hypothetical protein DAPPUDRAFT_215551, snap_masked-scaffold1912_size25034-processed-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. L. salmonis genes
Match: EMLSAG00000001138 (supercontig:LSalAtl2s:LSalAtl2s118:399399:402184:1 gene:EMLSAG00000001138 transcript:EMLSAT00000001138 description:"maker-LSalAtl2s118-augustus-gene-4.15") HSP 1 Score: 66.6254 bits (161), Expect = 9.489e-15 Identity = 38/64 (59.38%), Postives = 43/64 (67.19%), Query Frame = 0 Query: 59 AVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 A+V+QVLDELGLQLN L VP G +A PG K+ + A GG DADADLQ RLD LRRE Sbjct: 162 AIVSQVLDELGLQLNDQLKD--VPAGXSTLAAPGAKEK-KAVAAGGVEDADADLQERLDALRRE 222
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. SwissProt
Match: gi|73917738|sp|Q7ZW25.1|CHM2A_DANRE (RecName: Full=Charged multivesicular body protein 2a; AltName: Full=Chromatin-modifying protein 2a; Short=CHMP2a) HSP 1 Score: 52.7582 bits (125), Expect = 2.975e-8 Identity = 41/71 (57.75%), Postives = 52/71 (73.24%), Query Frame = 0 Query: 51 EDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRR 121 EDDEEESDAVV+QVLDELGL L+ +L+ + GSL+VA GK+A P + DADADL+ RL++LRR Sbjct: 154 EDDEEESDAVVSQVLDELGLTLSDELSNLPATGGSLSVA--AGKKAEPQPTLA---DADADLEERLNNLRR 219
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. SwissProt
Match: gi|75206464|sp|Q9SKI2.2|VPS2A_ARATH (RecName: Full=Vacuolar protein sorting-associated protein 2 homolog 1; Short=AtVPS2-1; AltName: Full=Charged multivesicular body protein 2 homolog 1; AltName: Full=ESCRT-III complex subunit VPS2 homolog 1; AltName: Full=SNF7-like protein) HSP 1 Score: 52.7582 bits (125), Expect = 3.390e-8 Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 0 Query: 60 VVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDA---DADLQARLDDLRR 121 +V+QVLDE+G+ +NQ+L P+G AVA P K V GA D+ D+DLQARLD+LR+ Sbjct: 164 LVSQVLDEIGIDINQELVN--APSG--AVAVPAAKNKVVQAEATGAEDSGGIDSDLQARLDNLRK 224
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|1022764203|gb|KZS09680.1| (Charged multivesicular body protein 2A [Daphnia magna]) HSP 1 Score: 89.3521 bits (220), Expect = 1.729e-19 Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLA----VATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDAMG+E DEEESDAVV+QVLDELGLQL L G+ + +GSLA V GG QA + A GG DADADLQARL++LRRE Sbjct: 148 DDAMGDEADEEESDAVVSQVLDELGLQLTDQLTGLPIASGSLASTTGVTIKGGPQA-AAAAAGGTVDADADLQARLNNLRRE 228
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|913331423|ref|XP_013197285.1| (PREDICTED: charged multivesicular body protein 2a [Amyelois transitella]) HSP 1 Score: 87.0409 bits (214), Expect = 1.551e-18 Identity = 48/80 (60.00%), Postives = 62/80 (77.50%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVP-SGAVG-GATDADADLQARLDDLRRE 122 D+AM + DEEESDAVV+Q+LDELGLQLN L+G+ GSL+++T G VP +GA G G +DADA+LQ+RLD+LRRE Sbjct: 148 DEAMEGDADEEESDAVVSQILDELGLQLNDQLSGLPQATGSLSISTKAGPAGVPVAGASGAGLSDADAELQSRLDNLRRE 227
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|321462372|gb|EFX73396.1| (hypothetical protein DAPPUDRAFT_215551 [Daphnia pulex]) HSP 1 Score: 80.4925 bits (197), Expect = 4.308e-16 Identity = 50/81 (61.73%), Postives = 58/81 (71.60%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVAT---PGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDAMG+E DEEESDAVV+QVLDELGLQL L G+ + +GSLA T G + A GG DADADLQARL++LRRE Sbjct: 148 DDAMGDEADEEESDAVVSQVLDELGLQLTDQLTGLPIASGSLASTTGIAAKGGPQAAAAAAGGTIDADADLQARLNNLRRE 228
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|1276840131|gb|PIO68587.1| (SNF7 family protein [Teladorsagia circumcincta]) HSP 1 Score: 78.5666 bits (192), Expect = 4.706e-16 Identity = 41/78 (52.56%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDA+G+E D+ ES+ +VNQVLDELG+Q+ +++AG+ G + V+T G++ A GG TD D DLQARLD LRRE Sbjct: 65 DDALGDETDDAESEQIVNQVLDELGIQIGEEMAGLPTAGGQIGVST--GERTKQPVAAGGGTDIDDDLQARLDQLRRE 140
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|1061471268|gb|ODM90329.1| (Charged multivesicular body protein 2a [Orchesella cincta]) HSP 1 Score: 79.7221 bits (195), Expect = 9.127e-16 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDA+G+ED EEESDAVV Q+LDELGLQL L+G+ P+ S +A P ++ V +D+DADLQARLD+LRRE Sbjct: 148 DDALGDEDAEEESDAVVTQILDELGLQLKDQLSGL--PSASGNLANPSQREPV----AAAVSDSDADLQARLDNLRRE 219
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|734543659|gb|KHN72592.1| (Charged multivesicular body protein 2a [Toxocara canis]) HSP 1 Score: 78.9518 bits (193), Expect = 1.704e-15 Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDA+ +E DEEES+A+V QVLDELG+Q+N++L + +G+LA P + PS A+ +DADADLQARL++LRRE Sbjct: 148 DDAIADEGDEEESEAIVTQVLDELGIQMNEELGALPTAHGTLA---PAEDKKQPSAAL---SDADADLQARLENLRRE 219
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|560119134|emb|CDJ96210.1| (Snf7 domain containing protein [Haemonchus contortus]) HSP 1 Score: 78.5666 bits (192), Expect = 2.618e-15 Identity = 41/78 (52.56%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDA+G+E D+ ES+ +VNQVLDELG+Q+ +++AG+ G + V+T G++A A GG D D DLQARLD LRRE Sbjct: 148 DDALGDETDDAESEQIVNQVLDELGIQMGEEMAGLPTTGGQIGVST--GERAKQPVAAGGGNDIDDDLQARLDQLRRE 223
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|961124330|ref|XP_014783653.1| (PREDICTED: charged multivesicular body protein 2a-like [Octopus bimaculoides] >gi|918296525|gb|KOF72590.1| hypothetical protein OCBIM_22039236mg [Octopus bimaculoides]) HSP 1 Score: 77.7962 bits (190), Expect = 4.736e-15 Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDAMGE DDEEE+DA+V QVLDELGLQ++++L+G+ +G+LA PG KQ A G DADADL+ARL++LRR+ Sbjct: 148 DDAMGE-DDEEETDAIVAQVLDELGLQMSEELSGLPSASGTLA---PGTKQQ-AQAAAAGVNDADADLEARLENLRRQ 220
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|1274117525|ref|XP_022823896.1| (charged multivesicular body protein 2a [Spodoptera litura] >gi|1274117527|ref|XP_022823897.1| charged multivesicular body protein 2a [Spodoptera litura]) HSP 1 Score: 77.411 bits (189), Expect = 8.064e-15 Identity = 46/84 (54.76%), Postives = 55/84 (65.48%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPG------GKQAVPSGAVGGATDADADLQARLDDLRRE 122 D+AM +DDEEESD VV+Q+LDELGLQLN L+G+ GSL+VA G G TDADA+LQARLD+LRRE Sbjct: 148 DEAMAADDDEEESDQVVSQILDELGLQLNDTLSGLPQATGSLSVAAKNPAAPAVAVAGGSGGGGAGVTDADAELQARLDNLRRE 231
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|431921414|gb|ELK18813.1| (Charged multivesicular body protein 2a [Pteropus alecto]) HSP 1 Score: 77.0258 bits (188), Expect = 9.237e-15 Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = 0 Query: 45 DDAMGEEDDEEE-----SDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRR 121 DDAMG+EDDEEE SDAVV+QVLDELGL L +L+ + GSL+VAT GGK+A + + DADADL+ RL +LRR Sbjct: 148 DDAMGDEDDEEERFGRTSDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAT-GGKKAEAAASASALVDADADLEERLKNLRR 228 The following BLAST results are available for this feature:
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1912_size25034:13034..17578- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1912_size25034-processed-gene-0.4 ID=snap_masked-scaffold1912_size25034-processed-gene-0.4|Name=hypothetical protein DAPPUDRAFT_215551|organism=Tigriopus kingsejongensis|type=gene|length=4545bp|location=Sequence derived from alignment at scaffold1912_size25034:13034..17578- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hypothetical protein DAPPUDRAFT_215551' has the following synonyms
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