ap-2 complex subunit sigma isoform x1, maker-scaffold1159_size58420-snap-gene-0.14 (gene) Tigriopus kingsejongensis

Overview
Nameap-2 complex subunit sigma isoform x1
Unique Namemaker-scaffold1159_size58420-snap-gene-0.14
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of ap-2 complex subunit sigma isoform x1 vs. L. salmonis genes
Match: EMLSAG00000006382 (supercontig:LSalAtl2s:LSalAtl2s34:495818:496246:-1 gene:EMLSAG00000006382 transcript:EMLSAT00000006382 description:"augustus_masked-LSalAtl2s34-processed-gene-5.1")

HSP 1 Score: 266.159 bits (679), Expect = 1.174e-93
Identity = 126/141 (89.36%), Postives = 137/141 (97.16%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            IKF++IQNRAGKTRLAKWY +F+ +EKQKLIEEVHA VTVRDAKHTNFVEFR+YKI+YRRYAGLYFCICVDV+DNNL+YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQL MLNSLE
Sbjct:    2 IKFVMIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHACVTVRDAKHTNFVEFRHYKIVYRRYAGLYFCICVDVNDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLTMLNSLE 142
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BLAST of ap-2 complex subunit sigma isoform x1 vs. L. salmonis genes
Match: EMLSAG00000001508 (supercontig:LSalAtl2s:LSalAtl2s125:280180:281536:1 gene:EMLSAG00000001508 transcript:EMLSAT00000001508 description:"maker-LSalAtl2s125-augustus-gene-2.13")

HSP 1 Score: 140.969 bits (354), Expect = 5.497e-44
Identity = 63/134 (47.01%), Postives = 98/134 (73.13%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQL 143
            I FIL+ +R GK RL KW+ +   +EK+K+  E+ +++  R  K +NF+E+ +  I+Y+RYA L+FC  +D +DN L  LE IH +VEVL++YF +VCELD++FNF + Y I+DE+ LAG+++ETS+  +LKQ+
Sbjct:    2 IHFILLFSRQGKIRLQKWFEARTDKEKKKITRELTSIIIARKPKMSNFLEWHDKVIVYKRYASLFFCFAIDRNDNELLTLEIIHRYVEVLDKYFGSVCELDIIFNFERAYFILDELILAGDVQETSKKAILKQI 135
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BLAST of ap-2 complex subunit sigma isoform x1 vs. L. salmonis genes
Match: EMLSAG00000007257 (supercontig:LSalAtl2s:LSalAtl2s408:42626:44752:1 gene:EMLSAG00000007257 transcript:EMLSAT00000007257 description:"maker-LSalAtl2s408-augustus-gene-0.13")

HSP 1 Score: 130.954 bits (328), Expect = 5.382e-40
Identity = 61/141 (43.26%), Postives = 99/141 (70.21%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            I+++L+ +R GK RL K++T+   + K+KL  E+   +  R  K ++F+E+++ KI+Y+RYA LYFC  ++  DN L  LE IH +VE+L++YF +VCELD++FNF K Y ++DE+ L GE++ETS+  VLK +   + L+
Sbjct:    2 IQYMLLFSRQGKLRLQKYFTAQSEKSKKKLSRELINNILSRKPKMSSFLEWKDLKIVYKRYASLYFCCAIEEEDNELVVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEIQETSKKNVLKAISAQDCLQ 142
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BLAST of ap-2 complex subunit sigma isoform x1 vs. L. salmonis genes
Match: EMLSAG00000009173 (supercontig:LSalAtl2s:LSalAtl2s57:41205:42872:1 gene:EMLSAG00000009173 transcript:EMLSAT00000009173 description:"maker-LSalAtl2s57-augustus-gene-0.2")

HSP 1 Score: 110.538 bits (275), Expect = 7.193e-32
Identity = 58/137 (42.34%), Postives = 91/137 (66.42%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAE---EKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDV--SDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLK 141
            I  + + +R GK RL K+Y +  A+   +K K+I+E+ + +  R A  + F+E+R++ I+Y+RYA LYF   VD    DN L  LE IH +VEVL++YF  VCELD+++NF K + ++DEM ++GE+ E S+  V+K
Sbjct:    2 IHLVTLFSRQGKVRLCKFYNANLAKSEKDKTKIIKEMISNILSRTASMSCFIEWRDHTIVYKRYASLYFLFVVDKYGVDNELIILELIHRYVEVLDQYFGAVCELDIIYNFEKAHFLLDEMIMSGEIMEPSRKAVVK 138
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BLAST of ap-2 complex subunit sigma isoform x1 vs. L. salmonis genes
Match: EMLSAG00000001262 (supercontig:LSalAtl2s:LSalAtl2s1206:25785:30904:1 gene:EMLSAG00000001262 transcript:EMLSAT00000001262 description:"maker-LSalAtl2s1206-augustus-gene-0.19")

HSP 1 Score: 108.227 bits (269), Expect = 1.010e-30
Identity = 59/147 (40.14%), Postives = 94/147 (63.95%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEF------RNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            I+ IL+ N  GK R+ K+Y  +   ++Q++I+E   LV+ RD    NF+E        ++K+IYR YA LYF  CVD S++ L  L+ I  FVE L++ F NVCELDL+F+  KV+ I++E+ + G + ET+ T++L+++   + LE
Sbjct:    2 IRAILVFNNRGKPRVNKFYEYYTETDQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDFKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHFILNELVMGGMVLETNMTEILQRIEEQSKLE 148
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Match: gi|51316970|sp|P62744.1|AP2S1_RAT (RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptor protein complex AP-2 subunit sigma; AltName: Full=Adaptor-related protein complex 2 subunit sigma; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Clathrin coat assembly protein AP17; AltName: Full=Clathrin coat-associated protein AP17; AltName: Full=Plasma membrane adaptor AP-2 17 kDa protein; AltName: Full=Sigma-adaptin 3b; AltName: Full=Sigma2-adaptin >gi|51316976|sp|P62743.1|AP2S1_MOUSE RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptor protein complex AP-2 subunit sigma; AltName: Full=Adaptor-related protein complex 2 subunit sigma; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Clathrin coat assembly protein AP17; AltName: Full=Clathrin coat-associated protein AP17; AltName: Full=Plasma membrane adaptor AP-2 17 kDa protein; AltName: Full=Sigma-adaptin 3b; AltName: Full=Sigma2-adaptin >gi|51338780|sp|P53680.2|AP2S1_HUMAN RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptor protein complex AP-2 subunit sigma; AltName: Full=Adaptor-related protein complex 2 subunit sigma; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Clathrin coat assembly protein AP17; AltName: Full=Clathrin coat-associated protein AP17; AltName: Full=HA2 17 kDa subunit; AltName: Full=Plasma membrane adaptor AP-2 17 kDa protein; AltName: Full=Sigma2-adaptin >gi|73622190|sp|Q5R940.1|AP2S1_PONAB RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptor protein complex AP-2 subunit sigma; AltName: Full=Adaptor-related protein complex 2 subunit sigma; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Clathrin coat assembly protein AP17; AltName: Full=Clathrin coat-associated protein AP17; AltName: Full=Plasma membrane adaptor AP-2 17 kDa protein; AltName: Full=Sigma-adaptin 3b; AltName: Full=Sigma2-adaptin >gi|122143669|sp|Q17QC5.1|AP2S1_BOVIN RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptor protein complex AP-2 subunit sigma; AltName: Full=Adaptor-related protein complex 2 subunit sigma; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Clathrin coat assembly protein AP17; AltName: Full=Clathrin coat-associated protein AP17; AltName: Full=Plasma membrane adaptor AP-2 17 kDa protein; AltName: Full=Sigma2-adaptin)

HSP 1 Score: 266.929 bits (681), Expect = 2.363e-92
Identity = 128/141 (90.78%), Postives = 136/141 (96.45%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            I+FILIQNRAGKTRLAKWY  F+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRN+KIIYRRYAGLYFCICVDV+DNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQLLML SLE
Sbjct:    2 IRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE 142
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Match: gi|74617209|sp|Q7SAQ1.1|AP2S_NEUCR (RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptin small chain; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Sigma2-adaptin)

HSP 1 Score: 192.586 bits (488), Expect = 5.914e-63
Identity = 95/142 (66.90%), Postives = 113/142 (79.58%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKH-TNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            + FILIQNR GKTRLAKWY  +  EEK KL  E+H LV  RD K+ +NFVEFRN+K++YRRYAGL+FC CVD +DN L YLEAIH FVEVL+ +F NVCELDLVFNFYKVY I+DE+FLAGE+ ETS+  VL +L  L+ LE
Sbjct:    2 LSFILIQNRQGKTRLAKWYVPYSDEEKIKLKGEIHRLVAPRDQKYQSNFVEFRNHKVVYRRYAGLFFCACVDTNDNELAYLEAIHFFVEVLDSFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLEHLDKLE 143
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Match: gi|85700951|sp|Q4ICG5.1|AP2S_GIBZE (RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptin small chain; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Sigma2-adaptin)

HSP 1 Score: 191.43 bits (485), Expect = 1.847e-62
Identity = 96/142 (67.61%), Postives = 112/142 (78.87%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKH-TNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            + FILIQNR GKTRLAKWY  F  E+K KL  EVH LV  RD K+ +NFVEFRN KI+YRRYAGL+FC CVD +DN L +LEAIH FVEVL+ +F NVCELDLVFNFYKVY I+DE+FLAGE+ ETS+  VL +L  L+ LE
Sbjct:    2 LSFILIQNRQGKTRLAKWYAPFSDEQKIKLKGEVHRLVAPRDQKYQSNFVEFRNNKIVYRRYAGLFFCACVDTNDNELAFLEAIHFFVEVLDAFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLEHLDKLE 143
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Match: gi|74672344|sp|Q4WS49.1|AP2S_ASPFU (RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptin small chain; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Sigma2-adaptin)

HSP 1 Score: 191.045 bits (484), Expect = 2.298e-62
Identity = 96/145 (66.21%), Postives = 115/145 (79.31%), Query Frame = 0 
Query:    8 MPIKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKH-TNFVEF-RNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            M + FIL+QNR GKTRLAKWY  +  EEK KL  EVH LV  RD K+ +NFVEF R+ KI+YRRYAGL+FC+CVD +DN L YLEAIH FVEVL+++F NVCELDLVFNFYKVY I+DE+FLAGE+ ETS+  VL +L  L+ LE
Sbjct:    1 MVLSFILVQNRQGKTRLAKWYAPYSDEEKVKLKGEVHRLVAPRDQKYQSNFVEFKRSTKIVYRRYAGLFFCVCVDATDNELAYLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLEHLDKLE 145
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Match: gi|182627624|sp|Q54H39.2|AP2S_DICDI (RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptin small chain; AltName: Full=Adaptor-related protein complex 2 subunit sigma; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Sigma2-adaptin)

HSP 1 Score: 190.66 bits (483), Expect = 2.742e-62
Identity = 91/140 (65.00%), Postives = 113/140 (80.71%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSL 149
            I FILIQNR GKTRL+KWYT +E  EK+KL  E+H +V  R+ K TNFVEFR ++I+YRRYAGL+F +CVD +DN LF LEAIH FVEVL+ YF NVCELDLVFNFYKVY I+DE+FLAGEL E S+  +L+++  L++L
Sbjct:    2 IHFILIQNRQGKTRLSKWYTPYEDVEKRKLSHEIHKIVNSRETKFTNFVEFRTHRIVYRRYAGLFFSVCVDPTDNELFCLEAIHLFVEVLDAYFGNVCELDLVFNFYKVYAIIDEVFLAGELMEPSKHVILQRMEFLDNL 141
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Match: gi|74598753|sp|Q5BFF8.1|AP2S_EMENI (RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptin small chain; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Sigma2-adaptin)

HSP 1 Score: 189.504 bits (480), Expect = 9.032e-62
Identity = 96/145 (66.21%), Postives = 114/145 (78.62%), Query Frame = 0 
Query:    8 MPIKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKH-TNFVEF-RNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            M + FIL+QNR GKTRLAKWY  +  EEK KL  EVH LV  RD K+ +NFVEF R+ KI+YRRYAGL+FC CVD +DN L YLEAIH FVEVL+++F NVCELDLVFNFYKVY I+DE+FLAGE+ ETS+  VL +L  L+ LE
Sbjct:    1 MVLSFILVQNRQGKTRLAKWYAPYSDEEKVKLKGEVHRLVAPRDQKYQSNFVEFKRSTKIVYRRYAGLFFCACVDATDNELAYLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLEHLDKLE 145
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Match: gi|75148767|sp|Q84WL9.1|AP2S_ARATH (RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptor AP-2 17 kDa protein; AltName: Full=Adaptor-related protein complex 2 subunit sigma; AltName: Full=Clathrin assembly protein 2 small chain; AltName: Full=Clathrin coat assembly protein AP17; AltName: Full=Clathrin coat-associated protein AP17; AltName: Full=Sigma2-adaptin)

HSP 1 Score: 184.496 bits (467), Expect = 7.548e-60
Identity = 88/141 (62.41%), Postives = 112/141 (79.43%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            I+FIL+QNR GKTRLAK+Y   E  EK K+  EVH LV  RDAK TNFVEFR +K+IYRRYAGL+F +CVD++DN L YLE+IH FVE+L+ +F NVCELDLVFNF+KVY I+DE  LAGEL+ETS+  +++++  L  L+
Sbjct:    2 IRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYRRYAGLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKRAIIERMSELEKLQ 142
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Match: gi|47115580|sp|O50016.1|AP2S1_MAIZE (RecName: Full=AP-2 complex subunit sigma; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Clathrin coat assembly protein AP17; AltName: Full=Clathrin coat-associated protein AP17; AltName: Full=Plasma membrane adaptor AP-2 17 kDa protein; AltName: Full=Sigma2-adaptin)

HSP 1 Score: 172.94 bits (437), Expect = 2.197e-55
Identity = 86/131 (65.65%), Postives = 103/131 (78.63%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT--IVDEMFLAGELRETSQTK 138
            I+FIL+QNR GKTRLAK+Y   E  EK K+  EVH LV  RD K TNFVEFR +K+IYRRYAGL+F ICVD++DN L YLE IH FVE+L+ +F NVCELDLVFNF+KVY   I+DE  LAGEL+ETS+ +
Sbjct:    2 IRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSICVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYRYLILDEFILAGELQETSKRQ 132
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Match: gi|74626304|sp|Q9Y7L6.1|AP2S_SCHPO (RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adaptin small chain; AltName: Full=Clathrin assembly protein 2 sigma small chain; AltName: Full=Sigma2-adaptin)

HSP 1 Score: 162.54 bits (410), Expect = 4.330e-51
Identity = 77/142 (54.23%), Postives = 106/142 (74.65%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAK-HTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            I+FILIQNR GK RL+K+Y  F+ +EK +L   +H L++ R+ K   NF+E+ N K++YRRYAGLYFC CVD +DN+L  LE IH FVE+L+ +F NVCELDL+FNFYKV  I+DE+ L GE+ E+++  VL+++  L  LE
Sbjct:    2 IQFILIQNRHGKNRLSKYYVPFDDDEKVRLKARIHQLISQRNQKFQANFLEWENSKLVYRRYAGLYFCFCVDSTDNDLAILEMIHFFVEILDSFFGNVCELDLIFNFYKVSAILDEIILGGEIGESNKKSVLERIEALEKLE 143
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Match: gi|75272482|sp|Q8LEZ8.1|AP1S1_ARATH (RecName: Full=AP-1 complex subunit sigma-1; AltName: Full=Adaptor AP-1 19 kDa protein; AltName: Full=Adaptor protein complex AP-1 sigma-1 subunit; AltName: Full=Adaptor-related protein complex 1 sigma-1 subunit; AltName: Full=Clathrin assembly protein complex 1 sigma-1 small chain; AltName: Full=Clathrin assembly small subunit protein AP19-1; Short=AtAP19-1; AltName: Full=Sigma 1 subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1; AltName: Full=Sigma1-adaptin)

HSP 1 Score: 155.221 bits (391), Expect = 4.785e-48
Identity = 66/132 (50.00%), Postives = 99/132 (75.00%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLK 141
            I F+L+ +R GK RL KWY+ +  +E+ K+I E+  ++  R  K  NF+E+R YK++Y+RYA LYFC+C+D +DN L  LE IH++VE+L+ YF +VCELDL+FNF+K Y I+DE+ +AGEL+E+S+  V +
Sbjct:    2 IHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYKRYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVAR 133
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BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Match: gi|918661161|ref|XP_005413900.2| (PREDICTED: AP-2 complex subunit sigma isoform X1 [Chinchilla lanigera])

HSP 1 Score: 273.478 bits (698), Expect = 2.603e-92
Identity = 132/150 (88.00%), Postives = 140/150 (93.33%), Query Frame = 0 
Query:    1 LQGHLVAMPIKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            +QG   A  I+FILIQNRAGKTRLAKWY  F+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRN+KIIYRRYAGLYFCICVDVSDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQLLML SLE
Sbjct:    3 VQGFDSAQRIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVSDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE 152
[Close]
BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Match: gi|1104911564|ref|XP_019065644.1| (PREDICTED: AP-2 complex subunit sigma isoform X2 [Fukomys damarensis])

HSP 1 Score: 273.092 bits (697), Expect = 8.368e-92
Identity = 131/149 (87.92%), Postives = 140/149 (93.96%), Query Frame = 0 
Query:    2 QGHLVAMPIKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            +G   A+ I+FILIQNRAGKTRLAKWY  F+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRN+KIIYRRYAGLYFCICVDVSDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQLLML SLE
Sbjct:   35 RGREKALEIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVSDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE 183
[Close]
BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Match: gi|731252728|ref|XP_010639139.1| (PREDICTED: AP-2 complex subunit sigma isoform X1 [Fukomys damarensis] >gi|676271175|gb|KFO26276.1| AP-2 complex subunit sigma [Fukomys damarensis])

HSP 1 Score: 273.092 bits (697), Expect = 1.205e-91
Identity = 132/145 (91.03%), Postives = 139/145 (95.86%), Query Frame = 0 
Query:    6 VAMPIKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            VAM I+FILIQNRAGKTRLAKWY  F+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRN+KIIYRRYAGLYFCICVDVSDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQLLML SLE
Sbjct:   42 VAM-IRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVSDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE 185
[Close]
BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Match: gi|762149800|ref|XP_011412840.1| (PREDICTED: AP-2 complex subunit sigma isoform X1 [Crassostrea gigas])

HSP 1 Score: 271.937 bits (694), Expect = 1.580e-91
Identity = 129/147 (87.76%), Postives = 141/147 (95.92%), Query Frame = 0 
Query:    4 HLVAMPIKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            +LV + I+FILIQNRAGKTRLAKWY  F+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRN+KI+YRRYAGLYFCICVDVSDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVY++VDEMFLAGE+RETSQTKVLKQLLML+SLE
Sbjct:   19 YLVKLQIRFILIQNRAGKTRLAKWYMHFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVSDNNLMYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYSVVDEMFLAGEIRETSQTKVLKQLLMLSSLE 165
[Close]
BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Match: gi|1196781876|ref|XP_021101614.1| (AP-2 complex subunit sigma isoform X1 [Heterocephalus glaber])

HSP 1 Score: 271.166 bits (692), Expect = 2.261e-91
Identity = 130/147 (88.44%), Postives = 137/147 (93.20%), Query Frame = 0 
Query:    4 HLVAMPIKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            H     I+FILIQNRAGKTRLAKWY  F+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRN+KIIYRRYAGLYFCICVDVSDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQLLML SLE
Sbjct:   16 HAQTAKIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVSDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE 162
[Close]
BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Match: gi|528768556|gb|EPY88215.1| (AP-2 complex subunit sigma-like protein [Camelus ferus])

HSP 1 Score: 271.937 bits (694), Expect = 2.475e-91
Identity = 130/144 (90.28%), Postives = 138/144 (95.83%), Query Frame = 0 
Query:    7 AMPIKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            A PI+FILIQNRAGKTRLAKWY  F+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRN+KIIYRRYAGLYFCICVDV+DNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQLLML SLE
Sbjct:   39 AHPIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE 182
[Close]
BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Match: gi|1196781878|ref|XP_021101615.1| (AP-2 complex subunit sigma isoform X2 [Heterocephalus glaber])

HSP 1 Score: 270.396 bits (690), Expect = 3.062e-91
Identity = 131/147 (89.12%), Postives = 140/147 (95.24%), Query Frame = 0 
Query:    5 LVAMP-IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            L+ +P I+FILIQNRAGKTRLAKWY  F+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRN+KIIYRRYAGLYFCICVDVSDNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQLLML SLE
Sbjct:    3 LLVLPQIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVSDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE 149
[Close]
BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Match: gi|954567895|ref|XP_014607995.1| (PREDICTED: AP-2 complex subunit sigma isoform X1 [Polistes canadensis])

HSP 1 Score: 270.396 bits (690), Expect = 3.225e-91
Identity = 128/146 (87.67%), Postives = 141/146 (96.58%), Query Frame = 0 
Query:    5 LVAMPIKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            + ++ I+FILIQNRAGKTRLAKWY +F+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRN+KI+YRRYAGLYFCICVDV+DNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQLLMLNSLE
Sbjct:    1 MASIGIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLNSLE 146
[Close]
BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Match: gi|1133437833|ref|XP_019875200.1| (PREDICTED: LOW QUALITY PROTEIN: AP-2 complex subunit sigma [Aethina tumida])

HSP 1 Score: 269.626 bits (688), Expect = 4.981e-91
Identity = 129/141 (91.49%), Postives = 138/141 (97.87%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            I+FILIQNRAGKTRLAKWY SF+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRN+KI+YRRYAGLYFCICVDV+DNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQLLMLNSLE
Sbjct:    2 IRFILIQNRAGKTRLAKWYMSFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLNSLE 142
[Close]
BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Match: gi|1061483405|gb|ODN00629.1| (AP-2 complex subunit sigma [Orchesella cincta])

HSP 1 Score: 269.24 bits (687), Expect = 8.342e-91
Identity = 129/141 (91.49%), Postives = 137/141 (97.16%), Query Frame = 0 
Query:   10 IKFILIQNRAGKTRLAKWYTSFEAEEKQKLIEEVHALVTVRDAKHTNFVEFRNYKIIYRRYAGLYFCICVDVSDNNLFYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTIVDEMFLAGELRETSQTKVLKQLLMLNSLE 150
            I+FILIQNRAGKTRLAKWY +F+ +EKQKLIEEVHA+VTVRDAKHTNFVEFRNYKI+YRRYAGLYFCICVDV DNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYT+VDEMFLAGE+RETSQTKVLKQLLMLNSLE
Sbjct:    2 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNYKIVYRRYAGLYFCICVDVGDNNLNYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLNSLE 142
The following BLAST results are available for this feature:
BLAST of ap-2 complex subunit sigma isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAG000000063821.174e-9389.36supercontig:LSalAtl2s:LSalAtl2s34:495818:496246:-1... [more]
EMLSAG000000015085.497e-4447.01supercontig:LSalAtl2s:LSalAtl2s125:280180:281536:1... [more]
EMLSAG000000072575.382e-4043.26supercontig:LSalAtl2s:LSalAtl2s408:42626:44752:1 g... [more]
EMLSAG000000091737.193e-3242.34supercontig:LSalAtl2s:LSalAtl2s57:41205:42872:1 ge... [more]
EMLSAG000000012621.010e-3040.14supercontig:LSalAtl2s:LSalAtl2s1206:25785:30904:1 ... [more]
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BLAST of ap-2 complex subunit sigma isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|51316970|sp|P62744.1|AP2S1_RAT2.363e-9290.78RecName: Full=AP-2 complex subunit sigma; AltName:... [more]
gi|74617209|sp|Q7SAQ1.1|AP2S_NEUCR5.914e-6366.90RecName: Full=AP-2 complex subunit sigma; AltName:... [more]
gi|85700951|sp|Q4ICG5.1|AP2S_GIBZE1.847e-6267.61RecName: Full=AP-2 complex subunit sigma; AltName:... [more]
gi|74672344|sp|Q4WS49.1|AP2S_ASPFU2.298e-6266.21RecName: Full=AP-2 complex subunit sigma; AltName:... [more]
gi|182627624|sp|Q54H39.2|AP2S_DICDI2.742e-6265.00RecName: Full=AP-2 complex subunit sigma; AltName:... [more]
gi|74598753|sp|Q5BFF8.1|AP2S_EMENI9.032e-6266.21RecName: Full=AP-2 complex subunit sigma; AltName:... [more]
gi|75148767|sp|Q84WL9.1|AP2S_ARATH7.548e-6062.41RecName: Full=AP-2 complex subunit sigma; AltName:... [more]
gi|47115580|sp|O50016.1|AP2S1_MAIZE2.197e-5565.65RecName: Full=AP-2 complex subunit sigma; AltName:... [more]
gi|74626304|sp|Q9Y7L6.1|AP2S_SCHPO4.330e-5154.23RecName: Full=AP-2 complex subunit sigma; AltName:... [more]
gi|75272482|sp|Q8LEZ8.1|AP1S1_ARATH4.785e-4850.00RecName: Full=AP-1 complex subunit sigma-1; AltNam... [more]

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BLAST of ap-2 complex subunit sigma isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|918661161|ref|XP_005413900.2|2.603e-9288.00PREDICTED: AP-2 complex subunit sigma isoform X1 [... [more]
gi|1104911564|ref|XP_019065644.1|8.368e-9287.92PREDICTED: AP-2 complex subunit sigma isoform X2 [... [more]
gi|731252728|ref|XP_010639139.1|1.205e-9191.03PREDICTED: AP-2 complex subunit sigma isoform X1 [... [more]
gi|762149800|ref|XP_011412840.1|1.580e-9187.76PREDICTED: AP-2 complex subunit sigma isoform X1 [... [more]
gi|1196781876|ref|XP_021101614.1|2.261e-9188.44AP-2 complex subunit sigma isoform X1 [Heterocepha... [more]
gi|528768556|gb|EPY88215.1|2.475e-9190.28AP-2 complex subunit sigma-like protein [Camelus f... [more]
gi|1196781878|ref|XP_021101615.1|3.062e-9189.12AP-2 complex subunit sigma isoform X2 [Heterocepha... [more]
gi|954567895|ref|XP_014607995.1|3.225e-9187.67PREDICTED: AP-2 complex subunit sigma isoform X1 [... [more]
gi|1133437833|ref|XP_019875200.1|4.981e-9191.49PREDICTED: LOW QUALITY PROTEIN: AP-2 complex subun... [more]
gi|1061483405|gb|ODN00629.1|8.342e-9191.49AP-2 complex subunit sigma [Orchesella cincta][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1159_size58420supercontigscaffold1159_size58420:34456..35442 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1159_size58420-snap-gene-0.14-mRNA-1maker-scaffold1159_size58420-snap-gene-0.14-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1159_size58420:34456..35442+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1159_size58420-snap-gene-0.14 ID=maker-scaffold1159_size58420-snap-gene-0.14|Name=ap-2 complex subunit sigma isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=987bp|location=Sequence derived from alignment at scaffold1159_size58420:34456..35442+ (Tigriopus kingsejongensis)
CTCCTTCTCTCGCTGTCGCCTCTTGAAGTGACTTGAGTACTTGAGCTAGT
AGTCCTGTCTCTCTAGTCCGGCCGAGGGGCCGGACTAGAGCGACAGGCTC
GCGAAGCTCTCCGTCGGACTAGCGCATGCGCTAGCCCGATCCAGGCCTGC
CAGCCGGATCCTCGTTGGGCGTTGAGGCGAGAATCAGGCCGATCCAAGAA
CTGCTGCTCTGAGCGAGTGTGTGCCACTGTGTGCCACTAGATTGCGATTG
GTATTGATCTCGGTGTGTGTGTCACACGTTCAGACGAGTTGAAAGAACCC
CGGTGGCGGTTATCTCGGTGAGGGGCGTTATTGCAGGGACATCTGGTCGC
CATGCCCATCAAATTCATCCTCATCCAGAATCGGGCGGGTAAGACCCGCC
TGGCCAAATGGTACACCAGTTTTGAGGCCGAGGAGAAGCAGAAGCTCATC
GAGGAGGTGCACGCCTTGGTCACGGGTAGGTTAGCTCGGGGACTCGGGCT
GGTGCCCCGTGGCTAATGATCTGTTTTACTCGGATTAGTTCGCGATGCCA
AGCACACCAACTTCGTGGAGTTTCGCAACTACAAGATCATCTATCGCCGC
TATGCCGGACTCTACTTCTGCATCTGCGTGGACGTGTCCGACAACAATCT
CTTCTACTTGGAGGCCATTCACAACTTTGTCGAGGTGAGTCCGACGGTCT
CGTCGTCTCCGACGAATGCCCACTAATTCGGCTCTCTGACCCCCGATCCA
GGTCCTCAACGAATACTTCCATAACGTGTGCGAGCTCGATTTGGTGTTCA
ACTTTTACAAGGTCTACACAATAGTGGACGAGATGTTCTTGGCCGGCGAA
TTGCGGGAAACCAGTCAGACCAAAGTATTAAAGCAATTACTCATGTTGAA
CTCCCTAGAGTAGGGCTGGCCCTACATGGGCCACTACTGTGTCCCGTGTG
TAATCGGTTGCAAAATAAACGCCCTCGGCCATGTTCA
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Synonyms
The feature 'ap-2 complex subunit sigma isoform x1' has the following synonyms
Synonym
Tk06245
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