dna-binding protein smubp-2-like isoform x1, snap_masked-scaffold522_size146686-processed-gene-0.13 (gene) Tigriopus kingsejongensis

Overview


Name	dna-binding protein smubp-2-like isoform x1
Unique Name	snap_masked-scaffold522_size146686-processed-gene-0.13
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000000606 (supercontig:LSalAtl2s:LSalAtl2s109:446994:450007:1 gene:EMLSAG00000000606 transcript:EMLSAT00000000606 description:"maker-LSalAtl2s109-augustus-gene-4.29")

HSP 1 Score: 261.151 bits (666), Expect = 9.986e-82
Identity = 157/388 (40.46%), Postives = 225/388 (57.99%), Query Frame = 0

Query:   90 RGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQS----LERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEE-DGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNEAVI 472
            + +L R+A++ RLT   +++++ E+      E  N    +  + H     +    +      L   K +S+L++     +ER   E++  V T + + L ++        + +LVCIDEAGF     +L  I  A R+IL GDH QLPPI  +P +   G+  S +E+L +L P  V+ L+ QYRS+++ISEWSS Y Y  ++  + +V +  L  L   + S+L   P VFIDTKG+ Y+EE D G+    D D+SI N NEAF+VE +V++ + L V P  I V          LRSLIW  +    I I TVD +QG+EKE+II+SFVRSN   EIGFLRE+RR NVS+TRARR  I +GDSETL H+ ALK L  FC DNE ++
Sbjct:   22 KDVLXREAKNQRLTNTFVNRFLPEEIY----ENSNSDDDIEIVNHAWKTVIDGNWQNIDSNILLFKKEISKLFKKHKILIERAKKESSIFVTTIASTSLDTY-----KKYNFDLVCIDEAGFVSQGNSLLHILRAPRIILCGDHCQLPPITFNPDSALEGYEISAMEKLTKLLPNCVSFLSIQYRSNQIISEWSSRYIYYNKLRTSSTVANITLQDLIPHQNSELNR-PFVFIDTKGQGYHEEQDEGSEFMTDADKSIVNLNEAFLVEIIVNKYIELGVSPKVISV----------LRSLIWKSDHLRDISIYTVDSFQGKEKEMIIISFVRSNPYGEIGFLRETRRINVSVTRARRCVIIVGDSETLCHDPALKDLVDFCSDNELIV 389

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000009428 (supercontig:LSalAtl2s:LSalAtl2s600:488026:492190:-1 gene:EMLSAG00000009428 transcript:EMLSAT00000009428 description:"maker-LSalAtl2s600-snap-gene-3.46")

HSP 1 Score: 228.409 bits (581), Expect = 5.561e-65
Identity = 156/445 (35.06%), Postives = 240/445 (53.93%), Query Frame = 0

Query:   30 LTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTT--SFSVLKSHLFSMVVGRD----LNLVCIDEAGFARDQLALHC---IAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPS-VRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYE--EDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLF 462
            + IIHGPPGTGKTTT+   V  A+ +G KVL  APS+ A D +   ++           ++   VR     R++   L KY ++  I S     +Q Q + ++R D  + +    +  ++++    +   +  +++ + +   A+V++TT  S   +   L  +    D     +LV IDE   A   L L C   +  A + IL+GDH QLPP  +S  A   GF  + +ERLV+  P +V +L  QYR +  I  WSS  FY+ +++A    V  ++LI L G++ ++ T++P++ IDT G   +E   DG     D+E+ S  N  EA +V   V +L+   + P DI VITPY  QV L+RS    D+     E+R+VDG+QG+EKE +I+S VRSN++  +GFL ESRR NV++TRA+R    + DSETLS        F
Sbjct:  167 IGIIHGPPGTGKTTTVVEIVSQAVKSGCKVLCVAPSNVAVDNLLERLVK----------NKLKCVRIGHPARISA-DLQKYSLDALIDSS----DQTQIVRDVRKDIDLALKNARKNRNEIKELRRECREREGKAI-KEIFSRAQVILTTLVSSDSVSGPLKVLKNKNDTSYPFDLVVIDECSQA---LELSCWISLPQAPKAILSGDHCQLPPTVMSQEAISKGFANTLMERLVKSHPVAVRVLEIQYRMNNSIMNWSSKEFYESKLKAGSDEVGKRVLIDLPGIENNEETSVPIILIDTAGXXMHEFVADG-----DEENGSKGNEGEASLVVSHVRKLIDAGMNPSDIAVITPYNLQVELIRSQFSGDKRP---EVRSVDGFQGQEKEAVILSLVRSNEKGNVGFLAESRRLNVAVTRAKRHLAVVCDSETLSKGDPFLKRF 584

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000005015 (supercontig:LSalAtl2s:LSalAtl2s260:591600:598646:1 gene:EMLSAG00000005015 transcript:EMLSAT00000005015 description:"maker-LSalAtl2s260-augustus-gene-6.11")

HSP 1 Score: 174.481 bits (441), Expect = 3.679e-46
Identity = 154/484 (31.82%), Postives = 221/484 (45.66%), Query Frame = 0

Query:    7 HYFNPNLDEAKLRAVDDCARC--RNLTIIHGPPGTGKTTTLAAAVLSALAN-GDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQ--------LYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARD-QLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLL-IHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSG-----IEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNEAVI 472
            H+  PNL +     V    R   R L++I GPPGTGKT T A  V   +   G  VLV APS+ A D +T  I                        R  +K +      +  +  P     V  LA   H+QI  + +  R   QL+ E T  LS+        L +S ERN+L+ A V+  T  +     +  M        + IDE+  A + +  +  + GA +LIL GDH QL P+ +   A   G ++S  ERLV L      L   QYR H  +S++ SN+FY+G ++   S  D+ L I        K    PM F  T G++     G          S  N  EA  VE+  ++ +   V+P  IG+ITPY  Q   L   +    S +       EI +VD +QGREK++II+S VRSN    IGFL + RR NV++TRA+ A I +G+ + LS      +L    KD+  ++
Sbjct:  475 HFSAPNLPDLNRSQVYAVRRALQRPLSLIQGPPGTGKTVTSATIVYQLVKQRGGPVLVCAPSNTAXDQLTEKIH-----------------------RTGLKCVRLCAKTREAIDSP-----VAHLA--LHNQIRNIDSDFRKLQQLKDE-TGELSKADEIRYRMLRKSSERNILKVADVICCTCIAAGDLRINHMRFAS----ILIDESMQATEPECMVPVVLGANQLILVGDHCQLGPVVMCKKASLGGLSQSLFERLVMLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVSGEDRKLNIDFPWPVPDK----PMFFYVTSGQEEIAGSG---------TSYLNRTEAANVEKFTTRFIKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLNTKLYQECEIASVDAFQGREKDIIIISCVRSNDHQGIGFLADPRRLNVALTRAKYAVIVVGNPKVLSKQPLWNNLLHHYKDHGCLV 909

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000010050 (supercontig:LSalAtl2s:LSalAtl2s662:147778:155854:1 gene:EMLSAG00000010050 transcript:EMLSAT00000010050 description:"maker-LSalAtl2s662-augustus-gene-1.18")

HSP 1 Score: 134.806 bits (338), Expect = 1.586e-33
Identity = 100/319 (31.35%), Postives = 163/319 (51.10%), Query Frame = 0

Query:  171 EAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQ---LALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVE------------LCPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALN-VRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRS-NKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNEAVI 472
            + + V+++TS   +  ++ S +VG+    V  DEAGF+ +    LA+      A ++L+GDH QL P+ LS      G   S +ERL+               P+ VT L   YRS   + + SS  FY G++ A    R    + +T  +E+     P VFID +G         +++R    +S FN  E  +V+++ ++LLA++ +    IG+I+PY  Q   + S++        +E  + + +QGREK++II+S  RS N    +GFL   +R NV+ITRA+  CI +GDS+ L  +    SL  + K+N   I
Sbjct:  339 DKSFVILSTS---VMGYVVSKMVGKLFTHVFYDEAGFSSEPECLLAIKPHLNHALIVLSGDHYQLGPVVLS--QNTFGLTISLMERLMTCDPYYMRGSGHTYNPKYVTKLVDNYRSDFRLLKLSSEIFYDGELVA----RSLPCLSVTRARENMGYRFPFVFIDVRG---------DMVRPKNCKSFFNNTEVEIVQKIANKLLAMDDISQKSIGLISPYRPQYMQMGSIM---HYCPRMEYGSPELFQGREKDIIIISTARSSNNSKTLGFLTNFKRFNVAITRAKYLCIVVGDSKLLEMDPVWSSLVNYIKENGGFI 636

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000003665 (supercontig:LSalAtl2s:LSalAtl2s19:264402:269259:-1 gene:EMLSAG00000003665 transcript:EMLSAT00000003665 description:"maker-LSalAtl2s19-snap-gene-2.18")

HSP 1 Score: 134.42 bits (337), Expect = 5.671e-33
Identity = 141/519 (27.17%), Postives = 229/519 (44.12%), Query Frame = 0

Query:   30 LTIIHGPPGTGKTTTLAAAVLSALANGD--------KVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYR----NQVQALAELRHDQIVRMG---AQARGSSQLEL-------------EMTKSLSQLY--------QSLERNVLEAARVVVTTSFSVLKSHLFSMVV------GRDLNLVCIDEAGFARDQLALHCIA-GAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVT-----LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPH------DIGVITPYWAQVTLLR------SLIWADE---SQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNE------IGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNEAVIPVATKED 479
            L++I GPPGTGK+T +++ V+  ++  +        K+L+ APS++A D++   +    P   L      I V Q   +   VK +    +    L++ E +      +Q     R ++I  +G    +A  SS++ L                KS+  L         Q + R  L+ A +V TT  S L   + S  +      GR+ ++  +DEA    +   L  +  G ++L++ GD  QLP    S  A+ + + +S   RL +    S T      L  QYR H  I+ W ++YFY G++    S            + S L   P+   D    +  E +         ++SIFN  EA  V  L+S++      PH       IGVIT Y  Q   L        +  +D    S+S + + TVDG+QG E ++I++S VRS+KQN+      IGF  ES R NV++TRA+ A   +GD +TLS +     L    +  + ++ +    D
Sbjct:  987 LSLIQGPPGTGKSTVISSLVIQIMSRFNIQGEKKPPKILLVAPSNSAIDSLVKKLRRLAPEMKL------IRVGQLNSMDKQVKEIELTRIVNNKLNEMESQLGTNESIQREITHRQEEINHIGHEIEKAISSSKINLLQRKLKDETFKLKRAKKSIQTLSNYEKDKKRQEITRTTLDDADIVATTLSSSLNGQMXSHFLRDKYKPGRNFSICIVDEASQCVEPEGLIPLKLGFSKLVMVGDPEQLPATVSSIKAKDLSYGQSLFNRLFKSSRNSDTNTSIHCLKIQYRMHGDIARWPNHYFYGGELTNGVSWTS---------RNSDL--FPLKLFDLSWTKMEETNN--------EKSIFNTKEAKFVATLISEIKK---EPHIIPGNKTIGVITFYSQQRKHLSLELQNLGIETSDGKRISKSAVTVCTVDGFQGSEXDIIVLSCVRSSKQNDIHTSSSIGFTGESERLNVALTRAKYALYIVGDFQTLSKSLMWSDLLKDVRKRKCIVNIGENYD 1477

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000004276 (supercontig:LSalAtl2s:LSalAtl2s224:316115:320975:1 gene:EMLSAG00000004276 transcript:EMLSAT00000004276 description:"maker-LSalAtl2s224-augustus-gene-3.17")

HSP 1 Score: 127.872 bits (320), Expect = 5.716e-31
Identity = 133/504 (26.39%), Postives = 212/504 (42.06%), Query Frame = 0

Query:    8 YFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSA--LANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVR-MGAQARGSSQLELEMTKSLSQLYQSL--ERNVLEA---ARVVVTTSFSVLKSHLFSMVVG-RDLNLVCIDEAGFARDQLALHCIAGA----ARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPES-------------------VTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLAL-NVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNK-------QNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNEAV 471
            Y NP   +A    +   AR     II GPPGTGKT TL   +L    L    ++LVTAPS+AACD +                                                   N + A  +++   +VR +GA+ +  +     + + L   Y S+  E+  +E    +R+VVTT  S   S  FS +   R    V +DEAGF  +   L  +        +++LAGD  QL P+  S  A+  G   S +ERL    P                     +T L   YR+H  I +  S  FY    E  PSV +       G         P+VF    G Q          RD++  S +NY EAF +   + +L ++  +    +G+ITPY  QV  ++S I + +     ++ +V+ +QG+E+ +I++S VRS+        ++ +GF+ + +R NV++TRA+   I +G+ + L  +   K    +C  N  +
Sbjct:  676 YLNPEQKQAVRSILKGEARPIPY-IIFGPPGTGKTVTLLETILQIFILRKDSRILVTAPSNAACDLLL--------------------------------------------------NLLAASKKVKPGDVVRILGARRKFEN-----IPEYLIPYYFSIKNEKETMEGVLKSRIVVTTCTS---SSFFSRIKDFRRFTHVFVDEAGFVLEPDILTPLNFVDIEEGQIVLAGDEKQLSPVLSSSLAKEFGLAYSLIERLCSFNPLYAPDPNKFVTRFSDSYDSLLITKLVRNYRNHPAILKLPSKLFYHD--ELIPSVSNNQ--SFKGYDILLNEDFPIVFHALDGEQR---------RDEDSPSWYNYQEAFQIVLYLRKLYSIPRISEDQVGIITPYRKQVDCIKSYIQSFDLPIP-KVGSVEEFQGQERLIILLSTVRSSXLDTPASTKHVLGFVGDEKRFNVALTRAKDLLIIVGNPKVLIQDSVWKEFIEYCDRNHVI 1106

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000003094 (supercontig:LSalAtl2s:LSalAtl2s173:343286:346696:-1 gene:EMLSAG00000003094 transcript:EMLSAT00000003094 description:"maker-LSalAtl2s173-snap-gene-3.31")

HSP 1 Score: 115.931 bits (289), Expect = 4.484e-27
Identity = 126/482 (26.14%), Postives = 210/482 (43.57%), Query Frame = 0

Query:   13 LDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAV-LSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKS---FLERLVELCPESVTLLTTQYRSHRLISEWSSNYFYQGQVE-----AAPSVRDQLLIHLTGVKESKLTTMP-----MVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVR--SNKQNEI----GFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNEAVIPV 474
            L+  + +A+      ++   + G PGTGKTT + A + L A+     VL+T+ ++ A D + L +L+    D +G                                                   +R+G ++R + +L   M +S ++    L         VV TT   +  +H    +  R  +   +DEAG A    ++  +  A   IL GD  QL P+  S  A+ +G ++S    +ER   + P     LT QYR +  I+E ++   Y+G++E      A ++  +   H +     K    P     +VF+DT  R      G           I N +E  ++E+L++++   N   +DIGVI PY AQV+LLR         +GI++ TVD +QG++K++I  S  R  SN ++E       L + RR NV+ITRA+   I +G+ +TL +      L T    +E +I V
Sbjct:  620 LNRVQQKAIFKTLMAKDNICLKGMPGTGKTTLIVALIRLLAMTMKKSVLLTSYTNTAXDNVXLKLLS---FDDVG--------------------------------------------------FIRLGRRSRINPRLYNHMFESQTEFEDKL---------VVGTTCLGL--NH--PAITSRRFDYCILDEAGQASLLSSVGPLFHAKVFILVGDPEQLRPVVRSVQARSLGMSESIFSLMERENNVIP-----LTLQYRMNSRITECANFLTYKGELECGNTQVASNILKEDHSHDSDPSWVKSALDPSLHQSIVFLDTGSRGVESRHGS--------YGITNTHECEIIEQLLNRIKGGN--DYDIGVIAPYQAQVSLLRKKF------NGIDVNTVDQFQGKDKDIIFYSCTRCSSNIKDEAKSSESILNDERRLNVAITRAKMKIILVGNRDTLVNFKPFNKLLTLFLKDECIIRV 1014

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000012979 (supercontig:LSalAtl2s:LSalAtl2s98:187656:193333:1 gene:EMLSAG00000012979 transcript:EMLSAT00000012979 description:"maker-LSalAtl2s98-augustus-gene-2.15")

HSP 1 Score: 105.145 bits (261), Expect = 1.277e-23
Identity = 118/440 (26.82%), Postives = 190/440 (43.18%), Query Frame = 0

Query:   32 IIHGPPGTGKTTTLAAAVLSALAN-GDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAA---RLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPES----VTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRP------HDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNK---------QNEIGFLRESRRTNVSITRARRACIAIGD 448
            +I GP GTGKT TL  ++   L +  +++LV   S++A D      L  +  ++    D    V + +     +K L  Y   +++              +  HD +++            L  T   S+ +++     +    +VV T  S  KS     +       V IDEA  A +  A+  +A A+   R++LAGDH+QL P   S  A    FNKS LERL +  P+S      LL   YRSHR I E++S  FY+ ++ A+            G +       P+     +G     ED    ++D    S +N  E + V E V+QL     +         IG++TPY+ QV  +RS +    +  G+ +  V   QG++   I +S VR+ K         + + GFL  ++  N +ITRA+     +GD
Sbjct:  698 LIIGPYGTGKTFTLGQSLKMLLKDRSNRILVCTHSNSAADLYIREYLHPYVTEMKAARDN---VEETETS--PIKVLRVYYENRWV--------------KTVHDTVLKYC----------LVTTTEHSRNFRNPTFEEVVDCHIVVXT-LSTSKSLTGLGLTKGHFTHVLIDEAAQAMECEAIMALALASTQTRVVLAGDHMQLSPEVFSKLALEKKFNKSLLERLYDFYPKSNFPCKILLIENYRSHRAIIEYTSELFYEQKLLAS------------GKQTRHDLWYPLTLFTARG-----ED----VQDLNSTSFYNNAEVYEVVERVTQLQLTWPKSWGRRDETSIGIVTPYYDQVQRIRSEL-RKRNLFGVSVERVLNVQGKQFRAIFLSTVRTRKTCVMSQEDPEVDFGFLSNAKLLNTAITRAQSLVAVVGD 1085

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000010966 (supercontig:LSalAtl2s:LSalAtl2s735:70316:72904:1 gene:EMLSAG00000010966 transcript:EMLSAT00000010966 description:"snap_masked-LSalAtl2s735-processed-gene-0.9")

HSP 1 Score: 50.447 bits (119), Expect = 9.127e-7
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0

Query:  402 YQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGD 448
            +QGRE ++II+S VRS K+  IGFL  S R  V++TRARR    IG+
Sbjct:    2 FQGRENDIIILSLVRSEKET-IGFLSISHRVTVALTRARRGLFLIGN 47

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Match: gi|2498040|sp|Q60560.1|SMBP2_MESAU (RecName: Full=DNA-binding protein SMUBP-2; AltName: Full=ATP-dependent helicase IGHMBP2; AltName: Full=Immunoglobulin mu-binding protein 2; AltName: Full=Insulin II gene enhancer-binding protein; AltName: Full=RIPE3B-binding complex 3B2 p110 subunit; Short=RIP-1)

HSP 1 Score: 236.113 bits (601), Expect = 4.853e-66
Identity = 159/459 (34.64%), Postives = 239/459 (52.07%), Query Frame = 0

Query:    8 YFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAI-LAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVEL-CPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTF 464
            ++N  LD ++  AV      + + IIHGPPGTGKTTT+   +L A+  G K+L  APS+ A D +   + L    +  LG P R +   Q   L   +       +   I  D +     Q   + +  Q  R  +  R   +L   + K L +  ++     L AA VV+ T+          ++     ++V +DE   A +      +  A + ILAGDH QLPP  +S  A   G ++S +ERLVE     +V +LT QYR H+ I+ W+S   Y GQ+ A PSV   LL  L GV +++ T++P++ IDT G    E D      +++ +S  N  E  +V   +  L+   V   DI VI PY  QV LLR  +     +  +EI++VDG+QGREKE +I++FVRSN++ E+GFL E RR NV++TRARR    I DS T++++  LK+L  +
Sbjct:  186 FYNTALDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKILCCAPSNVAVDNLVERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRKDID-----QVFGKNKKTQDKREKSNFRNEIKL---LRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPENHFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTISHKAALAGLSRSLMERLVEKHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGCGLLELD------EEDSQSKGNPGEVRLVTLHIQALVDAGVHAGDIAVIAPYNLQVDLLRQSLSNKHPE--LEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVDY 628

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Match: gi|81917357|sp|Q9EQN5.1|SMBP2_RAT (RecName: Full=DNA-binding protein SMUBP-2; AltName: Full=ATP-dependent helicase IGHMBP2; AltName: Full=Antifreeze enhancer-binding protein ortholog; Short=AEP)

HSP 1 Score: 233.032 bits (593), Expect = 5.717e-65
Identity = 160/460 (34.78%), Postives = 241/460 (52.39%), Query Frame = 0

Query:    8 YFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAI-LAHWPVDILGQPDRGILVRQAQDL-RLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVT-LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTF 464
            ++N  LD ++  AV      + + IIHGPPGTGKTTT+   +L A+  G KVL  APS+ A D +   + L    +  LG P R +   Q   L  +  +S +  IV          R+  Q   + +  Q  R  +  R   +L   + K L +  ++     L AA VV+ T+          ++     ++V +DE   A +      +  A + ILAGDH QLPP  +S  A   G ++S +ERL E    +V  +L  QYR H+ I+ W+S   Y GQ+ A PSV   LL  L GV +++ T++P++ IDT G    E      L +++ +S  N  E  +V   +  L+   V+  DI VI PY  QV LLR  +     +  +EI++VDG+QGREKE +I++FVRSN++ E+GFL E RR NV++TRARR    I DS T++++  LK+L  +
Sbjct:  186 FYNTTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADI------RRDIDQVFGKNKKTQDKREKSNFRNEIKL---LRKELKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGCGLLE------LEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPYNLQVDLLRQSLSNKHPE--LEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDY 628

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Match: gi|730752|sp|P40694.1|SMBP2_MOUSE (RecName: Full=DNA-binding protein SMUBP-2; AltName: Full=ATP-dependent helicase IGHMBP2; AltName: Full=Cardiac transcription factor 1; Short=CATF1; AltName: Full=Immunoglobulin mu-binding protein 2)

HSP 1 Score: 225.328 bits (573), Expect = 2.875e-62
Identity = 159/460 (34.57%), Postives = 237/460 (51.52%), Query Frame = 0

Query:    8 YFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAI-LAHWPVDILGQPDRGILVRQAQDL-RLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVT-LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTF 464
            ++N  LD ++  AV      + L IIHGPPGTGKTTT+   +L A+  G KVL  APS+ A D +   + L    +  LG P R +   Q   L  +  +S +  IV          R+  Q   + +  Q  R     R   +L   + K L +  ++     L AA VV+ T+          ++     ++V +DE   A +      +  A + ILAGDH QLPP  +S  A   G ++S +ERL E     V  +LT QYR H+ I  W+S   Y GQ  + PSV   LL  L GV +++ T +P++ IDT G    E      L +++ +S  N  E  +V   +  L+   V+  DI VI PY  QV LLR  +     +  +EI++VDG+QGREKE ++++FVRSN++ E+GFL E RR NV++TRARR    I DS T++++  L++L  +
Sbjct:  186 FYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADI------RRDIDQVFGKNKKTQDKREKGNFRSEIKL---LRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLLKDLPGVTDTEETRVPLLLIDTAGCGLLE------LEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPYNLQVDLLRQSLSNKHPE--LEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNNHAFLETLVDY 628

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Match: gi|317373494|sp|P38935.3|SMBP2_HUMAN (RecName: Full=DNA-binding protein SMUBP-2; AltName: Full=ATP-dependent helicase IGHMBP2; AltName: Full=Glial factor 1; Short=GF-1; AltName: Full=Immunoglobulin mu-binding protein 2)

HSP 1 Score: 223.787 bits (569), Expect = 1.144e-61
Identity = 161/460 (35.00%), Postives = 238/460 (51.74%), Query Frame = 0

Query:    8 YFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAI-LAHWPVDILGQPDRGILVRQAQDL-RLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVE-LCPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTF 464
            +FN  LD ++  AV      + L IIHGPPGTGKTTT+   +L A+  G KVL  APS+ A D +   + L    +  LG P R +   Q   L  +  +S S  IV          ++  Q   + +  Q  R  +  R   +L   + K L +  ++     L +A VV+ T+          ++     ++V IDE   A +      +  A + ILAGDH QLPP  +S  A   G + S +ERL E      V  LT QYR H+ I  W+S+  Y GQ+ A  SV   LL  L GV  ++ T +P++ +DT G   +E      L +++++S  N  E  +V   +  L+   V   DI V++PY  QV LLR  +     +  +EI++VDG+QGREKE +I+SFVRSN++ E+GFL E RR NV++TRARR    I DS T++++  LK+L  +
Sbjct:  187 FFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADI------RKDIDQVFVKNKKTQDKREKSNFRNEIKL---LRKELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFE------LEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPE--LEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEY 629

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Match: gi|465704|sp|P34243.1|HCS1_YEAST (RecName: Full=DNA polymerase alpha-associated DNA helicase A)

HSP 1 Score: 211.46 bits (537), Expect = 1.019e-58
Identity = 165/500 (33.00%), Postives = 262/500 (52.40%), Query Frame = 0

Query:    5 VSHYFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANG--DKVLVTAPSHAACDAITLAILAHWPVDIL---GQPDRGILVRQAQDLRL------TVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRD------LNLVCIDEAGFARD-QLALHCIAGAA---RLILAGDHLQLPPIYLSPYAQRVGFN--KSFLERLVELCP--ESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGV-----KESKLTTMPMVFIDTKGRQYYEE-DGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSH--NHALKSLFTFCKDNEAV 471
            +  + NPNL++++  A++  A   +LTIIHGPPGTGKT TL   +   L     +++L+  PS+ + D I   +    P ++L   G P R +   +   L +       VK +S+ I +K I  + + +N  Q        +++R   + R     E +  K L  + QS         R+VVTT        L S+   RD       + + IDE   A + Q  +  IA      +L+LAGD+ QLPP   +   + V  N   +  +R++++ P  + V  L  QYR ++ I E+ S+  Y G++ A  +V ++LLI L  V     ++   T +P+++ DT+G ++ E  D   +L      S +N  E  +V+E +  L + NV  + IGVI+PY AQV+ L+ LI  +   + IEI TVDG+QGREK+VII+S VRSN++ E+GFL+E RR NV++TR RR  + +G+ E L    N  LKS   +C++N  V
Sbjct:  200 IKSFLNPNLNDSQKTAIN-FAINNDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNLLLRIGHPARLLDSNKRHSLDILSKKNTIVKDISQEI-DKLIQENKKLKNYKQRKENWNEIKLLRKDLKKR-----EFKTIKDL--IIQS---------RIVVTTLHGSSSRELCSLY--RDDPNFQLFDTLIIDEVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIKIFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGDEFQETADEATILG-----SKYNEGEIAIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAMTRPRRQLVVVGNIEVLQRCGNKYLKSWSEWCEENADV 674

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Match: gi|74676175|sp|O94247.1|HCS1_SCHPO (RecName: Full=DNA polymerase alpha-associated DNA helicase A)

HSP 1 Score: 204.912 bits (520), Expect = 1.504e-56
Identity = 157/456 (34.43%), Postives = 234/456 (51.32%), Query Frame = 0

Query:    8 YFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHW-PVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLEL-EMTKSLSQLYQSLE----RNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLS--PYAQRVGFNKSFLERLVELCPESVT-LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIR--TVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETL 452
            YFN  L+ ++ +AV      + L++IHGPPGTGKT TL   +   +    ++LV   S+ A D I   + +   P+  LG P R  L+    D  L V S +            +  + ++ ++E     + ++     G  + E+ +  + L + Y+  E     N++ A++VV    F  L       + G+  + V IDEA  A +      + G  ++ILAGDH+QL P   S  PY        S  ERLV+   + V   L  QYR H LIS++ S+ FY  ++  A  V+ +LL+ L  V+E++LT  P+ F DT G  Y E+D    +++   +S  N+ EA +V   +S LL   +   DI V+TPY AQV L+R L+     + GIE+   +VD  QGREKE II S VRSN   E+GFL E RR NV+ITR +R    IGDS T+
Sbjct:  205 YFNKELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQQLVLRNKRILVCGASNLAVDNIVDRLSSSGIPMVRLGHPAR--LLPSILDHSLDVLSRTG-----------DNGDVIRGISEDIDVCLSKITKTKNGRERREIYKNIRELRKDYRKYEAKTVANIVSASKVV----FCTLHGAGSRQLKGQRFDAVIIDEASQALEPQCWIPLLGMNKVILAGDHMQLSPNVQSKRPYI-------SMFERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENVEETELTDSPIYFYDTLG-NYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAKDIAVVTPYNAQVALIRQLL----KEKGIEVEMGSVDKVQGREKEAIIFSLVRSNDVREVGFLAEKRRLNVAITRPKRHLCVIGDSNTV 631

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Match: gi|2498043|sp|Q57568.1|Y104_METJA (RecName: Full=Uncharacterized ATP-dependent helicase MJ0104)

HSP 1 Score: 204.912 bits (520), Expect = 1.906e-56
Identity = 156/503 (31.01%), Postives = 250/503 (49.70%), Query Frame = 0

Query:    7 HYFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALA-NGDKVLVTAPSHAACDAITLAILAHWP---VDILGQPDR----------GILVRQAQD------LRLTVKSLSKYIVEKFILSDPEYR-----NQVQALAELR-------HDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESK--------LTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNE 469
             +++ NL+E++  AV      R+L +IHGPPGTGKT T+   ++  +  N  KVL TA S+ A D I   ++  +P   V  +G P R            L+   +       LR  +K + K   +KF+   P +R      Q+  +A+ +        ++IV M      + +++  +  +L ++ + +   +L  A V+V T+ S+  S +     G + +++ IDE   A +   L  I    +LI+AGDH QLPP  LS   +     K+  ERL++  PE  ++L  QYR +  I E+ +  FY  +++A  SV++  L+ L  VKE +        +  +P+ FI+ +G +          +D E  S +N  EA  V E+V +L+   +      VITPY AQV  LR L   +E    IE+ TVDG+QGRE E I++SFVR+      GFL++ RR NV+ITRA+R  I IG+   L  +     +  + K  E
Sbjct:  179 EFYDKNLNESQKLAVKKAVLSRDLYLIHGPPGTGKTRTITEVIVQEVKFNKHKVLATADSNIAADNILEYLIKKYPDLKVVRVGHPTRISKDLIQHSLPYLIENHEKYQEILALREKIKEI-KEQRDKFLKPSPRWRRGMSDEQILKVAKRKKSYRGIPKEKIVSMAEWIIRNKKIK-RIINNLDEITEKIMNEILAEADVIVATN-SMAGSEILK---GWEFDVIVIDEGSQAMEPSCLIPIVKGRKLIMAGDHKQLPPTVLSENEE---LKKTLFERLIKKYPEFSSILEIQYRMNEKIMEFPNKMFYNNKLKADESVKNITLLDL--VKEEEIDEVDRDIINEIPVQFINVEGIER---------KDKESPSYYNIEEAEKVLEIVKKLVKYKI---PTNVITPYDAQVRYLRRLF--EEHNIDIEVNTVDGFQGRENEAIVISFVRT---KNFGFLKDLRRLNVAITRAKRKLILIGNENLLKQDKVYNEMIKWAKSVE 653

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Match: gi|27923995|sp|Q9VYS3.2|RENT1_DROME (RecName: Full=Regulator of nonsense transcripts 1 homolog)

HSP 1 Score: 186.808 bits (473), Expect = 6.874e-49
Identity = 144/470 (30.64%), Postives = 228/470 (48.51%), Query Frame = 0

Query:   11 PNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALA-NGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARD-QLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLL-IHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSG-----IEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNEAVI 472
            P+L+ +++ AV    + R L++I GPPGTGKT T A  V   +  +G  VLV APS+ A D +T  I                +VR     R  + S   ++     + + E  ++++ L +L+ +           + +L     K    L ++ E  +LEAA V+  T        L  +        + IDE+  + + +  +  + GA +LIL GDH QL P+ +   A R G ++S  ERLV L      L   QYR H  +S++ SN+FY+G ++      D+ L +     +  +    PM F+ T+G+   EE  G+        S  N  EA  VE++ ++ L   ++P  IG+ITPY  Q   L   +    S        IEI +VD +QGREK++IIMS VRSN++  IGFL + RR NV++TRA+   I +G+ + L+       L  F KD + ++
Sbjct:  450 PDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKI----------HRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDE-----------TGELSSADEKRYRNLKRAAENQLLEAADVICCTCVGAGDGRLSRV----KFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPER----PMFFLVTQGQ---EEIAGS------GTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLV 879

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Match: gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR (RecName: Full=Regulator of nonsense transcripts 1 homolog)

HSP 1 Score: 180.644 bits (457), Expect = 8.846e-47
Identity = 146/473 (30.87%), Postives = 226/473 (47.78%), Query Frame = 0

Query:   11 PNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAV--LSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAG-FARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLT---GVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQV-----TLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNEAVI 472
            P L+ +++ A+        L++I GPPGTGKT T A  +  L+ ++N  +VLV APS+ A D +   I              G+ V     +RLT KS          L+  E         EL  D +V++  +   + +L  +  K   QL +  ER +L+ A VV  T        L  M        V IDE+   A  +  +  + G  +++L GDH QL P+ ++  A + G N+S  ERLV+L    + L   QYR H  +SE+ SN FY+G ++   +  ++L   +     V E+     PM+F    G +     G          S  N  EA  VE++V++     V+P DIGVITPY  Q      T+  +  +  ES   +E+ +VD +QGREK+ I++S VRSN+   IGFL + RR NV++TRA+   + IG+ + L  +     L    KD + ++
Sbjct:  454 PELNASQIAAIKQVL-SNPLSLIQGPPGTGKTVTSATIIYHLAKMSN-SQVLVCAPSNVAVDQLCERIHR-----------TGLKV-----VRLTAKSREDVESSVSFLALHEQVRMNTTNKEL--DGLVKLKTE---TGELSSQDEKRFKQLTRQAEREILQNADVVCCTCVGAGDPRLSKM----KFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLQFTPIRL-KVQYRMHPCLSEFPSNMFYEGSLQNGVTAAERLRKDVDFPWPVPET-----PMMFWSNLGNEEISASG---------TSYLNRTEAANVEKIVTRFFKAGVKPADIGVITPYEGQRSYIVNTMQNTGTFKKESYREVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLCKHELWHHLLVHFKDKKCLV 884

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Match: gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE (RecName: Full=Regulator of nonsense transcripts 1; AltName: Full=ATP-dependent helicase RENT1; AltName: Full=Nonsense mRNA reducing factor 1; Short=NORF1; AltName: Full=Up-frameshift suppressor 1 homolog; Short=mUpf1)

HSP 1 Score: 180.259 bits (456), Expect = 1.295e-46
Identity = 144/471 (30.57%), Postives = 226/471 (47.98%), Query Frame = 0

Query:   11 PNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAV--LSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGI-LVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARD-QLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADES-----QSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNEAVI 472
            P+L+ +++ AV    + R L++I GPPGTGKT T A  V  L+   NG  VLV APS+ A D +T  I  H           G+ +VR     R  + S   ++     + + +   ++Q L +L+ +           + +L     K    L ++ ER +L  A V+  T        L  M        + IDE+  A + +  +  + GA +LIL GDH QL P+ +   A + G ++S  ERLV L    + L   QYR H  +S + SN FY+G ++   +  D++        +      PM F  T+G++     G          S  N  EA  VE++ ++LL    +P  IG+ITPY  Q + L   +    S        +EI +VD +QGREK+ II+S VR+N+   IGFL + RR NV++TRAR   I +G+ + LS       L ++ K+ +A++
Sbjct:  475 PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNG-PVLVCAPSNIAVDQLTEKI--H---------QTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDE-----------TGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM----QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL-QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD--FQWPQPDKPMFFYVTQGQEEIASSG---------TSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALV 905

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Match: gi|571445544|ref|XP_006576834.1| (PREDICTED: DNA-binding protein SMUBP-2-like isoform X2 [Glycine max] >gi|947118729|gb|KRH66978.1| hypothetical protein GLYMA_03G139000 [Glycine max])

HSP 1 Score: 271.937 bits (694), Expect = 6.107e-79
Identity = 176/474 (37.13%), Postives = 254/474 (53.59%), Query Frame = 0

Query:    2 KSMVSHYFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDP-----EYRNQVQALAELRHDQIVRMGAQ-ARGSSQLELE-MTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHC---IAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVT-LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTF 464
            K + S  FN NLD ++  AV      +N+ ++HGPPGTGKTTT+   +L  +  G K+L  A S+ A D I   ++ H          R  LVR     RL  + L   +  + +  D      + R +++AL    + ++++   +  R   Q EL  ++K   +  Q    +VL++A V++TT        L S       +LV IDEA  A   L + C   I   +R ILAGDHLQLPP   S  A++ G  ++  ERL E+  + +T +LT QYR H LI +WSS   Y  +++A PSV   +L  L GVK +  T   ++ IDT G    E       + DE++S FN  EA V      +L+   V P DIG+ITPY AQV LL+ L   ++    +EI TVDG+QGREKE II+S VRSN + E+GFL + RR NV++TR+RR C  + D+ET+S +  LK L  +
Sbjct:  187 KDVSSTPFNKNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH----------RVKLVRVGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKAL----NGKLLKTKDRNTRKDIQRELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKLDST----SFDLVIIDEAAQA---LEIACWIPILKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMYGDEITSMLTIQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTNSTEPTLLLIDTAGCDMEE-------KKDEEDSTFNEGEAEVTVTHAKRLVQSGVLPSDIGIITPYAAQVVLLKMLKNKEDQLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRSRRQCCLVCDTETVSGDGFLKRLIEY 632

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Match: gi|734332429|gb|KHN07389.1| (DNA-binding protein SMUBP-2 [Glycine soja])

HSP 1 Score: 271.552 bits (693), Expect = 8.101e-79
Identity = 176/474 (37.13%), Postives = 254/474 (53.59%), Query Frame = 0

Query:    2 KSMVSHYFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDP-----EYRNQVQALAELRHDQIVRMGAQ-ARGSSQLELE-MTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHC---IAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVT-LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTF 464
            K + S  FN NLD ++  AV      +N+ ++HGPPGTGKTTT+   +L  +  G K+L  A S+ A D I   ++ H          R  LVR     RL  + L   +  + +  D      + R +++AL    + ++++   +  R   Q EL  ++K   +  Q    +VL++A V++TT        L S       +LV IDEA  A   L + C   I   +R ILAGDHLQLPP   S  A++ G  ++  ERL E+  + +T +LT QYR H LI +WSS   Y  +++A PSV   +L  L GVK +  T   ++ IDT G    E       + DE++S FN  EA V      +L+   V P DIG+ITPY AQV LL+ L   ++    +EI TVDG+QGREKE II+S VRSN + E+GFL + RR NV++TR+RR C  + D+ET+S +  LK L  +
Sbjct:  187 KDVSSTPFNKNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH----------RVKLVRVGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKAL----NGKLLKTKDRNTRKDIQRELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKLDST----SFDLVIIDEAAQA---LEIACWIPILKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMYGDEITSMLTIQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTNSTEPTLLLIDTAGCDMEE-------KKDEEDSTFNEGEAEVTVTHAKRLVQSGVLPSDIGIITPYAAQVVLLKMLKNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRSRRQCCLVCDTETVSGDGFLKRLIEY 632

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Match: gi|947045670|gb|KRG95299.1| (hypothetical protein GLYMA_19G142100 [Glycine max])

HSP 1 Score: 268.085 bits (684), Expect = 3.440e-78
Identity = 172/471 (36.52%), Postives = 254/471 (53.93%), Query Frame = 0

Query:    9 FNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDP-----EYRNQVQALAELRHDQIVRMGAQ-ARGSSQLELE-MTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHC---IAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVT-LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDN 468
            FN NLD ++  AV      +N+ ++HGPPGTGKTTT+   +L  +  G K+L  A S+ A D I   ++ H          R  LVR     RL  + L   +  + +  D      + R +++AL    + ++++   +  R   Q EL  ++K   +  Q    +VL++A V++TT        L S       +LV IDEA  A   L + C   +   +R +LAGDHLQLPP   S  A++ G  ++  ERL E+  + +T +LT QYR H LI +WSS   Y  +++A PSV   +L  L GVK +  T   ++ IDT G    E       + DE++S FN  EA V      +L+   V P DIG+ITPY AQV LL+ L   ++    +EI TVDG+QGREKE II+S VRSN + E+GFL + RR NV++TR+RR C  + D+ET+S +  LK L  + +++
Sbjct:  125 FNKNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH----------RVKLVRLGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKAL----NGKLLKTKDRNTRKDIQRELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKLDST----SFDLVIIDEAAQA---LEIACWIPLLKGSRCVLAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEVYGDEITSMLTVQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTTSTEPTLLLIDTAGCDMEE-------KKDEEDSTFNEGEAEVTVAHAKRLVQSGVIPSDIGIITPYAAQVVLLKMLKNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRSRRQCCLVSDTETVSGDGFLKRLIEYFEEH 567

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Match: gi|955312028|ref|XP_014629252.1| (PREDICTED: DNA-binding protein SMUBP-2-like isoform X1 [Glycine max])

HSP 1 Score: 269.24 bits (687), Expect = 9.336e-78
Identity = 177/483 (36.65%), Postives = 257/483 (53.21%), Query Frame = 0

Query:    2 KSMVSHYFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWPVD---------ILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDP-----EYRNQVQALAELRHDQIVRMGAQ-ARGSSQLELE-MTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHC---IAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVT-LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTF 464
            K + S  FN NLD ++  AV      +N+ ++HGPPGTGKTTT+   +L  +  G K+L  A S+ A D I   ++ H  V          ++    R  LVR     RL  + L   +  + +  D      + R +++AL    + ++++   +  R   Q EL  ++K   +  Q    +VL++A V++TT        L S       +LV IDEA  A   L + C   I   +R ILAGDHLQLPP   S  A++ G  ++  ERL E+  + +T +LT QYR H LI +WSS   Y  +++A PSV   +L  L GVK +  T   ++ IDT G    E       + DE++S FN  EA V      +L+   V P DIG+ITPY AQV LL+ L   ++    +EI TVDG+QGREKE II+S VRSN + E+GFL + RR NV++TR+RR C  + D+ET+S +  LK L  +
Sbjct:  187 KDVSSTPFNKNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRCVKSFVDTLYSFMMTFSARVKLVRVGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKAL----NGKLLKTKDRNTRKDIQRELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKLDST----SFDLVIIDEAAQA---LEIACWIPILKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMYGDEITSMLTIQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTNSTEPTLLLIDTAGCDMEE-------KKDEEDSTFNEGEAEVTVTHAKRLVQSGVLPSDIGIITPYAAQVVLLKMLKNKEDQLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRSRRQCCLVCDTETVSGDGFLKRLIEY 651

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Match: gi|356570496|ref|XP_003553421.1| (PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max] >gi|571557165|ref|XP_006604371.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max] >gi|734389653|gb|KHN26338.1| DNA-binding protein SMUBP-2 [Glycine soja] >gi|947045669|gb|KRG95298.1| hypothetical protein GLYMA_19G142100 [Glycine max])

HSP 1 Score: 268.47 bits (685), Expect = 1.107e-77
Identity = 172/471 (36.52%), Postives = 254/471 (53.93%), Query Frame = 0

Query:    9 FNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDP-----EYRNQVQALAELRHDQIVRMGAQ-ARGSSQLELE-MTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHC---IAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVT-LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDN 468
            FN NLD ++  AV      +N+ ++HGPPGTGKTTT+   +L  +  G K+L  A S+ A D I   ++ H          R  LVR     RL  + L   +  + +  D      + R +++AL    + ++++   +  R   Q EL  ++K   +  Q    +VL++A V++TT        L S       +LV IDEA  A   L + C   +   +R +LAGDHLQLPP   S  A++ G  ++  ERL E+  + +T +LT QYR H LI +WSS   Y  +++A PSV   +L  L GVK +  T   ++ IDT G    E       + DE++S FN  EA V      +L+   V P DIG+ITPY AQV LL+ L   ++    +EI TVDG+QGREKE II+S VRSN + E+GFL + RR NV++TR+RR C  + D+ET+S +  LK L  + +++
Sbjct:  194 FNKNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH----------RVKLVRLGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKAL----NGKLLKTKDRNTRKDIQRELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKLDST----SFDLVIIDEAAQA---LEIACWIPLLKGSRCVLAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEVYGDEITSMLTVQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTTSTEPTLLLIDTAGCDMEE-------KKDEEDSTFNEGEAEVTVAHAKRLVQSGVIPSDIGIITPYAAQVVLLKMLKNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRSRRQCCLVSDTETVSGDGFLKRLIEYFEEH 636

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Match: gi|1025165845|ref|XP_016469997.1| (PREDICTED: DNA-binding protein SMUBP-2-like, partial [Nicotiana tabacum])

HSP 1 Score: 263.077 bits (671), Expect = 1.287e-77
Identity = 169/462 (36.58%), Postives = 245/462 (53.03%), Query Frame = 0

Query:    9 FNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSD-PEYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLER----NVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVT-LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTF 464
            FN NLD ++  A+      +N+ ++HGPPGTGKTTT+   +L     G K+L  A S+ A D I   ++ H          R  LVR     R+  + L   +  + +  D     N ++   +  + ++++  A+ R + +      KSLS+  +  ++    +VL+ A VV+TT    L   L  M      +LV IDEA  A +      +   +R ILAGDHLQLPP   S  A++ G  K+  ERL +L  + +T +LT QYR H+LI  WSS   Y  ++EA  SV   +L HL  VK++  T   ++ ID  G    E       + DE++S  N  EA V      +L+   VR  DIG+ITPY AQV  L+ L   +E    +EI TVDG+QGREKE II+S VRSN + E+GFL + RR NV++TRARR C  + D+ET+S +  LK L  +
Sbjct:    4 FNRNLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEAKRGSKILACAASNIAVDNIVERLVPH----------RVKLVRLGHPARMLPQVLDSALDAQVLRGDNSALANDIRKEMKTLNGKLLK--AKDRNAKRDIRRELKSLSKEERKRQQLAVTDVLKNADVVLTTLTGALSKKLDGM----SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGKTLFERLADLYGDEITSMLTVQYRMHKLIMNWSSGELYDNKIEAHSSVASHMLYHLEDVKKTPSTESTLLLIDIAGCDMEE-------KKDEEDSTLNEGEAEVAIAHAKRLVESGVRASDIGLITPYAAQVVFLKKLKSNEEKLKEMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSGDKFLKRLIEY 442

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Match: gi|1181014143|ref|WP_084427188.1| (AAA family ATPase [Roseimaritima ulvae])

HSP 1 Score: 266.159 bits (679), Expect = 6.885e-77
Identity = 179/477 (37.53%), Postives = 256/477 (53.67%), Query Frame = 0

Query:    9 FNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWP-VDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDP------EYRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQL---YQSLERN----VLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESV-TLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDNEA 470
            F  +L+  +  AV       ++ I+HGPPGTGKTTTLA  +  A+  GD+VL  APS+ A D +   ++A  P V  +G P R              ++L  + +++ + +DP      + R +VQ L      +    G + R +     E+     QL    +SLER+    VL+ A V+ TT+   +   L      R+ +LV IDEA           +  A RL+ AGDH QLPP  LS  A   G   S ++RL++   +SV   LT QYR H  I  +SS+ FY+G + A  SVR   L  L  V E+ LTT P+ FIDT G +Y E+       + + ES  N  EA +V  LV +L+   V+P  IG+I PY AQV LLR  +      +G+E+ TVDG+QGREKEV++++ VRSN   EIGFL ++RRTNV++TRA+R  I IGDS TL+H+    SL  + +  +A
Sbjct:  184 FFSSLNPPQQDAVRFAMAAEDVAILHGPPGTGKTTTLAEVIFQAVQQGDRVLACAPSNTAVDNLLERLVAMLPNVLRVGHPAR------------VFEALRGHTLDELVDNDPSTDVIRDMRREVQDLV-----RAASRGTRGRDAHHRRRELFAEAGQLRGQIRSLERSIIRGVLDRADVICTTT--TIDDDLLG---DREFDLVVIDEACQCTLPSIWQAVLRAQRLVFAGDHCQLPPTVLSDEAAAAGMRDSLMQRLIQREGDSVFRRLTVQYRMHEAIMNFSSDTFYEGSLIADVSVRSHRLHDLPNVIETPLTTQPIEFIDTAGAEYEEQ------LEPDGESKLNPKEATLVVRLVRELMEAGVQPAQIGIIAPYAAQVRLLRGRL----DIAGLEVDTVDGFQGREKEVVLLTMVRSNDSGEIGFLSDTRRTNVALTRAKRKLIMIGDSATLAHHPFYASLLEYFESQDA 628

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Match: gi|593798414|ref|XP_007162245.1| (hypothetical protein PHAVU_001G136200g [Phaseolus vulgaris] >gi|561035709|gb|ESW34239.1| hypothetical protein PHAVU_001G136200g [Phaseolus vulgaris])

HSP 1 Score: 265.003 bits (676), Expect = 1.811e-76
Identity = 170/467 (36.40%), Postives = 252/467 (53.96%), Query Frame = 0

Query:    9 FNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDP-----EYRNQVQALAELRHDQIVRMGAQ-ARGSSQLELE-MTKSLSQLYQSLERNVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHC---IAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESVT-LLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTF 464
            +N NLD+++  AV      +N+ ++HGPPGTGKTTT+   +L  +  G K+L  A S+ A D I   ++ H          R  LVR     RL  + L   +  + +  D      + R +++AL    + ++++   +  R   Q EL  ++K   +  Q    +VL++A V++TT        L S       +LV IDEA  A   L + C   +   +R IL+GDHLQLPP   S  A++ G  ++  ERL E+  + +T +LT QYR H LI +WSS   Y  +++A PSV    L  L GVK++  T   ++ +DT G    E       + DE++S FN  EA V      +L+   V P DIG+ITPY AQV LL+ L   ++    +EI TVDG+QGREKE II+S VRSN + E+GFL + RR NV++TR+RR C  + D+ET+S +  LK L  +
Sbjct:  190 YNRNLDQSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH----------RVKLVRLGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKAL----NGKLLKTKDRNTRKDIQKELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKLDST----SFDLVIIDEAAQA---LEIACWIPLLKGSRCILSGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMYGDEITSMLTVQYRMHELIMDWSSKELYNSKIKAHPSVTAHTLYDLEGVKQTSSTEPTLLLVDTAGCDMEE-------KKDEEDSTFNEGEAEVTVAHAKRLVQSGVLPSDIGIITPYAAQVVLLKMLKNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRSRRQCCLVCDTETVSGDGFLKRLIEY 628

[Close]

BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Match: gi|1201320575|gb|OVA19410.1| (AAA+ ATPase domain [Macleaya cordata])

HSP 1 Score: 263.077 bits (671), Expect = 1.965e-76
Identity = 169/473 (35.73%), Postives = 255/473 (53.91%), Query Frame = 0

Query:    2 KSMVSHYFNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPE-YRNQVQALAELRHDQIVRMGAQARGSSQLELEMTKSLSQLYQSLER----NVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVEL-CPESVTLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDN 468
            KS+    FN NLD ++  A+      +++ ++HGPPGTGKTTT+   +L  +  G K+L  A S+ A D I   ++ H          R  LVR     RL  + L   +  + +  D     N ++   ++ + ++++   + R + +   +  K+LS+  +  ++    +V++ A VV+TT    +   L S       +LV IDEA  A +      +    R +LAGDHLQLPP   S  A+R G  ++  ERL +L   +++ +LT QYR H LI EWSS   Y+ +++A PSV   +L  L  VK+S  T   ++ ID  G    E       + DE++S  N  EA V      +L+   VR  DIG+ITPY AQV LL+ +   D+    +EI TVDG+QGREKE II+S VRSN +NE+GFL + RR NV++TRARR C  I D+ET+S +  LK L  + ++N
Sbjct:  118 KSVSFTPFNSNLDHSQKDAISKALSSKDVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH----------RVKLVRVGHPARLLPQVLESALDAQVLRGDNSGLANDIRKEMKVLNGKLLK--TKDRNTKRDIRKELKTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVTRKLEST----SFDLVIIDEAAQALEIACWIALLKGTRCLLAGDHLQLPPTIQSVEAERKGLGRTLFERLADLYGDDAMAMLTVQYRMHELIMEWSSKELYESKIKAHPSVAGHMLYDLEDVKKSSSTESTLLLIDIAGCDMEE-------KKDEEDSTMNEGEADVAIAHAKRLIESGVRSSDIGIITPYAAQVVLLKMIRSKDDKLKELEISTVDGFQGREKEAIIISMVRSNSKNEVGFLSDRRRMNVAVTRARRQCCLICDTETVSSDRFLKRLVEYFEEN 567

[Close]

BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Match: gi|695071222|ref|XP_009382674.1| (PREDICTED: DNA-binding protein SMUBP-2 isoform X2 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 263.462 bits (672), Expect = 2.124e-76
Identity = 174/470 (37.02%), Postives = 247/470 (52.55%), Query Frame = 0

Query:    9 FNPNLDEAKLRAVDDCARCRNLTIIHGPPGTGKTTTLAAAVLSALANGDKVLVTAPSHAACDAITLAILAHWPVDILGQPDRGILVRQAQDLRLTVKSLSKYIVEKFILSDPEYRNQVQALA-ELRHDQIVRMGAQARGSSQ-LELEMTKSLSQLYQSLER-------NVLEAARVVVTTSFSVLKSHLFSMVVGRDLNLVCIDEAGFARDQLALHCIAGAARLILAGDHLQLPPIYLSPYAQRVGFNKSFLERLVELCPESV-TLLTTQYRSHRLISEWSSNYFYQGQVEAAPSVRDQLLIHLTGVKESKLTTMPMVFIDTKGRQYYEEDGGNLLRDDEDESIFNYNEAFVVEELVSQLLALNVRPHDIGVITPYWAQVTLLRSLIWADESQSGIEIRTVDGYQGREKEVIIMSFVRSNKQNEIGFLRESRRTNVSITRARRACIAIGDSETLSHNHALKSLFTFCKDN 468
            FN NLD ++  AV     C+++ ++HGPPGTGKTTT+   +L  +  G K+L  A S+ A D I   +           P R  LVR     RL  + L   +  + +      R    ALA ++R +  V  G   +   +  + ++ K L  L +   +       +V++ A VV+TT    L       + G   +LV IDEA  A +      +    R +LAGDHLQLPP   S  A+R G  K+  ERL  L  E V ++LT QYR H LI  WSS  FY  +V+A  SV   +L  + GVK S  TT  ++ IDT G    E       + DE+ES  N  EA V      QL+   V+  DIG+ITPY AQVT L+ +   +     +EI TVDG+QGREKE I++S VRSN + E+GFL + RR NV++TRARR C  + D++T+SH++ LK L  + +++
Sbjct:  132 FNKNLDHSQRDAVLKSLSCKDVFLLHGPPGTGKTTTVIEIILQEVKRGSKILACAASNIAVDNIVERLF----------PFRVKLVRLGHPARLLPQVLESALDAQVL------RGDNSALANDIRKEMKVLSGKLLKAKDRNTKRDIRKELRTLAKEERKRQQLAVTDVIKRADVVLTT----LTGAFSRKLEGSAFDLVIIDEAAQALEVACWIALLKGPRCVLAGDHLQLPPTIQSVEAERKGLGKTLFERLAGLYGEEVMSMLTVQYRMHELIMNWSSKEFYDNKVKAHSSVAAHMLHDVEGVKSSSSTTPTLLLIDTAGCDMDE-------KKDEEESTMNEGEAAVTIAHAKQLIEYGVQAPDIGIITPYAAQVTYLKMMRSKENILKDVEISTVDGFQGREKEAIVISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCLVCDTDTVSHDNFLKRLIEYFEEH 574

The following BLAST results are available for this feature:

BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr

BLAST of dna-binding protein smubp-2-like isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 9


Match Name	E-value	Identity	Description
EMLSAG00000000606	9.986e-82	40.46	supercontig:LSalAtl2s:LSalAtl2s109:446994:450007:1...	[more]
EMLSAG00000009428	5.561e-65	35.06	supercontig:LSalAtl2s:LSalAtl2s600:488026:492190:-...	[more]
EMLSAG00000005015	3.679e-46	31.82	supercontig:LSalAtl2s:LSalAtl2s260:591600:598646:1...	[more]
EMLSAG00000010050	1.586e-33	31.35	supercontig:LSalAtl2s:LSalAtl2s662:147778:155854:1...	[more]
EMLSAG00000003665	5.671e-33	27.17	supercontig:LSalAtl2s:LSalAtl2s19:264402:269259:-1...	[more]
EMLSAG00000004276	5.716e-31	26.39	supercontig:LSalAtl2s:LSalAtl2s224:316115:320975:1...	[more]
EMLSAG00000003094	4.484e-27	26.14	supercontig:LSalAtl2s:LSalAtl2s173:343286:346696:-...	[more]
EMLSAG00000012979	1.277e-23	26.82	supercontig:LSalAtl2s:LSalAtl2s98:187656:193333:1 ...	[more]
EMLSAG00000010966	9.127e-7	53.19	supercontig:LSalAtl2s:LSalAtl2s735:70316:72904:1 g...	[more]

BLAST of dna-binding protein smubp-2-like isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|2498040\|sp\|Q60560.1\|SMBP2_MESAU	4.853e-66	34.64	RecName: Full=DNA-binding protein SMUBP-2; AltName...	[more]
gi\|81917357\|sp\|Q9EQN5.1\|SMBP2_RAT	5.717e-65	34.78	RecName: Full=DNA-binding protein SMUBP-2; AltName...	[more]
gi\|730752\|sp\|P40694.1\|SMBP2_MOUSE	2.875e-62	34.57	RecName: Full=DNA-binding protein SMUBP-2; AltName...	[more]
gi\|317373494\|sp\|P38935.3\|SMBP2_HUMAN	1.144e-61	35.00	RecName: Full=DNA-binding protein SMUBP-2; AltName...	[more]
gi\|465704\|sp\|P34243.1\|HCS1_YEAST	1.019e-58	33.00	RecName: Full=DNA polymerase alpha-associated DNA ...	[more]
gi\|74676175\|sp\|O94247.1\|HCS1_SCHPO	1.504e-56	34.43	RecName: Full=DNA polymerase alpha-associated DNA ...	[more]
gi\|2498043\|sp\|Q57568.1\|Y104_METJA	1.906e-56	31.01	RecName: Full=Uncharacterized ATP-dependent helica...	[more]
gi\|27923995\|sp\|Q9VYS3.2\|RENT1_DROME	6.874e-49	30.64	RecName: Full=Regulator of nonsense transcripts 1 ...	[more]
gi\|18202963\|sp\|Q9HEH1.1\|RENT1_NEUCR	8.846e-47	30.87	RecName: Full=Regulator of nonsense transcripts 1 ...	[more]
gi\|150387852\|sp\|Q9EPU0.2\|RENT1_MOUSE	1.295e-46	30.57	RecName: Full=Regulator of nonsense transcripts 1;...	[more]

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BLAST of dna-binding protein smubp-2-like isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|571445544\|ref\|XP_006576834.1\|	6.107e-79	37.13	PREDICTED: DNA-binding protein SMUBP-2-like isofor...	[more]
gi\|734332429\|gb\|KHN07389.1\|	8.101e-79	37.13	DNA-binding protein SMUBP-2 [Glycine soja]	[more]
gi\|947045670\|gb\|KRG95299.1\|	3.440e-78	36.52	hypothetical protein GLYMA_19G142100 [Glycine max]	[more]
gi\|955312028\|ref\|XP_014629252.1\|	9.336e-78	36.65	PREDICTED: DNA-binding protein SMUBP-2-like isofor...	[more]
gi\|356570496\|ref\|XP_003553421.1\|	1.107e-77	36.52	PREDICTED: DNA-binding protein SMUBP-2-like [Glyci...	[more]
gi\|1025165845\|ref\|XP_016469997.1\|	1.287e-77	36.58	PREDICTED: DNA-binding protein SMUBP-2-like, parti...	[more]
gi\|1181014143\|ref\|WP_084427188.1\|	6.885e-77	37.53	AAA family ATPase [Roseimaritima ulvae]	[more]
gi\|593798414\|ref\|XP_007162245.1\|	1.811e-76	36.40	hypothetical protein PHAVU_001G136200g [Phaseolus ...	[more]
gi\|1201320575\|gb\|OVA19410.1\|	1.965e-76	35.73	AAA+ ATPase domain [Macleaya cordata]	[more]
gi\|695071222\|ref\|XP_009382674.1\|	2.124e-76	37.02	PREDICTED: DNA-binding protein SMUBP-2 isoform X2 ...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold522_size146686	supercontig	scaffold522_size146686:141696..145369 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold522_size146686-processed-gene-0.13-mRNA-1	snap_masked-scaffold522_size146686-processed-gene-0.13-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold522_size146686:141696..145369-

gene from alignment at scaffold522_size146686:141696..145369-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold522_size146686-processed-gene-0.13 ID=snap_masked-scaffold522_size146686-processed-gene-0.13|Name=dna-binding protein smubp-2-like isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=3674bp|location=Sequence derived from alignment at scaffold522_size146686:141696..145369- (Tigriopus kingsejongensis)
ATGAAATCCATGGTTAGGTAAACGCTCTCTAGGTGGAGTTAAAAAACACA
AAAACAACGGAAGCTCAAGACGTCGAACAATCCAGCTTGGCATTCAAAAA
TGCATTGATCAATGAAACAAAAAAGCCTTGTATTTGAATTGACCAGCTAT
TGGGGTTACCATTGACGGATGATATTAGCCTTACGACCTGAGTTCCACGC
GTTTCGATTCATCATCAAGAGTGATGAGTACTTGTTAAACCATGTCCCAA
CACGTTTGACTGGTATGTTTTTGCTATTTGTTGACTCTCAGGCATGACCT
TATAAAGATTTTAGGGATACAATTGAATAATACGTACATCTACTAGACAC
TTGATTCTTGGTTGGCGTTTACAAATCAAAGCGATGGATGATTTAGGTGC
TAGAAAATATTCCTTAGGCCAGGCTTCTATGAAACACTGCGTTGATTCTT
TATTCCTAATCGAAATGTTTTCCCAAGTATTTGCATTTAACTAACTCATA
TTCGTAATCTTGAACCTGACCTCAGTCCAATGACTGGTGACATATTTCAA
GAAAATACGCCCTCCTCGAGATACAGATAAACTGGGACTCGGTTTTTTAA
CTTCATATCTTTAAATGACTTGCTGATTGTAAAATTGCATTAATACCAAA
CTTGCCCATGATTCTTACGTACTTGTTGAGCTTTTTACTTTTCAAACAAA
ACCTCGTTTGCGTCCACAACGGCCTTGAAGCTGCGGGTGGTGGACATGGT
CACGGCACGCTCCTCCTCTGCTGATATTACTGCCCACAACTTGGCCAGGT
TGCTTGTTAGAACGTTAATATTTGGCACCGACTTGAGGCAGAGCCTACTC
TCAAAGATAGACCGGATCAAAAAGGTCCACGGGTTCATGGGACTGAGATT
AGAGTTGCTAAGTGGCCAGACTTCCCTCTCCCAAAAGTTGTTGAACGCTT
CCCGGCTGAACATTTGCACGAGTTTGGTTGTGTGAAATGGCTGTTTATGC
TATTGGAACTTTGTTGAGCCGTTTCAATACTCGACCTCAACNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGCTCAGAGGAGCAGACCCAGACCAGCCACTACTTCAACCCCAA
TCTGGATGAGGCCAAACTAAGGGCCGTGGACGACTGTGCCCGGTGTCGGA
ATCTCACCATCATTCATGGTCCTCCGGGCACGGGCAAAACCACCACCTTG
GCCGCGGCTGTGCTCTCAGCCTTGGCGAACGGCGACAAAGTCCTGGTCAC
AGCTCCTAGTCACGCGGCGTGTGACGCCATCACCTTGGCCATCTTGGCCC
ATTGGCCCGTCGACATTTTGGGCCAGCCCGACCGCGGTATTCTAGTGCGC
CAAGCCCAAGACTTGAGACTGACGGTGAAAAGCCTCTCGAAATATATCGT
GGAAAAGTTCATTCTCAGCGATCCGGAGTACCGTAACCAAGTCCAGGCCT
TGGCCGAGCTGAGACACGATCAGATTGTGCGCATGGGTGCGCAGGCTCGT
GGTAGCTCGCAGCTGGAGCTGGAAATGACCAAGTCCCTGAGTCAATTGTA
CCAAAGCTTGGAGCGGAACGTACTGGAGGCAGCCCGGGTGGTGGTCACCA
CCAGTTTCTCGGTCCTCAAATCCCACTTATTTTCCATGGTGGTGGGGCGT
GACTTAAACCTGGTGTGCATCGACGAAGCCGGATTTGCTCGGGATCAACT
CGCCCTCCATTGTATTGCCGGAGCAGCCCGCCTAATCCTGGCCGGTGATC
ATCTGCAGCTCCCTCCCATCTACCTCTCCCCGTATGCCCAGCGAGTTGGC
TTCAACAAGAGCTTCTTGGAGCGGCTAGTGGAGCTGTGTCCGGAAAGCGT
GACCCTCCTTACCACACAGTATCGTTCACATCGACTGATATCGGAGTGGA
GCTCAAATTACTTCTACCAGGGCCAGGTGGAGGCTGCACCCTCGGTCCGG
GACCAATTGTTGATACATTTGACGGGGGTGAAGGAGTCCAAGCTCACGAC
CATGCCGATGGTCTTCATCGACACCAAGGGCAGGCAGTACTATGAAGAGG
ATGGCGGAAACCTACTCCGGGACGATGAGGACGAGTCCATTTTTAACTAC
AATGAAGCGTTTGTGGTGGAGGAGCTCGTGAGCCAATTATTGGCGTTAAA
CGTTCGACCCCACGATATCGGAGTGATCACCCCCTATTGGGCCCAAGTCA
CACTCCTGAGGTCACTGATTTGGGCCGATGAGTCCCAAAGTGGCATCGAA
ATCCGCACCGTTGACGGTTACCAAGGGCGGGAGAAGGAGGTCATCATCAT
GAGCTTTGTCCGATCCAACAAGCAGAACGAGATCGGATTCCTCCGAGAAT
CTCGAAGAACCAACGTCTCTATCACCCGGGCCAGACGGGCTTGCATTGCC
ATCGGGGATTCCGAAACGTTGAGTCATAATCACGCTCTGAAAAGTTTGTT
CACCTTTTGTAAGGACAATGAGGCTGTGATTCCTGTGAGTGAAGTTTTCT
GATCCAGGTCTTAAAGACTTGTTTGATTTGGCTTCAAAATCAGGTTGCCA
CCAAGGAAGATAAGCATTTGGCATGGGGGATGATAATAAACAACTCGTGG
CCAATCCCTGGCGGTTGGTGCGAGAGGAATGTGCTCCTCCTACCTCACAT
CATGGAGAAATGGGTGGTCTTCCTTCTGGTTCTCGTGTTCGCCTTGACCC
TGAAAACCCTCCAATCTTTGTGTCAATACTGCTTGAAGAGGGAGGAGACA
AGACAAGACCAGAGATTGGAGTCATGTGTCCATCAGAGTGAAGAGGAGCA
ATATTACGTCGAAGTTCTGAACCAGGGCTTCAATCCCAACGAAGACGTGC
TCGCCCAGTCGCACCAACAGCAGTGCGAAGTGGTGCTGGCAGCGTCCAAA
GAGGAACTCTCGAAGCCCGAATGA

Synonyms

The feature 'dna-binding protein smubp-2-like isoform x1' has the following synonyms


Synonym
Tk03527

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