ras-related protein rab-28, snap_masked-scaffold888_size84757-processed-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Match: EMLSAG00000002875 (supercontig:LSalAtl2s:LSalAtl2s1664:20786:22838:1 gene:EMLSAG00000002875 transcript:EMLSAT00000002875 description:"maker-LSalAtl2s1664-augustus-gene-0.7") HSP 1 Score: 143.28 bits (360), Expect = 8.235e-44 Identity = 64/119 (53.78%), Postives = 87/119 (73.11%), Query Frame = 0 Query: 30 MSDSEE-EVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKK 147 MSDSEE E E+QYK+++IGDP GK++L SK+ D FSKQY PT GVEFYLKR ++ G + + LKLWDI G +L G M+D YI+ ANA++ +YDV+N S NL++W+ C + L K+ Sbjct: 1 MSDSEEDEKAEKQYKIIIIGDPETGKSSLVSKYTKDKFSKQYKPTTGVEFYLKRTIVTGGKYITLKLWDIEGTALKGKMLDNYIYGANALIFLYDVTNAESINNLEKWVSACRKKLTKE 119
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Match: EMLSAG00000001458 (supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:1 gene:EMLSAG00000001458 transcript:EMLSAT00000001458 description:"maker-LSalAtl2s1248-augustus-gene-0.13") HSP 1 Score: 85.1149 bits (209), Expect = 1.891e-21 Identity = 45/131 (34.35%), Postives = 76/131 (58.02%), Query Frame = 0 Query: 42 YKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNR---------ALAKKEQGSARLVVDYVHQDE 163 +KL+LIGD VGK+ L +FA DT+++ Y T+GV+F ++ + L G + + L++WD G ++ Y A+ I++VYDV++ +SF NL +WL++ +R + K + + VVDY E Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDYTTAKE 138
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Match: EMLSAG00000002040 (supercontig:LSalAtl2s:LSalAtl2s136:216604:221557:1 gene:EMLSAG00000002040 transcript:EMLSAT00000002040 description:"maker-LSalAtl2s136-augustus-gene-2.7") HSP 1 Score: 81.2629 bits (199), Expect = 8.487e-20 Identity = 39/116 (33.62%), Postives = 67/116 (57.76%), Query Frame = 0 Query: 41 QYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKKEQGSARLVV 156 ++KLV +G+ VGKT+L ++F +D+F Y T+G++F L + M +R V L+LWD G S++ YI + ++VYD +N NSF +W+ + E+GS +++ Sbjct: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDF-LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTSKWIDDV-----RTERGSDVIIM 122
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Match: EMLSAG00000003241 (supercontig:LSalAtl2s:LSalAtl2s178:231454:232215:-1 gene:EMLSAG00000003241 transcript:EMLSAT00000003241 description:"augustus_masked-LSalAtl2s178-processed-gene-2.6") HSP 1 Score: 77.411 bits (189), Expect = 1.669e-18 Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0 Query: 43 KLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCN 141 KL++IG+ VGK++L +F D F ++ T+GV+F +K L + GNR V L +WD G ++ Y +LVYDV+N +SF N++ WL + + Sbjct: 11 KLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNR-VKLAIWDTAGQERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVENWLNELD 108
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Match: EMLSAG00000009511 (supercontig:LSalAtl2s:LSalAtl2s612:149458:156023:-1 gene:EMLSAG00000009511 transcript:EMLSAT00000009511 description:"maker-LSalAtl2s612-snap-gene-1.42") HSP 1 Score: 77.0258 bits (188), Expect = 1.921e-17 Identity = 34/98 (34.69%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 42 YKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQ 139 +KL+LIGD VGKT + +F+ D F+ + T+G++F ++ + L G + + L++WD G ++ Y A I+LVYD++N SF+N+ W++ Sbjct: 50 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDG-KKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRN 146
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Match: EMLSAG00000001628 (supercontig:LSalAtl2s:LSalAtl2s128:1093888:1095612:1 gene:EMLSAG00000001628 transcript:EMLSAT00000001628 description:"augustus_masked-LSalAtl2s128-processed-gene-11.3") HSP 1 Score: 73.1738 bits (178), Expect = 2.539e-17 Identity = 36/107 (33.64%), Postives = 61/107 (57.01%), Query Frame = 0 Query: 41 QYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKK 147 +K+VL+G+ CVGKT+ ++ D F++++ T+ F KRL + G R V L +WD G ++ Y AN +LVYD+++ +SF + W+K+ + L K Sbjct: 13 NFKIVLLGEGCVGKTSCVLRYVDDQFNERHITTLQASFLNKRLNVRGKR-VNLSIWDTAGQERFHALGPIYYRDANGAILVYDITDLDSFRKVKVWIKELRKMLGNK 118
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Match: EMLSAG00000006497 (supercontig:LSalAtl2s:LSalAtl2s356:427912:429520:-1 gene:EMLSAG00000006497 transcript:EMLSAT00000006497 description:"maker-LSalAtl2s356-snap-gene-4.11") HSP 1 Score: 73.9442 bits (180), Expect = 5.516e-17 Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = 0 Query: 34 EEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGAS-LDGSMMDKYIFRANAILLVYDVSNFNSFE-NLDEWLKQC 140 ++++ +K++++GD VGKT L +F +F + T+GV+F K L + G + L+LWD G SM+ Y ANA++ VYD++ NSF LD+W+ +C Sbjct: 7 DQKLKRRTFKVIVLGDAGVGKTCLTFRFCSGSFPDGVDSTIGVDFREKNLTVDG-EDIRLQLWDTAGQERFRRSMISHYYRNANAVVFVYDINCKNSFTPGLDKWIAEC 114
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Match: EMLSAG00000000624 (supercontig:LSalAtl2s:LSalAtl2s109:73593:97815:1 gene:EMLSAG00000000624 transcript:EMLSAT00000000624 description:"maker-LSalAtl2s109-augustus-gene-1.21") HSP 1 Score: 75.8702 bits (185), Expect = 6.760e-17 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 0 Query: 39 EEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRAL 144 E Q++L+LIGD VGK++L F +F + +PTVG++F+ K L + + L LWD G S+ Y A LL+YDV N +SF ++ W+ + + + Sbjct: 1462 EYQFRLILIGDSTVGKSSLLKYFTDGSFGEVSDPTVGIDFFAKLLPVKDGNVMKLLLWDTAGQERFRSITRSYYRNTVAALLIYDVCNRDSFTHIPNWMHEAGKHM 1567
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Match: EMLSAG00000007135 (supercontig:LSalAtl2s:LSalAtl2s402:312272:313969:1 gene:EMLSAG00000007135 transcript:EMLSAT00000007135 description:"maker-LSalAtl2s402-augustus-gene-3.24") HSP 1 Score: 73.9442 bits (180), Expect = 1.554e-16 Identity = 35/104 (33.65%), Postives = 58/104 (55.77%), Query Frame = 0 Query: 42 YKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALA 145 YK+++IG+ GK+A +F D+F + Y TVGV+F+LK L + V L+LWDI G M Y + +++YD N N+F ++ +W ++ + A Sbjct: 18 YKIIVIGEVNSGKSAFIRRFIDDSFCEXYYATVGVDFHLKVLQFKKDLEVRLQLWDIAGQERFSKMTRAYFKGSVGAIVLYDSGNVNTFNSVKKWKEELDEKCA 121
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Match: EMLSAG00000003190 (supercontig:LSalAtl2s:LSalAtl2s1770:8657:11199:-1 gene:EMLSAG00000003190 transcript:EMLSAT00000003190 description:"augustus_masked-LSalAtl2s1770-processed-gene-0.0") HSP 1 Score: 70.4774 bits (171), Expect = 8.255e-16 Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 0 Query: 32 DSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQ 139 D+ ++ + +KL++IG+ VGKT+ ++A D+F+ + TVG++F +K + R V L++WD G ++ Y A +L+YDV+N +SF ++ +W Q Sbjct: 12 DAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKR-VKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNHVHDWCTQ 118
BLAST of ras-related protein rab-28 vs. SwissProt
Match: gi|46577110|sp|Q99KL7.1|RAB28_MOUSE (RecName: Full=Ras-related protein Rab-28; Flags: Precursor) HSP 1 Score: 141.354 bits (355), Expect = 1.677e-41 Identity = 60/107 (56.07%), Postives = 84/107 (78.50%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEW 136 MSDSEEE + Q K+V++GD GKT+LA+ FA +TF KQY T+G++F+L+R+ LPGN V L++WDIGG ++ G M+DKYI+ A ILLVYD++N+ SFENL++W Sbjct: 1 MSDSEEESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDW 107
BLAST of ras-related protein rab-28 vs. SwissProt
Match: gi|1710025|sp|P51158.1|RAB28_RAT (RecName: Full=Ras-related protein Rab-28; Flags: Precursor) HSP 1 Score: 140.969 bits (354), Expect = 2.038e-41 Identity = 60/107 (56.07%), Postives = 84/107 (78.50%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEW 136 MSDSEEE + Q K+V++GD GKT+LA+ FA +TF KQY T+G++F+L+R+ LPGN V L++WDIGG ++ G M+DKYI+ A ILLVYD++N+ SFENL++W Sbjct: 1 MSDSEEESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDW 107
BLAST of ras-related protein rab-28 vs. SwissProt
Match: gi|85700393|sp|P51157.2|RAB28_HUMAN (RecName: Full=Ras-related protein Rab-28; Flags: Precursor) HSP 1 Score: 139.428 bits (350), Expect = 8.612e-41 Identity = 58/107 (54.21%), Postives = 83/107 (77.57%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEW 136 MSDSEEE + Q K+V++GD GKT+L + FA +TF KQY T+G++F+L+R+ LPGN V L++WDIGG ++ G M+DKYI+ A +LLVYD++N+ SFENL++W Sbjct: 1 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDW 107
BLAST of ras-related protein rab-28 vs. SwissProt
Match: gi|75055283|sp|Q5RFI2.1|RAB28_PONAB (RecName: Full=Ras-related protein Rab-28; Flags: Precursor) HSP 1 Score: 139.043 bits (349), Expect = 1.218e-40 Identity = 58/107 (54.21%), Postives = 84/107 (78.50%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEW 136 MSDSEEE + Q K+V++GD GKT+LA+ FA +TF K+Y T+G++F+L+R+ LPGN V L++WDIGG ++ G M+DKYI+ A +LLVYD++N+ SFENL++W Sbjct: 1 MSDSEEESQDRQLKIVVLGDGASGKTSLATCFAQETFGKRYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDW 107
BLAST of ras-related protein rab-28 vs. SwissProt
Match: gi|118573263|sp|Q3SWY9.1|RAB28_BOVIN (RecName: Full=Ras-related protein Rab-28; Flags: Precursor) HSP 1 Score: 138.658 bits (348), Expect = 1.799e-40 Identity = 59/107 (55.14%), Postives = 84/107 (78.50%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEW 136 MSDSEEE + Q K+V++GD GKT+LA+ FA +TF KQY T+G++F+L+R+ LPG+ V L++WDIGG ++ G M+DKYI+ A +LLVYDV+N+ SFENL++W Sbjct: 1 MSDSEEESLDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGSLNVTLQVWDIGGQTIGGKMLDKYIYGAQGVLLVYDVTNYQSFENLEDW 107
BLAST of ras-related protein rab-28 vs. SwissProt
Match: gi|75029072|sp|Q9XWR6.1|RAB28_CAEEL (RecName: Full=Ras-related protein Rab-28) HSP 1 Score: 105.916 bits (263), Expect = 1.527e-27 Identity = 45/106 (42.45%), Postives = 70/106 (66.04%), Query Frame = 0 Query: 43 KLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKKE 148 K+V++GD GKT++ +FA ++F K Y+ T+G++F+ +R+ LP V +++WDIGG S+ G M+DKY+ AN + LVYDV+N SFEN +WL + E Sbjct: 37 KIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQSIAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSE 142
BLAST of ras-related protein rab-28 vs. SwissProt
Match: gi|75337423|sp|Q9SMR4.1|RAH1C_ARATH (RecName: Full=Ras-related protein RABH1c; Short=AtRABH1c) HSP 1 Score: 88.1965 bits (217), Expect = 5.864e-21 Identity = 41/116 (35.34%), Postives = 71/116 (61.21%), Query Frame = 0 Query: 41 QYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKKEQGSARLVV 156 ++KLV +GD VGKT++ ++F +D F Y PT+G++F L + M +R V L+LWD G S++ YI ++ ++VYDVSN +F N +W++ +R E+G + +++ Sbjct: 9 KFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDF-LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHR-----ERGQSNVII 118
BLAST of ras-related protein rab-28 vs. SwissProt
Match: gi|141302|sp|P11620.2|YPT1_SCHPO (RecName: Full=GTP-binding protein ypt1) HSP 1 Score: 85.8853 bits (211), Expect = 3.186e-20 Identity = 43/115 (37.39%), Postives = 72/115 (62.61%), Query Frame = 0 Query: 42 YKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKKEQGSARLVV 156 +KL+LIGD VGK+ L +FA DT+++ Y T+GV+F ++ L G + V L++WD G ++ Y A+ I++VYDV++ +SF N+ +WL++ +R +G RL+V Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEG-KTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAV---EGVNRLLV 119
BLAST of ras-related protein rab-28 vs. SwissProt
Match: gi|134131|sp|P17608.1|RYH1_SCHPO (RecName: Full=GTP-binding protein ryh1) HSP 1 Score: 85.5001 bits (210), Expect = 4.925e-20 Identity = 40/116 (34.48%), Postives = 70/116 (60.34%), Query Frame = 0 Query: 41 QYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKKEQGSARLVV 156 ++KLV +G+ VGKT+L ++F +D F Y T+G++F L + M +R V L+LWD G S++ YI ++ ++VYD++N NSF N ++W++ + E+G ++V Sbjct: 11 KFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDF-LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDV-----RAERGDDVIIV 120
BLAST of ras-related protein rab-28 vs. SwissProt
Match: gi|81910561|sp|Q63481.1|RAB7L_RAT (RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like protein 1; AltName: Full=Ras-related protein Rab-29) HSP 1 Score: 84.7297 bits (208), Expect = 8.014e-20 Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 0 Query: 42 YKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALA 145 +K++++GD VGKT+L +++ D+FSK Y TVGV+F LK L + V L+LWDI G SM Y A+A ++++DV+N +F N W + + L Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLT 111
BLAST of ras-related protein rab-28 vs. nr
Match: gi|1325330042|ref|XP_023346886.1| (ras-related protein Rab-28-like [Eurytemora affinis]) HSP 1 Score: 155.992 bits (393), Expect = 1.032e-44 Identity = 68/120 (56.67%), Postives = 95/120 (79.17%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKKEQ 149 MSDSE+E +E+Q+KLVL+G+P GKT++ ++ FSKQY+PT GV+FYLKR LPG++ +ALKLWD+ SL G M+DKY+F A+AI+LVYDV++ +SFENL EWL+Q + LA +E+ Sbjct: 1 MSDSEDEGSEKQFKLVLLGEPQTGKTSICQRYTSSQFSKQYHPTTGVDFYLKRTKLPGSKNIALKLWDVSSTSLSGRMLDKYVFGADAIMLVYDVTSASSFENLKEWLEQSKKILAGQEK 120
BLAST of ras-related protein rab-28 vs. nr
Match: gi|1020568893|ref|XP_016113251.1| (PREDICTED: ras-related protein Rab-28-like [Sinocyclocheilus grahami]) HSP 1 Score: 147.132 bits (370), Expect = 2.722e-42 Identity = 65/130 (50.00%), Postives = 91/130 (70.00%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKKEQGSARLVVDYV 159 MSDSEEE E Q KLVL+GD GKT+LA +FA + F KQY T+G++F+LKR+ LPGN V L++WDIGG ++ G M+DKY++ A +LLVYD++N SFENL++WL +A E+ +L + + Sbjct: 1 MSDSEEEAQERQLKLVLLGDGASGKTSLAIRFAQEAFGKQYKQTIGLDFFLKRITLPGNLNVTLQVWDIGGQTIGGKMLDKYVYGAQGVLLVYDITNSQSFENLEDWLNMVRKA---NEESDTQLAISLI 127
BLAST of ras-related protein rab-28 vs. nr
Match: gi|1025268095|ref|XP_016373803.1| (PREDICTED: ras-related protein Rab-28-like isoform X3 [Sinocyclocheilus rhinocerous]) HSP 1 Score: 149.443 bits (376), Expect = 2.888e-42 Identity = 65/114 (57.02%), Postives = 87/114 (76.32%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRA 143 MSDSEEEV E Q K+VL+GD GKT+LA +FA + F KQY T+G++F+LKR+ LPGN V L++WDIGG ++ G M+DKYI+ A +LLVYD++N SFENL++WLK +A Sbjct: 1 MSDSEEEVQERQLKIVLLGDGASGKTSLAIRFAQEAFGKQYKQTIGLDFFLKRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNSQSFENLEDWLKMVRKA 114
BLAST of ras-related protein rab-28 vs. nr
Match: gi|1025268087|ref|XP_016373801.1| (PREDICTED: ras-related protein Rab-28-like isoform X1 [Sinocyclocheilus rhinocerous] >gi|1025268099|ref|XP_016373804.1| PREDICTED: ras-related protein Rab-28-like isoform X1 [Sinocyclocheilus rhinocerous]) HSP 1 Score: 149.443 bits (376), Expect = 3.747e-42 Identity = 65/114 (57.02%), Postives = 87/114 (76.32%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRA 143 MSDSEEEV E Q K+VL+GD GKT+LA +FA + F KQY T+G++F+LKR+ LPGN V L++WDIGG ++ G M+DKYI+ A +LLVYD++N SFENL++WLK +A Sbjct: 1 MSDSEEEVQERQLKIVLLGDGASGKTSLAIRFAQEAFGKQYKQTIGLDFFLKRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNSQSFENLEDWLKMVRKA 114
BLAST of ras-related protein rab-28 vs. nr
Match: gi|1025268091|ref|XP_016373802.1| (PREDICTED: ras-related protein Rab-28-like isoform X2 [Sinocyclocheilus rhinocerous]) HSP 1 Score: 149.443 bits (376), Expect = 3.830e-42 Identity = 65/114 (57.02%), Postives = 87/114 (76.32%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRA 143 MSDSEEEV E Q K+VL+GD GKT+LA +FA + F KQY T+G++F+LKR+ LPGN V L++WDIGG ++ G M+DKYI+ A +LLVYD++N SFENL++WLK +A Sbjct: 1 MSDSEEEVQERQLKIVLLGDGASGKTSLAIRFAQEAFGKQYKQTIGLDFFLKRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNSQSFENLEDWLKMVRKA 114
BLAST of ras-related protein rab-28 vs. nr
Match: gi|1121917200|ref|XP_019408816.1| (PREDICTED: ras-related protein Rab-28 isoform X3 [Crocodylus porosus]) HSP 1 Score: 148.288 bits (373), Expect = 8.133e-42 Identity = 66/107 (61.68%), Postives = 84/107 (78.50%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEW 136 MSDSEEE E Q KLVL+GD GKT+LA++FA + F KQY TVG++F+LKR+ LPGN V L+LWDIGG +L G M+DKYI+ A ILLVYD++N+ SFENL++W Sbjct: 1 MSDSEEESPERQLKLVLLGDGTSGKTSLATRFAQEAFGKQYKQTVGLDFFLKRITLPGNVNVTLQLWDIGGQTLGGKMLDKYIYGAQGILLVYDITNYQSFENLEDW 107
BLAST of ras-related protein rab-28 vs. nr
Match: gi|1121917193|ref|XP_019408814.1| (PREDICTED: ras-related protein Rab-28 isoform X1 [Crocodylus porosus]) HSP 1 Score: 147.902 bits (372), Expect = 1.363e-41 Identity = 66/107 (61.68%), Postives = 84/107 (78.50%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEW 136 MSDSEEE E Q KLVL+GD GKT+LA++FA + F KQY TVG++F+LKR+ LPGN V L+LWDIGG +L G M+DKYI+ A ILLVYD++N+ SFENL++W Sbjct: 1 MSDSEEESPERQLKLVLLGDGTSGKTSLATRFAQEAFGKQYKQTVGLDFFLKRITLPGNVNVTLQLWDIGGQTLGGKMLDKYIYGAQGILLVYDITNYQSFENLEDW 107
BLAST of ras-related protein rab-28 vs. nr
Match: gi|1025294537|ref|XP_016379508.1| (PREDICTED: ras-related protein Rab-28-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 147.517 bits (371), Expect = 1.694e-41 Identity = 65/130 (50.00%), Postives = 92/130 (70.77%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKKEQGSARLVVDYV 159 MSDSEEE+ E Q K+VL+GD GKT+LA +FA + F KQY T+G++F+LKR+ LPGN V L++WDIGG ++ G M+DKYI+ A +LLVYD++N SFENL++WL +A E+ +L + + Sbjct: 1 MSDSEEEIQERQLKIVLLGDGASGKTSLAIRFAQEAFGKQYKQTIGLDFFLKRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNSQSFENLEDWLNMVRKA---NEESDTQLAISLI 127
BLAST of ras-related protein rab-28 vs. nr
Match: gi|465996047|gb|EMP39939.1| (Ras-related protein Rab-28 [Chelonia mydas]) HSP 1 Score: 144.436 bits (363), Expect = 2.235e-41 Identity = 64/119 (53.78%), Postives = 88/119 (73.95%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEWLKQCNRALAKKE 148 MSDSEEE + Q KLV++GD GKT+LA++FA + F KQY TVG++F+LKR+ LPGN V L++WDIGG ++ G M+DKYI+ A ILLVYD++N+ SFENL++W +A + E Sbjct: 1 MSDSEEESPDRQLKLVVLGDGTSGKTSLATRFAQEAFGKQYRQTVGLDFFLKRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYNMVKKANEESE 119
BLAST of ras-related protein rab-28 vs. nr
Match: gi|1113736676|ref|XP_019335285.1| (PREDICTED: ras-related protein Rab-28 isoform X2 [Alligator mississippiensis]) HSP 1 Score: 147.132 bits (370), Expect = 2.570e-41 Identity = 65/107 (60.75%), Postives = 84/107 (78.50%), Query Frame = 0 Query: 30 MSDSEEEVTEEQYKLVLIGDPCVGKTALASKFAHDTFSKQYNPTVGVEFYLKRLMLPGNRPVALKLWDIGGASLDGSMMDKYIFRANAILLVYDVSNFNSFENLDEW 136 MSDSEEE E Q KLVL+GD GKT+LA++FA + F KQY TVG++F+LKR+ LPGN V L+LWDIGG ++ G M+DKYI+ A ILLVYD++N+ SFENL++W Sbjct: 1 MSDSEEESPERQLKLVLLGDGTSGKTSLATRFAQEAFGKQYKQTVGLDFFLKRITLPGNVNVTLQLWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDW 107 The following BLAST results are available for this feature:
BLAST of ras-related protein rab-28 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of ras-related protein rab-28 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of ras-related protein rab-28 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold888_size84757:76356..83297- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold888_size84757-processed-gene-0.17 ID=snap_masked-scaffold888_size84757-processed-gene-0.17|Name=ras-related protein rab-28|organism=Tigriopus kingsejongensis|type=gene|length=6942bp|location=Sequence derived from alignment at scaffold888_size84757:76356..83297- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'ras-related protein rab-28' has the following synonyms
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