cell adhesion molecule 3 precursor, snap_masked-scaffold208_size258758-processed-gene-0.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Match: EMLSAG00000001948 (supercontig:LSalAtl2s:LSalAtl2s1341:36447:42250:-1 gene:EMLSAG00000001948 transcript:EMLSAT00000001948 description:"maker-LSalAtl2s1341-snap-gene-0.22") HSP 1 Score: 98.2117 bits (243), Expect = 2.243e-27 Identity = 54/134 (40.30%), Postives = 72/134 (53.73%), Query Frame = 0 Query: 16 LPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHASVEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIEDGVIQGMSKGSSHQIETIRLPEALKRERSEVFVVPLVSSGSTI 149 LP+ P+ISGG +YQ+GE+LELNCTSPR++PPT L W+LNGQ+ +S +G+SH+IET+ LPEALK+ER+EVFVVPL++ GS I Sbjct: 1 LPEEGPIISGGRAEYQLGEQLELNCTSPRTFPPTNLHWYLNGQKGSS----------------------------------------------------QGNSHEIETLLLPEALKKERTEVFVVPLINVGSGI 82
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Match: EMLSAG00000010864 (supercontig:LSalAtl2s:LSalAtl2s722:19599:190212:-1 gene:EMLSAG00000010864 transcript:EMLSAT00000010864 description:"maker-LSalAtl2s722-snap-gene-1.8") HSP 1 Score: 82.8037 bits (203), Expect = 6.541e-20 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 0 Query: 7 EEYFISLMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEH--ASVEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEI 105 ++ +++++LP P+I+GG +Y IG+R+E+NCTS RS P KLKW++NG++ A F L + KNGL S +GL V F G ++++C I Sbjct: 131 QDAILAVIDLPDDGPIITGGFPRYHIGDRVEVNCTSYRSKPAAKLKWYINGEQADPAFTHHFKL-IKDKNGLETSVLGLRFKVREKHFHKGDLKLKCTATI 230
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Match: EMLSAG00000007638 (supercontig:LSalAtl2s:LSalAtl2s442:555696:556660:-1 gene:EMLSAG00000007638 transcript:EMLSAT00000007638 description:"snap_masked-LSalAtl2s442-processed-gene-5.4") HSP 1 Score: 73.559 bits (179), Expect = 1.316e-16 Identity = 44/134 (32.84%), Postives = 73/134 (54.48%), Query Frame = 0 Query: 11 ISLMELPKSDPVISG-GLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHAS--VEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIEDGVIQGMSKGSSHQIETIRLPE-ALKRERSEVFVV 140 + +++LP S+P+ISG Y++G L +NCTSP S P KL W++N ++ S + ++ M GLY S IGL+ + R F +G + ++C ++ Q + S I I L E AL+ + VF++ Sbjct: 105 MEILDLPDSEPIISGINASGYKVGSWLNVNCTSPNSKPAAKLNWYINNEQVNSLYLADYSPSMNEHTGLYTSFIGLSFKLKRQHFIHGVVTLKCTSKL----FQHYFESSEKLITGIGLGEKALESRANVVFLI 234
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Match: EMLSAG00000003689 (supercontig:LSalAtl2s:LSalAtl2s1:1730505:1794660:1 gene:EMLSAG00000003689 transcript:EMLSAT00000003689 description:"augustus_masked-LSalAtl2s1-processed-gene-18.0") HSP 1 Score: 70.4774 bits (171), Expect = 3.602e-15 Identity = 37/92 (40.22%), Postives = 52/92 (56.52%), Query Frame = 0 Query: 17 PKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHASVEEFPL--RMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIE 106 PK P I G Y+ G+ +E+NCTS S P KL WF+NG+ S PL S+ GL SR+GL + F++G++R+ C+ EIE Sbjct: 133 PKFPPKIKGINSSYRSGDLVEINCTSSDSKPAAKLTWFMNGEPIQSNYALPLIKEFDSETGLETSRLGLRFVAEDHHFQHGEMRLTCLAEIE 224
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Match: EMLSAG00000005472 (supercontig:LSalAtl2s:LSalAtl2s294:325441:341252:1 gene:EMLSAG00000005472 transcript:EMLSAT00000005472 description:"maker-LSalAtl2s294-augustus-gene-4.24") HSP 1 Score: 67.0106 bits (162), Expect = 6.405e-14 Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 0 Query: 15 ELPKSDPVISGG--LRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHASVEEFPLR----MGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEI 105 ELPK P I GG R Y+ G+ L L CTS S PP KL+W LNG+E ++EF + + GL+ S IGL + + + F+ G++RI C G I Sbjct: 151 ELPKQLPTILGGEIKRTYKPGDFLNLTCTSAPSNPPAKLQWILNGRE---IDEFFVEEQYLLNKHRGLFSSVIGLMLPLDESHFENGELRIRCRGTI 244
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Match: EMLSAG00000006053 (supercontig:LSalAtl2s:LSalAtl2s327:471330:485507:1 gene:EMLSAG00000006053 transcript:EMLSAT00000006053 description:"maker-LSalAtl2s327-snap-gene-4.46") HSP 1 Score: 60.8474 bits (146), Expect = 1.173e-12 Identity = 32/98 (32.65%), Postives = 52/98 (53.06%), Query Frame = 0 Query: 13 LMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHASV--EEFPLRMGSKNGLYRSRIGLNVTVHRNLF---KYGKIRIECVGEI 105 L++ P+ P I +QYQ+GE L CT+ +S PPT L W++NG+ + V FP R G + +GL+ + + F K K+ ++C+ I Sbjct: 2 LIDFPREGPTIESPRKQYQVGETAHLTCTAHQSSPPTSLAWYINGEPASEVYLRRFPTREG------KQILGLSFPITGSHFVSQKKNKVSLKCLASI 93
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Match: EMLSAG00000008718 (supercontig:LSalAtl2s:LSalAtl2s53:973559:992430:-1 gene:EMLSAG00000008718 transcript:EMLSAT00000008718 description:"augustus_masked-LSalAtl2s53-processed-gene-10.2") HSP 1 Score: 61.2326 bits (147), Expect = 5.571e-12 Identity = 36/124 (29.03%), Postives = 63/124 (50.81%), Query Frame = 0 Query: 16 LPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQ--EHASVEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIEDGVIQGMSKGSSHQIETIRLPEALKRERSEV 137 +P + P I GG +Y+ G+ + +NCTS +S P L W +NG+ + + +P+ + +GL+ S +GL+ V R+ F G ++++C I S + R E LKR+R+ Sbjct: 121 IPSNGPKIHGGKVRYRPGDAVNVNCTSRKSKPAANLDWSINGEPANDSMLVHYPIH-NTSHGLHTSTLGLSFKVLRDHFHNGDMKLKCTATI----------ASIYWKSNERSAEGLKRKRNSA 233
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Match: EMLSAG00000008399 (supercontig:LSalAtl2s:LSalAtl2s513:217857:265280:-1 gene:EMLSAG00000008399 transcript:EMLSAT00000008399 description:"maker-LSalAtl2s513-augustus-gene-4.4") HSP 1 Score: 54.6842 bits (130), Expect = 8.893e-10 Identity = 26/83 (31.33%), Postives = 47/83 (56.63%), Query Frame = 0 Query: 25 GGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQ--EHASVEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEI 105 GG +Y+IG+ + ++CTS S P +L W++NG+ + + +P N L S++GL VH+ FK+ ++++C I Sbjct: 100 GGQPRYRIGDWVNVSCTSRNSLPAAQLAWYINGEKADKQYLTSYP-EEEHHNSLRSSKLGLMFKVHQKHFKHNDLKLKCTATI 181
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Match: EMLSAG00000002653 (supercontig:LSalAtl2s:LSalAtl2s153:1109508:1222125:-1 gene:EMLSAG00000002653 transcript:EMLSAT00000002653 description:"maker-LSalAtl2s153-augustus-gene-11.4") HSP 1 Score: 54.6842 bits (130), Expect = 1.453e-9 Identity = 27/95 (28.42%), Postives = 52/95 (54.74%), Query Frame = 0 Query: 13 LMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQ--EHASVEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEI 105 +++LP P I+G +Y+IG+ + CTS +S+PP L WF+NG+ + + LR +G Y + +G++ V R + ++++C + Sbjct: 137 VIDLPDERPRITGVKDKYRIGDTITATCTSWQSHPPANLTWFINGEPARGGYLRRYDLR-KEYDGTYTTVLGMHFEVLRQHMRNRVLKLKCTSTL 230
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Match: EMLSAG00000000263 (supercontig:LSalAtl2s:LSalAtl2s103:645619:649421:1 gene:EMLSAG00000000263 transcript:EMLSAT00000000263 description:"maker-LSalAtl2s103-snap-gene-6.7") HSP 1 Score: 48.9062 bits (115), Expect = 1.434e-7 Identity = 25/97 (25.77%), Postives = 48/97 (49.48%), Query Frame = 0 Query: 10 FISLMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHASVEEFPLRMGSKN-GLYRSRIGLNVTVHRNLFKYGKIRIECVGEI 105 +++++ P P + G YQ+GE+L + C+ ++P + WF+NG +F ++N GL S L++ + F G++ +CV I Sbjct: 124 YLTVLVQPADRPEVIGFKNTYQVGEKLNMTCSLKNTFPSANITWFINGNRGLGFIKFYSTSTAQNSGLITSTSVLSLHLQPMHFPNGRLTGKCVASI 220
BLAST of cell adhesion molecule 3 precursor vs. nr
Match: gi|1325275207|ref|XP_023322275.1| (uncharacterized protein LOC111696780 [Eurytemora affinis]) HSP 1 Score: 103.99 bits (258), Expect = 5.306e-25 Identity = 52/154 (33.77%), Postives = 84/154 (54.55%), Query Frame = 0 Query: 11 ISLMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHASVEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIEDGVIQG--MSKGSSHQIETIRLPEALKRERSEVFVVPLVSSGSTIPSSGLFILLACLV 162 + ++E+PK PVI GG Y G+ L L CTS SYPPT L W+LNG + S ++ + ++ LY + L V +LF+YG+IR++CV E+ + I+ + G + ++LPEA+K +F VP+ +G + S + L+ Sbjct: 1 MQVVEIPKEPPVIGGGAAYYANGDELNLTCTSNPSYPPTTLTWYLNGNKVGSSKDDEALLKREDDLYITTSFLRTKVQNSLFRYGEIRVKCVAELTEEPIKARIQAPGDGFHLNILKLPEAMKLSTETIFDVPMFGAGRILSSWCFLCIFFSLI 154
BLAST of cell adhesion molecule 3 precursor vs. nr
Match: gi|1108469110|emb|CRL02803.1| (CLUMA_CG015858, isoform A [Clunio marinus]) HSP 1 Score: 83.9593 bits (206), Expect = 4.249e-16 Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 0 Query: 16 LPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHAS---VEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIE 106 LP++DP I+GG +YQI +R+ +NCTS RS P KL WF+NGQ HA+ V+++ + GL ++ +GL V + FK+G ++++C+G IE Sbjct: 127 LPETDPRITGGRARYQINDRVNVNCTSGRSKPAVKLTWFINGQ-HANPEYVKQYRTAKTGREGLEQTILGLRFRVRQEHFKHGDMKLKCLGVIE 219
BLAST of cell adhesion molecule 3 precursor vs. nr
Match: gi|225712892|gb|ACO12292.1| (Cell adhesion molecule 3 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 83.1889 bits (204), Expect = 4.350e-16 Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 0 Query: 7 EEYFISLMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEH--ASVEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEI 105 ++ +++++LP P+I+GG +Y+IG+R+E+NCTS RS P KLKW++NG++ A F L + KNGL S +GL V F G ++++C I Sbjct: 131 QDAILAVIDLPDDGPIITGGFPRYRIGDRVEVNCTSYRSKPAAKLKWYINGEQADPAFTHRFKL-IKDKNGLETSVLGLRFKVREKHFHKGDLKLKCTATI 230
BLAST of cell adhesion molecule 3 precursor vs. nr
Match: gi|1101344060|ref|XP_018897727.1| (PREDICTED: cell adhesion molecule 2-like [Bemisia tabaci] >gi|1101344062|ref|XP_018897728.1| PREDICTED: cell adhesion molecule 2-like [Bemisia tabaci]) HSP 1 Score: 80.1073 bits (196), Expect = 1.121e-14 Identity = 40/113 (35.40%), Postives = 70/113 (61.95%), Query Frame = 0 Query: 6 QEEYFISLMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHA--SVEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIEDGVIQGMSKG 116 Q E + ++ LP+ P ISG + YQIG+ + LNCTS +SYP ++L W++N Q+ S+ +P + S +GL ++++GL +TV +LF+ G I+ +C+ + + Q +G Sbjct: 139 QGEGRLEVIFLPRDKPHISGKRQYYQIGDEINLNCTSGKSYPASELHWYINDQKVKGPSLRSYP-EIISSHGLRQTQLGLTLTVTNDLFRDGSIKFKCIATLSPSLWQAKQEG 250
BLAST of cell adhesion molecule 3 precursor vs. nr
Match: gi|1022775364|gb|KZS19236.1| (Uncharacterized protein APZ42_014388 [Daphnia magna]) HSP 1 Score: 77.7962 bits (190), Expect = 8.504e-14 Identity = 35/97 (36.08%), Postives = 64/97 (65.98%), Query Frame = 0 Query: 11 ISLMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQ--EHASVEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEI 105 +++++LP+ PVISGG +Y +G++++LNCTS RS P T L W++NG+ E ++ FP+ + +GL S +GL+ T+ F+ G ++++C + Sbjct: 135 MTVVQLPQRGPVISGGKPRYSVGDQVDLNCTSMRSSPATNLTWYINGEPAERHHLQVFPI-VEDIDGLETSMLGLHFTIKTRHFRKGDLKLKCTATL 230
BLAST of cell adhesion molecule 3 precursor vs. nr
Match: gi|1325259338|ref|XP_023327713.1| (uncharacterized protein LOC111700878 [Eurytemora affinis]) HSP 1 Score: 77.411 bits (189), Expect = 9.302e-14 Identity = 40/102 (39.22%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 11 ISLMELPKSDPVIS--GGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQ----EHASVEEFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIE 106 ++++ELPK P I+ G++QY++G+ L+LNCTS S P LKW +N + +H E + G + LY SRIGL + + N F +GK+++ C+GEI+ Sbjct: 129 MTVIELPKKAPTITTINGIKQYEVGDMLQLNCTSEPSNPAADLKWEINKELVPDQHYIFNE-QIVHGREGKLYVSRIGLQIRLSPNHFHWGKLKVACIGEIK 229
BLAST of cell adhesion molecule 3 precursor vs. nr
Match: gi|1133423941|ref|XP_019867690.1| (PREDICTED: uncharacterized protein LOC109596567 [Aethina tumida]) HSP 1 Score: 77.0258 bits (188), Expect = 1.171e-13 Identity = 40/110 (36.36%), Postives = 66/110 (60.00%), Query Frame = 0 Query: 6 QEEYFISLMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHASVE---EFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIEDGVIQG 112 Q E + ++ LP+ DPVI+G L QYQIG+ + LNCTS +S+P + L W++N Q+ + E ++P K GL S +GL T+ F G ++++CV + +++G Sbjct: 129 QSEARMEVVSLPQEDPVITGVLMQYQIGDVINLNCTSGKSHPASVLHWYINEQQIQTPEALIQYPPD-HHKQGLVSSTLGLKFTLSSRHFLGGSMKVKCVASVAPILMRG 237
BLAST of cell adhesion molecule 3 precursor vs. nr
Match: gi|1133446402|ref|XP_019879786.1| (PREDICTED: uncharacterized protein LOC109607755 [Aethina tumida]) HSP 1 Score: 74.3294 bits (181), Expect = 1.338e-13 Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = 0 Query: 16 LPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHASVE---EFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIEDGVIQG 112 LP+ DPVI+G L QYQIG+ + LNCTS +S+P + L W++N Q+ + E ++P K GL S +GL T+ F G ++++CV + +++G Sbjct: 14 LPQEDPVITGVLMQYQIGDVINLNCTSGKSHPASVLHWYINEQQIQTPEALIQYPPD-HHKQGLVSSTLGLKFTLSSRHFLGGSMKVKCVASVAPILMRG 112
BLAST of cell adhesion molecule 3 precursor vs. nr
Match: gi|1080060363|ref|XP_018572117.1| (uncharacterized protein LOC108911623 [Anoplophora glabripennis]) HSP 1 Score: 76.2554 bits (186), Expect = 2.363e-13 Identity = 39/103 (37.86%), Postives = 64/103 (62.14%), Query Frame = 0 Query: 6 QEEYFISLMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHASVE---EFPLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEI 105 Q E + ++ LP+ +PVI+G QYQIG+ + LNCTS +SYP + L W++N Q+ E E+PL ++ GL + +GL+ + + F+ G +R++CV I Sbjct: 137 QSEARMEVVYLPQENPVITGVEMQYQIGDEINLNCTSGKSYPASILHWYINEQQIQKPEALIEYPLYHHAQ-GLVSATLGLHFKLSNHHFRGGSMRVKCVASI 238
BLAST of cell adhesion molecule 3 precursor vs. nr
Match: gi|1233167112|ref|XP_022185544.1| (cell adhesion molecule 1-like [Nilaparvata lugens]) HSP 1 Score: 76.2554 bits (186), Expect = 2.500e-13 Identity = 51/153 (33.33%), Postives = 82/153 (53.59%), Query Frame = 0 Query: 6 QEEYFISLMELPKSDPVISGGLRQYQIGERLELNCTSPRSYPPTKLKWFLNGQEHASVEEF--PLRMGSKNGLYRSRIGLNVTVHRNLFKYGKIRIECVGEIEDGVIQGMSKGSSHQIETIRLPEALKRERSEVFVVPLVSSGSTIPSSGLFI 156 Q E + ++ LP S P+I+G +QYQIG+ + LNCTS +S+P + L WF+N Q+ ++ + ++GL S +GL + V + F+ G +R+ CV + + QG K S Q R P + R + +V +SGS+ S FI Sbjct: 128 QSEGRMEVLFLPTSGPLITGEEKQYQIGDEINLNCTSGKSFPASVLHWFINDQKVSNSRNLIHHKELVHQHGLVTSSLGLRLPVTTDHFRNGSMRVRCVASLSPVLWQG-DKESVVQ----RSPLPVYENREALLLVR--ASGSSFVPSANFI 273 The following BLAST results are available for this feature:
BLAST of cell adhesion molecule 3 precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 10
BLAST of cell adhesion molecule 3 precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of cell adhesion molecule 3 precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold208_size258758:64269..75703- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold208_size258758-processed-gene-0.14 ID=snap_masked-scaffold208_size258758-processed-gene-0.14|Name=cell adhesion molecule 3 precursor|organism=Tigriopus kingsejongensis|type=gene|length=11435bp|location=Sequence derived from alignment at scaffold208_size258758:64269..75703- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cell adhesion molecule 3 precursor' has the following synonyms
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