eukaryotic translation initiation factor 5a, snap_masked-scaffold627_size122700-processed-gene-0.15 (gene) Tigriopus kingsejongensis

Overview
Nameeukaryotic translation initiation factor 5a
Unique Namesnap_masked-scaffold627_size122700-processed-gene-0.15
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of eukaryotic translation initiation factor 5a vs. L. salmonis genes
Match: EMLSAG00000000897 (supercontig:LSalAtl2s:LSalAtl2s1157:162526:164042:1 gene:EMLSAG00000000897 transcript:EMLSAT00000000897 description:"maker-LSalAtl2s1157-augustus-gene-1.14")

HSP 1 Score: 268.47 bits (685), Expect = 4.004e-94
Identity = 127/158 (80.38%), Postives = 138/158 (87.34%), Query Frame = 0 
Query:    1 MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            MAD++DF  GDAG+S TFPMQCSALRKNG VMIK RPCKIVEMSTSKTGKHGHAKVHMV LDIF  KKYEDICPSTHNMDVPNV RKDYQLLD+ DD +LSLMDD GNTRDDLRVP+ +IG EI+ AI + RDILC VL ACGEE+V+ATK NTAVDK
Sbjct:    1 MADEFDFGEGDAGASETFPMQCSALRKNGFVMIKGRPCKIVEMSTSKTGKHGHAKVHMVALDIFTQKKYEDICPSTHNMDVPNVKRKDYQLLDI-DDGFLSLMDDSGNTRDDLRVPEGEIGDEIKVAIAESRDILCXVLSACGEESVIATKVNTAVDK 157
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BLAST of eukaryotic translation initiation factor 5a vs. L. salmonis genes
Match: EMLSAG00000011049 (supercontig:LSalAtl2s:LSalAtl2s744:105861:106334:-1 gene:EMLSAG00000011049 transcript:EMLSAT00000011049 description:"augustus-LSalAtl2s744-processed-gene-1.14")

HSP 1 Score: 260.766 bits (665), Expect = 5.105e-91
Identity = 123/158 (77.85%), Postives = 137/158 (86.71%), Query Frame = 0 
Query:    1 MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            MA ++DF+ GDAG+S TFP+QCSALRKNG+VMIK RPCKIVEMSTSKTGKHGHAKVHMV LDIF  KKYEDICPSTHNMDVPNV RKDYQLLD+ DD +LSLMDD GNTRDDLRVP+ +IG EI++AI + RDILC VL A GEEAV ATK  +AVDK
Sbjct:    1 MAXEFDFAEGDAGASETFPIQCSALRKNGYVMIKGRPCKIVEMSTSKTGKHGHAKVHMVALDIFTQKKYEDICPSTHNMDVPNVKRKDYQLLDI-DDGFLSLMDDAGNTRDDLRVPEGEIGDEIKAAIAESRDILCNVLSAXGEEAVXATKVXSAVDK 157
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Match: gi|51702278|sp|P62924.1|IF5A_SPOEX (RecName: Full=Eukaryotic translation initiation factor 5A; Short=eIF-5A >gi|51702279|sp|P62925.1|IF5A_SPOFR RecName: Full=Eukaryotic translation initiation factor 5A; Short=eIF-5A)

HSP 1 Score: 248.825 bits (634), Expect = 7.181e-85
Identity = 114/160 (71.25%), Postives = 138/160 (86.25%), Query Frame = 0 
Query:    1 MAD--DYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            MAD  D  F TGD+G+S+TFPMQCSALRKNG VM+K RPCKIVEMSTSKTGKHGHAKVH+VG+DIFN KKYEDICPSTHNMDVP+V R+DYQL D+SDD YL+LM D G+ R+DL++PD D+GT++RS  + G+++LCTVL +CGEE V+A K NTA+DK
Sbjct:    1 MADIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVKANTALDK 160
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Match: gi|25090601|sp|Q9GU68.2|IF5A_DROME (RecName: Full=Eukaryotic translation initiation factor 5A; Short=eIF-5A)

HSP 1 Score: 240.35 bits (612), Expect = 1.430e-81
Identity = 107/155 (69.03%), Postives = 135/155 (87.10%), Query Frame = 0 
Query:    4 DYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            D  F T D+G+S+T+PMQCSALRKNG VM+K+RPCKIVEMSTSKTGKHGHAKVHMVG+DIF+NKKYEDICPSTHNMDVPNV R+D QL+ +SDD++L+LM + G+ R+DL+VP+ ++G ++R   + G+D+LCTVL ACGEE V+A KTNTA+DK
Sbjct:    5 DDQFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Match: gi|124231|sp|P10160.2|IF5A1_RABIT (RecName: Full=Eukaryotic translation initiation factor 5A-1; Short=eIF-5A-1; Short=eIF-5A1; AltName: Full=Eukaryotic initiation factor 5A isoform 1; Short=eIF-5A; AltName: Full=eIF-4D)

HSP 1 Score: 226.098 bits (575), Expect = 7.110e-76
Identity = 104/152 (68.42%), Postives = 121/152 (79.61%), Query Frame = 0 
Query:    1 MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKT 152
            MADD DF TGDAG+S+TFPMQCSALRKNG V++K RPCKIVEMSTSKTGKHGHAKVH+VG+DIF  KKYEDICPSTHNMDVPN+ R D+QL+ +  D YLSL+ D G  R+DLR+P+ D+G EI    + G +IL TVL A  EEA VA K 
Sbjct:    1 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQ-DGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDSGEEILITVLSAMTEEAAVAIKA 151
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Match: gi|54035971|sp|Q6EWQ7.3|IF5A1_BOVIN (RecName: Full=Eukaryotic translation initiation factor 5A-1; Short=eIF-5A-1; Short=eIF-5A1; AltName: Full=Eukaryotic initiation factor 5A isoform 1; Short=eIF-5A; AltName: Full=eIF-4D >gi|54037409|sp|P63241.2|IF5A1_HUMAN RecName: Full=Eukaryotic translation initiation factor 5A-1; Short=eIF-5A-1; Short=eIF-5A1; AltName: Full=Eukaryotic initiation factor 5A isoform 1; Short=eIF-5A; AltName: Full=Rev-binding factor; AltName: Full=eIF-4D >gi|54037410|sp|P63242.2|IF5A1_MOUSE RecName: Full=Eukaryotic translation initiation factor 5A-1; Short=eIF-5A-1; Short=eIF-5A1; AltName: Full=Eukaryotic initiation factor 5A isoform 1; Short=eIF-5A; AltName: Full=eIF-4D >gi|91207082|sp|Q3T1J1.3|IF5A1_RAT RecName: Full=Eukaryotic translation initiation factor 5A-1; Short=eIF-5A-1; Short=eIF-5A1; AltName: Full=Eukaryotic initiation factor 5A isoform 1; Short=eIF-5A; AltName: Full=eIF-4D)

HSP 1 Score: 223.787 bits (569), Expect = 4.734e-75
Identity = 104/152 (68.42%), Postives = 121/152 (79.61%), Query Frame = 0 
Query:    1 MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKT 152
            MADD DF TGDAG+S+TFPMQCSALRKNG V++K RPCKIVEMSTSKTGKHGHAKVH+VG+DIF  KKYEDICPSTHNMDVPN+ R D+QL+ +  D YLSL+ D G  R+DLR+P+ D+G EI    + G +IL TVL A  EEA VA K 
Sbjct:    1 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQ-DGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIKA 151
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Match: gi|190359775|sp|Q6IS14.2|IF5AL_HUMAN (RecName: Full=Eukaryotic translation initiation factor 5A-1-like; Short=eIF-5A-1-like; Short=eIF-5A1-like; AltName: Full=Eukaryotic initiation factor 5A isoform 1-like)

HSP 1 Score: 216.468 bits (550), Expect = 3.466e-72
Identity = 101/152 (66.45%), Postives = 118/152 (77.63%), Query Frame = 0 
Query:    1 MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKT 152
            MADD DF TGDAG+S+TFPMQCSALRKNG V++K  PCKIVEMS SKTGKHGHAKVH+VG+DIF  KKYEDICPSTHNMDVPN+ R D+QL+ +  D YLSL+ D G   +DLR+P+ D+G EI    + G +IL TVL A  EEA VA K 
Sbjct:    1 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQ-DGYLSLLQDSGEVPEDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIKA 151
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Match: gi|585302|sp|Q07460.3|IF5A2_CHICK (RecName: Full=Eukaryotic translation initiation factor 5A-2; Short=eIF-5A-2; Short=eIF-5A2; AltName: Full=Eukaryotic initiation factor 5A isoform 2; AltName: Full=eIF-4D)

HSP 1 Score: 214.157 bits (544), Expect = 2.809e-71
Identity = 98/151 (64.90%), Postives = 119/151 (78.81%), Query Frame = 0 
Query:    1 MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATK 151
            MAD+ DF+TGDAG+SST+PMQCSALRKNG V++K RPCKIVEMSTSKTGKHGHAKVH+VG+DIFN KKYEDICPSTHNMDVPN+ R DYQL+ +  D YLSL+ + G  R+DL++P+ D+G EI        D+  +V+ A  EE  VA K
Sbjct:    1 MADELDFTTGDAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPNIKRNDYQLIGIQ-DGYLSLLTESGEVREDLKLPEGDLGKEIEGKFNANEDVQISVISAMNEECAVAIK 150
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Match: gi|74762725|sp|Q9GZV4.3|IF5A2_HUMAN (RecName: Full=Eukaryotic translation initiation factor 5A-2; Short=eIF-5A-2; Short=eIF-5A2; AltName: Full=Eukaryotic initiation factor 5A isoform 2 >gi|75070624|sp|Q5R898.3|IF5A2_PONAB RecName: Full=Eukaryotic translation initiation factor 5A-2; Short=eIF-5A-2; Short=eIF-5A2; AltName: Full=Eukaryotic initiation factor 5A isoform 2 >gi|81913122|sp|Q8BGY2.3|IF5A2_MOUSE RecName: Full=Eukaryotic translation initiation factor 5A-2; Short=eIF-5A-2; Short=eIF-5A2; AltName: Full=Eukaryotic initiation factor 5A isoform 2)

HSP 1 Score: 211.46 bits (537), Expect = 3.980e-70
Identity = 97/151 (64.24%), Postives = 119/151 (78.81%), Query Frame = 0 
Query:    1 MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATK 151
            MAD+ DF+TGDAG+SST+PMQCSALRKNG V++K RPCKIVEMSTSKTGKHGHAKVH+VG+DIF  KKYEDICPSTHNMDVPN+ R DYQL+ +  D YLSL+ + G  R+DL++P+ ++G EI      G D+  +V+ A  EE  VA K
Sbjct:    1 MADEIDFTTGDAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICIQ-DGYLSLLTETGEVREDLKLPEGELGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Match: gi|1160421818|sp|O94083.2|IF5A_CANAL (RecName: Full=Eukaryotic translation initiation factor 5A; Short=eIF-5A; AltName: Full=eIF-4D)

HSP 1 Score: 211.46 bits (537), Expect = 4.901e-70
Identity = 92/149 (61.74%), Postives = 126/149 (84.56%), Query Frame = 0 
Query:    3 DDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATK 151
            +D+ F T DAG++ TFPMQCSALRKNGHV+IKNRPCKIV+MSTSKTGKHGHAKVH+V +DIF  KK ED+ PSTHNM+VPNV+R+++QLLD+ DD YLSLM   G+T+DD++VP+ ++G +++S  ++G+D++ T++ A GEEA ++ K
Sbjct:    4 EDHTFETADAGAALTFPMQCSALRKNGHVVIKNRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPNVSRQEFQLLDI-DDGYLSLMTADGDTKDDVKVPEGELGDKLQSEFDEGKDLIVTIISAMGEEAAISYK 151
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Match: gi|395398443|sp|Q9UST4.2|IF5A2_SCHPO (RecName: Full=Eukaryotic translation initiation factor 5A-2; Short=eIF-5A-2)

HSP 1 Score: 204.142 bits (518), Expect = 4.159e-67
Identity = 93/146 (63.70%), Postives = 118/146 (80.82%), Query Frame = 0 
Query:    6 DFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATK 151
            DF  G+AG+S TFPMQCSALRKNGHV+IK RPCKIV+MSTSKTGKHGHAKVH+V LDIFN +KYED+ PSTHNMDVP V R +YQL+++ DD YL+LM   G T+DD+R+P+ ++G EI    E+G+D++ TV+ A GEE  +A +
Sbjct:   20 DFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHIVALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGELGNEIEEGFEEGKDLIITVVSAMGEEIALACR 164
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Match: gi|3024014|sp|P56289.1|IF5A1_SCHPO (RecName: Full=Eukaryotic translation initiation factor 5A-1; Short=eIF-5A-1)

HSP 1 Score: 203.756 bits (517), Expect = 5.023e-67
Identity = 93/146 (63.70%), Postives = 118/146 (80.82%), Query Frame = 0 
Query:    6 DFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATK 151
            DF  G+AG+S TFPMQCSALRKNGHV+IK RPCKIV+MSTSKTGKHGHAKVH+V LDIFN +KYED+ PSTHNMDVP V R +YQL+++ DD YL+LM   G T+DD+R+P+ ++G EI    ++GRD++ TV+ A GEE  +A +
Sbjct:    8 DFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHIVALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGELGNEIEEGFDEGRDLIITVVSAMGEETALACR 152
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BLAST of eukaryotic translation initiation factor 5a vs. nr
Match: gi|225713344|gb|ACO12518.1| (Eukaryotic translation initiation factor 5A [Lepeophtheirus salmonis] >gi|290563054|gb|ADD38921.1| Eukaryotic translation initiation factor 5A [Lepeophtheirus salmonis])

HSP 1 Score: 270.396 bits (690), Expect = 6.484e-91
Identity = 126/158 (79.75%), Postives = 141/158 (89.24%), Query Frame = 0 
Query:    1 MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            MAD++DF+ GDAG+S TFP+QCSALRKNG+VMIK RPCKIVEMSTSKTGKHGHAKVHMV LDIF  KKYEDICPSTHNMDVPNV RKDYQLLD+ DD +LSLMDD GNTRDDLRVP+ +IG EI++AI + RDILC VL ACGEEAV+ATK N+AVDK
Sbjct:    1 MADEFDFAEGDAGASETFPIQCSALRKNGYVMIKGRPCKIVEMSTSKTGKHGHAKVHMVALDIFTQKKYEDICPSTHNMDVPNVKRKDYQLLDI-DDGFLSLMDDAGNTRDDLRVPEGEIGDEIKAAIAESRDILCNVLSACGEEAVIATKVNSAVDK 157
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BLAST of eukaryotic translation initiation factor 5a vs. nr
Match: gi|225708862|gb|ACO10277.1| (Eukaryotic translation initiation factor 5A [Caligus rogercresseyi])

HSP 1 Score: 268.085 bits (684), Expect = 4.518e-90
Identity = 127/158 (80.38%), Postives = 138/158 (87.34%), Query Frame = 0 
Query:    1 MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            MAD++DF  GDAG+S TFP+QCS+LRKNG VMIK RPCKIVEMSTSKTGKHGHAKVH+V LDIF  KKYEDICPSTHNMDVPNV RKDYQLLD+ DD +LSLMDD G TRDDLRVP  DIG EI SA+E+ RDILCTVL ACGEEAV+ATK NTAVDK
Sbjct:    1 MADEFDFGEGDAGASETFPLQCSSLRKNGFVMIKGRPCKIVEMSTSKTGKHGHAKVHLVALDIFTQKKYEDICPSTHNMDVPNVKRKDYQLLDI-DDGFLSLMDDSGATRDDLRVPSGDIGDEITSAVEESRDILCTVLSACGEEAVIATKINTAVDK 157
[Close]
BLAST of eukaryotic translation initiation factor 5a vs. nr
Match: gi|225717586|gb|ACO14639.1| (Eukaryotic translation initiation factor 5A [Caligus clemensi])

HSP 1 Score: 267.7 bits (683), Expect = 6.930e-90
Identity = 129/158 (81.65%), Postives = 139/158 (87.97%), Query Frame = 0 
Query:    1 MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            MAD +DF+ GDAG+S TFPMQCS+LRKNG VMIK+RPCKIVEMSTSKTGKHG AKVH+V LDIF  KKYEDICPSTHNMDVPNV RKDYQLLD+ DD YLSLMDD G TRDDLRVP  +IG EI SAIE+GRDILCTVL ACGEEAV+ATK NTAVDK
Sbjct:    1 MADGFDFAEGDAGASETFPMQCSSLRKNGFVMIKSRPCKIVEMSTSKTGKHGLAKVHLVALDIFTQKKYEDICPSTHNMDVPNVKRKDYQLLDI-DDGYLSLMDDTGATRDDLRVPTGEIGDEINSAIEEGRDILCTVLSACGEEAVIATKINTAVDK 157
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BLAST of eukaryotic translation initiation factor 5a vs. nr
Match: gi|961375820|gb|ALS04654.1| (eukaryotic translation initiation factor 5A [Pseudodiaptomus poplesia])

HSP 1 Score: 256.529 bits (654), Expect = 1.992e-85
Identity = 125/159 (78.62%), Postives = 139/159 (87.42%), Query Frame = 0 
Query:    1 MADD-YDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            MAD+ +DF  GDAG+S+TFPMQCSALRKNG VMIKNRPCKIVEMSTSKTGKHGHAKVH+VGLDIF  KKYEDICPSTHNMDVPNV RKDYQL+ + DD +LSLMDD G+TRDDL+ P+ DIG EIR+AI D +DILCTVL A GEE V+ATK NTAVDK
Sbjct:    1 MADEGFDFEGGDAGASATFPMQCSALRKNGFVMIKNRPCKIVEMSTSKTGKHGHAKVHLVGLDIFTGKKYEDICPSTHNMDVPNVKRKDYQLIGLEDD-FLSLMDDSGDTRDDLKCPEGDIGDEIRAAIGDEKDILCTVLSAIGEECVIATKVNTAVDK 158
[Close]
BLAST of eukaryotic translation initiation factor 5a vs. nr
Match: gi|1148368817|gb|AQS22651.1| (eukaryotic translation initiation factor 5a [Pseudodiaptomus poplesia])

HSP 1 Score: 254.603 bits (649), Expect = 1.328e-84
Identity = 124/159 (77.99%), Postives = 139/159 (87.42%), Query Frame = 0 
Query:    1 MADD-YDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            MAD+ +DF  GDAG+S+TFPMQCSALRKNG VMIKNRPCKIVEMSTSKTGKHGHAKVH+VGLDIF  KKYEDICPSTH+MDVPNV RKDYQL+ + DD +LSLMDD G+TRDDL+ P+ DIG EIR+AI D +DILCTVL A GEE V+ATK NTAVDK
Sbjct:    1 MADEGFDFEGGDAGASATFPMQCSALRKNGFVMIKNRPCKIVEMSTSKTGKHGHAKVHLVGLDIFTGKKYEDICPSTHDMDVPNVKRKDYQLIGLEDD-FLSLMDDSGDTRDDLKCPEGDIGDEIRAAIGDEKDILCTVLSAIGEECVIATKVNTAVDK 158
[Close]
BLAST of eukaryotic translation initiation factor 5a vs. nr
Match: gi|1285024225|ref|XP_023024386.1| (eukaryotic translation initiation factor 5A isoform X2 [Leptinotarsa decemlineata] >gi|1285024227|ref|XP_023024387.1| eukaryotic translation initiation factor 5A isoform X2 [Leptinotarsa decemlineata])

HSP 1 Score: 250.366 bits (638), Expect = 5.236e-83
Identity = 113/156 (72.44%), Postives = 136/156 (87.18%), Query Frame = 0 
Query:    3 DDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            DD  F TGD+G+S+TFPMQCSALRKNG VM+K+RPCKIVEMSTSKTGKHGHAKVH+VG+DIF+ KKYEDICPSTHNMDVP+V R+DYQL D+SDD YLSLM D G  R+DL+VPD ++G ++R+  + G+DILCTVL +CGEE V+A KTNTA+DK
Sbjct:    5 DDTHFETGDSGASATFPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHLVGIDIFSGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLSLMSDNGELREDLKVPDGEVGAQLRNEYDAGKDILCTVLKSCGEEVVIAVKTNTALDK 160
[Close]
BLAST of eukaryotic translation initiation factor 5a vs. nr
Match: gi|1130232591|ref|XP_019761059.1| (PREDICTED: eukaryotic translation initiation factor 5A [Dendroctonus ponderosae] >gi|1130232594|ref|XP_019761060.1| PREDICTED: eukaryotic translation initiation factor 5A [Dendroctonus ponderosae] >gi|1130232598|ref|XP_019761061.1| PREDICTED: eukaryotic translation initiation factor 5A [Dendroctonus ponderosae] >gi|478256353|gb|ENN76543.1| hypothetical protein YQE_06994, partial [Dendroctonus ponderosae] >gi|546680782|gb|ERL90988.1| hypothetical protein D910_08330 [Dendroctonus ponderosae])

HSP 1 Score: 249.595 bits (636), Expect = 1.287e-82
Identity = 114/160 (71.25%), Postives = 139/160 (86.88%), Query Frame = 0 
Query:    1 MAD--DYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            MAD  D  F TGD+G+S+T+PMQCSALRKNG VM+K+RPCKIVEMSTSKTGKHGHAKVH+VG+DIF+ KKYEDICPSTHNMDVP+V R+DYQL D+SDD YLSLM D G+ R+DL++PD ++G ++RS  + G+DILCTVL +CGEE V+A KTNTA+DK
Sbjct:    1 MADIEDTHFETGDSGASATYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHLVGIDIFSGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLSLMSDNGDLREDLKIPDGEVGAQLRSEYDAGKDILCTVLKSCGEEVVIAVKTNTALDK 160
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BLAST of eukaryotic translation initiation factor 5a vs. nr
Match: gi|1048006643|ref|XP_017460893.1| (PREDICTED: eukaryotic translation initiation factor 5A [Rhagoletis zephyria])

HSP 1 Score: 249.595 bits (636), Expect = 1.374e-82
Identity = 112/156 (71.79%), Postives = 136/156 (87.18%), Query Frame = 0 
Query:    3 DDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            DD+ F TGD+G+S T+PMQCSALRKNG VM+K RPCKIVEMSTSKTGKHGHAKVHMVG+DIF+NKKYEDICPSTHNMDVP+V R+DYQL D+SDD +L+LM D G  R+DL+VP+ D+G  +RS  ++G+D+LCTVL +CGEE V+A KTNTA+DK
Sbjct:    5 DDHHFETGDSGASQTYPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPHVKREDYQLTDISDDGFLTLMSDNGEIREDLKVPEGDLGNSLRSDFDNGKDLLCTVLKSCGEECVIALKTNTALDK 160
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BLAST of eukaryotic translation initiation factor 5a vs. nr
Match: gi|952521461|gb|KRT81594.1| (hypothetical protein AMK59_6099 [Oryctes borbonicus])

HSP 1 Score: 249.21 bits (635), Expect = 1.484e-82
Identity = 114/160 (71.25%), Postives = 137/160 (85.62%), Query Frame = 0 
Query:    1 MAD--DYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            MAD  D  F TGD+G+S+TFPMQCSALRKNG VM+K+RPCKIVEMSTSKTGKHGHAKVH+VG+DIF  KKYEDICPSTHNMDVP+V R+DYQL D+SDD YL LM D G+ R+DL++P+ D+G ++R+  E G+DILCTVL +CGEE V+A KTNTA+DK
Sbjct:    1 MADIEDTHFETGDSGASATFPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLCLMADNGDLREDLKIPEGDVGVQLRAEFEAGKDILCTVLKSCGEEVVIAVKTNTALDK 160
[Close]
BLAST of eukaryotic translation initiation factor 5a vs. nr
Match: gi|91088683|ref|XP_974942.1| (PREDICTED: eukaryotic translation initiation factor 5A [Tribolium castaneum])

HSP 1 Score: 249.21 bits (635), Expect = 1.484e-82
Identity = 112/156 (71.79%), Postives = 136/156 (87.18%), Query Frame = 0 
Query:    3 DDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGKHGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYLSLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVATKTNTAVDK 158
            DD  F TGD+G+S+T+PMQCSALRKNG VM+K+RPCKIVEMSTSKTGKHGHAKVH+VG+DIF  KKYEDICPSTHNMDVP+V R+DYQL D+SDD YLSLM D G+ R+DL+VP+ D+G ++R+  + G+DILCTVL +CGEE V+A KTNTA+DK
Sbjct:    5 DDTHFETGDSGASATYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLSLMSDNGDLREDLKVPEGDVGAQLRAEYDAGKDILCTVLKSCGEEVVIAVKTNTALDK 160
The following BLAST results are available for this feature:
BLAST of eukaryotic translation initiation factor 5a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000008974.004e-9480.38supercontig:LSalAtl2s:LSalAtl2s1157:162526:164042:... [more]
EMLSAG000000110495.105e-9177.85supercontig:LSalAtl2s:LSalAtl2s744:105861:106334:-... [more]
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BLAST of eukaryotic translation initiation factor 5a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|51702278|sp|P62924.1|IF5A_SPOEX7.181e-8571.25RecName: Full=Eukaryotic translation initiation fa... [more]
gi|25090601|sp|Q9GU68.2|IF5A_DROME1.430e-8169.03RecName: Full=Eukaryotic translation initiation fa... [more]
gi|124231|sp|P10160.2|IF5A1_RABIT7.110e-7668.42RecName: Full=Eukaryotic translation initiation fa... [more]
gi|54035971|sp|Q6EWQ7.3|IF5A1_BOVIN4.734e-7568.42RecName: Full=Eukaryotic translation initiation fa... [more]
gi|190359775|sp|Q6IS14.2|IF5AL_HUMAN3.466e-7266.45RecName: Full=Eukaryotic translation initiation fa... [more]
gi|585302|sp|Q07460.3|IF5A2_CHICK2.809e-7164.90RecName: Full=Eukaryotic translation initiation fa... [more]
gi|74762725|sp|Q9GZV4.3|IF5A2_HUMAN3.980e-7064.24RecName: Full=Eukaryotic translation initiation fa... [more]
gi|1160421818|sp|O94083.2|IF5A_CANAL4.901e-7061.74RecName: Full=Eukaryotic translation initiation fa... [more]
gi|395398443|sp|Q9UST4.2|IF5A2_SCHPO4.159e-6763.70RecName: Full=Eukaryotic translation initiation fa... [more]
gi|3024014|sp|P56289.1|IF5A1_SCHPO5.023e-6763.70RecName: Full=Eukaryotic translation initiation fa... [more]

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BLAST of eukaryotic translation initiation factor 5a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225713344|gb|ACO12518.1|6.484e-9179.75Eukaryotic translation initiation factor 5A [Lepeo... [more]
gi|225708862|gb|ACO10277.1|4.518e-9080.38Eukaryotic translation initiation factor 5A [Calig... [more]
gi|225717586|gb|ACO14639.1|6.930e-9081.65Eukaryotic translation initiation factor 5A [Calig... [more]
gi|961375820|gb|ALS04654.1|1.992e-8578.62eukaryotic translation initiation factor 5A [Pseud... [more]
gi|1148368817|gb|AQS22651.1|1.328e-8477.99eukaryotic translation initiation factor 5a [Pseud... [more]
gi|1285024225|ref|XP_023024386.1|5.236e-8372.44eukaryotic translation initiation factor 5A isofor... [more]
gi|1130232591|ref|XP_019761059.1|1.287e-8271.25PREDICTED: eukaryotic translation initiation facto... [more]
gi|1048006643|ref|XP_017460893.1|1.374e-8271.79PREDICTED: eukaryotic translation initiation facto... [more]
gi|952521461|gb|KRT81594.1|1.484e-8271.25hypothetical protein AMK59_6099 [Oryctes borbonicu... [more]
gi|91088683|ref|XP_974942.1|1.484e-8271.79PREDICTED: eukaryotic translation initiation facto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold627_size122700supercontigscaffold627_size122700:27640..28756 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:translation initiation factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold627_size122700:27640..28756-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold627_size122700-processed-gene-0.15 ID=snap_masked-scaffold627_size122700-processed-gene-0.15|Name=eukaryotic translation initiation factor 5a|organism=Tigriopus kingsejongensis|type=gene|length=1117bp|location=Sequence derived from alignment at scaffold627_size122700:27640..28756- (Tigriopus kingsejongensis)
CTTGAGGCCGGCCCAATCGCTGGCGAGACTCTTTCTTTGGCCCCATCGAA
CGACACGCGTCTGCACGTTGTTGGGAATTCGGCCTGAACTCAAACTCGCC
CCAATCGTCGTTGGAGATCGGTAAGTAGGCGGGGTAGGGGCGGAGAGAGG
GCGTGAGCTGACACGCGGGTCCGGACTTGCGTTTCTAGCTAAACATGGCC
GACGATTATGATTTCTCGACGGGCGATGCCGGGTCTTCGTCCACCTTCCC
CATGCAATGCTCGGCTCTGCGCAAGAACGGCCACGTGATGATCAAGAATC
GTCCGTGCAAGATCGTGGAGATGTCCACCTCCAAGACCGGCAAGCACGGA
CACGCCAAAGTGCACATGGTGGGTCTGGACATTTTCAACAACAAGAAATA
CGAGGACATCTGTCCGTCCACCCACAACATGGACGTGCCCAACGTGACAC
GCAAGGACTACCAGGTGAGCCCGAGCCCGCCGCCGCGCGCTCCGGGTCCG
ATTAGCCGTTAGCCCCATGCTCACCCCCCACCTCTCTCCGGCAGTTGTTG
GACGTGTCGGACGACAACTATCTGTCCTTGATGGACGACGGCGGCAACAC
GCGCGACGACCTCAGAGTGCCCGACAGCGACATTGGCACCGAGATTCGAT
CGGCCATCGAGGACGGCCGAGACATCTTGGTAAGTAGCGGGGAGTAGCTT
GGCGTAGCTTGGCGTAGCTTGGCGTCCGCTCGACCTCGGAGAGGCTCACG
GGGATCAAAAGAGGGACTCACGGCGCCCTTTCCTTCGACAGTGTACCGTC
TTGATGGCTTGCGGCGAAGAAGCCGTGGTGGCCACCAAGACCAATACGGC
CGTGGACAAGTAAGCCGGGGTGCACCCCGGTCCGGCGGATGACCGGCCGC
GCCCGGTCGGACGTCCGCCTAATCATCTTGAGCGCGAGGGCCGCTCTTCC
GCGCCAGGTCACCCTCCATCCGTATCATCGCCCCCTGCCAATCGTGGGAC
GACACCGGCTCCCGCTTCCCGCTCGATGTGTTCCCCCGCGTTCGCGCCGT
GGACTCTGAAATGTTTTTCTGCGCCCCAATGGCGGCTTAAAAATATAGAT
ATTTTCTAAACTCCCAA
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Synonyms
The feature 'eukaryotic translation initiation factor 5a' has the following synonyms
Synonym
Tk10656
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