nuclear receptor corepressor partial, maker-scaffold121_size336169-snap-gene-2.32 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear receptor corepressor partial vs. L. salmonis genes
Match: EMLSAG00000000080 (supercontig:LSalAtl2s:LSalAtl2s100:87928:98063:-1 gene:EMLSAG00000000080 transcript:EMLSAT00000000080 description:"augustus_masked-LSalAtl2s100-processed-gene-1.14") HSP 1 Score: 281.952 bits (720), Expect = 2.389e-80 Identity = 144/211 (68.25%), Postives = 182/211 (86.26%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQEREV 211 L+S++DDLLQKI+K+DREIAKAESQIAKLKKKQQELED+++RP +D EE +P N+SIAQIIYAENR++A+ +HA L K AP N LPLYNQPSDT Y +NK H KK+LVEYFK++NE++E+RER+M +TY+KL + W K+VE+ EN KKR+E+E ++R+LYEKIFPEL+KQREDKERDHRLGTRG VRSEAD+E+VIERLQE+E+ Sbjct: 364 LRSTKDDLLQKITKVDREIAKAESQIAKLKKKQQELEDAANRPSTDAVEEDE-KPKNQSIAQIIYAENRKKARDAHAMLDKLAPHNELPLYNQPSDTVSYHENKRNHAHFKKQLVEYFKKRNEERESRERHMTETYSKLTTQWLKKVEKLENSKKRREKEQRARDLYEKIFPELRKQREDKERDHRLGTRGAVRSEADIENVIERLQEQEL 573
BLAST of nuclear receptor corepressor partial vs. L. salmonis genes
Match: EMLSAG00000000078 (supercontig:LSalAtl2s:LSalAtl2s100:81680:83836:-1 gene:EMLSAG00000000078 transcript:EMLSAT00000000078 description:"maker-LSalAtl2s100-augustus-gene-1.36") HSP 1 Score: 67.0106 bits (162), Expect = 3.342e-11 Identity = 54/150 (36.00%), Postives = 72/150 (48.00%), Query Frame = 0 Query: 354 LEYKKANQVGDQPPSLSTDEESGSSTSSCDEDNGGINHNSTGTANSNAPA------------------------SANAEPGTDIKPVIKTEVP-IKTEVKMEEGAANSVAPVLNAPGPPNALPGPQGGLTIKALGKEEDYDSSATISADE 478 L++K+ANQ GDQPP LSTDEESGSSTSSCDE+ N N+T + +++ ++ P + V+K+EV I+ +K E G P P + K L KEED DSS T+SADE Sbjct: 177 LDFKRANQSGDQPPVLSTDEESGSSTSSCDEETTYNNVNTTASTSASTVVMHVSSASXSTLIPTTTTTPSGASTETSSRPTENDIQVVKSEVKSIENHIKSESGETAPTL------------PPPPPVVPAKTLIKEEDNDSSTTMSADE 314
BLAST of nuclear receptor corepressor partial vs. SwissProt
Match: gi|226713806|sp|Q9Y618.2|NCOR2_HUMAN (RecName: Full=Nuclear receptor corepressor 2; Short=N-CoR2; AltName: Full=CTG repeat protein 26; AltName: Full=SMAP270; AltName: Full=Silencing mediator of retinoic acid and thyroid hormone receptor; Short=SMRT; AltName: Full=T3 receptor-associating factor; Short=TRAC; AltName: Full=Thyroid-, retinoic-acid-receptor-associated corepressor) HSP 1 Score: 178.718 bits (452), Expect = 1.515e-43 Identity = 91/216 (42.13%), Postives = 142/216 (65.74%), Query Frame = 0 Query: 4 SRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESS--GRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKER-DHRLGTRGT------VRSEADMEDVIERLQERE 210 S+++L+Q + ++DREI E QI+KLKKKQQ+LE+ +++P E+ S ++S+ QIIY ENR++A+ +H L P LPLYNQPSDT +Y +N + ++K+L+ YFK++N ++ E+ Y +LM W+K+VER EN +R+ +E+K RE YEK FPE++KQRE +ER R+G RG+ RSE ++ ++I+ L E+E Sbjct: 168 SKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQE 383
BLAST of nuclear receptor corepressor partial vs. SwissProt
Match: gi|341942242|sp|Q9WU42.3|NCOR2_MOUSE (RecName: Full=Nuclear receptor corepressor 2; Short=N-CoR2; AltName: Full=Silencing mediator of retinoic acid and thyroid hormone receptor; Short=SMRT; Short=SMRTe; AltName: Full=T3 receptor-associating factor; Short=TRAC; AltName: Full=Thyroid-, retinoic-acid-receptor-associated corepressor) HSP 1 Score: 178.333 bits (451), Expect = 2.156e-43 Identity = 91/216 (42.13%), Postives = 142/216 (65.74%), Query Frame = 0 Query: 4 SRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESS--GRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKER-DHRLGTRGT------VRSEADMEDVIERLQERE 210 S+++L+Q + ++DREI E QI+KLKKKQQ+LE+ +++P E+ S ++S+ QIIY ENR++A+ +H L P LPLYNQPSDT +Y +N + ++K+L+ YFK++N ++ E+ Y +LM W+K+VER EN +R+ +E+K RE YEK FPE++KQRE +ER R+G RG+ RSE ++ ++I+ L E+E Sbjct: 168 SKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQRFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQE 383
BLAST of nuclear receptor corepressor partial vs. SwissProt
Match: gi|82104713|sp|Q8QG78.1|NCOR1_XENLA (RecName: Full=Nuclear receptor corepressor 1; Short=N-CoR; Short=N-CoR1; Short=xN-CoR) HSP 1 Score: 169.859 bits (429), Expect = 8.432e-41 Identity = 95/217 (43.78%), Postives = 148/217 (68.20%), Query Frame = 0 Query: 2 KSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESS--GRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGT------VRSEADMEDVIERLQERE 210 K S+++L+Q + ++DREIAK E QI KLKKKQQ+LE+ +++P E+ S ++S+ QIIY ENR++A+++H L P LPLYNQPSDT Y +N + +++K+L+ +FK++N ++ RE+ + Y +LM W+K+V+R EN +RK +E+K+RE YEK FPE++KQRE +ER R+G RGT RSE ++ ++I+ L E+E Sbjct: 167 KLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRSVVQIIYDENRKKAEEAHKFLEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNHARKLREQNICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVGQRGTGMSATIARSEHEISEIIDGLSEQE 383
BLAST of nuclear receptor corepressor partial vs. SwissProt
Match: gi|85541753|sp|Q4KKX4.1|NCOR1_XENTR (RecName: Full=Nuclear receptor corepressor 1; Short=N-CoR; Short=N-CoR1; Short=xN-CoR) HSP 1 Score: 169.088 bits (427), Expect = 1.484e-40 Identity = 95/217 (43.78%), Postives = 147/217 (67.74%), Query Frame = 0 Query: 2 KSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESS--GRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRG------TVRSEADMEDVIERLQERE 210 K S+++L+Q + ++DREIAK E QI KLKKKQQ+LE+ +++P E+ S ++SI QIIY ENR++A+++H L P LPLYNQPSDT Y +N + +++K+L+ +FK++N ++ RE+ + Y +LM W+K+V+R EN +RK +E+K+RE YEK FPE++KQRE +ER R+G RG RSE ++ ++I+ L E+E Sbjct: 167 KLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRSIVQIIYDENRKKAEEAHKILEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNHARKLREQNICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQE 383
BLAST of nuclear receptor corepressor partial vs. SwissProt
Match: gi|12643781|sp|Q60974.1|NCOR1_MOUSE (RecName: Full=Nuclear receptor corepressor 1; Short=N-CoR; Short=N-CoR1; AltName: Full=Retinoid X receptor-interacting protein 13; Short=RIP13) HSP 1 Score: 168.318 bits (425), Expect = 2.047e-40 Identity = 94/217 (43.32%), Postives = 146/217 (67.28%), Query Frame = 0 Query: 2 KSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESS--GRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRG------TVRSEADMEDVIERLQERE 210 K S+++L+Q + ++DREIAK E QI KLKKKQQ+LE+ +++P E+ S ++SI QIIY ENR++A+++H P LPLYNQPSDT Y +N + +++K+L+ +FK++N ++ RE+ + Y +LM W+K+V+R EN +RK +E+K+RE YEK FPE++KQRE +ER R+G RG RSE ++ ++I+ L E+E Sbjct: 175 KLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQE 391
BLAST of nuclear receptor corepressor partial vs. SwissProt
Match: gi|47117817|sp|O75376.2|NCOR1_HUMAN (RecName: Full=Nuclear receptor corepressor 1; Short=N-CoR; Short=N-CoR1) HSP 1 Score: 168.318 bits (425), Expect = 2.338e-40 Identity = 94/217 (43.32%), Postives = 146/217 (67.28%), Query Frame = 0 Query: 2 KSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESS--GRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRG------TVRSEADMEDVIERLQERE 210 K S+++L+Q + ++DREIAK E QI KLKKKQQ+LE+ +++P E+ S ++SI QIIY ENR++A+++H P LPLYNQPSDT Y +N + +++K+L+ +FK++N ++ RE+ + Y +LM W+K+V+R EN +RK +E+K+RE YEK FPE++KQRE +ER R+G RG RSE ++ ++I+ L E+E Sbjct: 175 KLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQE 391
BLAST of nuclear receptor corepressor partial vs. nr
Match: gi|1325299970|ref|XP_023331770.1| (nuclear receptor corepressor 1-like [Eurytemora affinis]) HSP 1 Score: 283.878 bits (725), Expect = 1.847e-73 Identity = 135/211 (63.98%), Postives = 177/211 (83.89%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQEREV 211 +KS++DDLLQKISK+DREIAKAESQIAKLKKKQ+ELED++ +P +D + +P N+S AQ +Y+ENRR+A +SHASL +F+P N LPLYNQPSDT+ Y NK +T+ K++LV+YFK++NE+ ETR+RYM TY KL S W K+V+R+EN KK+KERE KSRE+YEK+FPEL+KQREDKER+ RLGTRGTVRS+ + +DVI+R+QE E+ Sbjct: 172 IKSTKDDLLQKISKVDREIAKAESQIAKLKKKQEELEDAAKKPSTDSSVDEE-KP-NQSTAQNVYSENRRKASQSHASLNRFSPGNLLPLYNQPSDTEVYSKNKKDYTVFKRKLVDYFKKKNEENETRDRYMTVTYCKLTSVWTKKVDRAENSKKKKEREGKSREMYEKMFPELRKQREDKERNERLGTRGTVRSDQEFQDVIDRIQEHEM 380 HSP 2 Score: 68.5514 bits (166), Expect = 1.581e-7 Identity = 242/944 (25.64%), Postives = 368/944 (38.98%), Query Frame = 0 Query: 814 SGSITQGTPVNQASLAAAAHRSTYDLSHHKGGGAHER-VGSITHGTPLYDNKKHPQVI---NVSDHPKVVYDRNPQSSAEYYRRTTVSPAGAPVAYNYPSTTTATSSSRGSPYVEPHMSSRQVIMNDFAMARSTEMQRRPESREHPRVLSPPRISGRDPSPRPRSIGDRIMPDPRRDVRGLD----PRYDPRAIDPR--LLPEH-----RGDPKADLRSIHESRVSLEHRQDLRLDPRTQVGLDARVGLEHRSAALDPRRAGPPPPTSDPRIVTDPRARVDQHIRGYPYANGYYMMPDRKMMPLPSQMRDPQTRTPPRSVQAATPPER------SAAIIHRQGSLTSGKPVMPKGNMAHRDVEIYRTNPEVTISK-----TSSPRHTTYSDNNALASLVDVAVQQPKLPDGKDRAASNIMQQAGAHMQRQVYERQLYDMRVAATSSAGVAPTARSSGADITLQVRNERAK----QLSLMTGAKAAGHPAMVGAAATGNGEKNLTAASLIDAIITHSIHTGPNDMAAAVAAGKAGPFHRSPTGEPSSAIPDDRRPSPSPF---------RISRSPSLKGEAVPEDGSAHGSRPGSRSSATNEMRPPSE--VASDMAIHTLG-----LTNSEAIPEPHWKRRGY-------LPPASGGNSAASIMPAPRPANSVAAL-EERSITRVSQPNPPSKSYPESCAPRLGMEPISPPIETHNGSDGRPTSKREGDPGLSPL--------------------------DYVNSKIVEEMKKNESSGMALAGPSGNGSSNTVGGDSAATITALKRPLENNVRPVLNTAAEVRPLGPTETDESPKKKSRLEDPSGATNLPAASVPAPMTSDIPPADSPGSEGEMVIDESVVSDSAPPSKEDLPKGSVSP----------AAPPK--------------------PQYEPLSDDE 1647 SGSIT+G P+ + +DL+ K +H+ GS+T GTP+Y +++ H + + D + ++SA AY P + SRGS SSR VI ND+ +A++ + R+ ++ E V PRSI +R RDV +D PR+DPR+ + ++P + R DPKAD+ S R+ R DPR + D R L+HR+A DPRAR Q YP + MP R+ +PPR++ PP R S+ R GS+TSG +P+ ++ ++ PEV+I+K TS P + T + L + ++A QQ K+ + R ++ + + SSA ++ +G D + ++R++ ++M +AA ++++T LID I+T+ I+ P + P + S ++P RP P F + SRSPS+K E ED S P S A P E + H T +E++ +WKR+ Y PP+ G +P P P+ VA L +ER I RV+Q P P+ R +E ISPP GSD ++ PG P+ DYV +KI E MK ++ A G S S ++G + KRPLE R + AA+V ES +K+ + ++ + ++P DSPGS GEMVIDE+ DSA K + P P PP+ P+YEPLSDD+ Sbjct: 1078 SGSITRGQPIPPLPQHSTGR---FDLNQMK---SHQNPRGSLTSGTPVYTDRRTAAAYTPEQTRSHQQTMMDMHKKASAY-------------SAYARP----PSHDSRGS-------SSRSVIENDYKIAQT--LPRKDQNDELRGVF-------------PRSIDNR-----GRDVLVVDMKNEPRFDPRSYGSQRMVVPSNPYSGIRTDPKADMPS----------REPPRGDPRADLH-DPR--LDHRAA-------------------MDPRAR--QAFSAYPVS-----------MPT---GRETGRSSPPRTL----PPSRGHTGPPSSVPSPRPGSITSG---LPRSSV---EIHTISRQPEVSITKQPAMPTSRPEYPTTN----LTNFAEIASQQAKMRENDHRGNPSLT---------------VTRTEIGGPSSARMSQDLAKAGYDNRVGKFDDRSRVGRDSFNVMPDPNRMDPKT---SAAYKALDQSMTTKRLIDMIVTNQINKNPPVQFSNT------PMSSAAASVASYSMPS--RPPPQSFMDGKESPSKKTSRSPSVKTEG--EDRSM----PMRSSPAMTNSHPEHENMFKEEAQKHRTSPYPGPSTQAESLE--YWKRKQYSDPNFMPRPPSQGS------LPRP-PSGGVAQLSDERQIIRVAQNASPR---PDKPPGRPMLEAISPP-----GSDPPRSTPNYNYPGAEPMVRYFAAAQRKPHEVDPAAAKSSGVVFDYVKNKIAEVMKNDKG---AETGKSPTPSGVSMGPPN-------KRPLEIETRG--SPAADV-------GMESLRKRYKPDEATAGNDMP---------------DSPGS-GEMVIDETARPDSAHSHKTESPAPHADPNLYQGYRMGQQLPPRSSPGQATRPPPAANSATASDPRYEPLSDDD 1825
BLAST of nuclear receptor corepressor partial vs. nr
Match: gi|1330931157|gb|PNF41940.1| (hypothetical protein B7P43_G14654 [Cryptotermes secundus]) HSP 1 Score: 240.35 bits (612), Expect = 1.293e-63 Identity = 113/211 (53.55%), Postives = 167/211 (79.15%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQEREV 211 ++++DDLLQ+I K+DREIAK ESQI KLKKKQQELE+++++P +EEE +P ++S AQ IYAENR++A+++H+ L + P LPLYNQPSDT Y +NK KH K+RL+EYFK+++ ++E RE+Y+ TY+KLM W ++VE+ E +KRK +EAK+RE +EK+FPEL+KQRED+ER +R+G R ++SEAD+E++++ LQE+E+ Sbjct: 68 FRATKDDLLQQIGKVDREIAKVESQICKLKKKQQELEETANKPSIKKEEEEIAQPKHQSPAQKIYAENRKKAQEAHSLLERLGPKVELPLYNQPSDTAVYHENKRKHLTFKRRLMEYFKRKHSEREGREKYLTATYSKLMQEWLRKVEKVEASQKRKAKEAKNREFFEKVFPELRKQREDRERFNRVGAR--IKSEADLEEIMDGLQEQEM 276
BLAST of nuclear receptor corepressor partial vs. nr
Match: gi|1339065096|ref|XP_023718119.1| (nuclear receptor corepressor 1-like [Cryptotermes secundus]) HSP 1 Score: 244.973 bits (624), Expect = 3.085e-63 Identity = 115/221 (52.04%), Postives = 169/221 (76.47%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQEREVRRGNKRGQHV 221 ++++DDLLQ+I K+DREIAK ESQI KLKKKQQELE+++++P +EEE +P ++S AQ IYAENR++A+++H+ L + P LPLYNQPSDT Y +NK KH K+RL+EYFK+++ ++E RE+Y+ TY+KLM W ++VE+ E +KRK +EAK+RE +EK+FPEL+KQRED+ER +R+G R ++SEAD+E++++ LQE+E+ R V Sbjct: 315 FRATKDDLLQQIGKVDREIAKVESQICKLKKKQQELEETANKPSIKKEEEEIAQPKHQSPAQKIYAENRKKAQEAHSLLERLGPKVELPLYNQPSDTAVYHENKRKHLTFKRRLMEYFKRKHSEREGREKYLTATYSKLMQEWLRKVEKVEASQKRKAKEAKNREFFEKVFPELRKQREDRERFNRVGAR--IKSEADLEEIMDGLQEQEMEDKKMRSYAV 533
BLAST of nuclear receptor corepressor partial vs. nr
Match: gi|1227964619|ref|XP_021913621.1| (uncharacterized protein LOC110826863, partial [Zootermopsis nevadensis]) HSP 1 Score: 246.128 bits (627), Expect = 1.251e-61 Identity = 114/221 (51.58%), Postives = 171/221 (77.38%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQEREVRRGNKRGQHV 221 ++++D+LLQ+I K+DREIAKAESQI+KLKKKQQELE+++S+P +EEE +P ++S AQ IYA+NR++A+++H+ L K P LPLYNQPSDT Y +NK ++ K+RL+EYFK+++ +E+RE+Y+ TY+KLM W ++VE+ E +KRK +EAK+RE +EK+FPEL+KQRED+ER +R+G R ++SEAD+E++++ LQE+E+ R V Sbjct: 260 FRATKDELLQQIGKVDREIAKAESQISKLKKKQQELEEAASKPSIKKEEEEIAQPKHQSPAQKIYADNRKKAQEAHSLLEKLGPKVDLPLYNQPSDTAVYHENKRRNLTFKRRLMEYFKRKHSDRESREKYLTATYSKLMQEWLRKVEKVEASQKRKVKEAKNREFFEKVFPELRKQREDRERFNRVGAR--IKSEADLEEIMDGLQEQEMEDKKMRSYAV 478
BLAST of nuclear receptor corepressor partial vs. nr
Match: gi|646720859|gb|KDR22442.1| (Nuclear receptor corepressor 1, partial [Zootermopsis nevadensis]) HSP 1 Score: 244.973 bits (624), Expect = 2.462e-61 Identity = 114/221 (51.58%), Postives = 171/221 (77.38%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQEREVRRGNKRGQHV 221 ++++D+LLQ+I K+DREIAKAESQI+KLKKKQQELE+++S+P +EEE +P ++S AQ IYA+NR++A+++H+ L K P LPLYNQPSDT Y +NK ++ K+RL+EYFK+++ +E+RE+Y+ TY+KLM W ++VE+ E +KRK +EAK+RE +EK+FPEL+KQRED+ER +R+G R ++SEAD+E++++ LQE+E+ R V Sbjct: 29 FRATKDELLQQIGKVDREIAKAESQISKLKKKQQELEEAASKPSIKKEEEEIAQPKHQSPAQKIYADNRKKAQEAHSLLEKLGPKVDLPLYNQPSDTAVYHENKRRNLTFKRRLMEYFKRKHSDRESREKYLTATYSKLMQEWLRKVEKVEASQKRKVKEAKNREFFEKVFPELRKQREDRERFNRVGAR--IKSEADLEEIMDGLQEQEMEDKKMRSYAV 247
BLAST of nuclear receptor corepressor partial vs. nr
Match: gi|242011439|ref|XP_002426457.1| (conserved hypothetical protein [Pediculus humanus corporis] >gi|212510569|gb|EEB13719.1| conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 233.802 bits (595), Expect = 6.512e-61 Identity = 110/221 (49.77%), Postives = 171/221 (77.38%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQEREVRRGNKRGQHV 221 L+++++DLLQ+I+K+DREIAK E QI KLK KQ+ELE+++S+P++ +EE+ + +P ++S AQ IYAENR++A+++H+ L K P +PLYNQPSDT+ Y +NK +H KK L++Y KQQ +K++ ++++ TY+KLMS W ++V++ EN KRK +EAK+RE +EK+FPEL+KQREDKER +R+G R ++SEAD+E++++ LQE+E+ R V Sbjct: 201 LRATKEDLLQQINKVDREIAKTEQQIFKLKSKQRELEEAASKPVAKKEEKETEQPKHQSPAQKIYAENRKKAQEAHSLLDKLGPKVEVPLYNQPSDTNVYHENKRRHLNFKKCLIDYLKQQAAEKQSYDKFLTLTYSKLMSEWLRKVDKIENSAKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGAR--IKSEADLEEIMDGLQEQEMEDKKMRSYAV 419
BLAST of nuclear receptor corepressor partial vs. nr
Match: gi|952541724|gb|KRT86345.1| (hypothetical protein AMK59_1175, partial [Oryctes borbonicus]) HSP 1 Score: 223.787 bits (569), Expect = 1.415e-58 Identity = 104/209 (49.76%), Postives = 160/209 (76.56%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQER 209 ++++D+LLQ+I K+DREIAK ESQI L+KK QELE+S+S+P + E E +P ++S+AQ IYAENR++A+ +HA+L P P+YNQPSD Y +NK K K+RL+EYFK+++ +K+TR +++ TY+K+M W ++V+++E+ KRK +EAK+RE +EK+FPEL+KQREDKER +R+G R ++SEAD+E++++ LQE+ Sbjct: 60 FRTTKDELLQQIGKVDREIAKTESQITILRKKMQELEESASKPATKTEVEEDCQPKHQSLAQKIYAENRKKAQSAHATLDSLGPKVEWPIYNQPSDAPVYLENKRKQLAYKRRLLEYFKKRHVEKDTRNSHLIVTYSKMMQEWHRKVDKTESSSKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGAR--IKSEADLEEIMDNLQEQ 266
BLAST of nuclear receptor corepressor partial vs. nr
Match: gi|1059418303|ref|XP_017781956.1| (PREDICTED: uncharacterized protein LOC108566538 [Nicrophorus vespilloides]) HSP 1 Score: 234.187 bits (596), Expect = 3.619e-58 Identity = 114/221 (51.58%), Postives = 163/221 (73.76%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQEREVRRGNKRGQHV 221 ++++DDLLQ+ISK+DREIAKAESQI LKKKQQELE+++S+P +EEE +P ++S+AQ IYAENRRRA+ +HA L P+YNQPSDT Y +NK ++ KK L+EYFK+++ +K+ R Y+ DTY+KLM W ++VE+ E KRK +EAK+R+ +EK+FPEL+KQREDKER +R+G R ++SEAD+E++++ LQE+ + R V Sbjct: 161 FRTTKDDLLQQISKVDREIAKAESQIGILKKKQQELEEAASKPSVKKEEEEVCQPKHQSLAQKIYAENRRRAQNAHAKLDVLGGKVDWPIYNQPSDTAVYQENKRRNISFKKYLLEYFKKRHVEKDQRNTYLTDTYSKLMQEWLRKVEKIEGSTKRKVKEAKNRDFFEKVFPELRKQREDKERFNRVGAR--IKSEADLEEIMDNLQEQALEDKKMRSYAV 379
BLAST of nuclear receptor corepressor partial vs. nr
Match: gi|1133440892|ref|XP_019876855.1| (PREDICTED: nuclear receptor corepressor 2 [Aethina tumida]) HSP 1 Score: 224.172 bits (570), Expect = 4.605e-58 Identity = 108/209 (51.67%), Postives = 158/209 (75.60%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQER 209 ++++D+L+Q+I K+DREIAK ES IA LKKK+QELE+ +++P E E +P ++S+ Q IYAENR++A+ +H L P PLYNQPSDT Y +NK KH +K RL+EYFK+++ +KETR Y+ +TY+KLM W ++V++ E+ KRK +EAK+RE +EK+FPEL+KQREDKER +R+G+R V+SEADME++++ LQE+ Sbjct: 64 FRTTKDELIQQIGKVDREIAKTESSIAILKKKEQELEEVANKPSVKNEVEEDTQPKHQSLHQKIYAENRKKAQNAHGKLDALGPKVDWPLYNQPSDTAVYHENKRKHVALKSRLIEYFKRRHAEKETRNCYLTETYSKLMQEWLRKVDKVESSSKRKGKEAKNREFFEKVFPELRKQREDKERFNRVGSR--VKSEADMEEIMDNLQEQ 270
BLAST of nuclear receptor corepressor partial vs. nr
Match: gi|1233161437|ref|XP_022201931.1| (nuclear receptor corepressor 1 [Nilaparvata lugens]) HSP 1 Score: 213.386 bits (542), Expect = 1.585e-55 Identity = 111/221 (50.23%), Postives = 165/221 (74.66%), Query Frame = 0 Query: 1 LKSSRDDLLQKISKIDREIAKAESQIAKLKKKQQELEDSSSRPLSDEEEESSGRPHNKSIAQIIYAENRRRAKKSHASLAKFAPPNTLPLYNQPSDTDEYFDNKTKHTLIKKRLVEYFKQQNEQKETRERYMLDTYAKLMSGWQKRVERSENMKKRKEREAKSRELYEKIFPELKKQREDKERDHRLGTRGTVRSEADMEDVIERLQEREVRRGNKRGQHV 221 ++++ DLLQ ISK+DREI K ESQI+KLKKK++ELE+SS++P + ++EE +P ++S+AQ IYAENR++A+K+H + K P LPLYNQPSD+ Y DNK KH KK+L+E+ +++ +KE RE+Y+ +TYA+L WQ++VE+ EN K K +EAK+RE +EK+FPEL+KQRE +ER +R+G R ++S+A+ E+VI+ LQE+E+ R V Sbjct: 108 FRTTKSDLLQHISKVDREITKTESQISKLKKKERELEESSNKPTTTKDEEEITQPKHQSLAQKIYAENRKKAQKAHGMMEKMGPKIELPLYNQPSDSKVYHDNKKKHATFKKKLLEHLRKKQTEKEGREKYLSETYARLTQEWQRKVEKIENSPKWKAKEAKNREFFEKVFPELRKQRELRERLNRIGAR--IKSDAEFEEVIDGLQEQEMEEKKMRSYAV 326 The following BLAST results are available for this feature:
BLAST of nuclear receptor corepressor partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of nuclear receptor corepressor partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 6
BLAST of nuclear receptor corepressor partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold121_size336169:214683..226039+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold121_size336169-snap-gene-2.32 ID=maker-scaffold121_size336169-snap-gene-2.32|Name=nuclear receptor corepressor partial|organism=Tigriopus kingsejongensis|type=gene|length=11357bp|location=Sequence derived from alignment at scaffold121_size336169:214683..226039+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear receptor corepressor partial' has the following synonyms
Add to Basket
|