fumarate hydratase, snap_masked-scaffold3_size1495701-processed-gene-3.0 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of fumarate hydratase vs. L. salmonis genes
Match: EMLSAG00000011633 (supercontig:LSalAtl2s:LSalAtl2s806:113709:119311:1 gene:EMLSAG00000011633 transcript:EMLSAT00000011633 description:"maker-LSalAtl2s806-augustus-gene-0.29") HSP 1 Score: 88.5817 bits (218), Expect = 3.380e-19 Identity = 39/81 (48.15%), Postives = 62/81 (76.54%), Query Frame = 0 Query: 4 DADKTDLIEQAAEEVMAGKL-DQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 D+ D I +AA+EV++G L ++HF + ++QTGSGT +NMN NEVI+NR ++ G ++G+K PVHPNDHVN++ +++ +P Sbjct: 371 DSKIADAISKAADEVISGDLYNEHFPLVIWQTGSGTQSNMNTNEVIANRAIQLLGGKMGSKSPVHPNDHVNKSQSSNDTYP 451
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931639|sp|Q9RR70.1|FUMC_DEIRA (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 105.531 bits (262), Expect = 9.184e-24 Identity = 48/79 (60.76%), Postives = 63/79 (79.75%), Query Frame = 0 Query: 5 ADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 AD DLI +AA+EV+AGKLD+HF + V+QTGSGT +NMN NEVISNR E+ G E+G+K+PVHPNDHVN+ +++ P Sbjct: 69 ADVADLIVKAADEVIAGKLDEHFPLVVFQTGSGTQSNMNANEVISNRAIELAGGEMGSKKPVHPNDHVNRGQSSNDTFP 147
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931506|sp|Q83CL8.2|FUMC_COXBU (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 102.449 bits (254), Expect = 1.261e-22 Identity = 44/78 (56.41%), Postives = 61/78 (78.21%), Query Frame = 0 Query: 6 DKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 +K + I +A EE++AGKL+ HF + ++QTGSGT TNMNVNEVISNR E+ G ++G+KEPVHPNDHVN + +++ P Sbjct: 65 EKANFILKACEELIAGKLNDHFPLKIWQTGSGTQTNMNVNEVISNRAIELAGGKLGSKEPVHPNDHVNMSQSSNDTFP 142
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931358|sp|Q7SX99.1|FUMH_DANRE (RecName: Full=Fumarate hydratase, mitochondrial; Short=Fumarase; Flags: Precursor) HSP 1 Score: 100.908 bits (250), Expect = 5.127e-22 Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = 0 Query: 4 DADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 D D I +AA+EV +GKLD HF + V+QTGSGT TNMNVNEVISNR EM G ++G+K+PVHPNDHVN++ +++ P Sbjct: 112 DPKIADAIMKAADEVESGKLDDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKSQSSNDTFP 191
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931306|sp|O17214.1|FUMH_CAEEL (RecName: Full=Probable fumarate hydratase, mitochondrial; Short=Fumarase; Flags: Precursor) HSP 1 Score: 100.523 bits (249), Expect = 5.849e-22 Identity = 64/172 (37.21%), Postives = 89/172 (51.74%), Query Frame = 0 Query: 4 DADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAH-----AIHPNYAQKHDPDHAPVLGGGVVIKHNANQRYATNANSAALIRSIALKNHIPLQDMVNYTIGNRLHSVL-----KIQGLNSLLSRWYALKA 165 D D I QAA+EV+ GKLD+HF + +QTGSGT +NMNVNEVISNR E+ G E+G+K+PVHPNDHVN + +++ A+H ++ + P L HN + + + I QD V T+G + + I + S L R Y L A Sbjct: 104 DKKLADAISQAADEVVDGKLDEHFPLVTWQTGSGTQSNMNVNEVISNRAIEILGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAVGREVNSRLLPALKKLRTALHNKAEEF----------KDIIKIGRTHTQDAVPLTLGQEFSAYVTQLDNSIARVESTLPRLYQLAA 265
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931574|sp|Q8F9L0.1|FUMC_LEPIN (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase >gi|73919603|sp|Q72VY3.1|FUMC_LEPIC RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 98.9821 bits (245), Expect = 1.582e-21 Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 0 Query: 6 DKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 DK LI QAA+EV++GKLD+HF + V+QTGSGT TNMN NEVISNR E+ G G+K+P+HPND VN+A +++ P Sbjct: 67 DKKKLIVQAADEVISGKLDEHFPLSVWQTGSGTQTNMNSNEVISNRAIEIAGGVKGSKKPIHPNDDVNKAQSSNDTFP 144
BLAST of fumarate hydratase vs. SwissProt
Match: gi|120604|sp|P10173.1|FUMH_PIG (RecName: Full=Fumarate hydratase, mitochondrial; Short=Fumarase) HSP 1 Score: 97.8265 bits (242), Expect = 3.925e-21 Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 0 Query: 4 DADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 D + I +AA+EV GKL+ HF + V+QTGSGT TNMNVNEVISNR EM G E+G+K+PVHPNDHVN++ +++ P Sbjct: 69 DPKIANAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKKPVHPNDHVNKSQSSNDTFP 148
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39932723|sp|P28894.3|FUMC2_BRADU (RecName: Full=Fumarate hydratase class II 2; Short=Fumarase C 2; AltName: Full=Aerobic fumarase 2; AltName: Full=Iron-independent fumarase 2) HSP 1 Score: 97.8265 bits (242), Expect = 3.934e-21 Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 0 Query: 4 DADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAH-----AIHPNYAQKHDPDHAPVLG 98 D + I +AA EV+ G LD HF + V+QTGSGT TNMN+NEVI+NR E+ G E+GAK+PVHPNDHVN + +++ A+H A + D P LG Sbjct: 76 DQRRASAIIRAAREVIDGSLDDHFPLVVWQTGSGTQTNMNLNEVIANRANELLGGELGAKKPVHPNDHVNMSQSSNDSFPTAMHIAAASRITADLVPALG 175
BLAST of fumarate hydratase vs. SwissProt
Match: gi|120605|sp|P14408.1|FUMH_RAT (RecName: Full=Fumarate hydratase, mitochondrial; Short=Fumarase; Flags: Precursor) HSP 1 Score: 98.2117 bits (243), Expect = 4.260e-21 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 0 Query: 4 DADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 D I +AA+EV GKL+ HF + V+QTGSGT TNMNVNEVISNR EM G E+G+K+PVHPNDHVN++ +++ P Sbjct: 110 DPKIASAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKKPVHPNDHVNKSQSSNDTFP 189
BLAST of fumarate hydratase vs. SwissProt
Match: gi|341941093|sp|P97807.3|FUMH_MOUSE (RecName: Full=Fumarate hydratase, mitochondrial; Short=Fumarase; AltName: Full=EF-3; Flags: Precursor) HSP 1 Score: 97.8265 bits (242), Expect = 5.331e-21 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 0 Query: 4 DADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 D I +AA+EV GKL+ HF + V+QTGSGT TNMNVNEVISNR EM G E+G+K+PVHPNDHVN++ +++ P Sbjct: 110 DPKIASAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKKPVHPNDHVNKSQSSNDTFP 189
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931635|sp|Q9I587.1|FUMC1_PSEAE (RecName: Full=Fumarate hydratase class II 1; Short=Fumarase C 1; AltName: Full=Aerobic fumarase 1; AltName: Full=Iron-independent fumarase 1) HSP 1 Score: 97.0561 bits (240), Expect = 7.433e-21 Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 0 Query: 10 LIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 LIEQAA+EV+AG+ D+HF + V+QTGSGT TNMNVNEVI+ R E+ G G K PVHPNDHVN+A +++ P Sbjct: 70 LIEQAADEVLAGRHDEHFPLVVWQTGSGTQTNMNVNEVIAGRANELAGNPRGGKSPVHPNDHVNRAQSSNDSFP 143
BLAST of fumarate hydratase vs. nr
Match: gi|740333621|ref|WP_038170376.1| (class II fumarate hydratase [Verrucomicrobium sp. BvORR106]) HSP 1 Score: 124.02 bits (310), Expect = 9.692e-28 Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 0 Query: 5 ADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAH-----AIHPNYAQK 88 ADK LIEQAA EV AG LD HFV+D+YQTGSGTSTNMN NEVISNRIC++ GK IGAKEPVHPNDHVN +++ AIH AQ+ Sbjct: 66 ADKAALIEQAALEVAAGDLDAHFVLDIYQTGSGTSTNMNANEVISNRICQIAGKPIGAKEPVHPNDHVNMGQSSNDTFPTAIHIAVAQE 154
BLAST of fumarate hydratase vs. nr
Match: gi|497649083|ref|WP_009963267.1| (class II fumarate hydratase [Verrucomicrobium spinosum]) HSP 1 Score: 122.865 bits (307), Expect = 2.757e-27 Identity = 60/89 (67.42%), Postives = 69/89 (77.53%), Query Frame = 0 Query: 5 ADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAH-----AIHPNYAQK 88 ADK LIEQAA EV AG LD HFV+D+YQTGSGTSTNMN NEVISNRIC++ GK IGAK+PVHPNDHVN +++ AIH AQ+ Sbjct: 66 ADKAALIEQAALEVAAGDLDSHFVLDIYQTGSGTSTNMNANEVISNRICQIAGKPIGAKDPVHPNDHVNMGQSSNDTFPTAIHVAVAQE 154
BLAST of fumarate hydratase vs. nr
Match: gi|910221482|ref|WP_050027294.1| (class II fumarate hydratase [Verrucomicrobium sp. BvORR034]) HSP 1 Score: 121.709 bits (304), Expect = 6.491e-27 Identity = 60/89 (67.42%), Postives = 68/89 (76.40%), Query Frame = 0 Query: 5 ADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAH-----AIHPNYAQK 88 ADK LIEQAA EV AG LD HFV+D YQTGSGTSTNMN NEVISNRIC++ GK IGAK+PVHPNDHVN +++ AIH AQ+ Sbjct: 66 ADKAALIEQAALEVAAGDLDAHFVLDTYQTGSGTSTNMNANEVISNRICQIAGKPIGAKDPVHPNDHVNMGQSSNDTFPTAIHVAVAQE 154
BLAST of fumarate hydratase vs. nr
Match: gi|1028426774|gb|OAI56074.1| (class II fumarate hydratase [Verrucomicrobiaceae bacterium SCGC AG-212-N21]) HSP 1 Score: 121.709 bits (304), Expect = 8.219e-27 Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = 0 Query: 6 DKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAH-----AIHPNYAQKHDPDHAPVL 97 DK LIEQA+ EV GKLDQHFV+D+YQTGSGTSTNMN NEVISNR C++ GK IGAK+PVHPNDHVN +++ A+H AQ+ PVL Sbjct: 67 DKAALIEQASLEVAEGKLDQHFVLDIYQTGSGTSTNMNANEVISNRACQIAGKPIGAKDPVHPNDHVNMGQSSNDTFPTAMHVAVAQELQKKLLPVL 163
BLAST of fumarate hydratase vs. nr
Match: gi|1180071631|ref|WP_083591462.1| (class II fumarate hydratase [Aurantimonas sp. 22II-16-19i] >gi|1178168142|gb|ORE97193.1| fumarate hydratase [Aurantimonas sp. 22II-16-19i]) HSP 1 Score: 109.768 bits (273), Expect = 1.117e-22 Identity = 50/80 (62.50%), Postives = 64/80 (80.00%), Query Frame = 0 Query: 5 ADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHPN 84 A+ D IE+AA+E++AGKLD HF + VYQTGSGT TNMNVNEVISNR EM G E+G+K+PVHPNDHVN + +++ + P Sbjct: 66 AEIADAIEKAADEIIAGKLDDHFPLVVYQTGSGTQTNMNVNEVISNRAIEMMGGEMGSKKPVHPNDHVNMSQSSNDVFPT 145
BLAST of fumarate hydratase vs. nr
Match: gi|1200367732|gb|OUU86850.1| (aspartate ammonia-lyase [Verrucomicrobiaceae bacterium TMED76]) HSP 1 Score: 108.612 bits (270), Expect = 2.286e-22 Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 0 Query: 6 DKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 D T IE+AAEEV GKLD HF +DVYQTGSGTSTNMN NEVI+NR ++ GK IG+K+P+HPNDHVNQ +++ P Sbjct: 68 DLTIQIERAAEEVYDGKLDDHFPVDVYQTGSGTSTNMNANEVIANRCSQLAGKPIGSKDPIHPNDHVNQGQSSNDTFP 145
BLAST of fumarate hydratase vs. nr
Match: gi|1125442896|gb|OLD70085.1| (aspartate ammonia-lyase, partial [Verrucomicrobia bacterium 13_1_20CM_4_55_9]) HSP 1 Score: 108.227 bits (269), Expect = 2.930e-22 Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = 0 Query: 4 DADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAH-----AIHPNYAQKHDPDHAPVLG 98 DA++ LI QAAEEV+ GKLD HF +D++QTGSGTSTN N NEVI+NR ++ GK+IG++E VHPNDHVN +++ AIH + A++ P LG Sbjct: 68 DAERAALIVQAAEEVIEGKLDDHFPLDIFQTGSGTSTNTNANEVIANRCAQLAGKKIGSRELVHPNDHVNMGQSSNDVIPSAIHISAAEQLKNHLVPALG 167
BLAST of fumarate hydratase vs. nr
Match: gi|1084492202|gb|OGN55636.1| (fumarate hydratase, class II [Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39] >gi|1084496128|gb|OGN59244.1| fumarate hydratase, class II [Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_45_9] >gi|1084497402|gb|OGN60428.1| fumarate hydratase, class II [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_44_59] >gi|1084504157|gb|OGN66549.1| fumarate hydratase, class II [Chlamydiae bacterium RIFCSPLOWO2_01_FULL_44_52] >gi|1084507524|gb|OGN69798.1| fumarate hydratase, class II [Chlamydiae bacterium RIFCSPLOWO2_02_FULL_45_22] >gi|1084508085|gb|OGN70338.1| fumarate hydratase, class II [Chlamydiae bacterium RIFCSPLOWO2_12_FULL_45_20]) HSP 1 Score: 108.612 bits (270), Expect = 2.979e-22 Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 0 Query: 4 DADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 DA + LI QAA+EV+AGKLDQHF + ++QTGSGT TNMN NEV+SNR E+ G ++G+K+PVHPNDHVN + +++ P Sbjct: 66 DAKRASLIVQAADEVIAGKLDQHFPLSIWQTGSGTQTNMNFNEVLSNRAIELAGGKLGSKDPVHPNDHVNMSQSSNDTFP 145
BLAST of fumarate hydratase vs. nr
Match: gi|494126641|ref|WP_007066415.1| (class II fumarate hydratase [Fulvimarina pelagi] >gi|114539321|gb|EAU42441.1| Fumarate lyase:Delta crystallin:Fumarate hydratase, class II [Fulvimarina pelagi HTCC2506]) HSP 1 Score: 108.227 bits (269), Expect = 3.693e-22 Identity = 48/75 (64.00%), Postives = 62/75 (82.67%), Query Frame = 0 Query: 9 DLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHP 83 DLIE+AA+E++AGKLD HF + V+QTGSGT TNMNVNEVISNR EM G +G+K+PVHPNDHVN + +++ + P Sbjct: 70 DLIEKAADEIIAGKLDDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMAGGTMGSKKPVHPNDHVNMSQSSNDVFP 144
BLAST of fumarate hydratase vs. nr
Match: gi|746123196|ref|WP_039188736.1| (class II fumarate hydratase [Aureimonas altamirensis] >gi|730468227|gb|KHJ55709.1| fumarate hydratase [Aureimonas altamirensis]) HSP 1 Score: 107.842 bits (268), Expect = 4.295e-22 Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 0 Query: 4 DADKTDLIEQAAEEVMAGKLDQHFVIDVYQTGSGTSTNMNVNEVISNRICEMKGKEIGAKEPVHPNDHVNQADNAHAIHPN 84 D D I QAA+EV++GKLD HF + VYQTGSGT TNMNVNEVISNR EM G E+G+K+PVHPNDHVN +++ + P Sbjct: 66 DGKLADTIIQAADEVISGKLDDHFPLVVYQTGSGTQTNMNVNEVISNRAIEMMGGELGSKKPVHPNDHVNMGQSSNDVFPT 146 The following BLAST results are available for this feature:
BLAST of fumarate hydratase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of fumarate hydratase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of fumarate hydratase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold3_size1495701:11462..307174- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold3_size1495701-processed-gene-3.0 ID=snap_masked-scaffold3_size1495701-processed-gene-3.0|Name=fumarate hydratase|organism=Tigriopus kingsejongensis|type=gene|length=295713bp|location=Sequence derived from alignment at scaffold3_size1495701:11462..307174- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'fumarate hydratase' has the following synonyms
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