replication protein a 70 kda dna-binding subunit, maker-scaffold11_size778918-snap-gene-6.54 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of replication protein a 70 kda dna-binding subunit vs. L. salmonis genes
Match: EMLSAG00000001089 (supercontig:LSalAtl2s:LSalAtl2s117:781815:785022:1 gene:EMLSAG00000001089 transcript:EMLSAT00000001089 description:"maker-LSalAtl2s117-snap-gene-7.40") HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 314/630 (49.84%), Postives = 420/630 (66.67%), Query Frame = 0 Query: 17 LTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVS------ANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGT-RGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAG 639 LT GALL ICQG ++ PVLQ+LG KK+ SSSDRYR+ +SDG +SNSF+MLATQMN+KI +G L N+ ++ Y+C+N +KVIILL++D+ T E+ +G P +NPDGTV+ + + + D+ P +K++PL P+SSIL P+PV GS + + PI SLTPYQNKWTI+ RVT+KSDIRRW+NSRGEGHLFS D +YYI+ G LKAANKQ++ NN+YE+T +D++EV C D ++P+I+F+FVKI DLA AKDS+VD++GI K NE+ TSQRTQKE KRD+ VD S E N+T+WG A+TF+G+N PVV +K KVSDYNG SLS + SS +Q+NPD+PQAH LKGW+ESEG + SLTQS R N+ GS KT+GEVK N+G +E KP+YYST A I+MFQKD+ALY+ACNR ++G+ CNKKVV+ N YRCEKC MD D F WRI+L+ I DST++ WV CFQE AE IL +A++LG + E YN++F++A FK Y+ R+ CK++ YN E K RHT+ ++ P++Y E N +LI++L++ G Sbjct: 5 LTGGALLSICQGDRVENPVLQILGNKKI--NGSSSDRYRLLISDGDYSNSFAMLATQMNDKIHNGQLENYTVVSVKKYVCNNMQGKKVIILLDIDISTPGAEIGEKLGNPRAINPDGTVNEKPSSSGGNSSSSNQKRYGDDAGLNAPPSKKTPLAPQ--XPPRSSILXPRPVIGSSXXPST--------NIMPINSLTPYQNKWTIQGRVTNKSDIRRWSNSRGEGHLFSFD----------------------------VYYISQGVLKAANKQFNNTNNDYEITLKDTSEVSLCTDADKDVPTISFDFVKIADLAKCAKDSIVDIIGIVKVCNESVQFTSQRTQKEMRKRDLTFVDXSLTEXNVTVWGTMADTFEGSNFPVVAIKGAKVSDYNGXSLSTLISSTVQMNPDIPQAHKLKGWFESEGSNIETTSLTQSQLGRSNNMDSGSEGKTIGEVKYDNLGSSTE-KPDYYSTQALISMFQKDKALYQACNRVSEGRACNKKVVDN-NGSYRCEKCNMDNDEFNWRIILNLLIVDSTDSQWVNCFQESAESILGVSAQDLGHSFQHDEEKYNQIFKEANFKTYNFRIRCKADNYNGESKSRHTIMSLSPVNYEENNNKLIQELKQEG 592
BLAST of replication protein a 70 kda dna-binding subunit vs. L. salmonis genes
Match: EMLSAG00000012025 (supercontig:LSalAtl2s:LSalAtl2s856:330698:332713:-1 gene:EMLSAG00000012025 transcript:EMLSAT00000012025 description:"maker-LSalAtl2s856-augustus-gene-2.33") HSP 1 Score: 200.29 bits (508), Expect = 4.844e-56 Identity = 185/667 (27.74%), Postives = 302/667 (45.28%), Query Frame = 0 Query: 13 SHPSLTEGALLKICQ---GQTI---DKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSNNRKVIILLE---------VDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAA-NKQYSTLNNEYEMTFRDSTEVVPCKD---DAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMS--CN---EVNLTLWGQTAETFDG---ANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSAS---MLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSA-YIAMFQKDRALYKACNRTNDGKQCNKKVVE-----QGNDQ------YRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQA-ELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLE 636 S SLT G + KI + G I ++ +QVLG K + SS +YR+ +SDG S + Q S +L N NN + + N R + ++ V++ P E IG P ++ + + P A + + P +P+ P ++ + K + S + + H I +L P+ NK+ I RVT K +R+W+NSRGEG +F++ L D SGEI AT F E K + + G+ + I+ +KA +++Y++ + YEM + T VVP D D+ IP + + K+ D+A+ + VV+V+GI ++ + + KRD+ L D S CN VN+TLW DG ++ ++N KVSD+ G SLSA S S L +PD+PQA L W+ S QS S SL+Q + + G L E+ + +GK YY SA YI ++D+ ++KAC + C+KKV E DQ Y C C + F WR +L+ +AD + + W T F A ++ A +L + + N +N+ + + +++ K E + +++ + ++ N+RL + E Sbjct: 4 SESSLTPGVVSKILKDGDGDGILSSEEVYVQVLGTKVI---SSEEKKYRLCISDGVHRTSTVLFRPQ------SLTLTN---PPQNNSIINIGNKRSYVEIIRGRTAWFINSFKVISSPSE---QIGSP--------INFSQSIATPEASCDTERKVSIP---NTPVKRPLTDKDXGKLAKRKLNFNSASS----------LSTHEIRNLNPFTNKYKIVCRVTSKGTLRKWSNSRGEGVVFNVTLQDVSGEILATGFNETAKKLFPILVEGKAFCISGAQIKAVKDRRYNSTGHNYEMGLTEHTVVVPVDDSSSDSLKIPKLQIDITKLSDIADKVSNDVVNVVGIVVSFGSIQEISVSQGARTVLKRDMTLRDNSGECNGGSTVNVTLWDAKTNIDDGKIEVEKSIIALRNAKVSDWKGKSLSAGSGSTLIFDPDLPQAKLLYQWWNSSQQSVSNNTFNSLSQDSNKSS--GSTDKYFCLSEIVDEFKNNVDDGKVGYYVLSAVYITEIKRDKLMFKAC------ETCHKKVSETTKNNTNGDQEISEKVYICRSCNTHSNHFIWRYILNVGLADFSGHNWATVFDLVAFKMFGGMHATDLNNIMENNFNEFNQHIHSCQYNRWWLKIKAKVETWQKATRLKLIVIDCEKVNNKSENERLQSETE 626
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|1350579|sp|P27694.2|RFA1_HUMAN (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1; AltName: Full=Single-stranded DNA-binding protein; Contains: RecName: Full=Replication protein A 70 kDa DNA-binding subunit, N-terminally processed) HSP 1 Score: 503.442 bits (1295), Expect = 1.431e-170 Identity = 273/626 (43.61%), Postives = 397/626 (63.42%), Query Frame = 0 Query: 17 LTEGALLKICQ-GQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAGI 640 L+EGA+ I Q G T KP+LQV+ + + +S RYR+ +SDG + S MLATQ+N + L++ C+ + + ++ + + R+V+IL+E++VL V IG P N +G A AP A AA S P P ++ + S G + SGG Q+ V PIASLTPYQ+KWTI ARVT+KS IR W+NSRGEG LFS++L+DESGEIRATAF EQ DK++ +EV ++YY + GTLK ANKQ++ + N+YEMTF + T V+PC+DD ++P++ F+F I DL N +KDS+VD++GICK +AT +T + +E KR+I L+D S V TLWG+ A+ FDG+ PV+ +K +VSD+ G SLS +SSS + NPD+P+A+ L+GW+++EGQ+ +S++ + G GG +N KTL EVK +N+G G KP+Y+S+ A + +K+ +Y+AC T D CNKKV++Q N YRCEKC + F +R++LS +IAD EN WVTCFQE AE IL + A LG L D+N + + +VFQ+A F+ + R+ K E YNDE +++ T+ V P+DY EY +RL+ + + + Sbjct: 5 LSEGAIAAIMQKGDTNIKPILQVINIRPITT-GNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQLSSNCVCQIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYN-EGLGQPQVAPPAPAASPAASSRPQPQNGSSGMGSTVSKAYGASKTFGKAA--GPSLSHTSGG---TQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDH-HLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKS-GGVGGSNTNWKTLYEVKSENLGQGD--KPDYFSSVATVVYLRKENCMYQAC-PTQD---CNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRSAL 615
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|75054872|sp|Q5R7Q4.1|RFA1_PONAB (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1) HSP 1 Score: 499.204 bits (1284), Expect = 6.622e-169 Identity = 272/626 (43.45%), Postives = 395/626 (63.10%), Query Frame = 0 Query: 17 LTEGALLKICQ-GQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAGI 640 L+EGA+ I Q G T KP+LQV+ + + +S RYR+ +SDG + S M ATQ+N + L++ C+ + N ++ + + R+V+IL+E++VL V IG P N +G A AP A AA S P P ++ + S G + SGG Q+ V PIASLTPYQ+KWTI ARVT+KS IR W+NSRGE LFS++L+DESGEIRATAF EQ DK++ +EV ++YY + GTLK ANKQ++ + N+YEMTF + T V+PC+DD ++P++ F+F I DL N +KDS+VD++GICK +AT +T + +E KR+I L+D S V TLWG+ A+ FDG+ PV+ +K +VSD+ G SLS +SSS + NPD+P+A+ L+GW+++EGQ+ +S++ + G GG +N KTL EVK +N+G G KP+Y+S+ A + +K+ +Y+AC T D CNKKV++Q N YRCEKC + F +R++LS +IAD EN WVTCFQE AE IL + A LG L D+N + + +VFQ+A F+ + R+ K E YNDE +++ T+ V P+DY EY +RL+ + + + Sbjct: 5 LSEGAIAAIMQKGDTNIKPILQVINIRPITT-GNSPPRYRLLMSDGLNTLSSFMSATQLNPLVEQEQLSSNCVCQINRFIVNTLKDGRRVVILMELEVLKSAEVVGVKIGNPVPYN-EGLGQPQVAPPAPAASPAASSRPQPQNGTSGAGSTVSKAYGASKTFGKAA--GPSLSHNSGG---TQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEEKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDH-HLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGG-NTNWKTLYEVKSENLGQGD--KPDYFSSVATVVYLRKENCMYQAC-PTQD---CNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRSAL 615
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|75571284|sp|Q5ZJJ2.1|RFA1_CHICK (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1) HSP 1 Score: 493.812 bits (1270), Expect = 7.206e-167 Identity = 267/623 (42.86%), Postives = 383/623 (61.48%), Query Frame = 0 Query: 17 LTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPAS--ESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDG-GIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDL 635 L+EGA+ I QG+ + KPVLQV+ + +A + RYRV +SDG + S MLATQ+N + L+ C+ + N ++ ++ + R+V+IL+++DVL V T+G P N G + + A++ P P + L+ PK + S P+S GG Q+ V PIASL PYQ+KWTI ARVT K IR W+NSRGEG LFS++L+DESGEIRATAF +Q DK++ +E+ ++YY T G LK ANKQY+ + N+YE+TF + T VVPC DDA ++PS+ F+FV I DL N KDS+VDV+GICK + T + + + +E +KR++ L+D S V TLWG AE FDG+ PV+ +K +VSD+ G SLS +SSS + +NPD P+A L+GW++SEGQ S+ S RG G+ +N KTL E K + +G G K +Y+S I +K+ +Y+AC + CNKKV++Q N YRCEKC + F +R++L +IADS + WVTCFQE AE IL ++A LG L D+N + + +VFQ+A F Y+ ++ K E YNDE +++ T V P++Y EY+KRLI + Sbjct: 5 LSEGAIAAIMQGENVYKPVLQVINTRAIAT-GNGPPRYRVLMSDGVNTLSSFMLATQLNPLVEEERLSAHCICQVNRFIVNSLKDGRRVVILMDLDVLKTADMVGGTVGNPVPYN-------EGQGQQRSSAPTANAAPNKPQQQDGNLSVAGSAAPKYHAPSNQFSKASAPSSVKTPGG---TQSKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFNNETSVVPC-DDAQHLPSVQFDFVSISDLENTPKDSIVDVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSGKLVTATLWGNEAEKFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRGWFDSEGQLLECASI--SDVRGGSASGVNTNWKTLYEAKSERLGQGD--KADYFSCVGTIVHLRKENCMYQAC----PSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLDYQWVTCFQESAEFILGQSATFLGELKDKNEQAFEEVFQNANFNTYEFKIRVKLETYNDESRIKATALDVKPVNYREYSKRLIASI 607
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|81879403|sp|Q8VEE4.1|RFA1_MOUSE (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1) HSP 1 Score: 491.886 bits (1265), Expect = 6.755e-166 Identity = 266/629 (42.29%), Postives = 398/629 (63.28%), Query Frame = 0 Query: 17 LTEGAL-LKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPD-GTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSP--NGNRPKSSILDPKPV---YGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 L+EGA+ + I Q T KP+LQV+ + ++ + S RYR+ +SDG + S MLATQ+N + G LA+ C+ + + ++ + + RKV++L++++V+ +V IG P N G ++ A + S TPP +K P G+ + KP G+ SGG Q+ V PIASLTPYQ+KWTI ARVT+KS IR W+NSRGEG LFS++L+DESGEIRATAF EQ DK++ +EV ++YY + G LK ANKQ+S + N+YEMTF + T V+PC +D ++P++ F+F I DL + AKD++VD++GICK ++ +T + +E KR+I L+DMS V TLWG+ A+ FDG+ PV+ +K +VSD+ G SLS +SSS + +NPD+P+A+ L+GW++SEGQ+ +S++ + G GG +N KTL E K +N+G G K +Y+ST A + +K+ +Y+AC T D CNKKV++Q N YRCEKC + F +R++LS +IAD EN WVTCFQE AE IL + LG L ++N + + +VFQ+A F+ + R+ K E YNDE +++ T+ V P+D+ +Y +RLI ++ + Sbjct: 5 LSEGAIEVMIQQENTSIKPILQVINIRPIST-GNRSPRYRLLMSDGLNTLSSFMLATQLNTLVEGGQLASNCVCQVHKFIVNTLKDGRKVVVLMDLEVMKSAEDVGLKIGNPVPYNEGYGQQQQQQQQQQQQAVPSPASAATPPASKPQPQNGSLGMGSTAAKAYGASKPFGKPAGTGLLQPSGG---TQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGALKIANKQFSAVKNDYEMTFNNETSVLPC-EDGHHLPTVQFDFTGIGDLESKAKDALVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTTLWGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSISDHRSGGAGGG-NTNWKTLHEAKSENLGQGD--KADYFSTVAAVVFLRKENCMYQAC-PTQD---CNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAILGQNTMYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDFRDYGRRLIANIRK 621
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|2498844|sp|Q24492.1|RFA1_DROME (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1; AltName: Full=Single-stranded DNA-binding protein; Short=DmRPA1) HSP 1 Score: 489.96 bits (1260), Expect = 1.840e-165 Identity = 263/634 (41.48%), Postives = 388/634 (61.20%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCS----NSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKD-DAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYN-GVSLSAVSSSVLQINPDMPQAHALKGWYESEG--QSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 M SL+ G + +I G+ +D PVLQ+L KK+ N ++ S+RYR+ +SDG++ NS++MLA+Q+N +G L F +++ + Y+ S + ++V+I+ E+ V+ EV IGEP T N AK+ K A S+ + P+AK+ P S + V S S HPI+SL+PYQNKW IKARVT KS IR W+N+RGEG LFSMDL+DESGEIRATAFKEQCDK+Y+ ++V +YYI+ LK ANKQYS+LNN YEMTF T V C+D D IP I +N V I D++ + VD +GICKE E + ++ T KEF KRDI LVDMS + ++LTLWG A FDG PV++VK +++++N G SLS S+++INPD+P+AH L+GW+++ G A+M+S R G + TL + + +N+G G KP+Y+ A + + +++ A Y+AC +++ CNKKVV++GNDQ+RCEKC F +R++++ SI D T N WV+ F E E +L T++E+G + +P ++F F + +L CK+E Y D + + T+++V PI++ EYNK L+K+L+E Sbjct: 1 MVLASLSTGVIARIMHGEVVDAPVLQILAIKKI-NSAADSERYRILISDGKYFNSYAMLASQLNVMQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYE-------NAAKQDLAPKPAVTSN-SKPIAKKEP----------SHNNNNNIVMNSSINS---------GMTHPISSLSPYQNKWVIKARVTSKSGIRTWSNARGEGKLFSMDLMDESGEIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNLVPISDVSGMENKAAVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHVQPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDSVANMVS-----ARTGGGSFSTEWMTLKDARARNLGSGD--KPDYFQCKAVVHIVKQENAFYRACPQSD----CNKKVVDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEALENDPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHLLKELQE 595
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|82185887|sp|Q6NY74.1|RFA1_DANRE (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1) HSP 1 Score: 481.1 bits (1237), Expect = 4.924e-162 Identity = 252/627 (40.19%), Postives = 385/627 (61.40%), Query Frame = 0 Query: 17 LTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCL-IRANNYMCSNSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGN-----RPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 L+EGA+ + +G ++ P+LQ + +K+ + S R+RV +SDG + S ML+TQ+N LA C+ + + + R+V+++L+++VL ++ IG+PT G KAP T P PL NG+ RP + KP+ + P + G + V PIASL PYQ+KWTI+ARVT+KS IR W+NSRG+G LFSM+L+DESGEIRAT F + DK+++ +E G+++YI+ GTLK ANKQ+S+L N+YEMT T ++PC +D+ ++P + +FV I DL + KD+++DV+G+CK + + ++ + +E +KR+I+L+DMS + LT+WG AETFDG+ P++ +K ++SD+ G SLS + SS + INPD+P+A+ L+GWY+ EG + S+T+ RG GG +N KTL EVK +++G G K +Y+S A I +K+ LY+AC K CNKKVV+Q N +RCEKC + F +R++LS +IAD +N WVTCFQ+ AE +L + + LG L D N +++VFQ A F + R K E YNDE +++ T+ P+D+ EY+KRLI ++ + Sbjct: 5 LSEGAIESLSKGTEVNNPILQCVNIRKIDGGNGVS-RFRVMMSDGLHTMSSFMLSTQLNPMAEQNQLATNCVCVLKRSVTNVLKDGRRVVVILDIEVLKSADQMPGKIGDPTPY-------VEGQSKAPS---------TAPAPTARPLQPQNGSDGSTYRPSAQSFGKKPM--AAPNTPGG-----SSKVVPIASLNPYQSKWTIRARVTNKSAIRTWSNSRGDGKLFSMELVDESGEIRATGFNNEVDKFFSLIEQGKVFYISKGTLKIANKQFSSLKNDYEMTLNGETSIIPC-EDSNDVPMLQCDFVSIADLESREKDTILDVIGVCKNAEDVARIMTKNS-REVSKRNIQLIDMSGRVIQLTMWGSDAETFDGSGQPILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEGHALDGQSMTE--LRGPGGGGNTNWKTLAEVKNEHLGHGD--KADYFSCIATIVYIRKENCLYQAC----PSKDCNKKVVDQQNGMFRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQDTAETLLGQNSSYLGQLKDTNEAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVDAKPVDHREYSKRLIINIRK 597
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|82194954|sp|Q5FW17.1|RFA1_XENTR (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1) HSP 1 Score: 478.789 bits (1231), Expect = 4.763e-161 Identity = 266/630 (42.22%), Postives = 395/630 (62.70%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLN---PDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 M+ P L+EGA+ I G + KP LQV+ + + N + RYR+ +SDG + S MLATQ+N + + LA C+ + + ++ +N + R+VII++E++VL V IG P N +A APP + + PP P+ NR S + G + GG Q+ V PIASL PYQ+KWT++ARVT+K IR W+NSRGEG LFS++++DESGEIRATAF EQ DK+++ +EV ++YY + GTLK ANKQY+++ N+YEMTF T V+PC DD+ ++P + F FV I +L + KD+V+D++GICK E T +T + +E +KR+I L+D S V+ TLWG+ A+ FDG+ PVV +K ++SD+ G SLS +SSS + INPD+P+A L+ W++SEGQ S+++S RG GG +N K+L EVK +N+G G K +Y+++ A I +K+ LY+AC + CNKKV++Q N +RCEKC + + +R++LS +IAD EN W+TCFQE AE IL + A LG L ++N + Y++VFQ+A F+ Y R+ K E YNDE +++ T V P+D+ EY++RLI ++ + Sbjct: 1 MALPVLSEGAISAILGGDSSCKPTLQVINIRSI-NTGNGPPRYRLLMSDGLNTLSSFMLATQLNFLVDNNLLATNCICQVSRFIVNNLKDGRRVIIVMEMEVLKSADLVKGKIGNPHPYNDGQGPPQPAAPAPASAPPPSKPQNISAPPP---------PSMNRGASKLFG-----GGSVVNTPGG---SQSKVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNEQADKFFSLIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSVIPC-DDSADVPMVQFEFVPIGELESKNKDTVLDIIGICKNAEEVTKVTIRSNNREVSKRNINLMDSSGKVVSTTLWGEDADKFDGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEGQVVEGTSISES--RGGTGGGNTNWKSLLEVKTENLGHGE--KADYFTSVATIVYLRKENCLYQAC----PSQDCNKKVIDQQNGLFRCEKCDKEFPNYKYRLILSANIADFGENQWITCFQESAESILGQNATYLGELKEKNEQAYDEVFQNANFRSYTFRIRVKLETYNDESRIKATAMDVKPVDHKEYSRRLIMNIRK 603
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|400975|sp|Q01588.1|RFA1_XENLA (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1; AltName: Full=Single-stranded DNA-binding protein) HSP 1 Score: 476.863 bits (1226), Expect = 2.631e-160 Identity = 265/630 (42.06%), Postives = 391/630 (62.06%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAA---DSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 M+ P L+EGA+ + G + KP LQV+ + + N + RYR+ +SDG + S MLATQ+N + + LA C+ + + ++ +N + R+VII++E+DVL V IG P N DG A A ++ PP P+ NR S + G + GG Q+ V PIASL PYQ+KWT++ARVT+K IR W+NSRGEG LFS++++DESGEIRATAF EQ DK+++ +EV ++YY + GTLK ANKQY+++ N+YEMTF T V+PC DD+ ++P + F FV I +L + KD+V+D++G+CK E T +T + +E +KR I L+D S V+ TLWG+ A+ FDG+ PVV +K ++SD+ G SLS +SSS + INPD+P+A L+ W++SEGQ S+++S G GG +N K+L EVK +N+G G K +Y+++ A I +K+ LY+AC + CNKKV++Q N +RCEKC + F +R++LS +IAD EN W+TCFQE AE IL + A LG L ++N + Y++VFQ+A F+ Y R K E YNDE +++ T V P+D+ EY++RLI ++ + Sbjct: 1 MALPQLSEGAISAMLGGDSSCKPTLQVINIRPI-NTGNGPPRYRLLMSDGLNTLSSFMLATQLNSLVDNNLLATNCICQVSRFIVNNLKDGRRVIIVMELDVLKSADLVMGKIGNPQPYN-DGQPQPAAPAPASAPAPAPSKLQNNSAPP---------PSMNRGTSKLFG-----GGSLLNTPGG---SQSKVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNEQADKFFSIIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSVIPC-DDSADVPMVQFEFVSIGELESKNKDTVLDIIGVCKNVEEVTKVTIKSNNREVSKRSIHLMDSSGKVVSTTLWGEDADKFDGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEGQVVEGTSISES-RGGGTGGGNTNWKSLLEVKNENLGHGE--KADYFTSVATIVYLRKENCLYQAC----PSQDCNKKVIDQQNGLFRCEKCNKEFPNFKYRLILSANIADFGENQWITCFQESAESILGQNATYLGELKEKNEQAYDEVFQNANFRSYTFRARVKLETYNDESRIKATAVDVKPVDHKEYSRRLIMNIRK 603
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|2498845|sp|Q92372.1|RFA1_SCHPO (RecName: Full=Replication factor A protein 1; AltName: Full=Single-stranded DNA-binding protein p68 subunit) HSP 1 Score: 368.237 bits (944), Expect = 4.132e-118 Identity = 209/612 (34.15%), Postives = 343/612 (56.05%), Query Frame = 0 Query: 34 PVLQVLGFKKLANQSSSS--DRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSA-----SMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEA 638 P+LQVL K+L + +S RYRV +SD + + SML+TQ+N + L ++ + + RK++I+L ++VLT+ G V IG NP G + + ++ + A + P + S GN ++ P P+ A S + ++PI L+PYQNKWTI+ARVT+KS+++ W+N RGEG LFS++LLDESGEIRAT F +Q D +Y+ ++ G +YYI+ + A KQY+ + NEYE+ F TE+ +D +P F+FV ++++ + AKD+V+DV+G+ + +TS+ T + F KRDI +VD + E+ +TLWG+TA F + ++ K KV+D+ G SLS ++SS + ++PD+ ++H LKGWY+ +G+ S++S T S T G + K + EV+ +++GM P+Y+S I +K Y AC CNKKV +QG +RCEKC + D +R +++ ++ D T W+ F + +LI++KTA+EL L + + + +A + Y + K + + E +VR+T+ ++ +D+ E +KRLI +E A Sbjct: 25 PILQVLTVKELNSNPTSGAPKRYRVVLSDS-INYAQSMLSTQLNHLVAENKLQKGAFVQLTQFTVNVMKERKILIVLGLNVLTELG-VMDKIG-----NPAGLETVDALRQQQNEQNNASA---PRTGISTSTNSFYGNNAAATAPAPPPMMKKPAAPNS-----LSTIIYPIEGLSPYQNKWTIRARVTNKSEVKHWHNQRGEGKLFSVNLLDESGEIRATGFNDQVDAFYDILQEGSVYYISRCRVNIAKKQYTNVQNEYELMFERDTEIRKAEDQTA-VPVAKFSFVSLQEVGDVAKDAVIDVIGVLQNVGPVQQITSRATSRGFDKRDITIVDQTGYEMRVTLWGKTAIEFSVSEESILAFKGVKVNDFQGRSLSMLTSSTMSVDPDIQESHLLKGWYDGQGRGQEFAKHSVISSTLSTT-----GRSAERKNIAEVQAEHLGMSE--TPDYFSLKGTIVYIRKKNVSYPAC----PAADCNKKVFDQGGS-WRCEKCNKEYDAPQYRYIITIAVGDHTGQLWLNVFDDVGKLIMHKTADELNDLQENDENAFMNCMAEACYMPYIFQCRAKQDNFKGEMRVRYTVMSINQMDWKEESKRLINFIESA 608
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|75337354|sp|Q9SKI4.1|RFA1A_ARATH (RecName: Full=Replication protein A 70 kDa DNA-binding subunit A; Short=AtRPA70A; AltName: Full=AtRPA1-3; AltName: Full=Replication factor A protein 1A; AltName: Full=Replication protein A 1A; Short=AtRPA1A) HSP 1 Score: 363.999 bits (933), Expect = 4.499e-116 Identity = 219/642 (34.11%), Postives = 344/642 (53.58%), Query Frame = 0 Query: 16 SLTEGALLKICQGQTIDKPVLQVLGFKKLA-NQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSA---NGAKKAPPAKRAADSDPTPPMA-KRSPLTSPN----GNRPKSSILDPKPVYGSHPASESGGFDPMQ-----ATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLD-ESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWG--------QTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALH--DQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLI 632 SLT A+ I G KP+LQVL K + +Q S +RYR +SDG S +M+A Q+N+++ SG +++ +Y+CS+ RK+I++L ++ + Q E TIG PT T + +G PP R ++P + R+P N N S +P Y P + P+ A V PIA+L PYQ +W IKARVT K DIRR+NN++G+G +FS DLLD + GEIR T F D++Y+ EVG++Y I+ G+LK A K ++ L NE+E+ ++ V C D+ +IP F+F I D+ NA ++++DV+G+ N + + ++ E +R + L D S V +TLWG Q E D A +PV+ +K KVSD++G S+ +SS+ L INPD P+AH L+ W++ G+ + S+++ GG+ N +I+ G+G KP++ + A I+ + D Y AC KQCNKKV G +++ C++C + D +R +L I D T TW+T FQE E I+ A++L A+ + E + ++ +D F Y ++L K E Y DEQ+V+ T+ V ++Y +K ++ Sbjct: 4 SLTPNAITAIHDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDG-VSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSE---TIGNPTIFGETDTEAQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSY--QPPASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPIL-RKNGMETHRRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRDTM---PGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYML 635
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|1022759816|gb|KZS06135.1| (Replication protein A 70 kDa DNA-binding subunit [Daphnia magna]) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 291/641 (45.40%), Postives = 407/641 (63.49%), Query Frame = 0 Query: 13 SHPSLTEGALLKIC-QGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMC--------SNSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQA----TVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAGI 640 + P LT GA+ I G + PVLQVLG+K L Q S+DRYR+ +SDG++S ++ MLATQ+N I G L F +I+ ++ + + +K+IILL+V+ + E+ IG P TLN G VS + + PA N KS+ PA+++GG+ A HPI SLTPYQNKWTIK RVT+KSDIR W+NSRGEG LFSMD++DE+GEIRATAF +CDK+Y+ +E+ ++YYI+ LKAANKQY+++ N+YEMTF +T V+PC DD NIPSITFNFV I L N KDS++D++G+ K N+ + S+ T KE R++++VD + EVNLTLWG+T E FD ++ PVV +K K+SD+ G SL +SS+V+QINPDM +AH L+GWY++ G S+ + S++ + RG+ G KT E K +N+G G KP+YY+ A +AM K+RALY AC + CNKKV++Q N YRCEKC + F WR++LS +IAD+TE WVTCFQE AE +L K+A+E+G L D + + K+F++ATFK Y RL K E YNDE +++ + V ++Y E+N+RLI++L+E I Sbjct: 5 NQPKLTSGAIQAIIGNGLYGETPVLQVLGYKNL--QGESNDRYRILISDGKYSYAYGMLATQLNHLITEGKLEIFTIIKVTKFVVNKVATKATAGKDQKKIIILLDVEPIVPGSEIGEKIGNPQTLNDVGEVSEDATVNSKPAGSM--------------------NYSKSA-----------PANKTGGYGQQAAKPDIITHPIVSLTPYQNKWTIKVRVTNKSDIRTWSNSRGEGKLFSMDMMDETGEIRATAFNAECDKFYHMIEIDKVYYISQAQLKAANKQYTSIKNDYEMTFSQNTTVIPCHDDTSNIPSITFNFVPINQLINLEKDSIIDIIGVVKSANDVRVILSKTTNKELRMREVQMVDSTNTEVNLTLWGKTGEEFDASSQPVVALKGVKLSDFGGRSLGTISSTVIQINPDMAEAHKLRGWYDNGGSSSVISSISSA--RGSGTGGSGLYKTFAEAKFENLGGGE--KPDYYNVKAMVAMINKERALYMAC----PSEDCNKKVIDQNNGLYRCEKCQREFQDFKWRMMLSVNIADATEQQWVTCFQETAETLLGKSADEIGRLKDTDNAEFQKIFEEATFKWYVFRLRVKMEMYNDENRLKTNVYEVKEVNYKEHNERLIRELKEMAI 604
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|1227955335|ref|XP_021932169.1| (replication protein A 70 kDa DNA-binding subunit [Zootermopsis nevadensis] >gi|646724057|gb|KDR24447.1| Replication protein A 70 kDa DNA-binding subunit [Zootermopsis nevadensis]) HSP 1 Score: 532.717 bits (1371), Expect = 1.010e-179 Identity = 276/635 (43.46%), Postives = 408/635 (64.25%), Query Frame = 0 Query: 17 LTEGALLKICQGQTIDKPVLQVLGFKKLANQSSS--SDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNY---MCSNSN--NRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDY-NGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSL-TQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGAL-HDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE-AGI 640 L+EGAL I G +D PV+Q+LG KK+A SS+ SDR+R+ VSDG+ NSF+MLATQ+N+K+ SG L++F +I+ Y M +NS+ +++V+++L+V +L EV IG P + V G K+ PP++ P+ RS N + P +L S P S HPI+SL+PYQNKW IKARVT KS +R W N+RGEG LFS+DL+DESGEIRATAFKEQCDK+Y+ +EV ++Y I+ TLK ANK+++ + N+YEMTF + T+++PC +D +IPS+T+NF+ I LA +++VD++G+CK + E +L S+ T +E KRD+ LVD S V+LTLWG AE FDG+ PV+ +KN +++++ G S+S + SSV QINPD+ +AH L+GW+++ G + SL +++G G G + SN T EV+ +G G KP+Y+++ A + + + + +LYKAC +CNKKV++Q N YRCEKC + F +R++LS S+ D + N WVTCFQE AE++L T++E+G + HD + + +VF A FK Y RL K E YNDE +++ T+ P++ EYN RLI +++E AG+ Sbjct: 5 LSEGALSVILAGGNVDDPVMQILGHKKIAGTSSTTGSDRFRLLVSDGRHLNSFAMLATQLNDKVTSGELSDFTVIQITRYITSMVTNSDKGDKRVMVILDVKILALGTEVGFKIGNPKPITEGTEVETGGLKQPPPSR---------PVQPRSSTNLVNSSAP---VL-------SSPGS--------SVNTHPISSLSPYQNKWVIKARVTSKSPVRTWANARGEGKLFSIDLVDESGEIRATAFKEQCDKFYDMIEVNKVYLISRCTLKTANKKFTNIKNDYEMTFTNDTQMIPCHEDTTDIPSLTYNFIPINTLAGLETNALVDLIGVCKSSGEVQSLISRNTNRELKKRDVTLVDESNTSVSLTLWGNQAEEFDGSLQPVLAIKNGRINEFGGGKSVSLMQSSVFQINPDITEAHKLRGWFDNVGSTQEQESLSSRTGMAG--GALSSNWMTFKEVQENQLGCGE--KPDYFTSVATVLLVRSENSLYKACPTA----ECNKKVIDQNNGMYRCEKCNREYPNFKYRLLLSVSLGDLSGNQWVTCFQEVAEVVLGTTSQEIGDMFHDD--KQFREVFYKAAFKTYTFRLRAKMENYNDENRLKVTVVDAKPLNVQEYNARLITEIKEMAGV 602
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|443719869|gb|ELU09821.1| (hypothetical protein CAPTEDRAFT_172916 [Capitella teleta]) HSP 1 Score: 528.094 bits (1359), Expect = 7.113e-178 Identity = 270/630 (42.86%), Postives = 406/630 (64.44%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSN-NRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILD---PKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 MS+ +LT GA+ I G ++ P+LQ L +KK+++Q + DR+R+ +SDG S+S +MLATQ+N+K+ +G L +I+ + Y+C+ N NR+V+ILLE+ V+ + +V +G PT K +K A P + S +++ N+P++S + KP + P+ G P++ VHPI+SL PYQN+WTIK RVT KS IR W+NSRGEG LFSM +D+SGEI+ATAFK+Q DK+Y+ +E+ +++++ GTLK A+K+Y+T +N+YEMTF + TE++PC DD ++P+I FNFV+I +L + +S VDV+G+ K E +T+T+++T KE KR+++LVD V LTLWG AE F+ NNPVV KN +VSD+ G SLS SSS L +NPD+PQAH L+GWY+SEG++A + S G +N K+ G+VK QN+G G +G +Y++ I +K+ +Y AC + + CNKKVV+Q N YRCEKC + F WR++LS ++AD ++N WVTCFQE AE +L +A+ELG L +N ++KVF ++ FK Y M L K E YN+E +++ P+ +Y+K+LI ++E+ Sbjct: 1 MSY-NLTAGAIEDIMGGSKVESPILQCLDWKKISSQQGA-DRFRLLLSDGVCSHSSAMLATQLNDKVTNGELEPNSVIKLDKYLCNTINGNRRVMILLEITVIAKGAQVGSRLGNPTPY------------KLGESKEAKVEQPVAKPVQNS-ISNNQQNKPQNSFYNNSSSKPFVAAQPSINGPGDSPVR--VHPISSLNPYQNRWTIKVRVTSKSQIRTWSNSRGEGKLFSMTFMDDSGEIKATAFKDQVDKFYDMIEMNKVFFVKKGTLKTADKRYNTTDNDYEMTFNNDTEIIPCDDDT-SLPTINFNFVEIGNLQSVEPNSNVDVLGVVKSVAEVSTITTKQTNKELKKRELELVDRGQVLVRLTLWGLEAENFNSMNNPVVAAKNVRVSDFGGRSLSCGSSSQLVLNPDIPQAHQLRGWYDSEGRNADFNAY--SSEAAGSGSHSTNWKSFGDVKSQNLGTGEKG--DYFTAKGTIVYLRKENCMYMACPQAD----CNKKVVDQANGYYRCEKCQKEFPNFKWRMILSANVADFSDNQWVTCFQESAENVLGISADELGKLRSENEAAFDKVFDESVFKSYVMTLRAKMETYNEETRLKVICLKATPVVAEDYHKKLISEIEQ 604
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|1229182951|ref|XP_022105118.1| (replication protein A 70 kDa DNA-binding subunit-like isoform X3 [Acanthaster planci]) HSP 1 Score: 525.783 bits (1353), Expect = 1.188e-176 Identity = 278/632 (43.99%), Postives = 394/632 (62.34%), Query Frame = 0 Query: 17 LTEGALLKICQGQTIDKPVLQVLGFKKL---ANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPP--------AKRAADSDPTPPMAKRSPLTSPNGNR-PKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDL 635 L+ GAL I G IDKPV Q+L KKL A ++S DRYR+ +SDG +N+ +MLA Q+N+ + G L +I + Y+C+ NR+V+I+LE+ V G+V IG P L G ANG + P A RA S + A P N +R P+ S P P G P QA PI+SLTPYQN+WTIKARV+ KS +R W+NSRGEG LFSMDL D+SGEIRATAFK+QCDK+++ +EVG++Y+ + GTLK AN+QY+++ N+YEMTF + T VVPC+++ +IP++ F+F I L KD+++DV+G+ K T + T+T++ T +E TKR+++++D S V LTLWG AE FDG NNPV+ VK ++SD+ G SLS + SS + INPD+P+AH LKGWY+S G + S+++ G G SN TL EV QN+G G KP+Y++T I +K+ ++Y AC + +CNKKV + G+ Y CEKCG D F R++LS +IAD+T+ W T FQE AE IL A++LG L ++ + Y+ VF+ A F+ + R+ K E YN+E +++ T +V PID E +K+LI D+ Sbjct: 5 LSSGALEAINDGAQIDKPVFQLLALKKLNPTAATNNSVDRYRILLSDGVHNNT-AMLAVQLNQMVTDGQLEPNTVICLDRYVCNKLPGNRRVVIILELTVAAPAGQVGGKIGNPVALPLGGATGANGQQAPAPQRPLQQQQAMRAGASPMSVAKANSFPGAGSNFSRQPQGSFGGPGPSSGMMSP-------PKQA--QPISSLTPYQNRWTIKARVSSKSAVRTWSNSRGEGKLFSMDLCDQSGEIRATAFKDQCDKFFDLIEVGKVYFFSRGTLKTANRQYTSITNDYEMTFNNDTTVVPCEEEDDSIPTMQFDFRSINQLEEMNKDAILDVIGVVKSTGDVATITTKTTNRELTKRELQVMDDSNKVVTLTLWGNEAEKFDGTNNPVIAVKGARLSDFGGRSLSVLMSSTVLINPDIPRAHQLKGWYDSVGHTQEAQSISEQ-RMGAGVGASSNWLTLEEVYAQNLGQGE--KPDYFTTKGTIIFMRKENSMYMACPSS----ECNKKVSDNGDGSYHCEKCGKDYPNFQHRLLLSANIADATDTQWTTFFQETAESILGMKADDLGRLKMEDEQSYSHVFEKACFESFIFRMRIKMESYNEEARLKCTCMSVKPIDVKEQSKKLIMDI 619
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|762110343|ref|XP_011437862.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform X2 [Crassostrea gigas]) HSP 1 Score: 522.702 bits (1345), Expect = 1.362e-175 Identity = 271/630 (43.02%), Postives = 396/630 (62.86%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNP---DGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 MS+P+L+ GAL I GQ DKPVLQV+ KK+ Q SS+DRYR+ +SDG+ S S +MLATQ+N ++ G L N +I+ + Y+C+ +R+V+ILL++ VL + EV IG P GT + + + + PP + + S N + ++ + K Y S + SGG + VH I SLTPYQN+W I+ARVT KS IR W+NSRGEG LFS+ L D+S EIRAT F + DK+Y +EV ++YY + TLK ANKQY+T+ N+YEMTF T + PC DD+ ++P++ FNFVKI +L + A S++DV+G+ K + TT+ +++QKE TKRD+++VD S VNLTLWG A+ FDG+ +PV+ VK KVSDY G SLSA++SS + NPD+ + H LKGW+E +G + ++ G GG +N K E+K +N+G KPEY++T A + +K+ +Y+AC + CNKKVV+QGN YRCEKC + + WR++LS ++ D ++N WVTCFQE AE +L A++LGAL D N + +++VF +A FK Y + K E YNDE +++ ID+ E ++RLI+++++ Sbjct: 1 MSNPTLSSGALEAIINGQNFDKPVLQVISSKKITAQGSSADRYRLLLSDGEVSYSHAMLATQLNS-LMDGELDNLAVIQVDKYLCNTIQGDRRVMILLDLHVLQRGSEVGQRIGNPQQYKAAATQGTTAEHNSAQCPPQMPKQEGGGQSFIGTVSDKQVNNNIKKENMNGNSKGGY-SLKTNNSGGTPGGTSRVHKIDSLTPYQNRWKIRARVTQKSGIRTWSNSRGEGKLFSVTLTDDSAEIRATGFNDAVDKFYELLEVNKVYYFSKATLKTANKQYTTVQNDYEMTFNPDTIIEPCDDDS-SLPTMNFNFVKINELESKAPTSLIDVIGVVKNCGDVTTIIGKQSQKEITKRDLQIVDQSGMSVNLTLWGADAQQFDGSGHPVIAVKGAKVSDYGGRSLSAMASSQIIHNPDLREGHMLKGWFEHDGHNMDFHGY-KNDGMGGGGGGSTNWKCFAEIKSENIGA---DKPEYFTTKATVLFLRKENCMYQACPT----ESCNKKVVDQGNGMYRCEKCAREFPNYKWRMILSANLGDYSDNQWVTCFQESAEAMLGIKADDLGALKDSNEQAFDQVFTEACFKSYIFKFRAKVETYNDESRLKTVTMNASTIDFKEQSQRLIEEIKK 619
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|1316146081|ref|XP_023218106.1| (replication protein A 70 kDa DNA-binding subunit-like [Centruroides sculpturatus]) HSP 1 Score: 520.005 bits (1338), Expect = 7.152e-175 Identity = 264/606 (43.56%), Postives = 381/606 (62.87%), Query Frame = 0 Query: 38 VLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSN-NRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAGIDL 642 V G+KK+ +++++RYR+ V DG S+ F+MLATQ+N+KI+ G L + +IR + Y+C+ ++KV+ILLE+ VL +V IG N A+ RA +++ R+ S N + YG G VHPI+SLTPYQN+WTI+ARVT+K++IR W+NSRGEG LFS+DLLDESGEIRATAF EQCDK+++ ++V ++YYI+ +LK ANK ++++ N+YEM+F T VV C D++ +IP + F FV I L N KD VDV+G+CK ++ T+TS+ T KEF KRD+ LVD S EV+LTLWG AE FD ++NP++ VK +VSD+ G SLS +S+S+LQINPD+ +AH L+GWY+ EG + TQS + G +G KT + K + +GS KPEYY T A I M ++D+ +Y AC G QCNK+V++ N YRCEKC + F WR++LS S+AD +EN WVTCFQ+ AE +L T+EELG L + + E + +V DA FK + RL K E +N+E +++ T+ P++ EY +L+ D+++ + L Sbjct: 10 VKGYKKIPG-NANNERYRLLVHDGCISHPFAMLATQLNDKIVKGELERYTVIRLDKYLCNQVQPDKKVLILLEITVLVPGVDVGEKIGASIQSIATSNELQNVAQGNSSNFRAQNTNIGMVTKIRTEPGSTNWSGG----------YGQRNQQYGGA---TSVIVHPISSLTPYQNRWTIRARVTNKTNIRTWSNSRGEGKLFSVDLLDESGEIRATAFNEQCDKFFDAMDVNKVYYISKASLKTANKNFTSIKNDYEMSFTSETTVVLCTDNSNSIPMVQFQFVPIDQLQNVEKDKFVDVIGVCKNASDVQTITSRNTNKEFKKRDVHLVDKSGVEVSLTLWGADAEKFDSSDNPIIAVKGVRVSDFGGKSLSMISASLLQINPDIREAHILRGWYDREGAHIT----TQSLSNQTSGSLGGTWKTFAQAKAEM--LGSSDKPEYYITKATIVMVKRDKCMYMAC----PGDQCNKQVIDMNNGLYRCEKCSREYTSFKWRLLLSVSLADFSENQWVTCFQDVAEKMLGITSEELGTLKETDEEKFKEVLIDANFKSFIFRLRTKLETFNEETRLKTTVMQATPVNCQEYASKLLSDIKQMELVL 591
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|1126159812|ref|XP_019621789.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit-like isoform X1 [Branchiostoma belcheri]) HSP 1 Score: 520.39 bits (1339), Expect = 1.598e-174 Identity = 273/642 (42.52%), Postives = 403/642 (62.77%), Query Frame = 0 Query: 16 SLTEGALLKICQGQTIDKPVLQVLGFKKLANQSS-SSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDG----TVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNG--NRPKSSILDPKPVYGSHPAS-------ESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIG--SNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAGI 640 +L EG + +I G + PVLQVLG KK+ + + S+RYR+ +SDG+ + S +MLATQ N + SG L C+IR Y+C+ +NR+V+I+LEV VL P I PT +N G + N + + +R S P P + + NG NRP + +P G AS + P + PIA L PYQN+WTI+ARVT+K IR W+N+RGEG LFSMDLLDESGEIRATAF +QCDK+Y+ +E+G++Y+I+ G LK ANKQY+++ N+YEM+F + T VV C+D++ ++PSIT+NFV I+ L ++++D++G+CK + TT+T+++T +E KRD+++VDMS +VNLTLWG A+ FDG++ PVV +K ++SD+ G SLS V SS + INPD+P+A L+GWY+ G + S QS + G GG G +N K+ +V +N+G G KP+Y+ST I +K+ A+Y+AC T D CNKKVV+ N + CEKC + F +R++L ++AD + N W TCF EQAE IL + E LG + DQ+ G+++VF +A FK Y + K + YNDE ++R + P+D+ EY+K+LI ++ + + Sbjct: 4 NLNEGTIQEIANGGSPKSPVLQVLGIKKIQSAGAQGSERYRLLLSDGKHTQSSAMLATQQNHLVNSGQLEQHCVIRLEKYICNTIQDNRRVLIMLEVQVLGNP---KIKIKNPTPVNQAGGGAPAPAQNASFGSSYGRRPLTSVPQPSFYRGGSSHAVNGGMNRPGNQGGAGRPNQGGSGASFYPRSNVAASPGTPGRGKPTPIAGLNPYQNRWTIRARVTNKGSIRTWSNARGEGKLFSMDLLDESGEIRATAFNDQCDKFYDLIEIGKVYFISKGGLKTANKQYTSIQNDYEMSFNNDTTVVLCEDES-DLPSITYNFVPIEKLEEMNPNTIIDLIGVCKSYGDVTTITTRQTNREVNKRDLQIVDMSGKQVNLTLWGGEADKFDGSSCPVVAIKGARLSDFGGRSLSTVGSSTVMINPDIPEAFQLRGWYDKVGCN----SEAQSISTGAGGGAGRPTNWKSFKQVIDENLGTGE--KPDYFSTKGTIVFMKKESAMYQAC-PTQD---CNKKVVDLQNGFFSCEKCSKEFPNFKYRLILQANVADYSGNQWTTCFSEQAETILEQNTEYLGNMKDQDDTGFDQVFTEANFKSYIFTMRVKMDTYNDESRIRCSCVGAQPVDFKEYSKKLINEIRQMAL 631
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|524909293|ref|XP_005109695.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit-like [Aplysia californica]) HSP 1 Score: 519.62 bits (1337), Expect = 1.678e-174 Identity = 259/624 (41.51%), Postives = 396/624 (63.46%), Query Frame = 0 Query: 17 LTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAGI 640 L+ G LL+I G T +KPVLQV+ KK+ ++ DRYR+ +SDG + S +MLA QMN+ + + L ++ +I YMC+ ++VIILL++ V+T +V IG P L P+ P + D+D + P A + + + K++ + V ++ ++ + P +A +H IASLTPYQN+W I+ARVTHKS++R W+NSRGEG LF+++LLD+SGEIR T F +Q DKY++ +EV ++YY + TLK ANKQYSTL N+YEMT T + PC DD ++P +TF+FVKI DL +S +DV+GI K N+ T+ +++QKE TKRD+++VD S VNLTLWG+ A FDG PVV VK +VSD++G SLS +S + +NPD+ ++H L+GW+ESEG+ S + G G+ GG +N K +VK +N+G G K +YY+ + +KD +Y+AC +CNKK+++QGN YRCEKC + + WR++L ++AD ++N W+TCFQE AE +L A+ELG++ +Q+ +++V +DA FKHY R+ K E YNDE +++ + P+++ EY ++L++ +E+ G+ Sbjct: 3 LSSGVLLEILNGATPEKPVLQVINAKKIT-APNTVDRYRLLLSDGDHTYSHAMLAAQMNKFLENEELTSYSIIEVTKYMCNTLGEKRVIILLDLKVITSGTDVGERIGNPAQLGPNNI-------PKPSEVQKVDNDNSVPTAGANSIAQKGTLQVKNNQNNNNTVMANNSSTPN---TPNRA-IHVIASLTPYQNRWRIRARVTHKSNVRTWSNSRGEGKLFNVNLLDDSGEIRCTGFNDQVDKYFDMLEVNKIYYFSKCTLKTANKQYSTLKNDYEMTMNAETIIEPCNDDV-SLPVLTFDFVKISDLEKCKPNSNIDVVGIVKVCNDVGTVIGRQSQKEITKRDLQIVDQSGVAVNLTLWGEDAVKFDGQGYPVVAVKGARVSDFSGRSLSVSGASQMMVNPDIKESHVLRGWFESEGRDLSFSTFQSEG--GSAGGNSTNWKIFQQVKNENLGQGD--KADYYTAKGTVMFMKKDNCMYQACPTA----ECNKKLIDQGNGLYRCEKCNREFPNYKWRMILQANVADHSDNQWITCFQESAEQMLGIKADELGSMREQDEMQFDQVMRDALFKHYIFRMRAKVETYNDESRLKTVCVSATPVNWQEYGRKLVEQIEQLGV 605
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|676447439|ref|XP_009051407.1| (hypothetical protein LOTGIDRAFT_208727 [Lottia gigantea] >gi|556108890|gb|ESO97542.1| hypothetical protein LOTGIDRAFT_208727 [Lottia gigantea]) HSP 1 Score: 519.235 bits (1336), Expect = 2.624e-174 Identity = 261/627 (41.63%), Postives = 389/627 (62.04%), Query Frame = 0 Query: 15 PSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNP--DGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDP-KPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 P+L+ GA+ I G++ +KP+LQV+ FKKL S +++RYR+ +SDG S +MLATQ+NE + +G + N C+I+ Y+C+ N R+V+I+L+V+VL + IG P P +G NG P K P P+ + + P N S+ + KP Y + P VH IASLTPYQN+W I+ARVT KS ++ W+NSRGEG LFS++LLDESGEIRAT F + DK+Y+ +EV ++YY++ TLK ANKQYS +NN+YEMTF T + C +D ++P++TF+FV I +L +S++D++G+ + E T+ +++QKE TKRD+ +VD S VN+TLWG A F+G NPVV VK ++SDY G SLS ++SS + +NPD ++H L+GWY+ EGQS + T G GG G+N K +VK +N +G GK ++++T A I +K+ +Y+AC QCNKKVV+QGN YRCEKC + + WR++LS ++AD +N W+T FQE AE +L + A+ +G + +QN ++ +FQ+A FK Y +L K E YNDE +++ + P+D+ EY L++D+ + Sbjct: 3 PNLSGGAIEAIINGESPEKPILQVVSFKKLG--SGNAERYRIMLSDGDLIYSHAMLATQLNELMENGKVDNNCVIQVERYLCNTVQNGRRVMIVLDVNVLAPGSSIGQKIGNPQVYKPGNEGGQQVNGNDNKPDVK------PAAPINQ--SMNKPQSNYMNGSMTNNNKPGYSIKGGGNANTASPSSTRVHAIASLTPYQNRWRIRARVTQKSAVKTWSNSRGEGKLFSINLLDESGEIRATGFNDAVDKFYDMLEVNKVYYVSRATLKTANKQYSNVNNDYEMTFNPDTNIEVCTEDT-DLPTMTFDFVSISELDKHQPNSMIDIIGVVNKCGEVGTVVGRQSQKEITKRDLTIVDQSGVSVNVTLWGSDAAQFNGDGNPVVAVKGARLSDYGGRSLSVLASSQMILNPDTRESHFLRGWYDREGQSMNFDRFTSDNASG--GGGGTNWKNFSQVKSEN--LGQSGKADFFTTKATIVYMKKENCMYQAC----PTDQCNKKVVDQGNGLYRCEKCSKEFPNYKWRMILSANLADFCDNQWITMFQESAESVLGEKADIIGNMREQNENQFDMLFQNALFKSYVFKLRAKVETYNDENRLKTVCMSATPMDWVEYGNHLVQDINK 610
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|762110341|ref|XP_011437861.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform X1 [Crassostrea gigas]) HSP 1 Score: 520.005 bits (1338), Expect = 2.776e-174 Identity = 274/647 (42.35%), Postives = 395/647 (61.05%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPT----------PPMAKRSPLTSP----------NGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 MS+P+L+ GAL I GQ DKPVLQV+ KK+ Q SS+DRYR+ +SDG+ S S +MLATQ+N ++ G L N +I+ + Y+C+ +R+V+ILL++ VL + EV IG P T + P +A+ S T P M K+ N N K ++ S + SGG + VH I SLTPYQN+W I+ARVT KS IR W+NSRGEG LFS+ L D+S EIRAT F + DK+Y +EV ++YY + TLK ANKQY+T+ N+YEMTF T + PC DD+ ++P++ FNFVKI +L + A S++DV+G+ K + TT+ +++QKE TKRD+++VD S VNLTLWG A+ FDG+ +PV+ VK KVSDY G SLSA++SS + NPD+ + H LKGW+E +G + ++ G GG +N K E+K +N+G KPEY++T A + +K+ +Y+AC + CNKKVV+QGN YRCEKC + + WR++LS ++ D ++N WVTCFQE AE +L A++LGAL D N + +++VF +A FK Y + K E YNDE +++ ID+ E ++RLI+++++ Sbjct: 1 MSNPTLSSGALEAIINGQNFDKPVLQVISSKKITAQGSSADRYRLLLSDGEVSYSHAMLATQLNS-LMDGELDNLAVIQVDKYLCNTIQGDRRVMILLDLHVLQRGSEVGQRIGNPQQYKAAATQGTTAEHRNPQQYKASASQGTTAEHNSAQCPPQMPKQEGGGQSFIGTVSDKQVNNNIKKENMNGNSKGGYSLKTNNSGGTPGGTSRVHKIDSLTPYQNRWKIRARVTQKSGIRTWSNSRGEGKLFSVTLTDDSAEIRATGFNDAVDKFYELLEVNKVYYFSKATLKTANKQYTTVQNDYEMTFNPDTIIEPCDDDS-SLPTMNFNFVKINELESKAPTSLIDVIGVVKNCGDVTTIIGKQSQKEITKRDLQIVDQSGMSVNLTLWGADAQQFDGSGHPVIAVKGAKVSDYGGRSLSAMASSQIIHNPDLREGHMLKGWFEHDGHNMDFHGY-KNDGMGGGGGGSTNWKCFAEIKSENIGA---DKPEYFTTKATVLFLRKENCMYQAC----PTESCNKKVVDQGNGMYRCEKCAREFPNYKWRMILSANLGDYSDNQWVTCFQESAEAMLGIKADDLGALKDSNEQAFDQVFTEACFKSYIFKFRAKVETYNDESRLKTVTMNASTIDFKEQSQRLIEEIKK 637 The following BLAST results are available for this feature:
BLAST of replication protein a 70 kda dna-binding subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 21
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BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold11_size778918:680613..683751- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold11_size778918-snap-gene-6.54 ID=maker-scaffold11_size778918-snap-gene-6.54|Name=replication protein a 70 kda dna-binding subunit|organism=Tigriopus kingsejongensis|type=gene|length=3139bp|location=Sequence derived from alignment at scaffold11_size778918:680613..683751- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'replication protein a 70 kda dna-binding subunit' has the following synonyms
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