGQPKEYRLRRAQNIIDNNLLPHMGVEEKDRKAKAYYLGMMALRVLELSLGLRGEDDKDHYANKRLKLAGDLLMDLFRVAFGQLVKDMQYQMTKTYQRKGERYTFENIQRFVRNSIRPDVLSERIEHALATGSWP-----GGRTGVSQLLDRTNYISTLSHLRRVTSPLSREQPHFEARDLHGTHWGRICPTETPEGPNCGLVKNLALMSQITTGVPEEEVREYLERLGVVPIE----ERRPNPDLWRLYLNGVLVGTVEDGEGFVNRIRTDRRSGKISDIINVALYQDEDVKEIYVNSDDGRVRRPLIIVENGRPKLTREHVEAIKNGSLTWSDLVKMGVIEYLDAEEEENALVATWPWEVTEEHTHLELMPAAILGIPASLVPYPEHNARPRNTYGAGMAKQSLGLGWANFRIRVDTRGHLMHYPQVPLVNSRIMKAVGFEERPAGQNFVVAVLSYAGYNMEDAIIMNKASIERGLARSTFFRTYEAEEKRYLGGQTDRFEIPDPTIQGYLGERYYRH--LDEDGIIFPESKVNGKDVLVGRTSPPRFLEEQSGLGGIILQER----RETSLTVRPSETGVVDKVIITETGDGTKLVKVTTRDLRIPEFGDKFASRHGQKGVIGLIVPQEDMPWTESGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVASLKGRRVDGTAFIGEPEEKLRKELEELGFKHSGREVMYDGITGRRLEADVFVGVIYYQRLHHMVADKMHARSRGPVQVLTKQPTEGRAREGGLRFGEMERDVLIGHGAAMLLIERLLEESDKTEVWVCENCGHIALEDKRRGKVYCPVCGEEERISKVEMSYAFKLLLDELKAMGIRPSLKL 1118

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Match: gi|1339044336|ref|XP_023710255.1| (DNA-directed RNA polymerase III subunit RPC2 [Cryptotermes secundus] >gi|1330908467|gb|PNF30992.1| DNA-directed RNA polymerase III subunit RPC2 [Cryptotermes secundus])

HSP 1 Score: 1838.16 bits (4760), Expect = 0.000e+0
Identity = 856/1142 (74.96%), Postives = 987/1142 (86.43%), Query Frame = 0

Query:    1 MGEAGPAR--PSWAEGSAAKLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYS-GPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTAS-TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKYCD 1138
            MGE G       W +    KL +PI  +E+KW+LV AFL+V+GLV+QHIDSFNYF+  +++ IV+ANEKV S ADP FY+KYL+V VG P +EE++ +S++TTPHECRLRD+TYSAPITVDIEYTRG QR+ R  L IG+MPIMLRS  C+L G+   +LAK+NECP+DPGGYFI KGQEKVILIQEQLS+NRMIVE DR G I CQVTSSTH  KSRTNV  K G+YYLKHN+++ DIP+ ++FKAMGVV DQEIVQM+GTED I+   A SLEEC++A +FTQNQAL+++ +K K ++F+S  PKKSP+D+ RD+LA  VLAHVPV  +NFKMKA Y ALMVRRVI++Q D  ++DDRDYYGNKRLELAGSLL+L+FEDLFKR NWELK IAD+NIP++KAAQFDIVKH+R D IT GL +AIS+GNWTIKRF+MER GVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE+CGLVKNLALMTHITTE EEAPI+RL FN+GVED++LL GEE+++ +++ VFLNG ILGV+++Y +L+RIFR  RR G+INGF+SIY  H  RCVYIS+DGGRLCRPYIIV  G+ LV ++HI  LM G   F DFL +GL+EYLDVNEENDS+IAL E  +    TTHLEIEPFTLLGVCAGL+PYPHHNQSPRNTYQCAMGKQAMG I  NQRNRIDTL+YN+VYP  PMVKSRTIELINF+++PAGQNA VAVMSYSGYDIEDA+ILN+AS+DRGYGRCLVYRN K  LKRYANQTYDR++GPLVDAET+K  WKHD+LDADGI +PG K +NRQVLVNKSMP +T    LNP+     QPEYRD P VYKGP+PS++E+VM+SSNA+DAFLIK+LLRQTRRPE+GDKFSSRHGQKGVTGLIV+QEDMPFN+QGICPDMIMNPHGFPSRMTVGKL+ELL GKAG+LEGKFHYGTAFGGSKV+D+ EELVR+GFNYQGKD   SGITGEPLQAYIY GPVYYQKLKHMV DKMH R RGPRAVLTRQPTEGRSREGGLRLGEMERDCLI YGASM+LVERLMISSDAF+VDVCN CGLL YSGWC +C+SS SVS+I IPYACKLLFQELQ+MNIVPRL L+ YCD
Sbjct:    1 MGEYGNENMVRDW-QSDPKKLGNPIKPIEEKWKLVSAFLTVKGLVKQHIDSFNYFVNVEIRKIVKANEKVCSDADPLFYVKYLNVSVGTPDVEEAYNISKSTTPHECRLRDLTYSAPITVDIEYTRGNQRVARNNLLIGRMPIMLRSSNCVLAGKSQFELAKMNECPHDPGGYFIVKGQEKVILIQEQLSRNRMIVEEDRKGGIQCQVTSSTHEKKSRTNVIVKNGKYYLKHNTLQDDIPVAIIFKAMGVVCDQEIVQMIGTEDHIIQRFAPSLEECHKANIFTQNQALRYLGSKTKQKRFFSSAPKKSPVDEARDLLATMVLAHVPVENFNFKMKATYTALMVRRVIQAQGDTKVIDDRDYYGNKRLELAGSLLALMFEDLFKRFNWELKMIADKNIPKIKAAQFDIVKHMRQDQITNGLVHAISTGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTEVEEAPIIRLAFNIGVEDVNLLGGEEINSFQVYMVFLNGNILGVIRDYQRLVRIFRMMRRSGYINGFISIYAQHQHRCVYISSDGGRLCRPYIIVDKGKPLVKQQHIHELMQGVRNFQDFLNEGLIEYLDVNEENDSHIALNESYIDPQMTTHLEIEPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGAIGYNQRNRIDTLMYNIVYPQAPMVKSRTIELINFDKLPAGQNATVAVMSYSGYDIEDALILNKASIDRGYGRCLVYRNAKTTLKRYANQTYDRILGPLVDAETKKPTWKHDILDADGIAAPGEKAENRQVLVNKSMPTVT----LNPINPLQAQPEYRDVPQVYKGPVPSYVEKVMVSSNAEDAFLIKLLLRQTRRPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDQGICPDMIMNPHGFPSRMTVGKLIELLAGKAGLLEGKFHYGTAFGGSKVADVCEELVRHGFNYQGKDFFYSGITGEPLQAYIYSGPVYYQKLKHMVQDKMHARPRGPRAVLTRQPTEGRSREGGLRLGEMERDCLIGYGASMMLVERLMISSDAFNVDVCNQCGLLAYSGWCHSCRSSGSVSTITIPYACKLLFQELQSMNIVPRLTLKNYCD 1137

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Match: gi|1228004065|ref|XP_021933917.1| (DNA-directed RNA polymerase III subunit RPC2 [Zootermopsis nevadensis] >gi|646702801|gb|KDR11828.1| DNA-directed RNA polymerase III subunit RPC2 [Zootermopsis nevadensis])

HSP 1 Score: 1834.69 bits (4751), Expect = 0.000e+0
Identity = 851/1123 (75.78%), Postives = 982/1123 (87.44%), Query Frame = 0

Query:   18 KLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYS-GPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTAS-TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKYCD 1138
            KL +PI  +E+KW+LVPAFL V+GLV+QHIDSFNYFI  D+K IV+ANEKVIS ADP FY+KYL+V VG P +EE++ +S++TTPHECRLRD+TYSAPITVDIEYTRG QR++R  L IG+MPIMLRS  C+L G+   +LAK+NECP+DPGGYFI KGQEKVILIQEQLS+NRMIVE D  G I CQVTSSTH  KSRTN+  K G+YYLKHN+++ DIPI ++FKAMGVV DQEIVQM+GTE+ IM   + SLEEC++A +FTQNQAL+F+  K K ++++S GPKKSP+D+ RD+L   VLAHVPV  +NFKMKA Y ALMVRRVI++Q D  ++DDRDYYGNKRLELAGSLL+L+FEDLFKR NWELK IAD+NIP++KAAQFDIVKH+R D IT GL +AIS+GNWTIKRFRMER GVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE CGLVKNLALMTHITTE EEAPI+RL FN+GVED++LL GEE+++ +++ VFLNG ILGV++++ +L+RIFR  RR G+INGFVSIYP    RCVYIS+DGGRLCRPYIIV  G+ LV + HI  L+ G   F+DFL +GL+EYLDVNEENDS+IAL E  + A  T+HLEIEPFTLLGVCAGL+PYPHHNQSPRNTYQCAMGKQAMGTI  NQRNRIDTL+YN+VYP  PMVKS TIELINF+++PAGQNA VAVMSYSGYDIEDA+ILN+AS+DRGYGRCLVYRN K  LKRYANQTYDR++GPL+DA+T+K +WKHD+LDADGI +PG KV+NRQVLVNKSMPA+T    LNP+     QPEYRD P VYKGP+PS+IE+VM+SSN +++FLIK+LLRQTRRPE+GDKFSSRHGQKGVTGLIV+QEDMPFN+ GICPDMIMNPHGFPSRMTVGKL+ELL GKAG++EGKFHYGTAFGGSKV+D+ EELVR+GFNYQGKD   SGITGEPLQAYIY GPVYYQKLKHMV DKMH R RGPRAVLTRQPTEGRSREGGLRLGEMERDCLI YGASM+LVERLMISSDAFDVDVCN CGLL YSGWC +C+SS SVS+I IPYACKLLFQELQ+MNIVPRL L+ YCD
Sbjct:   19 KLGNPIKPIEEKWKLVPAFLKVKGLVKQHIDSFNYFINVDIKKIVKANEKVISDADPLFYVKYLNVCVGTPDVEEAYNISKSTTPHECRLRDMTYSAPITVDIEYTRGNQRVVRNNLLIGRMPIMLRSCNCVLAGKSQFELAKMNECPHDPGGYFIVKGQEKVILIQEQLSRNRMIVEEDHKGGIQCQVTSSTHEKKSRTNLVVKNGKYYLKHNTLQDDIPIAIIFKAMGVVCDQEIVQMIGTEEHIMQRFSPSLEECHKAQIFTQNQALRFLGLKTKQKRYFSPGPKKSPVDEARDILTTVVLAHVPVENFNFKMKATYTALMVRRVIQAQGDTKIIDDRDYYGNKRLELAGSLLALMFEDLFKRFNWELKMIADKNIPKIKAAQFDIVKHMRQDQITNGLVHAISTGNWTIKRFRMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEGCGLVKNLALMTHITTEVEEAPIIRLAFNIGVEDVNLLGGEEINSSQVYMVFLNGNILGVIRDHQRLVRIFRLMRRNGYINGFVSIYPQQQHRCVYISSDGGRLCRPYIIVEKGKPLVKQYHISELIQGVRNFEDFLNEGLIEYLDVNEENDSHIALNESSVDAQVTSHLEIEPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYNVVYPQAPMVKSHTIELINFDKLPAGQNATVAVMSYSGYDIEDALILNKASIDRGYGRCLVYRNAKTTLKRYANQTYDRILGPLIDADTKKPVWKHDILDADGIAAPGEKVENRQVLVNKSMPAVT----LNPINPLQAQPEYRDVPQVYKGPVPSYIEKVMLSSNVEESFLIKLLLRQTRRPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDLGICPDMIMNPHGFPSRMTVGKLIELLAGKAGLVEGKFHYGTAFGGSKVADVCEELVRHGFNYQGKDFFYSGITGEPLQAYIYSGPVYYQKLKHMVQDKMHARPRGPRAVLTRQPTEGRSREGGLRLGEMERDCLIGYGASMMLVERLMISSDAFDVDVCNQCGLLAYSGWCHSCRSSASVSTITIPYACKLLFQELQSMNIVPRLTLKNYCD 1137

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Match: gi|1316153190|ref|XP_023221590.1| (DNA-directed RNA polymerase III subunit RPC2-like [Centruroides sculpturatus])

HSP 1 Score: 1795.4 bits (4649), Expect = 0.000e+0
Identity = 819/1129 (72.54%), Postives = 983/1129 (87.07%), Query Frame = 0

Query:   11 WAEGSAAKLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQP---RQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKY 1136
            ++  S  +L  P+  ++DKW+L+PAFL V+GLV+QHIDSFNYF+  ++K I++ANEKV S  DP FYLKY +++VG P+IEE   +++AT PHECRLRD+TYSAPITVDIEYTRGQQR++R ++ IG+MPIMLRS +C+L G+  A+LAK+NECPYDPGGYFI  G EKVIL+QEQLSKNRMIVE DR G ITCQVTSSTH  KSRTN+T K G YYLKHNS   DIPI +VFKAMG+ SDQEIVQM+GT+D +++A A+SLEEC++A V++Q QAL+FM  K++ RK + G KKS +++ RD+LA T+LAHVPV  +NFK+KA+YMALM+RRVI++Q +  ++DDRDYYGNKR+ELAGSLL+LLFED+FKRLN ++K IAD+NIP+VKA+ FD+ K++R DLIT GL  AIS+GNWT+KRF+MER GVTQVLSRLSYIS LGMMTR+NSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITT+ EE PI +L FN+GVEDIHLL+GEELSN  ++ VF+NG ILGVV+ + +L+  FR  RR G+IN FVSI+P+HT RC+YI++DGGR+CRPYIIV  G+  VL+ H++ L  G   F+DFLR+GLVEYLDVNEENDSNIALYE D+  +TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLY LVYP +PMVKSRTIE+INFE +PAGQNA VAVMSYSGYDIEDA+I+N+AS+DRG+GRCLVYRNQK +++RY+N T+DR++GP+VD  T K IWKH+VLDADGI +PG +V+NRQVL+N+SMP++T     NP++  P   +QPE+R+ P  YKG + S +E+VMIS+N+D+++LIK+LLRQTRRPE+GDKFSSRHGQKGV GLIVQQEDMPFN+ GICPDMIMNPHGFPSRMTVGKL+ELL GKAGVLEGKFHYGTAFGGSKV D+S+EL++NGFNY GKD LTSGITGEPL AYIY GPV+YQKLKHMVLDK+H RARGPRAVLTRQPTEGRSREGGLRLGEMERDCLI +GASMLL+ERLM+SSDAFDVDVCN CGLLGYSGWC  C+SS+ V+SIRIPYACKLLFQELQ+MN++PR+KL +Y
Sbjct:    3 YSNISREELCKPVKELKDKWKLLPAFLQVKGLVKQHIDSFNYFVNVEIKKIMKANEKVTSECDPLFYLKYTNIYVGTPEIEEGLQITKATNPHECRLRDLTYSAPITVDIEYTRGQQRVVRNSVTIGRMPIMLRSSKCVLTGKSPAELAKLNECPYDPGGYFIVNGAEKVILLQEQLSKNRMIVEEDRKGGITCQVTSSTHERKSRTNITVKKGNYYLKHNSFTDDIPIAIVFKAMGIESDQEIVQMIGTDDHVLSAFASSLEECHQAQVYSQMQALRFMGGKVRQRKMFGGAKKSVVEEARDLLATTILAHVPVEQFNFKLKALYMALMIRRVIQAQQNTKLIDDRDYYGNKRVELAGSLLALLFEDVFKRLNGDIKAIADKNIPKVKASIFDVFKYMRQDLITNGLVTAISTGNWTVKRFKMERIGVTQVLSRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTDLEEGPICKLAFNLGVEDIHLLNGEELSNRNVYMVFVNGNILGVVREHKRLVHTFRMLRRAGYINEFVSIFPNHTHRCIYIASDGGRMCRPYIIVKNGKPKVLQRHLEELNQGLRFFEDFLREGLVEYLDVNEENDSNIALYESDINENTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYLLVYPQKPMVKSRTIEIINFESLPAGQNATVAVMSYSGYDIEDALIMNKASIDRGFGRCLVYRNQKCLIRRYSNATHDRILGPIVDGTTGKPIWKHEVLDADGIAAPGERVENRQVLINRSMPSVTS----NPIQATPNLMQQPEFREVPLSYKGLVSSSVEKVMISTNSDESYLIKMLLRQTRRPEIGDKFSSRHGQKGVIGLIVQQEDMPFNDNGICPDMIMNPHGFPSRMTVGKLIELLAGKAGVLEGKFHYGTAFGGSKVEDVSQELIKNGFNYLGKDCLTSGITGEPLTAYIYFGPVFYQKLKHMVLDKVHARARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIGHGASMLLLERLMLSSDAFDVDVCNNCGLLGYSGWCHYCRSSRHVASIRIPYACKLLFQELQSMNVIPRIKLSRY 1127

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Match: gi|926638562|ref|XP_013785303.1| (DNA-directed RNA polymerase III subunit RPC2-like [Limulus polyphemus] >gi|1238881108|ref|XP_022253564.1| DNA-directed RNA polymerase III subunit RPC2-like [Limulus polyphemus] >gi|1238881110|ref|XP_022253565.1| DNA-directed RNA polymerase III subunit RPC2-like [Limulus polyphemus])

HSP 1 Score: 1788.47 bits (4631), Expect = 0.000e+0
Identity = 821/1132 (72.53%), Postives = 974/1132 (86.04%), Query Frame = 0

Query:   11 WAEGSAAKLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSG-PKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQP---EYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKYCD 1138
            W       +  P+  ++DKW+L+PAFL V+GLV QH+DSFNYFI  D+K I+ AN K+ S ADP FY+KYL++H+G P +EE F V++ T PHECRLRD+TYSAPITVDIEYTRGQQR++R  +PIG+MPIMLRS +C+L G+  A+LAK+NECP+DPGGYFI  G EKVIL QEQLSKNRMIVE D  G I CQVTSSTH  K+RTN+  K G YYLKHNS  +DIPI +VFKAMGV SDQEIVQM+GT+D  ++  A SLEEC+RA V+TQ QAL++M  K+K R+ + G PKK+PI++ RD+L  T+LAH+P   + FK+KA+YMALMVRR+IE+Q +  ++DDRDYYGNKR+ELAGSLLSLLFEDLFKR N ELK IAD+NIP++KAAQFDI+KH+R D IT GL  AIS+GNWT+KRF+MER GVTQVLSRLSYISALGMMTR+NSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITT+ EE P+++L FN+GVED+HLLSGEELS+P ++ VFLNGGILGV+K+Y +L+  FR  RR G+IN FVSI+P+HT RCVYI++DGGRLCRPYIIV GG+ +V + H++ L  G   F+DF+  GL+EYLDVNEENDSN+ALY+  ++  TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTI LNQRNRIDTLLY L YP RPMVKSRTIELINFE++PAGQNA VAVMSYSGYDIEDAI++N+ASLDRG+GRCLVYR+QK  LKRY NQT+DRV+GP++DA T+K IWKH+VLDADGI +PG +V++RQV+VNKSMPA+T    +NP++T P QP   E+R+ P VYKG  PS++E+VMISSN ++AFLIK+L+RQTRRPE+GDKFSSRHGQKGV GLI QQEDMPFN+QGICPD+IMNPHG+PSRMTVGKL+EL+GGKAGVLEGKFHYGTAFGGS + +IS+EL++NGFNY GKD LTSGITGE L  YIY GP+YYQKLKHMV+DK+H RARGPRAVLTRQPTEGRSREGGLRLGEMERDCLI +GASMLL+ERLM+SSDAF VDVCN CGLLGYSGWC  C+SS+ ++SI+IPYACKLLFQELQ+MNI+PRLKL KY D
Sbjct:    2 WNIVKDPTVTKPVKELKDKWKLLPAFLQVKGLVNQHVDSFNYFITVDIKKILMANSKITSDADPLFYMKYLNIHIGNPDVEEGFNVTKPTCPHECRLRDMTYSAPITVDIEYTRGQQRVVRNNVPIGRMPIMLRSSKCVLTGKSPAELAKLNECPHDPGGYFIVNGIEKVILCQEQLSKNRMIVEEDSKGGIACQVTSSTHERKTRTNIIVKHGHYYLKHNSFSEDIPIAIVFKAMGVESDQEIVQMIGTDDHTLSVFAPSLEECHRAQVYTQTQALRWMGNKIKQRRIWGGGPKKTPIEEARDLLITTILAHIPTEQFTFKVKAMYMALMVRRIIEAQTNPKLIDDRDYYGNKRVELAGSLLSLLFEDLFKRFNSELKMIADKNIPKIKAAQFDIIKHMRQDQITNGLITAISTGNWTVKRFKMERVGVTQVLSRLSYISALGMMTRINSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTDMEEEPLIKLAFNLGVEDVHLLSGEELSHPDVYMVFLNGGILGVIKDYQRLVHTFRILRRAGYINEFVSIFPNHTHRCVYIASDGGRLCRPYIIVKGGRPMVTQAHLEELNRGVRQFEDFIHDGLIEYLDVNEENDSNVALYQTSISVETTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGLNQRNRIDTLLYLLAYPHRPMVKSRTIELINFEQLPAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCLVYRSQKCTLKRYTNQTFDRVLGPMIDATTRKPIWKHEVLDADGISAPGERVESRQVVVNKSMPAVT----MNPIQTTPGQPQQVEHREVPIVYKGLEPSYVEKVMISSNNEEAFLIKLLMRQTRRPEIGDKFSSRHGQKGVVGLIAQQEDMPFNDQGICPDLIMNPHGYPSRMTVGKLLELVGGKAGVLEGKFHYGTAFGGSSIHEISKELIKNGFNYLGKDTLTSGITGEHLSGYIYFGPIYYQKLKHMVMDKIHARARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIGHGASMLLLERLMLSSDAFQVDVCNQCGLLGYSGWCHYCQSSRQIASIQIPYACKLLFQELQSMNIIPRLKLSKYFD 1129

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Match: gi|321468089|gb|EFX79076.1| (hypothetical protein DAPPUDRAFT_305037 [Daphnia pulex])

HSP 1 Score: 1778.84 bits (4606), Expect = 0.000e+0
Identity = 829/1138 (72.85%), Postives = 965/1138 (84.80%), Query Frame = 0

Query:    1 MGEAGPARPSWAEGSAAKLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKYCD 1138
            MGEA  +R   A+    KL  PI AVE+KW+LVPAFL  +GLV+QHIDS+NYFI  D+K IV+ANEKV+S +D  FY+KYLD+HVG P   E    SR TTPHECRLRD+TYSAP+TVDIEYTRGQQRI+R  +PIG+MPIMLRS  C L G   A++AK NECPYD GGYFI +G EKVILIQEQ+SKNRMIVE DR G ++CQVTSSTHGTK+RTNV    G+YYLK NS + DIP+ +VFKAMG+VSDQEIVQM+GT+D +MT+ A SLEEC RA++FTQ QAL  +  K++ ++F+ GPKK+  ++ R+ LA T+LAHVPV  +NFK KA+Y+ALM+RRVI+++ND + VDDRDYYGNKRLELAGSLLSLLFEDLFKR+N+ELKQIAD+NIP++KAAQFD++KHIR D IT GLENAIS+GNWTIKRFRM+RQGVTQ+L RLSYIS LGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE CGLVKNLALMTHITTE+EE PI R+  N+GVEDI+L SGEE+S+P I+TVFLNG ILG+VK+Y +LIR F+ ARR GFIN FVSIYPH  TR VYIS+DGGRLCRPYIIV  G++ + ++H++ L      F+DF+  GL+EYLDVNEENDSNIA+YE D+   TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIA NQRNRIDTLLYNLVYP +PMVK+RTIELINFE +PAGQNA+VAVMSYSG+DIEDA +LN+ASLDRGYGRCLVY+N K  LKRY NQ+ DRV GP++DA ++K IWKHD+LDADG  + G  V+ +QVL+NK+MP                 PEYRD P  YKG IPS++E+VM SSNA++A +IKI LRQTRRPE+GDKFSSRHGQKGVT L+ +QED+PF E GICPD+IMNPHGFPSRMTVGKL+ELL GKAG+LEGKFHYGTAFGGSKV D+SEEL+++G+NYQGK+ +TSG TGE L AYIY GPVYYQKLKHMV+DKMH R+RGPRAVLTRQPTEGR+REGGLRLGEMERDCLIAYG+SML++ERLMISSDAFDVDVCN CGL+GY GWC  CKSS SVSSIRIPYACKLLFQELQAMNI PRLKL+KY D
Sbjct:    1 MGEA--SRDVCAD--LEKLLEPIKAVEEKWKLVPAFLKTKGLVKQHIDSYNYFINVDIKKIVKANEKVVSHSDQTFYIKYLDIHVGKPDSIEDMNHSRLTTPHECRLRDMTYSAPVTVDIEYTRGQQRIVRNGIPIGRMPIMLRSSNCTLAGISPAEMAKKNECPYDCGGYFIVRGNEKVILIQEQMSKNRMIVEQDRKGNMSCQVTSSTHGTKTRTNVVVNKGKYYLKQNSFQDDIPVAIVFKAMGIVSDQEIVQMIGTDDRVMTSFAPSLEECVRASIFTQQQALGHLGNKLRQKRFFGGPKKTATEEARETLATTILAHVPVENFNFKAKAMYLALMIRRVIQAENDPTSVDDRDYYGNKRLELAGSLLSLLFEDLFKRMNFELKQIADKNIPKIKAAQFDVIKHIRTDHITNGLENAISTGNWTIKRFRMDRQGVTQMLCRLSYISGLGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEGCGLVKNLALMTHITTEAEEEPISRIAQNMGVEDINLFSGEEISDPSIYTVFLNGNILGLVKDYLRLIRYFKLARRHGFINAFVSIYPHFQTRSVYISSDGGRLCRPYIIVRKGKAALTDKHMQELADSFRTFEDFIHDGLIEYLDVNEENDSNIAVYESDINEETTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIACNQRNRIDTLLYNLVYPHKPMVKTRTIELINFENLPAGQNAMVAVMSYSGFDIEDATVLNKASLDRGYGRCLVYKNAKCALKRYNNQSSDRVNGPILDAASKKPIWKHDILDADGFAAVGQPVEPKQVLINKAMPTAPVVTVAPGAPAAVPLPEYRDVPIAYKGAIPSYVEKVMFSSNAEEAHIIKIQLRQTRRPEIGDKFSSRHGQKGVTALVAEQEDLPFTELGICPDVIMNPHGFPSRMTVGKLIELLAGKAGLLEGKFHYGTAFGGSKVQDVSEELIKHGYNYQGKECMTSGTTGEQLSAYIYFGPVYYQKLKHMVMDKMHARSRGPRAVLTRQPTEGRAREGGLRLGEMERDCLIAYGSSMLILERLMISSDAFDVDVCNQCGLMGYFGWCHYCKSSASVSSIRIPYACKLLFQELQAMNIAPRLKLDKYFD 1134

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Match: gi|1000761723|ref|XP_015603902.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Cephus cinctus])

HSP 1 Score: 1769.21 bits (4581), Expect = 0.000e+0
Identity = 816/1116 (73.12%), Postives = 957/1116 (85.75%), Query Frame = 0

Query:   23 IAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKYCD 1138
            +  +EDKW+LVPAFL  +GLV+QHIDSFNYFI  D+K I++ANEKV+S ADP FY+KYL+V VG P +EESF V+R+TTPHECRLRD+ YSAPITVDIEYTRG QRIIR  L IG+MPIMLRS  C+L  + H +LAK+NECP+DPGGYFI  GQEKVILIQEQ+S+NR+I+E D  G I     SSTH  K++TN+  K G+YYL+HN  + DIP+ ++FKAMG+V DQEI+Q++GTE+  M   A +LEEC+   VFTQ+QAL++++ K K ++F    K S +D+++D LA  +L+HVPV  +NFKMKA Y+ALM+R+V+++Q DG +VDDRDYYGNKRLELAGSLLSL+FEDLFKR NWELKQIAD+NIP++KAAQFDIVKH+R D IT GL  AISSGNWTIKRF+MER GVTQVLSRLSYISALGMMTRVNSQFEK+RKVSGPRSLQPSQWGMLCPSDTPEGE+CGLVKNLALMTHITTE EE PI+RL FN+GVE++++L GEE++N  ++ VFLNG ILG+VKNY +L+ +FR  RR G INGFVSIYP H  RCV IS+DGGRLCRPYIIV  G+SLV  EHIKLL  G   F+DFL+ G++EYLDVNEENDS+IA  E  +   TTHLEIEPFTLLGVCAGL+PYPHHNQSPRNTYQCAMGKQAMGTI  NQRNRIDTL+YNLVYP  PMVKSRTIELINF+++PAGQNAIVAVMSYSGYDIEDA+ILN+AS+DRGYGRCLVYRN K  LKRYANQTYDR+MGPL+DA T+K +WKHD++D DGI +PG  V+NR+V+VNKSMPA T    +NP   Q  QPEYR+ P V+KGP+P+++E+VMISSNA+DAFLIK+LLRQTRRPE+GDKFSSRHGQKGVTGLIV+QEDMPFN+ GICPDMIMNPHGFPSRMTVGKL+ELL GKAGVL+G+FHYGTAFGGSKV D+ EELV +G+NY GKD   SGITGEPLQAYIY GPVYYQKLKHMV DKMH RARGPRAVLTRQPTEGRS+EGGLRLGEMERDCLI YGASM+L+ERLMISSDAFDVD+CN CGL+ YSGWC +C+SS  VS+I +PYACKLLFQELQ+MNIVPRL L+ YC+
Sbjct:   22 VKHIEDKWKLVPAFLKGKGLVKQHIDSFNYFINVDIKKIIKANEKVLSDADPLFYVKYLNVFVGTPDVEESFNVTRSTTPHECRLRDLNYSAPITVDIEYTRGHQRIIRSNLLIGRMPIMLRSSNCVLADKSHFELAKMNECPHDPGGYFIINGQEKVILIQEQMSRNRIILEEDSRGCIVSSCNSSTHERKTKTNIVGKAGKYYLRHNIFQDDIPVTIIFKAMGIVCDQEIMQLIGTEEEFMKKFAPTLEECHILNVFTQSQALRYLSNKRKQKRF-PVLKTSLVDEMKDTLATNILSHVPVTDFNFKMKATYIALMIRKVMQAQCDGKLVDDRDYYGNKRLELAGSLLSLMFEDLFKRFNWELKQIADKNIPKIKAAQFDIVKHMRQDQITNGLAFAISSGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKSRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTEVEEEPIIRLAFNLGVENVNILGGEEINNKDVYMVFLNGNILGIVKNYIRLVSVFRLLRRKGLINGFVSIYPQHQHRCVQISSDGGRLCRPYIIVKNGESLVQSEHIKLLEQGVRTFEDFLQDGMIEYLDVNEENDSSIAFNESHINLRTTHLEIEPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYNLVYPQAPMVKSRTIELINFDKLPAGQNAIVAVMSYSGYDIEDALILNKASIDRGYGRCLVYRNAKCTLKRYANQTYDRIMGPLIDANTKKPVWKHDIIDTDGIAAPGEMVENRKVMVNKSMPAATIS-PVNPGNVQT-QPEYREVPVVFKGPVPAYVEKVMISSNAEDAFLIKLLLRQTRRPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDSGICPDMIMNPHGFPSRMTVGKLIELLAGKAGVLKGEFHYGTAFGGSKVEDVCEELVNHGYNYLGKDFFYSGITGEPLQAYIYSGPVYYQKLKHMVQDKMHARARGPRAVLTRQPTEGRSKEGGLRLGEMERDCLIGYGASMMLIERLMISSDAFDVDICNTCGLMAYSGWCHSCRSSACVSTISMPYACKLLFQELQSMNIVPRLTLKNYCE 1134

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Match: gi|1330908469|gb|PNF30994.1| (DNA-directed RNA polymerase III subunit RPC2 [Cryptotermes secundus])

HSP 1 Score: 1768.44 bits (4579), Expect = 0.000e+0
Identity = 826/1104 (74.82%), Postives = 952/1104 (86.23%), Query Frame = 0

Query:    1 MGEAGPAR--PSWAEGSAAKLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYS-GPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTAS-TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNC 1100
            MGE G       W +    KL +PI  +E+KW+LV AFL+V+GLV+QHIDSFNYF+  +++ IV+ANEKV S ADP FY+KYL+V VG P +EE++ +S++TTPHECRLRD+TYSAPITVDIEYTRG QR+ R  L IG+MPIMLRS  C+L G+   +LAK+NECP+DPGGYFI KGQEKVILIQEQLS+NRMIVE DR G I CQVTSSTH  KSRTNV  K G+YYLKHN+++ DIP+ ++FKAMGVV DQEIVQM+GTED I+   A SLEEC++A +FTQNQAL+++ +K K ++F+S  PKKSP+D+ RD+LA  VLAHVPV  +NFKMKA Y ALMVRRVI++Q D  ++DDRDYYGNKRLELAGSLL+L+FEDLFKR NWELK IAD+NIP++KAAQFDIVKH+R D IT GL +AIS+GNWTIKRF+MER GVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE+CGLVKNLALMTHITTE EEAPI+RL FN+GVED++LL GEE+++ +++ VFLNG ILGV+++Y +L+RIFR  RR G+INGF+SIY  H  RCVYIS+DGGRLCRPYIIV  G+ LV ++HI  LM G   F DFL +GL+EYLDVNEENDS+IAL E  +    TTHLEIEPFTLLGVCAGL+PYPHHNQSPRNTYQCAMGKQAMG I  NQRNRIDTL+YN+VYP  PMVKSRTIELINF+++PAGQNA VAVMSYSGYDIEDA+ILN+AS+DRGYGRCLVYRN K  LKRYANQTYDR++GPLVDAET+K  WKHD+LDADGI +PG K +NRQVLVNKSMP +T    LNP+     QPEYRD P VYKGP+PS++E+VM+SSNA+DAFLIK+LLRQTRRPE+GDKFSSRHGQKGVTGLIV+QEDMPFN+QGICPDMIMNPHGFPSRMTVGKL+ELL GKAG+LEGKFHYGTAFGGSKV+D+ EELVR+GFNYQGKD   SGITGEPLQAYIY GPVYYQKLKHMV DKMH R RGPRAVLTRQPTEGRSREGGLRLGEMERDCLI YGASM+LVERLMISSDAF+VDVCN CGLL YSGW  NC
Sbjct:    1 MGEYGNENMVRDW-QSDPKKLGNPIKPIEEKWKLVSAFLTVKGLVKQHIDSFNYFVNVEIRKIVKANEKVCSDADPLFYVKYLNVSVGTPDVEEAYNISKSTTPHECRLRDLTYSAPITVDIEYTRGNQRVARNNLLIGRMPIMLRSSNCVLAGKSQFELAKMNECPHDPGGYFIVKGQEKVILIQEQLSRNRMIVEEDRKGGIQCQVTSSTHEKKSRTNVIVKNGKYYLKHNTLQDDIPVAIIFKAMGVVCDQEIVQMIGTEDHIIQRFAPSLEECHKANIFTQNQALRYLGSKTKQKRFFSSAPKKSPVDEARDLLATMVLAHVPVENFNFKMKATYTALMVRRVIQAQGDTKVIDDRDYYGNKRLELAGSLLALMFEDLFKRFNWELKMIADKNIPKIKAAQFDIVKHMRQDQITNGLVHAISTGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTEVEEAPIIRLAFNIGVEDVNLLGGEEINSFQVYMVFLNGNILGVIRDYQRLVRIFRMMRRSGYINGFISIYAQHQHRCVYISSDGGRLCRPYIIVDKGKPLVKQQHIHELMQGVRNFQDFLNEGLIEYLDVNEENDSHIALNESYIDPQMTTHLEIEPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGAIGYNQRNRIDTLMYNIVYPQAPMVKSRTIELINFDKLPAGQNATVAVMSYSGYDIEDALILNKASIDRGYGRCLVYRNAKTTLKRYANQTYDRILGPLVDAETKKPTWKHDILDADGIAAPGEKAENRQVLVNKSMPTVT----LNPINPLQAQPEYRDVPQVYKGPVPSYVEKVMVSSNAEDAFLIKLLLRQTRRPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDQGICPDMIMNPHGFPSRMTVGKLIELLAGKAGLLEGKFHYGTAFGGSKVADVCEELVRHGFNYQGKDFFYSGITGEPLQAYIYSGPVYYQKLKHMVQDKMHARPRGPRAVLTRQPTEGRSREGGLRLGEMERDCLIGYGASMMLVERLMISSDAFNVDVCNQCGLLAYSGW--NC 1097

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Match: gi|1330908468|gb|PNF30993.1| (DNA-directed RNA polymerase III subunit RPC2 [Cryptotermes secundus])

HSP 1 Score: 1768.05 bits (4578), Expect = 0.000e+0
Identity = 824/1100 (74.91%), Postives = 950/1100 (86.36%), Query Frame = 0

Query:    1 MGEAGPAR--PSWAEGSAAKLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYS-GPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTAS-TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGW 1096
            MGE G       W +    KL +PI  +E+KW+LV AFL+V+GLV+QHIDSFNYF+  +++ IV+ANEKV S ADP FY+KYL+V VG P +EE++ +S++TTPHECRLRD+TYSAPITVDIEYTRG QR+ R  L IG+MPIMLRS  C+L G+   +LAK+NECP+DPGGYFI KGQEKVILIQEQLS+NRMIVE DR G I CQVTSSTH  KSRTNV  K G+YYLKHN+++ DIP+ ++FKAMGVV DQEIVQM+GTED I+   A SLEEC++A +FTQNQAL+++ +K K ++F+S  PKKSP+D+ RD+LA  VLAHVPV  +NFKMKA Y ALMVRRVI++Q D  ++DDRDYYGNKRLELAGSLL+L+FEDLFKR NWELK IAD+NIP++KAAQFDIVKH+R D IT GL +AIS+GNWTIKRF+MER GVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE+CGLVKNLALMTHITTE EEAPI+RL FN+GVED++LL GEE+++ +++ VFLNG ILGV+++Y +L+RIFR  RR G+INGF+SIY  H  RCVYIS+DGGRLCRPYIIV  G+ LV ++HI  LM G   F DFL +GL+EYLDVNEENDS+IAL E  +    TTHLEIEPFTLLGVCAGL+PYPHHNQSPRNTYQCAMGKQAMG I  NQRNRIDTL+YN+VYP  PMVKSRTIELINF+++PAGQNA VAVMSYSGYDIEDA+ILN+AS+DRGYGRCLVYRN K  LKRYANQTYDR++GPLVDAET+K  WKHD+LDADGI +PG K +NRQVLVNKSMP +T    LNP+     QPEYRD P VYKGP+PS++E+VM+SSNA+DAFLIK+LLRQTRRPE+GDKFSSRHGQKGVTGLIV+QEDMPFN+QGICPDMIMNPHGFPSRMTVGKL+ELL GKAG+LEGKFHYGTAFGGSKV+D+ EELVR+GFNYQGKD   SGITGEPLQAYIY GPVYYQKLKHMV DKMH R RGPRAVLTRQPTEGRSREGGLRLGEMERDCLI YGASM+LVERLMISSDAF+VDVCN CGLL YSGW
Sbjct:    1 MGEYGNENMVRDW-QSDPKKLGNPIKPIEEKWKLVSAFLTVKGLVKQHIDSFNYFVNVEIRKIVKANEKVCSDADPLFYVKYLNVSVGTPDVEEAYNISKSTTPHECRLRDLTYSAPITVDIEYTRGNQRVARNNLLIGRMPIMLRSSNCVLAGKSQFELAKMNECPHDPGGYFIVKGQEKVILIQEQLSRNRMIVEEDRKGGIQCQVTSSTHEKKSRTNVIVKNGKYYLKHNTLQDDIPVAIIFKAMGVVCDQEIVQMIGTEDHIIQRFAPSLEECHKANIFTQNQALRYLGSKTKQKRFFSSAPKKSPVDEARDLLATMVLAHVPVENFNFKMKATYTALMVRRVIQAQGDTKVIDDRDYYGNKRLELAGSLLALMFEDLFKRFNWELKMIADKNIPKIKAAQFDIVKHMRQDQITNGLVHAISTGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTEVEEAPIIRLAFNIGVEDVNLLGGEEINSFQVYMVFLNGNILGVIRDYQRLVRIFRMMRRSGYINGFISIYAQHQHRCVYISSDGGRLCRPYIIVDKGKPLVKQQHIHELMQGVRNFQDFLNEGLIEYLDVNEENDSHIALNESYIDPQMTTHLEIEPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGAIGYNQRNRIDTLMYNIVYPQAPMVKSRTIELINFDKLPAGQNATVAVMSYSGYDIEDALILNKASIDRGYGRCLVYRNAKTTLKRYANQTYDRILGPLVDAETKKPTWKHDILDADGIAAPGEKAENRQVLVNKSMPTVT----LNPINPLQAQPEYRDVPQVYKGPVPSYVEKVMVSSNAEDAFLIKLLLRQTRRPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDQGICPDMIMNPHGFPSRMTVGKLIELLAGKAGLLEGKFHYGTAFGGSKVADVCEELVRHGFNYQGKDFFYSGITGEPLQAYIYSGPVYYQKLKHMVQDKMHARPRGPRAVLTRQPTEGRSREGGLRLGEMERDCLIGYGASMMLVERLMISSDAFNVDVCNQCGLLAYSGW 1095

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Match: gi|817198458|ref|XP_012274877.1| (DNA-directed RNA polymerase III subunit RPC2 isoform X1 [Orussus abietinus] >gi|817198460|ref|XP_012274878.1| DNA-directed RNA polymerase III subunit RPC2 isoform X1 [Orussus abietinus])

HSP 1 Score: 1759.96 bits (4557), Expect = 0.000e+0
Identity = 816/1116 (73.12%), Postives = 954/1116 (85.48%), Query Frame = 0

Query:   23 IAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPMETQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKYCD 1138
            +  +++KW+LVPAFL  RGLV+QHIDSFNYFI  ++K IV+ANEKVIS ADP FY+KYL+V++G P +EESF V+R+TTPHECRLRD+ YSAPITVDIEYTRG QRIIR  L IG+MPIMLRS  C+L G+ H +LAK+NECP+DPGGYF+  GQEKVILIQEQL +NR+I+E D  G I     SSTH  K++TNV  + G+YYL+HN  + DIPI ++FKAMG+VSDQEI+Q++GTE+  M     +LEEC+   VFTQNQAL++++ K K ++F +  K S ID+++D LA  +L+HVPV   NFKMKA Y+ALM+RRV++ Q DG +VDDRDYYGNKRLELAGSLLSL+FEDLFKR NWELKQIAD+NIP++KAAQFDIVKH+R D IT GL  AISSGNWTIKRF+MER  VTQVLSRLS+ISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE CGLVKNLALMTHITTE EE PI+RL FN+GVE++++L GEE++   ++ VFLNG ILG+VKNY +LI +FR  RR G ++GFVSIYP H  RCV IS+DGGRLCRPYIIV  G+ LV  EHIKLL  G   F+DFL+ G++EYLDVNEENDS IA  E  +T  TTHLEIEPFTLLGVCAGL+PYPHHNQSPRNTYQCAMGKQAMGTI  NQRNRIDTL+YNLVYP  PMVKSRTIELINF+++PAGQNAIVAVMSYSGYDIEDA+ILN+AS+DRGYGRCLVYRN K ILKRYANQTYDR+MGPL+D+  +K +WKHD++D+DGI SPG  V+NR+V+VNKSMPA T    +NP   Q  Q EYR+ P V+KGP+P+++E+VMISSNA+DAFLIK+LLRQTRRPE+GDKFSSRHGQKGVTGLIV+QEDMPFN+ GICPDMIMNPHGFPSRMTVGKL+ELL GKAGV++G+FHYGTAFGGSKV D+ EELV++G+NY GKD   SGITGEPLQAYIY GPVYYQKLKHMV DKMH RARGPRAVLTRQPTEGRS+EGGLRLGEMERDCLI YGASM+L+ERLMISSDAFDVDVCN CGL+ YSGWC +C+SS  VS+I +PYACKLLFQELQ+MNIVPRL L+ YCD
Sbjct:   22 VKYIQNKWKLVPAFLKGRGLVKQHIDSFNYFINVEIKKIVKANEKVISDADPLFYVKYLNVYIGSPDVEESFNVTRSTTPHECRLRDLNYSAPITVDIEYTRGHQRIIRNNLLIGRMPIMLRSSNCVLTGKSHFELAKMNECPHDPGGYFVVNGQEKVILIQEQLLRNRVILEDDSKGCIIASCNSSTHERKTKTNVVGRAGKYYLRHNIFQDDIPITLLFKAMGIVSDQEIMQLIGTEEEFMKKFLPTLEECHVLCVFTQNQALRYLSNKRKQKRF-TVAKSSVIDEMKDTLASNILSHVPVVDCNFKMKATYIALMIRRVMQVQRDGKLVDDRDYYGNKRLELAGSLLSLMFEDLFKRFNWELKQIADKNIPKIKAAQFDIVKHMRQDQITNGLAFAISSGNWTIKRFKMERHAVTQVLSRLSFISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEGCGLVKNLALMTHITTEVEEEPIIRLAFNLGVENVNILGGEEINKKDVYIVFLNGNILGIVKNYVRLINVFRMLRRKGLMSGFVSIYPQHQHRCVQISSDGGRLCRPYIIVKKGEPLVQAEHIKLLEQGVRTFEDFLQDGMIEYLDVNEENDSFIAFNESHITWKTTHLEIEPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYNLVYPQAPMVKSRTIELINFDKLPAGQNAIVAVMSYSGYDIEDALILNKASIDRGYGRCLVYRNAKCILKRYANQTYDRIMGPLIDSTNKKPVWKHDIIDSDGIASPGEMVENRKVMVNKSMPAATIS-PVNPGNVQA-QTEYREVPVVFKGPVPAYVEKVMISSNAEDAFLIKLLLRQTRRPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDSGICPDMIMNPHGFPSRMTVGKLIELLAGKAGVIKGEFHYGTAFGGSKVEDVCEELVKHGYNYLGKDCFYSGITGEPLQAYIYSGPVYYQKLKHMVQDKMHARARGPRAVLTRQPTEGRSKEGGLRLGEMERDCLIGYGASMMLIERLMISSDAFDVDVCNTCGLMAYSGWCHSCRSSACVSTISMPYACKLLFQELQSMNIVPRLTLKNYCD 1134

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Match: gi|597773745|ref|XP_007250603.1| (DNA-directed RNA polymerase III subunit RPC2 [Astyanax mexicanus])

HSP 1 Score: 1756.11 bits (4547), Expect = 0.000e+0
Identity = 818/1131 (72.33%), Postives = 968/1131 (85.59%), Query Frame = 0

Query:    8 RPSWAEGSAAKLASPIAAVEDKWQLVPAFLSVRGLVRQHIDSFNYFIATDLKNIVRANEKVISSADPAFYLKYLDVHVGPPQIEESFGVSRATTPHECRLRDITYSAPITVDIEYTRGQQRIIRQALPIGQMPIMLRSDRCILNGRDHAQLAKVNECPYDPGGYFITKGQEKVILIQEQLSKNRMIVEVDRTGQITCQVTSSTHGTKSRTNVTTKGGRYYLKHNSMEKDIPIGVVFKAMGVVSDQEIVQMVGTEDAIMTAMAASLEECNRATVFTQNQALKFMAAKMKARKFYSGPKKSPIDDVRDVLAETVLAHVPVRGYNFKMKAIYMALMVRRVIESQNDGSMVDDRDYYGNKRLELAGSLLSLLFEDLFKRLNWELKQIADRNIPRVKAAQFDIVKHIRCDLITIGLENAISSGNWTIKRFRMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHITTESEEAPIVRLGFNVGVEDIHLLSGEELSNPRIFTVFLNGGILGVVKNYSKLIRIFRAARRMGFINGFVSIYPHHTTRCVYISADGGRLCRPYIIVSGGQSLVLEEHIKLLMAGQLVFDDFLRKGLVEYLDVNEENDSNIALYEVDMTASTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLLYNLVYPMRPMVKSRTIELINFEEMPAGQNAIVAVMSYSGYDIEDAIILNRASLDRGYGRCLVYRNQKAILKRYANQTYDRVMGPLVDAETQKQIWKHDVLDADGIGSPGMKVDNRQVLVNKSMPAITRGDALNPME--TQPRQPEYRDTPNVYKGPIPSFIERVMISSNADDAFLIKILLRQTRRPELGDKFSSRHGQKGVTGLIVQQEDMPFNEQGICPDMIMNPHGFPSRMTVGKLMELLGGKAGVLEGKFHYGTAFGGSKVSDISEELVRNGFNYQGKDVLTSGITGEPLQAYIYHGPVYYQKLKHMVLDKMHGRARGPRAVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLVERLMISSDAFDVDVCNGCGLLGYSGWCTNCKSSKSVSSIRIPYACKLLFQELQAMNIVPRLKLEKY 1136
            R  + E SA +LA+P++ VE+KW+L+PAFL V+GLV+QHIDSFNYFI  ++K I++ANEKV S ADP +YLKYL+++VG P +EESF V+R  +PHECRLRD+TYSAPITVDIEYTRG QRIIR ALPIG+MPIMLRS  C+L G+   + +K+NECP DPGGYFI KGQEKVILIQEQLSKNR+IVE DR G +   VTSSTH  KSRTN+  K GR+YLKHN++ +D PI ++FKAMGV SDQEIVQM+GTE+ +M A A SLEEC +A +FTQ QALK++  K++ ++ + GPKK+ +++ R++LA T+L HVPV+ +NF+ K IY+A+MVRRVI +Q +   VDDRDYYGNKRLELAG LLSLLFEDLFK+ N ELK+IAD+ IP+ +AAQFD+VKH+R D IT G+ NAIS+GNW++KRF+M+RQGVTQVLSRLS+ISALGMMTR++SQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE+CGLVKNLALMTHITT+ E+ PI++L FN+GVED++LL GEELS P +F VFLNG ILGV++N+ KL+  FR  RR GFIN FVSI  + T RCVYIS+DGGRLCRPYIIV  GQ  V  +HI+ L  G   F+DFL + LVEYLDVNEEND +IALYE  +T  TTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTI  NQRNRIDTL+Y L YP RPMVK++TIELI+FE++PAGQNA VAVMSYSGYDIEDA++LN+ASLDRG+GRCLVY+N K  L+RY NQT+D+VMGP++DAET+K IW+H +LDADGI SPG +V+N+QVLVNKSMP +T+     P+E  TQP QP+YRD P  YKG   S+IE+VMISSNA+DAFL+KILLRQTRRPE+GDKFSSRHGQKGV GLIV QEDMPF + GICPD+IMNPHG+PSRMTVGKL+ELL GKAGVL+G+FHYGTAFGGSKV D+ E+L+R G+NYQGKD +TSGITGEPL+AYIY GPVYYQKLKHMVLDKMH RARGPRAVLTRQPTEGRSR+GGLRLGEMERDCLI YGASMLL+ERLMISSDAF+VDVC  CGLLGYSGWC  CKSS  VSS+RIPYACKLLFQELQ+MNI+PRLKL +Y
Sbjct:    5 REDFGELSAQQLAAPVSTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIFKAMGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQTQALKYIGNKVRRQRMWGGPKKTKMEEARELLASTILTHVPVKEFNFRAKCIYLAVMVRRVILAQGNNK-VDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPTVFLVFLNGNILGVIRNHQKLVSTFRLMRRAGFINEFVSISTNVTDRCVYISSDGGRLCRPYIIVKNGQPAVKNKHIEELSQGYRNFEDFLHESLVEYLDVNEENDCSIALYEHMITKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLRRYTNQTFDKVMGPMLDAETRKPIWRHSILDADGICSPGERVENKQVLVNKSMPTVTQ----TPLEGSTQPGQPQYRDVPITYKGSTDSYIEKVMISSNAEDAFLVKILLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRY 1130

The following BLAST results are available for this feature:

BLAST of dna-directed rna polymerase iii subunit rpc2 vs. L. salmonis genes
BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr

BLAST of dna-directed rna polymerase iii subunit rpc2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3


Match Name	E-value	Identity	Description
EMLSAG00000011645	0.000e+0	80.42	supercontig:LSalAtl2s:LSalAtl2s80:361178:365798:1 ...	[more]
EMLSAG00000010026	0.000e+0	36.37	supercontig:LSalAtl2s:LSalAtl2s65:53833:57281:-1 g...	[more]
EMLSAG00000008556	1.506e-92	32.26	supercontig:LSalAtl2s:LSalAtl2s527:259402:264875:-...	[more]

BLAST of dna-directed rna polymerase iii subunit rpc2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|29428029\|sp\|Q9NW08.2\|RPC2_HUMAN	0.000e+0	72.28	RecName: Full=DNA-directed RNA polymerase III subu...	[more]
gi\|51704303\|sp\|P59470.2\|RPC2_MOUSE	0.000e+0	72.10	RecName: Full=DNA-directed RNA polymerase III subu...	[more]
gi\|78099797\|sp\|P25167.2\|RPC2_DROME	0.000e+0	67.96	RecName: Full=DNA-directed RNA polymerase III subu...	[more]
gi\|1710663\|sp\|Q10233.1\|RPC2_SCHPO	0.000e+0	60.96	RecName: Full=DNA-directed RNA polymerase III subu...	[more]
gi\|2507350\|sp\|P22276.2\|RPC2_YEAST	0.000e+0	60.96	RecName: Full=DNA-directed RNA polymerase III subu...	[more]
gi\|939204604\|sp\|F4KD38.1\|NRPC2_ARATH	0.000e+0	54.53	RecName: Full=DNA-directed RNA polymerase III subu...	[more]
gi\|74852634\|sp\|Q54IZ9.1\|RPC2_DICDI	2.410e-178	59.66	RecName: Full=DNA-directed RNA polymerase III subu...	[more]
gi\|51702025\|sp\|Q8SR75.1\|RPB2_ENCCU	0.000e+0	37.47	RecName: Full=DNA-directed RNA polymerase II subun...	[more]
gi\|401012\|sp\|P30876.1\|RPB2_HUMAN	0.000e+0	38.08	RecName: Full=DNA-directed RNA polymerase II subun...	[more]
gi\|401018\|sp\|P31814.1\|RPOB_THECE	0.000e+0	38.94	RecName: Full=DNA-directed RNA polymerase subunit ...	[more]

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BLAST of dna-directed rna polymerase iii subunit rpc2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1339044336\|ref\|XP_023710255.1\|	0.000e+0	74.96	DNA-directed RNA polymerase III subunit RPC2 [Cryp...	[more]
gi\|1228004065\|ref\|XP_021933917.1\|	0.000e+0	75.78	DNA-directed RNA polymerase III subunit RPC2 [Zoot...	[more]
gi\|1316153190\|ref\|XP_023221590.1\|	0.000e+0	72.54	DNA-directed RNA polymerase III subunit RPC2-like ...	[more]
gi\|926638562\|ref\|XP_013785303.1\|	0.000e+0	72.53	DNA-directed RNA polymerase III subunit RPC2-like ...	[more]
gi\|321468089\|gb\|EFX79076.1\|	0.000e+0	72.85	hypothetical protein DAPPUDRAFT_305037 [Daphnia pu...	[more]
gi\|1000761723\|ref\|XP_015603902.1\|	0.000e+0	73.12	PREDICTED: DNA-directed RNA polymerase III subunit...	[more]
gi\|1330908469\|gb\|PNF30994.1\|	0.000e+0	74.82	DNA-directed RNA polymerase III subunit RPC2 [Cryp...	[more]
gi\|1330908468\|gb\|PNF30993.1\|	0.000e+0	74.91	DNA-directed RNA polymerase III subunit RPC2 [Cryp...	[more]
gi\|817198458\|ref\|XP_012274877.1\|	0.000e+0	73.12	DNA-directed RNA polymerase III subunit RPC2 isofo...	[more]
gi\|597773745\|ref\|XP_007250603.1\|	0.000e+0	72.33	DNA-directed RNA polymerase III subunit RPC2 [Asty...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold190_size271632	supercontig	scaffold190_size271632:90100..93519 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold190_size271632-processed-gene-1.0-mRNA-1	snap_masked-scaffold190_size271632-processed-gene-1.0-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold190_size271632:90100..93519+

gene from alignment at scaffold190_size271632:90100..93519+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold190_size271632-processed-gene-1.0 ID=snap_masked-scaffold190_size271632-processed-gene-1.0|Name=dna-directed rna polymerase iii subunit rpc2|organism=Tigriopus kingsejongensis|type=gene|length=3420bp|location=Sequence derived from alignment at scaffold190_size271632:90100..93519+ (Tigriopus kingsejongensis)
ATGGGCGAGGCCGGTCCGGCGCGGCCCAGCTGGGCCGAAGGATCCGCGGC
CAAGTTGGCTAGTCCGATCGCGGCCGTGGAGGACAAGTGGCAATTGGTGC
CGGCCTTTCTGAGCGTCCGCGGCCTCGTCCGCCAACATATTGATTCCTTC
AACTACTTCATCGCCACCGACCTCAAGAACATCGTGCGGGCCAACGAGAA
GGTCATCTCGAGCGCCGATCCGGCCTTCTACCTGAAATACCTGGACGTCC
ACGTGGGCCCGCCCCAGATCGAGGAGTCGTTCGGCGTGAGTCGGGCCACC
ACGCCCCACGAGTGTCGCCTGCGCGACATCACCTACTCGGCCCCCATCAC
GGTGGACATTGAGTACACGCGCGGGCAGCAGCGGATCATCCGGCAGGCGC
TGCCCATCGGGCAGATGCCCATCATGCTGCGCAGCGACCGCTGCATTCTC
AACGGGCGGGATCACGCCCAATTGGCCAAGGTCAACGAGTGTCCCTATGA
TCCGGGCGGCTACTTCATCACCAAGGGCCAGGAGAAGGTCATCCTCATCC
AGGAGCAGCTCTCCAAGAATCGGATGATCGTCGAGGTGGATCGCACCGGG
CAGATCACGTGCCAGGTGACCAGTTCGACCCATGGCACCAAGTCGCGGAC
CAACGTGACCACCAAAGGCGGGCGCTACTATCTCAAGCACAACTCCATGG
AGAAGGACATTCCCATCGGGGTGGTCTTCAAAGCCATGGGCGTGGTGTCC
GATCAGGAGATTGTGCAAATGGTGGGCACGGAGGATGCCATCATGACGGC
CATGGCCGCCTCCCTCGAGGAGTGCAACCGGGCCACGGTCTTCACCCAAA
ACCAGGCCCTCAAGTTCATGGCCGCCAAGATGAAGGCCCGCAAATTCTAT
AGCGGGCCCAAGAAGAGCCCCATCGACGATGTGCGCGACGTGTTGGCCGA
AACGGTTCTGGCCCATGTGCCCGTTCGGGGCTACAATTTCAAGATGAAGG
CCATCTACATGGCCCTCATGGTTCGGCGGGTCATCGAGTCGCAGAACGAC
GGCTCCATGGTGGATGACCGCGACTACTACGGGAACAAGCGCCTCGAGCT
GGCCGGCTCCCTGCTCTCGCTCCTCTTCGAGGATCTCTTCAAGCGGCTCA
ATTGGGAGCTCAAGCAGATTGCCGACCGCAACATCCCGCGCGTCAAGGCC
GCTCAGTTTGACATCGTCAAGCACATCCGCTGCGATCTCATCACCATCGG
CCTCGAGAACGCCATCTCGAGTGGGAACTGGACCATCAAGCGCTTCCGCA
TGGAGCGACAGGGTGTGACCCAGGTCCTCTCGCGGCTCAGCTACATCTCC
GCCCTGGGCATGATGACGCGGGTCAACTCGCAGTTCGAGAAGACCCGCAA
GGTGAGCGGACCGCGCTCCTTGCAGCCCAGTCAGTGGGGCATGCTGTGCC
CTTCGGACACGCCCGAGGGCGAGTCCTGCGGGCTGGTCAAGAACTTGGCT
CTCATGACGCATATCACGACGGAGAGTGAAGAGGCCCCCATCGTGCGCCT
GGGCTTCAATGTGGGCGTCGAGGACATTCATCTCTTGTCCGGCGAGGAGC
TGAGCAATCCGCGCATCTTCACCGTTTTCCTCAACGGTGGGATCCTGGGC
GTGGTCAAGAACTACTCCAAGCTCATTCGGATCTTTCGAGCGGCCCGCCG
GATGGGCTTCATCAATGGCTTCGTTTCCATCTACCCCCACCACACCACCC
GCTGTGTCTACATCAGTGCGGATGGAGGCCGTCTGTGTCGGCCCTACATC
ATCGTGAGCGGTGGTCAGTCCCTGGTGCTGGAGGAGCACATCAAGCTCCT
CATGGCCGGGCAATTGGTGTTTGACGACTTCCTCCGGAAGGGCCTGGTCG
AGTACTTGGACGTCAACGAGGAGAATGATAGCAACATTGCCCTCTACGAG
GTGGATATGACGGCGAGCACCACTCACCTGGAGATTGAGCCCTTCACCCT
CTTGGGCGTGTGCGCGGGTCTCATCCCGTATCCCCACCATAACCAGTCGC
CCCGAAACACCTACCAATGTGCCATGGGTAAGCAGGCCATGGGCACGATT
GCTCTCAACCAAAGGAACCGCATCGACACGCTGCTCTACAATCTGGTGTA
CCCAATGCGACCCATGGTCAAGTCGAGGACCATCGAGCTCATCAATTTCG
AGGAGATGCCCGCCGGTCAGAATGCCATCGTGGCGGTGATGAGCTACTCT
GGCTACGACATCGAGGACGCCATCATCCTGAACCGGGCCTCCTTGGATCG
GGGCTACGGTCGCTGTCTCGTGTACCGGAACCAAAAGGCAATTCTGAAGC
GCTACGCCAATCAGACCTACGACAGGGTCATGGGACCCTTGGTCGATGCA
GAGACGCAAAAACAGATCTGGAAGCACGATGTCCTCGACGCGGATGGCAT
CGGCTCGCCGGGGATGAAGGTGGATAATCGGCAAGTCTTGGTCAACAAGT
CCATGCCCGCCATCACTCGAGGCGACGCTCTCAACCCCATGGAGACCCAA
CCGCGCCAGCCCGAGTATCGGGACACGCCCAACGTTTACAAGGGACCCAT
TCCCTCGTTCATCGAGCGGGTCATGATCTCGTCGAATGCGGACGATGCCT
TCCTCATCAAGATCCTGCTGCGGCAAACCAGGCGGCCCGAGCTGGGCGAC
AAGTTCAGCTCCCGCCACGGGCAGAAGGGTGTGACCGGTCTGATCGTGCA
GCAAGAGGACATGCCCTTCAACGAGCAGGGGATCTGTCCGGACATGATCA
TGAACCCGCACGGTTTTCCCTCCCGTATGACTGTGGGCAAGCTCATGGAG
CTACTAGGCGGGAAGGCCGGGGTGCTGGAGGGCAAGTTCCACTACGGCAC
AGCCTTTGGCGGCTCCAAGGTGTCGGACATCAGTGAGGAACTGGTGCGCA
ACGGCTTCAACTACCAAGGCAAGGACGTGCTCACGTCGGGGATCACGGGC
GAGCCGCTCCAGGCCTACATTTATCACGGGCCCGTCTATTACCAGAAGCT
CAAGCACATGGTCCTGGACAAGATGCACGGGCGAGCCCGTGGGCCCCGAG
CCGTCCTCACCCGCCAGCCCACCGAGGGTCGCTCTCGCGAGGGCGGCCTC
CGTCTGGGAGAGATGGAGCGGGACTGTCTGATCGCGTATGGGGCCAGCAT
GCTCTTGGTGGAGCGTCTCATGATCTCCTCAGATGCCTTCGACGTGGATG
TGTGCAATGGCTGCGGTCTGCTGGGCTACTCGGGTTGGTGCACCAACTGC
AAGTCGTCCAAGTCCGTGTCCTCCATTCGCATTCCCTACGCCTGCAAGTT
GCTCTTCCAGGAGCTCCAAGCCATGAACATTGTGCCTCGCCTCAAGCTCG
AGAAATACTGTGATGATTGA

Synonyms

The feature 'dna-directed rna polymerase iii subunit rpc2' has the following synonyms


Synonym
Tk12376

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