nadh dehydrogenase subunit e, snap_masked-scaffold3970_size7010-processed-gene-0.1 (gene) Tigriopus kingsejongensis

Overview
Namenadh dehydrogenase subunit e
Unique Namesnap_masked-scaffold3970_size7010-processed-gene-0.1
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of nadh dehydrogenase subunit e vs. L. salmonis genes
Match: EMLSAG00000000666 (supercontig:LSalAtl2s:LSalAtl2s1105:6692:7651:-1 gene:EMLSAG00000000666 transcript:EMLSAT00000000666 description:"maker-LSalAtl2s1105-augustus-gene-0.31")

HSP 1 Score: 62.003 bits (149), Expect = 6.850e-12
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLT 51
            M QI  DYYEDLT   + EI++EL  G  P  GP++ RYAAEP  G TSLT
Sbjct:  176 MVQINDDYYEDLTVKDMDEILNELKVGTKPARGPRSSRYAAEPFGGPTSLT 226
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Match: gi|266652|sp|P29914.1|NQO2_PARDE (RecName: Full=NADH-quinone oxidoreductase chain 2; AltName: Full=NADH dehydrogenase I, chain 2; AltName: Full=NDH-1, chain 2)

HSP 1 Score: 112.464 bits (280), Expect = 4.194e-29
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWI 89
            MAQIGKD+YEDLT  +L+ +ID  AAG+VP PGPQNGR++AE L G T+L A   G   +NASV  A  +GD++KRIDGTEVP+ TPW+
Sbjct:  146 MAQIGKDFYEDLTVEKLAALIDRFAAGEVPVPGPQNGRFSAEALGGPTAL-ADLKGGEAHNASVARALRLGDSIKRIDGTEVPITTPWL 233
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Match: gi|122064988|sp|Q28Q15.1|RL21_JANSC (RecName: Full=50S ribosomal protein L21)

HSP 1 Score: 102.449 bits (254), Expect = 3.809e-25
Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 0 
Query:  171 LTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFAQE 243
            L AAR   ADDLK+ISGVGPKLEG+LN+ G YHFDQI  W  +EI ++D++L FKGRI RD+WI QA AFA E
Sbjct:  184 LDAARDGKADDLKKISGVGPKLEGLLNENGVYHFDQIMAWGPSEIAYMDDKLSFKGRIERDNWIEQATAFAAE 256
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Match: gi|115502497|sp|Q0MQI9.1|NDUV2_PANTR (RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial; AltName: Full=NADH-ubiquinone oxidoreductase 24 kDa subunit; Flags: Precursor)

HSP 1 Score: 75.0998 bits (183), Expect = 5.443e-15
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLT 51
            M QI  +YYEDLTA  + EIIDEL AGK+P PGP++GR++ EP  GLTSLT
Sbjct:  185 MVQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLT 235
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Match: gi|20455499|sp|P19404.2|NDUV2_HUMAN (RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial; AltName: Full=NADH-ubiquinone oxidoreductase 24 kDa subunit; Flags: Precursor)

HSP 1 Score: 75.0998 bits (183), Expect = 5.724e-15
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLT 51
            M QI  +YYEDLTA  + EIIDEL AGK+P PGP++GR++ EP  GLTSLT
Sbjct:  185 MVQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLT 235
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Match: gi|115502496|sp|Q0MQI8.1|NDUV2_GORGO (RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial; AltName: Full=NADH-ubiquinone oxidoreductase 24 kDa subunit; Flags: Precursor >gi|115502498|sp|Q0MQI7.1|NDUV2_PONPY RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial; AltName: Full=NADH-ubiquinone oxidoreductase 24 kDa subunit; Flags: Precursor)

HSP 1 Score: 75.0998 bits (183), Expect = 5.782e-15
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLT 51
            M QI  +YYEDLTA  + EIIDEL AGK+P PGP++GR++ EP  GLTSLT
Sbjct:  185 MVQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLT 235
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Match: gi|83305118|sp|P19234.2|NDUV2_RAT (RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial; AltName: Full=NADH-ubiquinone oxidoreductase 24 kDa subunit; Flags: Precursor)

HSP 1 Score: 74.7146 bits (182), Expect = 7.261e-15
Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLT 51
            M QI  DYYEDLT   + EIIDEL AGKVP PGP++GR+  EP  GLTSLT
Sbjct:  184 MVQINDDYYEDLTPKDIEEIIDELRAGKVPKPGPRSGRFCCEPAGGLTSLT 234
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Match: gi|146345463|sp|Q9D6J6.2|NDUV2_MOUSE (RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial; AltName: Full=NADH-ubiquinone oxidoreductase 24 kDa subunit; Flags: Precursor)

HSP 1 Score: 73.559 bits (179), Expect = 2.026e-14
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLT 51
            M QI  +YYEDLT   + EIIDEL AGKVP PGP++GR+  EP  GLTSLT
Sbjct:  184 MVQINDNYYEDLTPKDIEEIIDELKAGKVPKPGPRSGRFCCEPAGGLTSLT 234
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Match: gi|128865|sp|P04394.3|NDUV2_BOVIN (RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial; AltName: Full=NADH dehydrogenase subunit II; AltName: Full=NADH-ubiquinone oxidoreductase 24 kDa subunit; Flags: Precursor)

HSP 1 Score: 73.1738 bits (178), Expect = 2.890e-14
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLT 51
            M QI  +YYEDLT   + EIIDEL AGK+P PGP++GR++ EP  GLTSLT
Sbjct:  185 MVQINDNYYEDLTPKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLT 235
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Match: gi|122069609|sp|Q165Y2.2|RL21_ROSDO (RecName: Full=50S ribosomal protein L21)

HSP 1 Score: 68.9366 bits (167), Expect = 5.870e-13
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0 
Query:  180 DDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFAQ 242
            DDLK++SGVGP LE  L + G   F QIA WT A++  +D +L FKGRI R+ WI QAK  A+
Sbjct:  153 DDLKKLSGVGPALEKKLIEGGVTSFAQIAAWTEADVAAMDEKLSFKGRIEREGWIEQAKELAK 215
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Match: gi|254764484|sp|B8IQY6.1|RS2_METNO (RecName: Full=30S ribosomal protein S2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.256e-12
Identity = 41/100 (41.00%), Postives = 56/100 (56.00%), Query Frame = 0 
Query:  138 AAAKPQAKATAKPKSEPDPAPVTDAGPEA-QPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQ 236
            A+ +P A+      +EP+ A +  A P   +P  L AA     DDL +++GVGP+L   LND G YH+ QIA     ++  VD+ LK  GRI RD WI Q
Sbjct:  239 ASEEPLAEELPANLNEPEVAHLDIAEPYVGEPFELLAAPRGAPDDLTKLTGVGPQLVQKLNDAGIYHYWQIAAMAPEDVAKVDSELKLNGRIERDGWINQ 338
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BLAST of nadh dehydrogenase subunit e vs. nr
Match: gi|1221905470|ref|WP_089990251.1| (NADH-quinone oxidoreductase subunit E [Loktanella koreensis] >gi|1094441297|emb|SEW01847.1| NADH dehydrogenase subunit E [Loktanella koreensis])

HSP 1 Score: 299.286 bits (765), Expect = 8.740e-98
Identity = 165/245 (67.35%), Postives = 179/245 (73.06%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWIKGDATPRTGKVFKVDRKPKSVEDMAADAKKTPAARAAQTRAEDAAAEKAAAKPQAKA--TAKPKSEPDPAPVTDAGPEAQPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFAQE 243
            MAQIGKDYYEDLTA RL EIIDELAAGKVP PGPQNGRYAAEPL GLTSL  +DSGKTQYNASVQLA DIGDTVKRIDGTEVP+LTPW  G           V  KPK        AKKTP  + A   A   A++    K +A A   AKP+ + +P PV  A  E +P+TLTA R SGADDLKRISGVGPKLE  LN+LGF+HFDQIAKWT AEI WVD+RLKFKGRI RDDWIGQA  FA E
Sbjct:  146 MAQIGKDYYEDLTAERLGEIIDELAAGKVPVPGPQNGRYAAEPLKGLTSLQEYDSGKTQYNASVQLAVDIGDTVKRIDGTEVPILTPWRDGGT--------DVLEKPK--------AKKTPGPKPA---ANKPASKHGITKQEANADSAAKPRGKSNP-PVDGASTEKKPKTLTAPRKSGADDLKRISGVGPKLEQTLNELGFWHFDQIAKWTDAEITWVDSRLKFKGRIKRDDWIGQATKFAAE 370
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BLAST of nadh dehydrogenase subunit e vs. nr
Match: gi|495510752|ref|WP_008235397.1| (NADH-quinone oxidoreductase subunit E [Roseobacter sp. CCS2] >gi|126714622|gb|EBA11489.1| ATP synthase subunit E [Roseobacter sp. CCS2])

HSP 1 Score: 296.59 bits (758), Expect = 7.841e-97
Identity = 160/242 (66.12%), Postives = 174/242 (71.90%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWIKGDATPRTGKVFKVDRKPKSVEDMAADAKKTPAARAAQTRAEDAAAEKAAAKPQAKATAKPKSEPDPAPVTDAGPEAQPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFAQ 242
            MAQIGKDYYEDLT  RLSEIIDELAAG+VPTPGPQNGRYAAEPL GLTSL  HDSGKTQYNASVQLA+DIGDTVKRIDGTEVPLLTPW+K  A  +       D KP         A K PA     T+      ++A AK  AK T K    PD         E QPETLTA R  GADDLK+ISGVGPKLEGVLNDLGF+HFDQIAKWTA EI WVD+R+KFKGRI RD+W+ QA   A+
Sbjct:  146 MAQIGKDYYEDLTTERLSEIIDELAAGRVPTPGPQNGRYAAEPLKGLTSLKDHDSGKTQYNASVQLASDIGDTVKRIDGTEVPLLTPWVKTGAPAKPKGKKTADPKP---------AAKKPADETGVTK------QQATAKSMAKPTGKSNPNPD--------IEKQPETLTAPRDGGADDLKKISGVGPKLEGVLNDLGFWHFDQIAKWTADEIAWVDSRIKFKGRIERDNWMAQAAELAK 364
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BLAST of nadh dehydrogenase subunit e vs. nr
Match: gi|1189856083|ref|WP_085865458.1| (NADH-quinone oxidoreductase subunit E [Pseudooctadecabacter jejudonensis] >gi|1187966528|emb|SLN58365.1| NADH-quinone oxidoreductase chain 2 [Pseudooctadecabacter jejudonensis])

HSP 1 Score: 288.5 bits (737), Expect = 2.811e-93
Identity = 153/253 (60.47%), Postives = 181/253 (71.54%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWIKGDATPRTGKVFKVDRKPKSVEDMAAD--------AKKTPAARAAQTR--AEDAAAEKAAAKPQAKATAKPKSEPDPAPVTDAGPEAQPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFAQE 243
            MAQIGKDYYEDLTA R+ EIIDELAAG+VPTPGPQNGRYA+EPL GLT+LT  D+GK QYNASVQLA+DIGDTVKRIDGTEVPLL PW  G A P T    +V   P + +   A           KTP A  ++ +  ++D   ++ A    A + AKP+ + +P     A  E +P TL+A R +GADDLKRISGVGPKLEGVLN+LGF+HFDQIAKWT AE+ WVD+RLKFKGRI RD+WI QA   A E
Sbjct:  146 MAQIGKDYYEDLTAVRMGEIIDELAAGQVPTPGPQNGRYASEPLKGLTTLTEFDAGKHQYNASVQLASDIGDTVKRIDGTEVPLLAPW--GQAAPTTNAPVQVTGAPANQQKPVAKRPAVKKAVGDKTPGATPSKNKPASKDGITKQEA---NADSAAKPRGKSNPPASASASAEKKPRTLSAPRKAGADDLKRISGVGPKLEGVLNELGFWHFDQIAKWTDAEVAWVDSRLKFKGRIERDNWIDQAAKLAAE 393
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BLAST of nadh dehydrogenase subunit e vs. nr
Match: gi|944380203|ref|WP_055686062.1| (NADH-quinone oxidoreductase subunit E [Loktanella sp. 5RATIMAR09] >gi|943690557|gb|KQI72799.1| NADH dehydrogenase [Loktanella sp. 5RATIMAR09])

HSP 1 Score: 284.648 bits (727), Expect = 5.532e-92
Identity = 158/242 (65.29%), Postives = 176/242 (72.73%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWIKGDATPRTGKVFKVDRKPKSVEDMAADAKKTPAARAAQTRAEDAAAEKAAAKPQAKATAKPKSEPDPAPVTDAGPEAQPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFAQ 242
            MAQIGKDYYEDLTA RL EIIDELAAG+VPTPGPQNGR+AAEPL GLTSL  +DSGKT+YNASVQLATDIGDTVKRIDGTEVPLLTPW+K D    T         PK+   +A  A   P  +   T+ E      A AK +AK T K    PD A   DAG  + PETLTA R   ADDLK+ISGVGPKLE VLN+LGF+HFDQIAKWT AEI WVD+RLKFKGRI RD+W+ QA   A+
Sbjct:  146 MAQIGKDYYEDLTAERLREIIDELAAGRVPTPGPQNGRFAAEPLKGLTSLKDYDSGKTKYNASVQLATDIGDTVKRIDGTEVPLLTPWVK-DGQKVTA--------PKTKAKVAKPAADKPVDQTGMTKQE------AVAKSKAKPTGKSNPNPDLAD-DDAG--SAPETLTAPRDGKADDLKKISGVGPKLEQVLNELGFWHFDQIAKWTDAEIAWVDSRLKFKGRIARDNWMAQAADLAK 369
[Close]
BLAST of nadh dehydrogenase subunit e vs. nr
Match: gi|1361156613|ref|WP_106353636.1| (NADH-quinone oxidoreductase subunit E [Loktanella maritima] >gi|1360119420|gb|PRY80255.1| NADH-quinone oxidoreductase subunit E [Loktanella maritima])

HSP 1 Score: 279.256 bits (713), Expect = 7.333e-90
Identity = 150/242 (61.98%), Postives = 169/242 (69.83%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWIK-GDATPRTGKVFKVDRKPKSVEDMAADAKKTPAARAAQTRAEDAAAEKAAAKPQAKATAKPKSEPDPAPVTDAGPEAQPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFA 241
            MAQIGKDYYEDL+AARLSEIIDELAAG+VP PGPQNGR+AAEPL GLTSL  +DSGKT+YNASVQ A DIGDTVKRIDGTEVPLLTPWI  G A P+  K     +  K       D                   +    K +A A +K K E  PAP  D   E +P T+ A R +GADDLKRISGVGPKLEGVLN+LGF+HFDQIAKWT AE+ WVD+RLKFKGRI+RD+W  QA   A
Sbjct:  146 MAQIGKDYYEDLSAARLSEIIDELAAGQVPVPGPQNGRFAAEPLKGLTSLRGYDSGKTKYNASVQAAVDIGDTVKRIDGTEVPLLTPWINDGSAAPQKPKAADKPKAAKPAAKKPID-------------------KTGITKQEAVAKSKGKPEVQPAPAADVA-EKKPRTMKAPRKAGADDLKRISGVGPKLEGVLNELGFWHFDQIAKWTDAEVVWVDSRLKFKGRIVRDNWTAQAAELA 367
[Close]
BLAST of nadh dehydrogenase subunit e vs. nr
Match: gi|1140799239|ref|WP_076658709.1| (NADH-quinone oxidoreductase subunit E [Loktanella rosea] >gi|1133996806|emb|SIT80763.1| NADH dehydrogenase subunit E [Loktanella rosea])

HSP 1 Score: 275.789 bits (704), Expect = 1.457e-88
Identity = 153/242 (63.22%), Postives = 169/242 (69.83%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWIKGDATPRTGKVFKVDRKPKSVEDMAADAKKTPAARAAQTRAEDAAAEKAAAKPQAKATAKPKSEPDPAPVTDAGPEAQPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFAQ 242
            MAQIGKDYYEDLTA RL EIIDELAAG+VPTPGPQNGR+AAEPL GLTSL  +DSGKT+YNASVQLATDIGDTVKRIDGTEVPLLTPW+K                          AK    A            ++AAAK +AK T K    PD A   DAG  + PETLTA R   ADDLK+ISGVGPKLE VLN+LGF+HFDQIAKWT AEI WVD+RLKFKGRI RD+W+ QA   A+
Sbjct:  146 MAQIGKDYYEDLTAERLREIIDELAAGRVPTPGPQNGRFAAEPLKGLTSLKDYDSGKTKYNASVQLATDIGDTVKRIDGTEVPLLTPWVKDAKKVAA---------------PKTKAKAAKPAADKPVDQTGVTKQQAAAKSKAKPTGKSNPNPDLAG-EDAG--SAPETLTAPRDGKADDLKKISGVGPKLEQVLNELGFWHFDQIAKWTEAEIAWVDSRLKFKGRIARDNWMAQAADLAK 369
[Close]
BLAST of nadh dehydrogenase subunit e vs. nr
Match: gi|1222149023|ref|WP_090204405.1| (NADH-quinone oxidoreductase subunit E [Loktanella litorea] >gi|1097297375|emb|SFS06694.1| NADH dehydrogenase subunit E [Loktanella litorea])

HSP 1 Score: 275.404 bits (703), Expect = 1.495e-88
Identity = 151/242 (62.40%), Postives = 170/242 (70.25%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWIKGDATPRTGKVFKVDRKPKSVEDMAADAKKTPAARAAQTRAEDAAAEKAAAKPQAKATAKPKSEPDPAPVTDAGPEAQPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFAQ 242
            M QIGKDYYEDLTA R +EIIDELAAG+VP PGPQNGRYAAEPL GLTSL  +DSGKT+YNASVQLATDIGDTVKRIDGTEVPLLTPW+K    P T    KV+ +PK        AK  P      T+ + A AE A         AKP  + +P        E +PE L+  R  GADDLK+ISGVGPKLEGVLN+LGFYH+DQIA WT  EI WVD+RLKFKGRI RD WI QA+  A+
Sbjct:  146 MVQIGKDYYEDLTAERFAEIIDELAAGQVPVPGPQNGRYAAEPLKGLTSLKEYDSGKTKYNASVQLATDIGDTVKRIDGTEVPLLTPWVK----PVTADADKVE-EPKP-------AKNKPVDETGITK-QQAVAESA---------AKPVGKSNPETTI----EKEPELLSGPRDGGADDLKKISGVGPKLEGVLNELGFYHYDQIAAWTEEEIAWVDSRLKFKGRIARDGWIEQAQELAK 361
[Close]
BLAST of nadh dehydrogenase subunit e vs. nr
Match: gi|499360170|ref|WP_011048479.1| (NADH-quinone oxidoreductase subunit E [Ruegeria pomeroyi] >gi|56679355|gb|AAV96021.1| NADH:ubiquinone oxidoreductase 41 kD complex I subunit [Ruegeria pomeroyi DSS-3])

HSP 1 Score: 275.789 bits (704), Expect = 5.084e-88
Identity = 153/255 (60.00%), Postives = 175/255 (68.63%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWIKGDAT--PRTGKV----------FKVDRKPKSVEDMAADAKKTPAAR--AAQTRAEDAAAEKAAAKPQAKATAKPKSEPDPAPVTDAGPEAQPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFA 241
            MAQIGKDYYEDLTA R  E++DELAAGKVP PGPQNGRYA+EPL GLTSLT +DSGKT+YNASVQLATDIGDTVKRIDGTEVPLLTPWI  D T   R GKV            V + PK+    A   +  P  +  AA    E+ AA K + + +A     P +E   A  T    E QP TL+AAR  GADDLK + GVGPKLEG+LN+LGFYHFDQ+A WT A++ WVD RL FKGRI RD WI QA+  A
Sbjct:  146 MAQIGKDYYEDLTAKRFGELLDELAAGKVPVPGPQNGRYASEPLKGLTSLTEYDSGKTRYNASVQLATDIGDTVKRIDGTEVPLLTPWIGKDGTVASRAGKVSPPPAPAAPKPAVKQTPKAEAKPAPKPEAEPVLKPSAALPGQEELAARKGSWRYEA-----PAAEVAQADATGDAGEEQPLTLSAAREGGADDLKLLKGVGPKLEGLLNELGFYHFDQVAAWTPAQVAWVDARLTFKGRIERDGWIEQARQLA 395
[Close]
BLAST of nadh dehydrogenase subunit e vs. nr
Match: gi|942088206|ref|WP_055293131.1| (NADH-quinone oxidoreductase subunit E [Loktanella sp. 1ANDIMAR09] >gi|941332792|gb|KQB98361.1| NADH dehydrogenase [Loktanella sp. 1ANDIMAR09])

HSP 1 Score: 273.863 bits (699), Expect = 9.153e-88
Identity = 151/242 (62.40%), Postives = 169/242 (69.83%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWIKGDATPRTGKVFKVDRKPKSVEDMAADAKKTPAARAAQTRAEDAAAEKAAAKPQAKATAKPKSEPDPAPVTDAGPEAQPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLKFKGRILRDDWIGQAKAFAQ 242
            MAQIGKDYYEDLTA RL EIIDELAAG+VPTPGPQNGR+AAEPL GLTSL  +DSGKT+YNASVQLATDIGDTVKRIDGTEVPLLTPW+K              +   +         KT   +           ++A AK +AK T K    PD A   DAG    PETLTA R   ADDLK+ISGVGPKLE VLN+LGF+HFDQIAKWT AEI WVD+RLKFKGRI RD+W+ QA   A+
Sbjct:  146 MAQIGKDYYEDLTAERLREIIDELAAGRVPTPGPQNGRFAAEPLKGLTSLKDYDSGKTKYNASVQLATDIGDTVKRIDGTEVPLLTPWVKDAKKVAA----PKTKAKAAKPAADKPVDKTGVTK-----------QQAVAKSKAKPTGKSNPNPDLAG-EDAG--RAPETLTAPRDGKADDLKKISGVGPKLEQVLNELGFWHFDQIAKWTEAEIAWVDSRLKFKGRIARDNWMAQAADLAK 369
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BLAST of nadh dehydrogenase subunit e vs. nr
Match: gi|1224816195|ref|WP_092833161.1| (NADH-quinone oxidoreductase subunit E [Roseovarius lutimaris] >gi|1097831335|emb|SFN35291.1| NADH dehydrogenase subunit E [Roseovarius lutimaris])

HSP 1 Score: 272.707 bits (696), Expect = 7.380e-87
Identity = 152/250 (60.80%), Postives = 175/250 (70.00%), Query Frame = 0 
Query:    1 MAQIGKDYYEDLTAARLSEIIDELAAGKVPTPGPQNGRYAAEPLSGLTSLTAHDSGKTQYNASVQLATDIGDTVKRIDGTEVPLLTPWIKGDATPRTGKVFKVDRKPKSVEDMAADAKKTPAARAAQTRAEDAAAEKAAAKPQAKATAKPKSEP------DPA-PVTDAGPEAQPETLTAARASGADDLKRISGVGPKLEGVLNDLGFYHFDQIAKWTAAEIQWVDNRLK-FKGRILRDDWIGQAKAFAQ 242
            MAQIGKDYYEDLTAAR +E+ID+LA GKVPTPGPQNGRYAAEP SGLTSLT  DSG+ +YNASVQLA+DIGDTVKRIDGTEVP+LTPW    A  +     KV +    V+ +A      P A+A   +A+   A KA A  QAK TAKP  +P       PA PV   GP  QP  + A R SGADDLK I GVGPKLE +LND+GFYHFDQIAKWT  E+ WVD  L+ FKGR+ RD W+ QAK  A+
Sbjct:  146 MAQIGKDYYEDLTAARFAEMIDDLADGKVPTPGPQNGRYAAEPKSGLTSLTEFDSGRAKYNASVQLASDIGDTVKRIDGTEVPILTPWRDKGANHKPA-ASKVKQNDAPVDVVAKKPAPKPGAKA---KADVTGATKAEA--QAKTTAKPAIKPAAEPVKSPADPVASTGPGKQPRVMKAPRKSGADDLKMIKGVGPKLEKLLNDMGFYHFDQIAKWTEDEVSWVDQNLEGFKGRVSRDSWVEQAKLLAE 389
The following BLAST results are available for this feature:
BLAST of nadh dehydrogenase subunit e vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000006666.850e-1256.86supercontig:LSalAtl2s:LSalAtl2s1105:6692:7651:-1 g... [more]
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BLAST of nadh dehydrogenase subunit e vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
gi|266652|sp|P29914.1|NQO2_PARDE4.194e-2960.67RecName: Full=NADH-quinone oxidoreductase chain 2;... [more]
gi|122064988|sp|Q28Q15.1|RL21_JANSC3.809e-2565.75RecName: Full=50S ribosomal protein L21[more]
gi|115502497|sp|Q0MQI9.1|NDUV2_PANTR5.443e-1564.71RecName: Full=NADH dehydrogenase [ubiquinone] flav... [more]
gi|20455499|sp|P19404.2|NDUV2_HUMAN5.724e-1564.71RecName: Full=NADH dehydrogenase [ubiquinone] flav... [more]
gi|115502496|sp|Q0MQI8.1|NDUV2_GORGO5.782e-1564.71RecName: Full=NADH dehydrogenase [ubiquinone] flav... [more]
gi|83305118|sp|P19234.2|NDUV2_RAT7.261e-1566.67RecName: Full=NADH dehydrogenase [ubiquinone] flav... [more]
gi|146345463|sp|Q9D6J6.2|NDUV2_MOUSE2.026e-1464.71RecName: Full=NADH dehydrogenase [ubiquinone] flav... [more]
gi|128865|sp|P04394.3|NDUV2_BOVIN2.890e-1462.75RecName: Full=NADH dehydrogenase [ubiquinone] flav... [more]
gi|122069609|sp|Q165Y2.2|RL21_ROSDO5.870e-1353.97RecName: Full=50S ribosomal protein L21[more]
gi|254764484|sp|B8IQY6.1|RS2_METNO2.256e-1241.00RecName: Full=30S ribosomal protein S2[more]

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BLAST of nadh dehydrogenase subunit e vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1221905470|ref|WP_089990251.1|8.740e-9867.35NADH-quinone oxidoreductase subunit E [Loktanella ... [more]
gi|495510752|ref|WP_008235397.1|7.841e-9766.12NADH-quinone oxidoreductase subunit E [Roseobacter... [more]
gi|1189856083|ref|WP_085865458.1|2.811e-9360.47NADH-quinone oxidoreductase subunit E [Pseudooctad... [more]
gi|944380203|ref|WP_055686062.1|5.532e-9265.29NADH-quinone oxidoreductase subunit E [Loktanella ... [more]
gi|1361156613|ref|WP_106353636.1|7.333e-9061.98NADH-quinone oxidoreductase subunit E [Loktanella ... [more]
gi|1140799239|ref|WP_076658709.1|1.457e-8863.22NADH-quinone oxidoreductase subunit E [Loktanella ... [more]
gi|1222149023|ref|WP_090204405.1|1.495e-8862.40NADH-quinone oxidoreductase subunit E [Loktanella ... [more]
gi|499360170|ref|WP_011048479.1|5.084e-8860.00NADH-quinone oxidoreductase subunit E [Ruegeria po... [more]
gi|942088206|ref|WP_055293131.1|9.153e-8862.40NADH-quinone oxidoreductase subunit E [Loktanella ... [more]
gi|1224816195|ref|WP_092833161.1|7.380e-8760.80NADH-quinone oxidoreductase subunit E [Roseovarius... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold3970_size7010supercontigscaffold3970_size7010:5489..6220 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:oxidation-reduction process
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold3970_size7010-processed-gene-0.1-mRNA-1snap_masked-scaffold3970_size7010-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold3970_size7010:5489..6220+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold3970_size7010-processed-gene-0.1 ID=snap_masked-scaffold3970_size7010-processed-gene-0.1|Name=nadh dehydrogenase subunit e|organism=Tigriopus kingsejongensis|type=gene|length=732bp|location=Sequence derived from alignment at scaffold3970_size7010:5489..6220+ (Tigriopus kingsejongensis)
ATGGCCCAGATCGGCAAGGATTATTACGAAGATCTGACCGCGGCACGGTT
GTCAGAGATTATTGACGAATTGGCTGCCGGAAAAGTTCCGACACCGGGTC
CGCAGAACGGTCGCTACGCCGCAGAGCCTTTGTCGGGCCTGACATCATTG
ACCGCGCATGACAGCGGCAAGACGCAATATAACGCTTCTGTGCAATTGGC
GACTGACATCGGTGATACGGTCAAACGGATCGACGGGACGGAAGTGCCGC
TTTTGACGCCGTGGATCAAAGGCGATGCGACGCCCCGAACCGGCAAGGTC
TTCAAGGTTGATCGTAAACCGAAATCGGTTGAAGATATGGCTGCGGATGC
CAAGAAAACGCCTGCGGCCCGTGCCGCCCAAACACGCGCCGAAGATGCTG
CCGCTGAAAAAGCCGCCGCAAAACCACAGGCTAAAGCAACAGCAAAACCG
AAATCAGAGCCCGATCCTGCACCTGTAACTGATGCAGGCCCAGAAGCCCA
ACCCGAGACATTGACTGCTGCGCGTGCGTCAGGTGCGGATGACCTGAAAC
GGATCAGTGGTGTTGGCCCCAAGCTGGAAGGTGTGCTGAATGACCTTGGG
TTTTACCACTTCGACCAGATCGCGAAATGGACTGCAGCTGAAATTCAATG
GGTGGATAACCGTTTGAAATTCAAAGGCCGGATTCTGCGCGATGATTGGA
TTGGACAGGCAAAAGCCTTTGCACAGGAGTAA
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Synonyms
The feature 'nadh dehydrogenase subunit e' has the following synonyms
Synonym
Tk00884
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