lrr domain-containing protein, maker-scaffold1224_size54636-snap-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of lrr domain-containing protein vs. L. salmonis genes
Match: EMLSAG00000004312 (supercontig:LSalAtl2s:LSalAtl2s226:92170:203671:1 gene:EMLSAG00000004312 transcript:EMLSAT00000004312 description:"maker-LSalAtl2s226-snap-gene-2.27") HSP 1 Score: 364.77 bits (935), Expect = 1.940e-113 Identity = 223/362 (61.60%), Postives = 265/362 (73.20%), Query Frame = 0 Query: 77 NVEQILMQAAKGQHGGAAFAAQGHLGTPVGTPDTLSEAGSFKSRTRRTLPYLPLEEPAPLPSE-KKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMNDHMNRPGSALGLLQASTVVSSKGPTSQTREHEKRILESILPPDLRHLVRGGSPGTIQQMKMKLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFG-LSGAQSDRIRLEMQRYATMRDPRLRAEMKHKLNPVLDAQLNRNRRTRGHRRNLSDPRFSTSLTDSLGDEDLHFSRPYSSLARDYDPLSDSMGLDQSRSYLGGSALDGITGGLRDTAI-----NSHDLDDTSRNRYLASLRFVVV 431 N++ +L+QAA+ QHG TPVGTPDT+SE GS KSR+RRTLPYLP EEP PLPS+ KK +D+MRA+ANLRQSS DG T R S+ +PR SSSETNLRKL +H +RPGSALGLLQAS+VVSS GPTS T+EHEKRILE+ILPPDLRHLVRGGSP +Q +K+++E+E+RK T+ GTEAE ARK AE RLFG L AQS+RIR EMQRYATMRDPRLRAEMKHKLNPV+DAQLNRNRR RGHRR LSDPR +++LTD+ DE RPYSSLARD+DPL++S+G+D S+SY G ALDG GG I +DD RNRYL + R ++ Sbjct: 1285 NLDSVLLQAARAQHGITG------TWTPVGTPDTMSETGSLKSRSRRTLPYLPPEEPTPLPSQAKKSQDRMRAYANLRQSSFDGAT-RALLSS------VKPRPSSSETNLRKLTATEHYSRPGSALGLLQASSVVSSYGPTSATKEHEKRILENILPPDLRHLVRGGSPSAVQHIKLQIEEEMRK-------TSGDKFTGTEAEQARKNAERRLFGPLGSAQSERIRQEMQRYATMRDPRLRAEMKHKLNPVMDAQLNRNRRYRGHRRQLSDPRMTSTLTDNFEDE-YSIGRPYSSLARDFDPLAESLGMDXSQSYFGSGALDG--GGXNXATILKDHSGYESIDD--RNRYLNNRRSQLI 1621
BLAST of lrr domain-containing protein vs. nr
Match: gi|1325314386|ref|XP_023338868.1| (uncharacterized protein LOC111709441 [Eurytemora affinis]) HSP 1 Score: 251.136 bits (640), Expect = 7.162e-71 Identity = 181/336 (53.87%), Postives = 238/336 (70.83%), Query Frame = 0 Query: 103 TPVGTPDTLSEAGSFKS-RTR-RTLPYLPLEEPAPLPSE-KKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMNDHMNRPGSALGLLQASTVVSSKGPTSQTREHEKRILESILPPDLRHLVRGG--SPGTIQQMKMKLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFGLSGAQSDRIRLEMQRYATMRDPRLRAEMKHKLNPVLDAQLNRNRRTRGHRRNLSDPRFSTSLTDSLGDEDLHFS----RPYSSLARDYDPLSDSMGLDQSRSYLGGSALDGITGGLRDTAINSHDLDDTSRNRYLASLRFV 429 T V TPDTLSE+GS KS R+R RTLP+LP EEPAPLPS+ KK +D+MR++ +RQSSLDG+TG +S +S +G RPR S+SETNLRKLA+ + NRP SALGLLQAS+V+SS GP+ +EHEKRILE+ILPPDLRHL+RGG S + Q ++ ++E++L+ +++ T+ + G E+AR AE +LFG+ QS+RIR EMQRYA +DPRLRAEMKHKLNPV+D QL+R RR RGHRRNLSD R +TSLTDS+GD D FS RP+SSL+ + D G D S+SYL GLR++++ + L + + R + R + Sbjct: 422 TLVATPDTLSESGSIKSARSRSRTLPFLPPEEPAPLPSQAKKAQDRMRSYGKMRQSSLDGITGMPPKSYSS--FG-RPRPSNSETNLRKLALEER-NRPVSALGLLQASSVISSHGPSQAAKEHEKRILENILPPDLRHLIRGGGGSSYSFQNIRQQIENDLKG---GVSSNTSGPSAG---EIARLNAEKKLFGV---QSERIRAEMQRYAATKDPRLRAEMKHKLNPVMDNQLSRTRRMRGHRRNLSDGRITTSLTDSMGD-DTGFSSLPNRPFSSLSGGHLDSYD-YGTDNSQSYL--------FEGLRESSVPGYGLTEEEKFRAYNNPRMM 734
BLAST of lrr domain-containing protein vs. nr
Match: gi|1325315995|ref|XP_023339705.1| (mediator of RNA polymerase II transcription subunit 25-like [Eurytemora affinis]) HSP 1 Score: 231.491 bits (589), Expect = 1.856e-64 Identity = 149/268 (55.60%), Postives = 198/268 (73.88%), Query Frame = 0 Query: 75 TTNVEQILMQAAKGQHGGAAFAAQGHLG-TPVGTPDTLSEAGSFKS-RTR-RTLPYLPLEEPAPLPSE-KKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMNDHMNRPGSALGLLQASTVVSSKGPTSQTREHEKRILESILPPDLRHLVR--GGSPGTIQQMKMKLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFGLSGAQSDRIRLEMQRYATMRDPRLRAEMKHKLNPVLDAQLNRNR 336 + N +Q + Q+ G+ G + QG G +PV TPDTLSE+GS KS R+R RTLP+LP EEPAPLPS+ KK +D+MR++ +RQSSLDG+TG +S +S +G RPR S+SETNLRKLA+ + NRP SALGLLQAS+V+SS GP+ +EHEKRILE+ILPPDLRHL+R GGS + Q ++ ++E++L+ +++ T+ + G E+AR AE +LFG+ QS+RIR EMQRYA +DPRLRAEMKHKLNPV+D QL+R R Sbjct: 568 SINHQQSINQSEYGRKSGFV-SVQGSPGLSPVATPDTLSESGSIKSARSRSRTLPFLPPEEPAPLPSQAKKAQDRMRSYGKMRQSSLDGITGMPPKSYSS--FG-RPRPSNSETNLRKLALEER-NRPVSALGLLQASSVISSHGPSQAAKEHEKRILENILPPDLRHLIRGGGGSSYSFQNIRQQIENDLKG---GVSSNTSGPSAG---EIARLNAEKKLFGV---QSERIRAEMQRYAATKDPRLRAEMKHKLNPVMDNQLSRTR 821
BLAST of lrr domain-containing protein vs. nr
Match: gi|1339086219|ref|XP_023704145.1| (uncharacterized protein LOC111862739 [Cryptotermes secundus]) HSP 1 Score: 132.88 bits (333), Expect = 1.323e-29 Identity = 136/359 (37.88%), Postives = 178/359 (49.58%), Query Frame = 0 Query: 102 GTPVGTP------------DTLSEAGSFKS-RTRRTLPYLPL-EEPAPLPSEKKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMN-DHMNRPGSALGLLQASTVVSS-------KGPTSQTREHEKRILE--SILPPDLRHLVRGGS-----------PGTIQQMKMKLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFGLSGAQSD-RIRLEMQRYATMRDPRLRAEMKHKL-NPVLDAQLNRNRRTRGHRRNLSDPR----FSTSLTDSLGDED-----LHFSRPYSSLARDYDPLSDS---MGLDQSRSYLGGSALDGITGGLRDTAINS 411 GTPVGTP DTLSE S KS R RR LP +P +E LPS KK R+++ LRQ+SLDG+ R +N PR S+SETNLRK+++ D + RPGSALGLLQAS+VVSS G T T + + E S LPPDLRHL+ P + +K +L DE+R ATT+ RL GL + R+R E ++ +RDP R +++ KL +PV + R+R+ RGHRR LSDP+ FS D + D LH S A +Y+ + D D S+SYL S+ G LR+TAINS Sbjct: 279 GTPVGTPRGSRDTGGGDSSDTLSETDSQKSLRMRRKLPSIPTHQEAVLLPSSKK-----RSYSPLRQTSLDGMLSR---VSNLML----PRPSASETNLRKVSLGVDPVPRPGSALGLLQASSVVSSSGMRTATSGMTGATSVYSSPLAELASCLPPDLRHLLNTPGMADSIACGKQLPTYMHNLKEQLRDEIR-------ATTS--------------DRRRLPGLMDKDREARLRRERDKFEALRDPLKRLDVQRKLASPV----IGRSRKLRGHRRQLSDPKIHPPFSPIKEDGSLESDYDRRYLHPSLKPPYKAYEYESIDDVGWRAEWDPSQSYL-TSSYAAAGGALRETAINS 599
BLAST of lrr domain-containing protein vs. nr
Match: gi|1330921454|gb|PNF37334.1| (hypothetical protein B7P43_G00482 [Cryptotermes secundus]) HSP 1 Score: 131.724 bits (330), Expect = 3.020e-29 Identity = 136/359 (37.88%), Postives = 178/359 (49.58%), Query Frame = 0 Query: 102 GTPVGTP------------DTLSEAGSFKS-RTRRTLPYLPL-EEPAPLPSEKKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMN-DHMNRPGSALGLLQASTVVSS-------KGPTSQTREHEKRILE--SILPPDLRHLVRGGS-----------PGTIQQMKMKLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFGLSGAQSD-RIRLEMQRYATMRDPRLRAEMKHKL-NPVLDAQLNRNRRTRGHRRNLSDPR----FSTSLTDSLGDED-----LHFSRPYSSLARDYDPLSDS---MGLDQSRSYLGGSALDGITGGLRDTAINS 411 GTPVGTP DTLSE S KS R RR LP +P +E LPS KK R+++ LRQ+SLDG+ R +N PR S+SETNLRK+++ D + RPGSALGLLQAS+VVSS G T T + + E S LPPDLRHL+ P + +K +L DE+R ATT+ RL GL + R+R E ++ +RDP R +++ KL +PV + R+R+ RGHRR LSDP+ FS D + D LH S A +Y+ + D D S+SYL S+ G LR+TAINS Sbjct: 541 GTPVGTPRGSRDTGGGDSSDTLSETDSQKSLRMRRKLPSIPTHQEAVLLPSSKK-----RSYSPLRQTSLDGMLSR---VSNLML----PRPSASETNLRKVSLGVDPVPRPGSALGLLQASSVVSSSGMRTATSGMTGATSVYSSPLAELASCLPPDLRHLLNTPGMADSIACGKQLPTYMHNLKEQLRDEIR-------ATTS--------------DRRRLPGLMDKDREARLRRERDKFEALRDPLKRLDVQRKLASPV----IGRSRKLRGHRRQLSDPKIHPPFSPIKEDGSLESDYDRRYLHPSLKPPYKAYEYESIDDVGWRAEWDPSQSYL-TSSYAAAGGALRETAINS 861
BLAST of lrr domain-containing protein vs. nr
Match: gi|1330921459|gb|PNF37339.1| (hypothetical protein B7P43_G00482 [Cryptotermes secundus]) HSP 1 Score: 131.724 bits (330), Expect = 3.404e-29 Identity = 136/359 (37.88%), Postives = 178/359 (49.58%), Query Frame = 0 Query: 102 GTPVGTP------------DTLSEAGSFKS-RTRRTLPYLPL-EEPAPLPSEKKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMN-DHMNRPGSALGLLQASTVVSS-------KGPTSQTREHEKRILE--SILPPDLRHLVRGGS-----------PGTIQQMKMKLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFGLSGAQSD-RIRLEMQRYATMRDPRLRAEMKHKL-NPVLDAQLNRNRRTRGHRRNLSDPR----FSTSLTDSLGDED-----LHFSRPYSSLARDYDPLSDS---MGLDQSRSYLGGSALDGITGGLRDTAINS 411 GTPVGTP DTLSE S KS R RR LP +P +E LPS KK R+++ LRQ+SLDG+ R +N PR S+SETNLRK+++ D + RPGSALGLLQAS+VVSS G T T + + E S LPPDLRHL+ P + +K +L DE+R ATT+ RL GL + R+R E ++ +RDP R +++ KL +PV + R+R+ RGHRR LSDP+ FS D + D LH S A +Y+ + D D S+SYL S+ G LR+TAINS Sbjct: 547 GTPVGTPRGSRDTGGGDSSDTLSETDSQKSLRMRRKLPSIPTHQEAVLLPSSKK-----RSYSPLRQTSLDGMLSR---VSNLML----PRPSASETNLRKVSLGVDPVPRPGSALGLLQASSVVSSSGMRTATSGMTGATSVYSSPLAELASCLPPDLRHLLNTPGMADSIACGKQLPTYMHNLKEQLRDEIR-------ATTS--------------DRRRLPGLMDKDREARLRRERDKFEALRDPLKRLDVQRKLASPV----IGRSRKLRGHRRQLSDPKIHPPFSPIKEDGSLESDYDRRYLHPSLKPPYKAYEYESIDDVGWRAEWDPSQSYL-TSSYAAAGGALRETAINS 867
BLAST of lrr domain-containing protein vs. nr
Match: gi|1330921455|gb|PNF37335.1| (hypothetical protein B7P43_G00482 [Cryptotermes secundus]) HSP 1 Score: 131.339 bits (329), Expect = 4.092e-29 Identity = 136/359 (37.88%), Postives = 178/359 (49.58%), Query Frame = 0 Query: 102 GTPVGTP------------DTLSEAGSFKS-RTRRTLPYLPL-EEPAPLPSEKKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMN-DHMNRPGSALGLLQASTVVSS-------KGPTSQTREHEKRILE--SILPPDLRHLVRGGS-----------PGTIQQMKMKLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFGLSGAQSD-RIRLEMQRYATMRDPRLRAEMKHKL-NPVLDAQLNRNRRTRGHRRNLSDPR----FSTSLTDSLGDED-----LHFSRPYSSLARDYDPLSDS---MGLDQSRSYLGGSALDGITGGLRDTAINS 411 GTPVGTP DTLSE S KS R RR LP +P +E LPS KK R+++ LRQ+SLDG+ R +N PR S+SETNLRK+++ D + RPGSALGLLQAS+VVSS G T T + + E S LPPDLRHL+ P + +K +L DE+R ATT+ RL GL + R+R E ++ +RDP R +++ KL +PV + R+R+ RGHRR LSDP+ FS D + D LH S A +Y+ + D D S+SYL S+ G LR+TAINS Sbjct: 541 GTPVGTPRGSRDTGGGDSSDTLSETDSQKSLRMRRKLPSIPTHQEAVLLPSSKK-----RSYSPLRQTSLDGMLSR---VSNLML----PRPSASETNLRKVSLGVDPVPRPGSALGLLQASSVVSSSGMRTATSGMTGATSVYSSPLAELASCLPPDLRHLLNTPGMADSIACGKQLPTYMHNLKEQLRDEIR-------ATTS--------------DRRRLPGLMDKDREARLRRERDKFEALRDPLKRLDVQRKLASPV----IGRSRKLRGHRRQLSDPKIHPPFSPIKEDGSLESDYDRRYLHPSLKPPYKAYEYESIDDVGWRAEWDPSQSYL-TSSYAAAGGALRETAINS 861
BLAST of lrr domain-containing protein vs. nr
Match: gi|1330921458|gb|PNF37338.1| (hypothetical protein B7P43_G00482 [Cryptotermes secundus]) HSP 1 Score: 131.339 bits (329), Expect = 4.300e-29 Identity = 136/359 (37.88%), Postives = 178/359 (49.58%), Query Frame = 0 Query: 102 GTPVGTP------------DTLSEAGSFKS-RTRRTLPYLPL-EEPAPLPSEKKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMN-DHMNRPGSALGLLQASTVVSS-------KGPTSQTREHEKRILE--SILPPDLRHLVRGGS-----------PGTIQQMKMKLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFGLSGAQSD-RIRLEMQRYATMRDPRLRAEMKHKL-NPVLDAQLNRNRRTRGHRRNLSDPR----FSTSLTDSLGDED-----LHFSRPYSSLARDYDPLSDS---MGLDQSRSYLGGSALDGITGGLRDTAINS 411 GTPVGTP DTLSE S KS R RR LP +P +E LPS KK R+++ LRQ+SLDG+ R +N PR S+SETNLRK+++ D + RPGSALGLLQAS+VVSS G T T + + E S LPPDLRHL+ P + +K +L DE+R ATT+ RL GL + R+R E ++ +RDP R +++ KL +PV + R+R+ RGHRR LSDP+ FS D + D LH S A +Y+ + D D S+SYL S+ G LR+TAINS Sbjct: 497 GTPVGTPRGSRDTGGGDSSDTLSETDSQKSLRMRRKLPSIPTHQEAVLLPSSKK-----RSYSPLRQTSLDGMLSR---VSNLML----PRPSASETNLRKVSLGVDPVPRPGSALGLLQASSVVSSSGMRTATSGMTGATSVYSSPLAELASCLPPDLRHLLNTPGMADSIACGKQLPTYMHNLKEQLRDEIR-------ATTS--------------DRRRLPGLMDKDREARLRRERDKFEALRDPLKRLDVQRKLASPV----IGRSRKLRGHRRQLSDPKIHPPFSPIKEDGSLESDYDRRYLHPSLKPPYKAYEYESIDDVGWRAEWDPSQSYL-TSSYAAAGGALRETAINS 817
BLAST of lrr domain-containing protein vs. nr
Match: gi|1330921451|gb|PNF37331.1| (hypothetical protein B7P43_G00482 [Cryptotermes secundus]) HSP 1 Score: 129.798 bits (325), Expect = 5.462e-29 Identity = 136/359 (37.88%), Postives = 178/359 (49.58%), Query Frame = 0 Query: 102 GTPVGTP------------DTLSEAGSFKS-RTRRTLPYLPL-EEPAPLPSEKKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMN-DHMNRPGSALGLLQASTVVSS-------KGPTSQTREHEKRILE--SILPPDLRHLVRGGS-----------PGTIQQMKMKLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFGLSGAQSD-RIRLEMQRYATMRDPRLRAEMKHKL-NPVLDAQLNRNRRTRGHRRNLSDPR----FSTSLTDSLGDED-----LHFSRPYSSLARDYDPLSDS---MGLDQSRSYLGGSALDGITGGLRDTAINS 411 GTPVGTP DTLSE S KS R RR LP +P +E LPS KK R+++ LRQ+SLDG+ R +N PR S+SETNLRK+++ D + RPGSALGLLQAS+VVSS G T T + + E S LPPDLRHL+ P + +K +L DE+R ATT+ RL GL + R+R E ++ +RDP R +++ KL +PV + R+R+ RGHRR LSDP+ FS D + D LH S A +Y+ + D D S+SYL S+ G LR+TAINS Sbjct: 45 GTPVGTPRGSRDTGGGDSSDTLSETDSQKSLRMRRKLPSIPTHQEAVLLPSSKK-----RSYSPLRQTSLDGMLSR---VSNLML----PRPSASETNLRKVSLGVDPVPRPGSALGLLQASSVVSSSGMRTATSGMTGATSVYSSPLAELASCLPPDLRHLLNTPGMADSIACGKQLPTYMHNLKEQLRDEIR-------ATTS--------------DRRRLPGLMDKDREARLRRERDKFEALRDPLKRLDVQRKLASPV----IGRSRKLRGHRRQLSDPKIHPPFSPIKEDGSLESDYDRRYLHPSLKPPYKAYEYESIDDVGWRAEWDPSQSYL-TSSYAAAGGALRETAINS 365
BLAST of lrr domain-containing protein vs. nr
Match: gi|1330921456|gb|PNF37336.1| (hypothetical protein B7P43_G00482 [Cryptotermes secundus]) HSP 1 Score: 130.568 bits (327), Expect = 5.544e-29 Identity = 136/359 (37.88%), Postives = 178/359 (49.58%), Query Frame = 0 Query: 102 GTPVGTP------------DTLSEAGSFKS-RTRRTLPYLPL-EEPAPLPSEKKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMN-DHMNRPGSALGLLQASTVVSS-------KGPTSQTREHEKRILE--SILPPDLRHLVRGGS-----------PGTIQQMKMKLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFGLSGAQSD-RIRLEMQRYATMRDPRLRAEMKHKL-NPVLDAQLNRNRRTRGHRRNLSDPR----FSTSLTDSLGDED-----LHFSRPYSSLARDYDPLSD---SMGLDQSRSYLGGSALDGITGGLRDTAINS 411 GTPVGTP DTLSE S KS R RR LP +P +E LPS KK R+++ LRQ+SLDG+ R +N PR S+SETNLRK+++ D + RPGSALGLLQAS+VVSS G T T + + E S LPPDLRHL+ P + +K +L DE+R ATT+ RL GL + R+R E ++ +RDP R +++ KL +PV + R+R+ RGHRR LSDP+ FS D + D LH S A +Y+ + D D S+SYL S+ G LR+TAINS Sbjct: 45 GTPVGTPRGSRDTGGGDSSDTLSETDSQKSLRMRRKLPSIPTHQEAVLLPSSKK-----RSYSPLRQTSLDGMLSR---VSNLML----PRPSASETNLRKVSLGVDPVPRPGSALGLLQASSVVSSSGMRTATSGMTGATSVYSSPLAELASCLPPDLRHLLNTPGMADSIACGKQLPTYMHNLKEQLRDEIR-------ATTS--------------DRRRLPGLMDKDREARLRRERDKFEALRDPLKRLDVQRKLASPV----IGRSRKLRGHRRQLSDPKIHPPFSPIKEDGSLESDYDRRYLHPSLKPPYKAYEYESIDDVGWRAEWDPSQSYL-TSSYAAAGGALRETAINS 365
BLAST of lrr domain-containing protein vs. nr
Match: gi|1227968090|ref|XP_021915392.1| (uncharacterized protein LOC110827755 isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 114.005 bits (284), Expect = 2.934e-23 Identity = 141/375 (37.60%), Postives = 191/375 (50.93%), Query Frame = 0 Query: 102 GTPVGTP-----------DTLSEAGSFKS-RTRRTLPYLP-LEEPAPLPSEKKHRDKMRAFANLRQSSLDGLTGRGYRSANSGFYGSRPRASSSETNLRKLAMN-DHMNRPGSALGLLQASTVVSSKGPTSQTREHEKRI---------LESILPPDLRHLVR-GGSPGTIQQMKM------KLEDELRKPLESIAATTTAAANGTEAEMARKKAEARLFG-LSGAQSDRIRLEMQRYATMRDPRLRAEMKHKL-NPVLDAQLNRNRRTRGHRRNLSDPR----FSTSLTDSLGDED--------LHFSRPYSSLARDYDPLSDSMG----LDQSRSYLGGSALDGITGGLRDTAINSHDLDDTSRNRYLASLRF 428 GTPVGTP DTLSE S KS R RR LP +P +E LPS K+ R+++ LRQ+SLDG+ R ++N PR S+SETNLRK+++ D + RPGSALGLLQ S+VVSS G + + L S LPPDLRHL+ G P +I K L+++LR ++S + RL G + + R R E ++ +RDP R +++ KL +PV + R+R+ RGHRR LSDP+ FS DS + D LH S A +Y+ + D MG LD S+SYL S+ G LR+TAINS LD+ +RYL+S R+ Sbjct: 681 GTPVGTPRGSRDTGGDSSDTLSETDSQKSLRMRRKLPSIPSHQEAISLPSSKR-----RSYSPLRQTSLDGMLPR---TSNLML----PRPSASETNLRKISLGVDPVPRPGSALGLLQGSSVVSSSGARTTSSGMTSTTSVYSTPLADLASCLPPDLRHLLNTSGVPDSIPYGKQLPTYMRNLKEQLRDEIKSATSD-----------------RRRLLGFMDKEREARQRRERDKFEALRDPMKRLDVQRKLASPV----MGRSRKIRGHRRQLSDPKIHLPFSPIKEDSSLESDYDRGYLGYLHPSLKPPYKAYEYESI-DDMGWRAELDPSQSYL-ASSYAAAGGALRETAINS-VLDE---DRYLSSSRY 1016 The following BLAST results are available for this feature:
BLAST of lrr domain-containing protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of lrr domain-containing protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of lrr domain-containing protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1224_size54636:10323..13280+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1224_size54636-snap-gene-0.11 ID=maker-scaffold1224_size54636-snap-gene-0.11|Name=lrr domain-containing protein|organism=Tigriopus kingsejongensis|type=gene|length=2958bp|location=Sequence derived from alignment at scaffold1224_size54636:10323..13280+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'lrr domain-containing protein' has the following synonyms
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