glycine cleavage system protein t, maker-scaffold1174_size57200-snap-gene-0.0 (gene) Tigriopus kingsejongensis

Overview
Nameglycine cleavage system protein t
Unique Namemaker-scaffold1174_size57200-snap-gene-0.0
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of glycine cleavage system protein t vs. L. salmonis genes
Match: EMLSAG00000001340 (supercontig:LSalAtl2s:LSalAtl2s1223:45456:48327:-1 gene:EMLSAG00000001340 transcript:EMLSAT00000001340 description:"maker-LSalAtl2s1223-snap-gene-0.7")

HSP 1 Score: 56.9954 bits (136), Expect = 2.343e-10
Identity = 35/140 (25.00%), Postives = 72/140 (51.43%), Query Frame = 0 
Query:    2 GEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKH--NTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIENGTLDLEVLK 139
             +F++ G   +  +QK+ SND    T G      L N  GG  +D ++ +  E  + ++       +   W++ H  N   V ++D++  ++++++ GPK+ + +Q LT+ D++  PF  ++V D  G  +G + L V +
Sbjct:  535 AKFIINGSGVVSYLQKLCSNDVDIPTGGIIPTGML-NHYGGYENDCMLIRQGENSFFMISPTQQQTRILHWMANHLPNNNTVGLQDVTSMFTVISVCGPKSKDLVQRLTNTDVNMTPF-TYKVCDM-GYASGVMVLAVTQ 671
[Close]
BLAST of glycine cleavage system protein t vs. L. salmonis genes
Match: EMLSAG00000010435 (supercontig:LSalAtl2s:LSalAtl2s690:60426:63674:-1 gene:EMLSAG00000010435 transcript:EMLSAT00000010435 description:"maker-LSalAtl2s690-augustus-gene-0.8")

HSP 1 Score: 56.6102 bits (135), Expect = 2.741e-10
Identity = 30/117 (25.64%), Postives = 60/117 (51.28%), Query Frame = 0 
Query:    7 TGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLT-----SVDLSKIPFY 118
            +G   +D +Q + SND   + IG   ++ + N++GG  +D  + ++ + +Y+L+  +    K + W+  H    V ++D++  Y+ L I GP +   +  LT     S+D    PF+
Sbjct:  578 SGTEVVDFLQHMCSND-VDVPIGTIVHTGMQNEKGGYENDCSLARLSKNRYMLMSPSVQQMKSYTWMKYHLPSNVILQDVTSLYTALCIMGPHSRALLSKLTLENLESLDQKSFPFF 693
[Close]
BLAST of glycine cleavage system protein t vs. L. salmonis genes
Match: EMLSAG00000009135 (supercontig:LSalAtl2s:LSalAtl2s575:133419:152703:-1 gene:EMLSAG00000009135 transcript:EMLSAT00000009135 description:"maker-LSalAtl2s575-snap-gene-1.21")

HSP 1 Score: 53.1434 bits (126), Expect = 3.803e-9
Identity = 46/155 (29.68%), Postives = 64/155 (41.29%), Query Frame = 0 
Query:   10 TAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKH--------------------NTMGVDMKDLSM----------------DYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGI 128
            T +DL  K    D+  LTI         N++GGIVDDLI+     +   LV NA   EKD   + K                     N + +D+KD ++                D++L+AIQGPK  E  Q  T VDL K+ F    +    G+
Sbjct:   89 TTLDL--KTLKEDSGSLTI-------FTNEKGGIVDDLIVMNTSLDFLYLVTNAGCKEKDILLMKKKVLEMKRNYIICLHINITTLSNILALDLKDNTIFLLAXDNMDIEXEIINDHALIAIQGPKMAEYFQPHTDVDLKKLKFMQTSLGTVCGV 234
[Close]
BLAST of glycine cleavage system protein t vs. SwissProt
Match: gi|166221549|sp|A6GXW3.1|GCST_FLAPJ (RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein)

HSP 1 Score: 199.134 bits (505), Expect = 1.842e-62
Identity = 91/133 (68.42%), Postives = 114/133 (85.71%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIENGTL 133
            MGEF L G  A+ LIQKV+SNDA+KL  GKAQYSCLPN++GGIVDDLIIYKI +  Y+LVVNASN+EKDW+WIS HN +GVDM++LS  YSLLAIQGPKA EAMQSLTS+DL  +P+Y+F++ +FAG+++ T+
Sbjct:   51 MGEFFLKGENALALIQKVTSNDASKLVDGKAQYSCLPNNEGGIVDDLIIYKIADNHYMLVVNASNIEKDWNWISSHNDLGVDMQNLSDSYSLLAIQGPKAAEAMQSLTSIDLVNMPYYSFQIGEFAGLKDVTV 183
[Close]
BLAST of glycine cleavage system protein t vs. SwissProt
Match: gi|166221559|sp|A6L8T3.1|GCST_PARD8 (RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein)

HSP 1 Score: 168.318 bits (425), Expect = 1.885e-50
Identity = 74/130 (56.92%), Postives = 99/130 (76.15%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEF + GP A+  IQ V+SNDA+ L +GKAQY+C PND+GGIVDDL++Y  + E+YLLVVNA N++KDW+W   HNT+G ++++ S   + LAIQGPKA E +Q LT VDLS IP+Y+F   +FAG +N
Sbjct:   51 MGEFWVKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGNIDKDWEWCVSHNTVGAELENSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFVTGEFAGCKN 180
[Close]
BLAST of glycine cleavage system protein t vs. SwissProt
Match: gi|166221538|sp|A6L6X5.1|GCST_BACV8 (RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein)

HSP 1 Score: 165.236 bits (417), Expect = 2.587e-49
Identity = 69/127 (54.33%), Postives = 99/127 (77.95%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAG 127
            MGEF + GP A++ +Q+V+SN+   L +GKAQY+C PN++GGIVDDL++Y  + E+YLLVVNA+N+EKDW+W   HNT+G ++++ S   + LAIQGPKA+E +Q LT V+LS+IP+Y F   +FAG
Sbjct:   51 MGEFWVKGPNALEFLQQVTSNNVATLPVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAANIEKDWNWCVSHNTVGAELENASDRMAQLAIQGPKAMEVLQKLTPVNLSEIPYYAFTTGEFAG 177
[Close]
BLAST of glycine cleavage system protein t vs. SwissProt
Match: gi|59797696|sp|Q64WS3.1|GCST_BACFR (RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein >gi|81316124|sp|Q5LFT6.1|GCST_BACFN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein)

HSP 1 Score: 163.696 bits (413), Expect = 1.149e-48
Identity = 70/130 (53.85%), Postives = 101/130 (77.69%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEF + GP A+D +QKV+SN+   L  GK QY+C PN+ GGIVDDL++Y+ + E+YLLVVNASN+EKDW+W   HNT G ++++ S + + LA+QGPKA++A+Q LT ++L+ IP+Y F+V +FAG +N
Sbjct:   51 MGEFWVKGPHALDFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASNIEKDWNWCISHNTEGAELENSSDNMAQLAVQGPKAIQALQKLTDINLADIPYYTFKVGEFAGEKN 180
[Close]
BLAST of glycine cleavage system protein t vs. SwissProt
Match: gi|31340122|sp|Q89YZ6.1|GCST_BACTN (RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein)

HSP 1 Score: 161.77 bits (408), Expect = 5.212e-48
Identity = 71/130 (54.62%), Postives = 97/130 (74.62%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEF + GP A+  +QKV+SN+   L  GK QY+C PN++GGIVDDL++Y  + E+YLLVVNA+N+EKDW+W   HNT G ++++ S + + LA+QGPKA+ A+Q LT +DLS IP+Y F V  FAG EN
Sbjct:   51 MGEFWVKGPQALAFLQKVTSNNVAALVPGKIQYTCFPNEEGGIVDDLLVYCYEPEKYLLVVNAANIEKDWNWCVSHNTEGAELENSSDNMAQLAVQGPKAILALQKLTDIDLSAIPYYTFTVGRFAGKEN 180
[Close]
BLAST of glycine cleavage system protein t vs. SwissProt
Match: gi|59797832|sp|Q7MUG4.1|GCST_PORGI (RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein >gi|238691465|sp|B2RI74.1|GCST_PORG3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein)

HSP 1 Score: 158.688 bits (400), Expect = 8.370e-47
Identity = 67/130 (51.54%), Postives = 96/130 (73.85%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEF + GP A+  +QKVSSNDA+KL +G+ QY C PN+ GGIVDD ++Y+ +EE+Y++V NA+N+ KDW W  + NTMG  +++ S + + LA+QGPKA E MQ LT +DL++I +Y F+V  FAG  +
Sbjct:   51 MGEFWVKGPNALRFLQKVSSNDASKLAVGQVQYCCFPNNDGGIVDDFLLYRYEEEKYMMVPNAANIAKDWAWCRQQNTMGAILENASDNIAQLAVQGPKATEVMQRLTDIDLNEITYYTFKVGSFAGCPD 180
[Close]
BLAST of glycine cleavage system protein t vs. SwissProt
Match: gi|229807551|sp|B2A2T4.1|GCST_NATTJ (RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein)

HSP 1 Score: 123.635 bits (309), Expect = 2.957e-33
Identity = 58/130 (44.62%), Postives = 91/130 (70.00%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNF-EVSDFAGIE 129
            MGE ++ GP A++ +QK+  ND  +L  GK  Y+ +  + GG VDD +IYK+ E ++LL+VNA+N +KD++W+ ++NT GV++K+LS +Y  +AIQGPKA + +Q LT   L +I F+NF E  D  G++
Sbjct:   54 MGEIIVEGPKALEYLQKMVPNDVARLKPGKILYTPMCYENGGTVDDFLIYKMDENKFLLIVNAANTDKDFEWLQENNTEGVELKNLSDEYGQIAIQGPKAEKILQRLTDTPLKEIKFFNFKEDVDLDGVK 183
[Close]
BLAST of glycine cleavage system protein t vs. SwissProt
Match: gi|226711364|sp|B7GH71.1|GCST_ANOFW (RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein)

HSP 1 Score: 121.709 bits (304), Expect = 1.467e-32
Identity = 59/131 (45.04%), Postives = 92/131 (70.23%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNF-EVSDFAGIEN 130
            MGEF + G  ++  +QK+ +ND  KLT G+AQY+ +  + GG VDDL++YK  ++ YLLVVNA+N+EKD+ W+S+H    V++ ++S D + LA+QGP A + +Q LT+VDLS + F+ F +  D AG++ 
Sbjct:   52 MGEFEVKGKDSVAFLQKMMTNDVAKLTDGRAQYTLMCYEDGGTVDDLLVYKKADDHYLLVVNAANIEKDFAWLSEHVVGDVELVNISNDIAQLALQGPLAEKVLQQLTTVDLSTMKFFAFADHVDVAGVQT 182
[Close]
BLAST of glycine cleavage system protein t vs. SwissProt
Match: gi|254797877|sp|B1HSN7.1|GCST_LYSSC (RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein)

HSP 1 Score: 121.324 bits (303), Expect = 2.005e-32
Identity = 56/122 (45.90%), Postives = 86/122 (70.49%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDW-ISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFE 121
            MGE L+TGP A++ +Q + SND +K+  G+AQY+ +  + GG+VDDL+ YK+ ++ YLL VNA+N+EKD+DW +   +   V + + S  Y+ +A+QGP A E +QSLTS D+S I F+ F+
Sbjct:   55 MGEILVTGPDALNFLQNLLSNDVSKIATGQAQYTAMCYENGGVVDDLLTYKLADDHYLLCVNAANIEKDYDWMLENQHQYDVTIDNQSDAYAQIALQGPLAEEVLQSLTSTDVSAIKFFRFQ 176
[Close]
BLAST of glycine cleavage system protein t vs. SwissProt
Match: gi|229807549|sp|B1YLN6.1|GCST_EXIS2 (RecName: Full=Aminomethyltransferase; AltName: Full=Glycine cleavage system T protein)

HSP 1 Score: 120.939 bits (302), Expect = 2.343e-32
Identity = 58/129 (44.96%), Postives = 88/129 (68.22%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIE 129
            MGE  ++G  A+  +Q+  SND +K+ IG+AQY+ L  + GG VDDL++Y++ E+ YLLVVNASN+EKD   + ++ T  V +++ S  Y  +A+QGPKAVE +Q LT++ L  I F+ F   + AG+E
Sbjct:   55 MGELFVSGSDALAFLQQTLSNDISKIAIGQAQYNVLCQEDGGTVDDLLVYRLDEQDYLLVVNASNIEKDEAHLRQYLTGDVLLENQSDAYGQIAVQGPKAVEVLQELTALKLEDIKFFRFAQGELAGVE 183
[Close]
BLAST of glycine cleavage system protein t vs. nr
Match: gi|495086720|ref|WP_007811543.1| (glycine cleavage system aminomethyltransferase GcvT [Flavobacterium sp. CF136] >gi|398067739|gb|EJL59218.1| glycine cleavage system T protein [Flavobacterium sp. CF136])

HSP 1 Score: 228.024 bits (580), Expect = 3.192e-71
Identity = 104/130 (80.00%), Postives = 122/130 (93.85%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEFLLTGP A+ LIQKV+SNDA+ LTIG+AQYSCLPN++GGIVDDLI+YK+KEEQYLLVVNASN+EKDW+WIS HN +GVDMK+LS DYSLLAIQGPKAVEAMQ+L+S+DLS IP+Y+FEV DFAGIE+
Sbjct:   51 MGEFLLTGPNALALIQKVTSNDASTLTIGRAQYSCLPNNEGGIVDDLIVYKMKEEQYLLVVNASNIEKDWNWISSHNDLGVDMKNLSDDYSLLAIQGPKAVEAMQALSSIDLSTIPYYHFEVGDFAGIEH 180
[Close]
BLAST of glycine cleavage system protein t vs. nr
Match: gi|1225009642|ref|WP_093024225.1| (glycine cleavage system aminomethyltransferase GcvT [Pustulibacterium marinum] >gi|1097740803|emb|SFU42538.1| aminomethyltransferase [Pustulibacterium marinum])

HSP 1 Score: 227.639 bits (579), Expect = 3.771e-71
Identity = 105/130 (80.77%), Postives = 123/130 (94.62%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEFL++GP A+DLIQK+SSNDA+KLTIGKAQYSC+PND+GGIVDDL+IYKIKEEQYLLVVNASN+EKDW+WI+ HNTM  +MK++S +YSLLAIQGPKAVEAMQSLTSVDLS I +YNFEV+DFAGIE+
Sbjct:   51 MGEFLVSGPNALDLIQKISSNDASKLTIGKAQYSCMPNDKGGIVDDLLIYKIKEEQYLLVVNASNIEKDWNWIASHNTMEAEMKNISDNYSLLAIQGPKAVEAMQSLTSVDLSAIKYYNFEVADFAGIEH 180
[Close]
BLAST of glycine cleavage system protein t vs. nr
Match: gi|1120556277|ref|WP_073413941.1| (glycine cleavage system aminomethyltransferase GcvT [Flavobacterium defluvii] >gi|1110237795|emb|SHG20387.1| aminomethyltransferase [Flavobacterium defluvii])

HSP 1 Score: 227.639 bits (579), Expect = 4.097e-71
Identity = 106/130 (81.54%), Postives = 121/130 (93.08%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEFLLTGP A+ LIQKV+SNDA+ LTIG+AQYSCLPN++GGIVDDLIIYK+KEEQYLLVVNASN+EKDW+WIS HN +GV+M++LS DYSLLAIQGPKAVEAMQSLTSVDLS I +Y+FEV DFAGIEN
Sbjct:   51 MGEFLLTGPNALALIQKVTSNDASTLTIGRAQYSCLPNNEGGIVDDLIIYKMKEEQYLLVVNASNIEKDWNWISSHNDLGVEMRNLSDDYSLLAIQGPKAVEAMQSLTSVDLSAITYYHFEVGDFAGIEN 180
[Close]
BLAST of glycine cleavage system protein t vs. nr
Match: gi|652138417|ref|WP_026704880.1| (glycine cleavage system aminomethyltransferase GcvT [Flavobacterium soli])

HSP 1 Score: 226.868 bits (577), Expect = 6.974e-71
Identity = 105/130 (80.77%), Postives = 119/130 (91.54%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEFLLTGP A+ LIQKV+SNDA+ LTIG+AQYSCLPN  GGIVDDLI+Y++KEEQYLLVVNASN+EKDW+WIS HN +GVDMK+LS DYSLLAIQGPKAVEAMQ+LTSVDLS IP+Y+FEV  FAGIEN
Sbjct:   51 MGEFLLTGPNALALIQKVTSNDASTLTIGRAQYSCLPNTHGGIVDDLIVYRMKEEQYLLVVNASNIEKDWEWISSHNDLGVDMKNLSDDYSLLAIQGPKAVEAMQALTSVDLSAIPYYHFEVGPFAGIEN 180
[Close]
BLAST of glycine cleavage system protein t vs. nr
Match: gi|1275623336|ref|WP_099715708.1| (glycine cleavage system aminomethyltransferase GcvT [Flavobacterium sp. 11] >gi|1273950256|gb|PIF63193.1| aminomethyltransferase [Flavobacterium sp. 11])

HSP 1 Score: 226.868 bits (577), Expect = 7.774e-71
Identity = 105/130 (80.77%), Postives = 120/130 (92.31%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEFLLTGP A+ LIQKV+SNDA+ LTIG+AQYSCLPN+ GGIVDDLI+YK+KEEQYLLVVNASN++KDWDWIS HN +GV+M++LS DYSLLAIQGPKAVEAMQSLTS DLS IP+Y+FEV DFAGIEN
Sbjct:   51 MGEFLLTGPNALALIQKVTSNDASTLTIGRAQYSCLPNNDGGIVDDLIVYKMKEEQYLLVVNASNIDKDWDWISAHNDLGVEMRNLSDDYSLLAIQGPKAVEAMQSLTSKDLSAIPYYHFEVGDFAGIEN 180
[Close]
BLAST of glycine cleavage system protein t vs. nr
Match: gi|1219526088|ref|WP_089479496.1| (glycine cleavage system aminomethyltransferase GcvT [Flavobacterium araucananum] >gi|1218279793|gb|OXG06554.1| glycine cleavage system protein T [Flavobacterium araucananum])

HSP 1 Score: 226.483 bits (576), Expect = 1.281e-70
Identity = 102/130 (78.46%), Postives = 123/130 (94.62%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEFLLTGP A+ LIQKV+SNDA+ LTIG+AQYSCLPN++GGIVDDLI+YK+KEEQYLLVVNASN+EKDW+WIS HN +GV+MK+LS DYSLLAIQGPKAVEAMQ+L+S+DL+ IP+Y+FEV+DFAGI+N
Sbjct:   51 MGEFLLTGPNALALIQKVTSNDASTLTIGRAQYSCLPNNEGGIVDDLIVYKMKEEQYLLVVNASNIEKDWNWISSHNDLGVEMKNLSDDYSLLAIQGPKAVEAMQALSSIDLAAIPYYHFEVADFAGIDN 180
[Close]
BLAST of glycine cleavage system protein t vs. nr
Match: gi|1223453493|ref|WP_091491140.1| (glycine cleavage system aminomethyltransferase GcvT [Flavobacterium phragmitis] >gi|1099471686|emb|SFC78752.1| aminomethyltransferase [Flavobacterium phragmitis])

HSP 1 Score: 226.098 bits (575), Expect = 1.352e-70
Identity = 106/130 (81.54%), Postives = 121/130 (93.08%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEFLLTGP A+ LIQKV+SNDA+ LTIG+AQYSCLPN++GGIVDDLIIYK+KEEQYLLVVNASN+EKDW+WIS HN +GV+MK+LS DYSLLAIQGPKAVEAMQ+LTSVDLS I +Y+FEV DFAGIEN
Sbjct:   51 MGEFLLTGPNALALIQKVTSNDASILTIGRAQYSCLPNNEGGIVDDLIIYKMKEEQYLLVVNASNIEKDWNWISSHNDLGVEMKNLSDDYSLLAIQGPKAVEAMQALTSVDLSAIAYYHFEVGDFAGIEN 180
[Close]
BLAST of glycine cleavage system protein t vs. nr
Match: gi|652312979|ref|WP_026715853.1| (glycine cleavage system aminomethyltransferase GcvT [Flavobacterium gelidilacus])

HSP 1 Score: 226.098 bits (575), Expect = 1.412e-70
Identity = 108/130 (83.08%), Postives = 119/130 (91.54%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEFLL+G  A+ LIQKVSSNDA+ L +GKAQYSC+PN  GGIVDDLIIYKIKEEQYLLVVNASN+EKDW+WIS HN +GVDMKDLS DYSLLAIQGPKAVEAMQSLTSVDLS+I +Y+FEVSDFAGIEN
Sbjct:   51 MGEFLLSGENALALIQKVSSNDASTLEVGKAQYSCMPNSDGGIVDDLIIYKIKEEQYLLVVNASNIEKDWNWISSHNDLGVDMKDLSEDYSLLAIQGPKAVEAMQSLTSVDLSQIKYYHFEVSDFAGIEN 180
[Close]
BLAST of glycine cleavage system protein t vs. nr
Match: gi|652332078|ref|WP_026729304.1| (glycine cleavage system aminomethyltransferase GcvT [Flavobacterium denitrificans])

HSP 1 Score: 226.098 bits (575), Expect = 1.813e-70
Identity = 105/130 (80.77%), Postives = 121/130 (93.08%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEFLLTGP A+ LIQKV+SNDA+ LTIG+AQYSCLPN++GGIVDDLIIYK+KEEQYLLVVNASN+EKDW+WI+ HN +GVDMK++S DYSLLAIQGPKAVEAMQSLTSV+LS I +Y+FEV DFAGIEN
Sbjct:   51 MGEFLLTGPNALALIQKVTSNDASTLTIGRAQYSCLPNNEGGIVDDLIIYKMKEEQYLLVVNASNIEKDWNWITSHNDLGVDMKNISDDYSLLAIQGPKAVEAMQSLTSVNLSAITYYHFEVGDFAGIEN 180
[Close]
BLAST of glycine cleavage system protein t vs. nr
Match: gi|1223130027|ref|WP_091170524.1| (glycine cleavage system aminomethyltransferase GcvT [Flavobacterium sinopsychrotolerans] >gi|1094395141|emb|SEO22080.1| aminomethyltransferase [Flavobacterium sinopsychrotolerans])

HSP 1 Score: 225.713 bits (574), Expect = 1.914e-70
Identity = 105/130 (80.77%), Postives = 120/130 (92.31%), Query Frame = 0 
Query:    1 MGEFLLTGPTAIDLIQKVSSNDATKLTIGKAQYSCLPNDQGGIVDDLIIYKIKEEQYLLVVNASNMEKDWDWISKHNTMGVDMKDLSMDYSLLAIQGPKAVEAMQSLTSVDLSKIPFYNFEVSDFAGIEN 130
            MGEFLLTGP A+ LIQKV+SNDA+ LTIG+AQYSCLPN+ GGIVDDLI+YK+K+EQYLLVVNASN++KDWDWIS HN +GV+MK+LS DYSLLAIQGPKAVEAMQSLTS DLS IP+Y+FEV DFAGIEN
Sbjct:   51 MGEFLLTGPNALALIQKVTSNDASTLTIGRAQYSCLPNNDGGIVDDLIVYKMKDEQYLLVVNASNIDKDWDWISAHNDLGVEMKNLSDDYSLLAIQGPKAVEAMQSLTSKDLSAIPYYHFEVGDFAGIEN 180
The following BLAST results are available for this feature:
BLAST of glycine cleavage system protein t vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAG000000013402.343e-1025.00supercontig:LSalAtl2s:LSalAtl2s1223:45456:48327:-1... [more]
EMLSAG000000104352.741e-1025.64supercontig:LSalAtl2s:LSalAtl2s690:60426:63674:-1 ... [more]
EMLSAG000000091353.803e-929.68supercontig:LSalAtl2s:LSalAtl2s575:133419:152703:-... [more]
back to top
BLAST of glycine cleavage system protein t vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|166221549|sp|A6GXW3.1|GCST_FLAPJ1.842e-6268.42RecName: Full=Aminomethyltransferase; AltName: Ful... [more]
gi|166221559|sp|A6L8T3.1|GCST_PARD81.885e-5056.92RecName: Full=Aminomethyltransferase; AltName: Ful... [more]
gi|166221538|sp|A6L6X5.1|GCST_BACV82.587e-4954.33RecName: Full=Aminomethyltransferase; AltName: Ful... [more]
gi|59797696|sp|Q64WS3.1|GCST_BACFR1.149e-4853.85RecName: Full=Aminomethyltransferase; AltName: Ful... [more]
gi|31340122|sp|Q89YZ6.1|GCST_BACTN5.212e-4854.62RecName: Full=Aminomethyltransferase; AltName: Ful... [more]
gi|59797832|sp|Q7MUG4.1|GCST_PORGI8.370e-4751.54RecName: Full=Aminomethyltransferase; AltName: Ful... [more]
gi|229807551|sp|B2A2T4.1|GCST_NATTJ2.957e-3344.62RecName: Full=Aminomethyltransferase; AltName: Ful... [more]
gi|226711364|sp|B7GH71.1|GCST_ANOFW1.467e-3245.04RecName: Full=Aminomethyltransferase; AltName: Ful... [more]
gi|254797877|sp|B1HSN7.1|GCST_LYSSC2.005e-3245.90RecName: Full=Aminomethyltransferase; AltName: Ful... [more]
gi|229807549|sp|B1YLN6.1|GCST_EXIS22.343e-3244.96RecName: Full=Aminomethyltransferase; AltName: Ful... [more]

Pages

back to top
BLAST of glycine cleavage system protein t vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|495086720|ref|WP_007811543.1|3.192e-7180.00glycine cleavage system aminomethyltransferase Gcv... [more]
gi|1225009642|ref|WP_093024225.1|3.771e-7180.77glycine cleavage system aminomethyltransferase Gcv... [more]
gi|1120556277|ref|WP_073413941.1|4.097e-7181.54glycine cleavage system aminomethyltransferase Gcv... [more]
gi|652138417|ref|WP_026704880.1|6.974e-7180.77glycine cleavage system aminomethyltransferase Gcv... [more]
gi|1275623336|ref|WP_099715708.1|7.774e-7180.77glycine cleavage system aminomethyltransferase Gcv... [more]
gi|1219526088|ref|WP_089479496.1|1.281e-7078.46glycine cleavage system aminomethyltransferase Gcv... [more]
gi|1223453493|ref|WP_091491140.1|1.352e-7081.54glycine cleavage system aminomethyltransferase Gcv... [more]
gi|652312979|ref|WP_026715853.1|1.412e-7083.08glycine cleavage system aminomethyltransferase Gcv... [more]
gi|652332078|ref|WP_026729304.1|1.813e-7080.77glycine cleavage system aminomethyltransferase Gcv... [more]
gi|1223130027|ref|WP_091170524.1|1.914e-7080.77glycine cleavage system aminomethyltransferase Gcv... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1174_size57200supercontigscaffold1174_size57200:8647..9229 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:cytoplasm
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1174_size57200-snap-gene-0.0-mRNA-1maker-scaffold1174_size57200-snap-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1174_size57200:8647..9229-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1174_size57200-snap-gene-0.0 ID=maker-scaffold1174_size57200-snap-gene-0.0|Name=glycine cleavage system protein t|organism=Tigriopus kingsejongensis|type=gene|length=583bp|location=Sequence derived from alignment at scaffold1174_size57200:8647..9229- (Tigriopus kingsejongensis)
TATGAGGGACTAGGAATAGAACACGAAACTGTGAGAAATGATGTGGGTGT
TTTTGATGTATCTCACATGGGAGAATTTTTGTTGACTGGCCCTACTGCCA
TTGATTTAATACAAAAAGTATCTTCAAATGATGCTACAAAACTTACTATT
GGGAAAGCTCAATATAGCTGTTTACCAAACGACCAAGGAGGAATTGTAGA
TGATTTGATTATTTATAAAATAAAAGAAGAACAATATTTACTAGTTGTAA
ACGCTAGCAATATGGAGAAAGATTGGGATTGGATTAGCAAGCACAATACA
ATGGGAGTAGATATGAAAGATTTATCTATGGATTATTCACTACTTGCTAT
TCAAGGGCCAAAAGCAGTGGAAGCTATGCAATCTTTAACAAGTGTTGACT
TGTCTAAAATTCCATTCTACAATTTTGAAGTTTCAGATTTTGCAGGAATT
GAAAATGTGATTATATCTGCTACAGGGTACACTGGATCTGGAGGTTTTGA
AATTTATTGCAAAAACAGTGAAGCAAAACAAGTATGGGATAAAGTATTTG
AAGCTGGAGCTGATTTTGGAATTAAACCAATAG
back to top
Synonyms
The feature 'glycine cleavage system protein t' has the following synonyms
Synonym
Tk10251
Add to Basket