tar dna-binding protein 43, maker-scaffold129_size324999-snap-gene-1.19 (gene) Tigriopus kingsejongensis

Overview


Name	tar dna-binding protein 43
Unique Name	maker-scaffold129_size324999-snap-gene-1.19
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Match: EMLSAG00000012034 (supercontig:LSalAtl2s:LSalAtl2s858:196241:197383:1 gene:EMLSAG00000012034 transcript:EMLSAT00000012034 description:"augustus_masked-LSalAtl2s858-processed-gene-2.3")

HSP 1 Score: 187.963 bits (476), Expect = 4.088e-59
Identity = 101/220 (45.91%), Postives = 132/220 (60.00%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPK---------------------------ADKRKSEDHQ--ESSTAKNKKLEKN--------KCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS ++ V +EEGDEPIE+P+E D+T+LLT+L+AQFPG  GLKFRNPET+  RGVR  + +LYPP + GW    Y+ V P+                           A KRKSE+    +  ++KN K E          K  DLIVLGL W+T EP++R+YFE FGE+ + Q+K  + T QSKGF FIRF     Q +V   RH I+ RWCDVKIP+S+
Sbjct:    1 MSEWVAVVQEEGDEPIEIPTEIDSTILLTSLTAQFPGVTGLKFRNPETNGLRGVRCLDNQLYPPLEDGWSNITYICVHPRYHPIKVSHNGSIQRIHEDSNTQATQDAALKRKSENDGGIDGMSSKNIKFEDMEEGGGNSPKPCDLIVLGLHWQTAEPDIRKYFEQFGELALVQLKTKMGTNQSKGFAFIRFVDPSIQFKVTLTRHWINDRWCDVKIPDSQ 220

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BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Match: EMLSAG00000007356 (supercontig:LSalAtl2s:LSalAtl2s418:127995:128853:-1 gene:EMLSAG00000007356 transcript:EMLSAT00000007356 description:"snap_masked-LSalAtl2s418-processed-gene-1.5")

HSP 1 Score: 61.2326 bits (147), Expect = 4.050e-12
Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = 0

Query:  108 LIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            + V GL W+T E +L+EYF  FGE+  A +K +  TG+S+ F F+ F   ES  +VL   H I+ +  DVK   +K
Sbjct:   13 IFVGGLCWETGEVQLKEYFSQFGEIESANLKLNSVTGKSRCFAFVLFKDTESVSKVLQNTHAINSKKVDVKRAKAK 88

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BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Match: EMLSAG00000012985 (supercontig:LSalAtl2s:LSalAtl2s98:287705:288759:1 gene:EMLSAG00000012985 transcript:EMLSAT00000012985 description:"maker-LSalAtl2s98-snap-gene-3.11")

HSP 1 Score: 61.2326 bits (147), Expect = 4.860e-12
Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = 0

Query:  108 LIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            L V GLP + +E +L+EYFE +G V    +K D  TG+S+GF F+ F + ES   VL Q H++ G+    K   +K
Sbjct:   19 LFVGGLPQEASENDLKEYFEAYGSVTSTVLKMDQMTGRSRGFAFVVFATPESLESVLEQEHVVKGKKVACKKATAK 94

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BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Match: EMLSAG00000006441 (supercontig:LSalAtl2s:LSalAtl2s351:658541:663148:1 gene:EMLSAG00000006441 transcript:EMLSAT00000006441 description:"maker-LSalAtl2s351-snap-gene-6.33")

HSP 1 Score: 58.9214 bits (141), Expect = 6.622e-11
Identity = 34/89 (38.20%), Postives = 48/89 (53.93%), Query Frame = 0

Query:   96 KNKKLEKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQ-RHMIDGRWCDVKIPNSK 183
            K +  E  +   L V GL W TT+  L  YF  FGEV+   V K+ ++G+S+GFGF+ F    +   VL+   H +DGR  D K  N +
Sbjct:   31 KQRAHEDEEQGKLFVGGLSWDTTQETLLRYFGGFGEVIDCVVMKNAESGRSRGFGFVTFSDPANIDAVLSSCPHTLDGRTIDPKACNPR 119

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BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Match: EMLSAG00000008938 (supercontig:LSalAtl2s:LSalAtl2s556:241652:266229:-1 gene:EMLSAG00000008938 transcript:EMLSAT00000008938 description:"maker-LSalAtl2s556-snap-gene-2.16")

HSP 1 Score: 58.151 bits (139), Expect = 9.455e-11
Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 0

Query:  108 LIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRH-MIDGRWCDVKI 179
            L V GLP+ TT+  LRE+FE FGE+  A V  D  TG+S+G+GF+   + +   R   + + +IDGR  +V +
Sbjct:   54 LFVGGLPYHTTDKSLREHFEVFGEIEEAVVITDRTTGKSRGYGFVIMQNKDDAERACKEPNPIIDGRKXNVNL 126

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BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Match: EMLSAG00000007863 (supercontig:LSalAtl2s:LSalAtl2s460:94042:141135:-1 gene:EMLSAG00000007863 transcript:EMLSAT00000007863 description:"maker-LSalAtl2s460-augustus-gene-1.7")

HSP 1 Score: 55.4546 bits (132), Expect = 1.110e-9
Identity = 37/97 (38.14%), Postives = 50/97 (51.55%), Query Frame = 0

Query:   90 QESSTAKNKKLEKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLA-QRHMIDGRWCDVK--IPNSK 183
            Q  S+ ++     +    L V GL W+TT  +LREYF  FG V          T +S+GFGFI F + ++  RVLA   H +DG+  D K   P SK
Sbjct:   35 QTGSSGRSTPSSDSSPGKLFVGGLSWQTTPDKLREYFGQFGSV----------TDRSRGFGFITFSTPDAVDRVLAVVTHTLDGKKIDPKHATPKSK 121

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BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Match: EMLSAG00000008061 (supercontig:LSalAtl2s:LSalAtl2s47:228294:229145:-1 gene:EMLSAG00000008061 transcript:EMLSAT00000008061 description:"augustus_masked-LSalAtl2s47-processed-gene-2.0")

HSP 1 Score: 51.9878 bits (123), Expect = 1.246e-8
Identity = 23/61 (37.70%), Postives = 37/61 (60.66%), Query Frame = 0

Query:  108 LIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRH 168
            L V GLP    + +++E+FE FGE+    +K D +TG+S+GF F+ F S E   + ++  H
Sbjct:   26 LFVGGLPQDAKDCDIKEHFEGFGEIESINIKTDPQTGRSRGFAFVVFKSLEGLEKAVSAEH 86

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BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Match: EMLSAG00000003333 (supercontig:LSalAtl2s:LSalAtl2s182:509525:511178:-1 gene:EMLSAG00000003333 transcript:EMLSAT00000003333 description:"maker-LSalAtl2s182-augustus-gene-5.31")

HSP 1 Score: 51.9878 bits (123), Expect = 1.602e-8
Identity = 40/145 (27.59%), Postives = 70/145 (48.28%), Query Frame = 0

Query:   23 DATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLP-KADKRKSEDHQESSTAKNKKLEKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQ 166
            D  L++   + +F G   ++FR+ E+  +  + L   +L           + V V P +A+K +  ++ ES+    +   K     L +  L +  TE  LR  FEPFG+++  Q+  D  TG+SKG+GF+ +   E   + L Q
Sbjct:  167 DVKLIICNKTRRFKGIAYVEFRDLESIPY-ALGLNGQKL---------CGVPVIVQPSQAEKNRVGNYNESAGKPERGPMK-----LYIGSLHFDITEEMLRGIFEPFGKIMSIQLMMDTDTGRSKGYGFLTYAEAEDAKKALEQ 296

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BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Match: EMLSAG00000006940 (supercontig:LSalAtl2s:LSalAtl2s393:593053:595744:-1 gene:EMLSAG00000006940 transcript:EMLSAT00000006940 description:"maker-LSalAtl2s393-snap-gene-5.57")

HSP 1 Score: 51.6026 bits (122), Expect = 1.689e-8
Identity = 26/63 (41.27%), Postives = 36/63 (57.14%), Query Frame = 0

Query:  103 NKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLA 165
            N    + + GL W+TT   +REYF  FG++    V KD  T +S+GFGFI F   E+  +VL 
Sbjct:   26 NDPGKMFIGGLSWQTTPEXIREYFSQFGDLAEVMVMKDPATRRSRGFGFITFCEPEAVDKVLG 88

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BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Match: EMLSAG00000005517 (supercontig:LSalAtl2s:LSalAtl2s297:281209:289703:-1 gene:EMLSAG00000005517 transcript:EMLSAT00000005517 description:"maker-LSalAtl2s297-augustus-gene-3.62")

HSP 1 Score: 48.521 bits (114), Expect = 3.472e-7
Identity = 26/79 (32.91%), Postives = 45/79 (56.96%), Query Frame = 0

Query:  101 EKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQ-RHMIDGRWCDVK 178
            E+++  DL V  L   TTE +L+ YF  FG +   ++    + G++K FGF+ F S +   ++L   RH IDG+  +++
Sbjct:   17 EESEVMDLFVGNLSLYTTEFKLQTYFSTFGTLTSVKICTHPENGKNKRFGFLNFESADVISKILNYPRHEIDGKILEIR 95

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BLAST of tar dna-binding protein 43 vs. SwissProt
Match: gi|20140568|sp|Q13148.1|TADBP_HUMAN (RecName: Full=TAR DNA-binding protein 43; Short=TDP-43)

HSP 1 Score: 249.595 bits (636), Expect = 2.926e-81
Identity = 117/183 (63.93%), Postives = 144/183 (78.69%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLEKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS YI V E+E DEPIE+PSE+D T+LL+T++AQFPGACGL++RNP +   RGVRL EG L+ P D GWG  +YV   PK +KRK ++   SS  K K+  + K SDLIVLGLPWKTTE +L+EYF  FGEVLM QVKKD+KTG SKGFGF+RF  YE+Q++V++QRHMIDGRWCD K+PNSK
Sbjct:    1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGILHAP-DAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQ-KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181

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BLAST of tar dna-binding protein 43 vs. SwissProt
Match: gi|75070499|sp|Q5R5W2.1|TADBP_PONAB (RecName: Full=TAR DNA-binding protein 43; Short=TDP-43)

HSP 1 Score: 249.595 bits (636), Expect = 3.556e-81
Identity = 117/183 (63.93%), Postives = 144/183 (78.69%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLEKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS YI V E+E DEPIE+PSE+D T+LL+T++AQFPGACGL++RNP +   RGVRL EG L+ P D GWG  +YV   PK +KRK ++   SS  K K+  + K SDLIVLGLPWKTTE +L+EYF  FGEVLM QVKKD+KTG SKGFGF+RF  YE+Q++V++QRHMIDGRWCD K+PNSK
Sbjct:    1 MSEYIRVTEDESDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGILHAP-DAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQ-KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181

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BLAST of tar dna-binding protein 43 vs. SwissProt
Match: gi|20140642|sp|Q921F2.1|TADBP_MOUSE (RecName: Full=TAR DNA-binding protein 43; Short=TDP-43)

HSP 1 Score: 247.284 bits (630), Expect = 2.245e-80
Identity = 116/183 (63.39%), Postives = 144/183 (78.69%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLEKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS YI V E+E DEPIE+PSE+D T+LL+T++AQFPGACGL++RNP +   RGVRL EG L+ P D GWG  +YV   PK +KRK ++   SS  K K+  + K SDLIVLGLPWKTTE +L++YF  FGEVLM QVKKD+KTG SKGFGF+RF  YE+Q++V++QRHMIDGRWCD K+PNSK
Sbjct:    1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGILHAP-DAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQ-KTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181

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BLAST of tar dna-binding protein 43 vs. SwissProt
Match: gi|82233907|sp|Q5ZLN5.1|TADBP_CHICK (RecName: Full=TAR DNA-binding protein 43; Short=TDP-43)

HSP 1 Score: 243.817 bits (621), Expect = 4.716e-79
Identity = 116/183 (63.39%), Postives = 143/183 (78.14%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLEKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS YI V E+E DEPIE+PSE+D T+LL+T++AQFPGACGL++RNP +    GVRL EG L+ P + GWG  +YV   PK +KRK ++   SS  K K+  + K SDLIVLGLPWKTTE +L+EYF  FGEVLM QVKKDIKTG SKGFGF+RF  YE+Q++V++QRHMIDGRWCD K+PNSK
Sbjct:    1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMWGVRLVEGILHAP-EAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQ-KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQVKVMSQRHMIDGRWCDCKLPNSK 181

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BLAST of tar dna-binding protein 43 vs. SwissProt
Match: gi|123915948|sp|Q28F51.1|TADBP_XENTR (RecName: Full=TAR DNA-binding protein 43; Short=TDP-43)

HSP 1 Score: 238.424 bits (607), Expect = 5.314e-77
Identity = 111/180 (61.67%), Postives = 140/180 (77.78%), Query Frame = 0

Query:    4 YITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLEKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            YI VAE+E +EP+E+PSE+D T+LL+T++AQFPGACGL++RNP     RGVRL EG L+ P + GWG  +YV   PK +KRK ++   SS  K K+    K SDLIVLGLPWKTTE +L++YF  FGEV+M QVKKD KTG SKGFGF+RF  YE+Q++V++QRHMIDGRWCD K+PNSK
Sbjct:    5 YIRVAEDENEEPMEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVNQCMRGVRLVEGILHAP-ENGWGNLVYVVNYPKDNKRKMDETDASSAVKIKRA-VTKTSDLIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKKDAKTGHSKGFGFVRFADYETQVKVMSQRHMIDGRWCDCKLPNSK 182

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BLAST of tar dna-binding protein 43 vs. SwissProt
Match: gi|857338755|sp|D0VWM8.1|TADBP_CAEEL (RecName: Full=Tar DNA-binding protein homolog 1)

HSP 1 Score: 137.502 bits (345), Expect = 7.391e-38
Identity = 80/207 (38.65%), Postives = 123/207 (59.42%), Query Frame = 0

Query:    4 YITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEG--RLYPPADTGW-GTSIYVSVLPKADKRKSEDHQESSTAKNKKL-----------------------EKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLA-QRHMIDGRWCDVKIPNSK 183
            +ITV +  GDEPIELP+  D  +L+TTL A FPGA GLK++NP+T + R V++     +L  PAD GW   + +V V P++++ ++    ++++AK +K+                         ++  DLIVLG+ +KTT+   ++YFE  G V+  ++K+    G SKGFGF+R  S   Q +VLA  +HMIDGR CDVK+P+ +
Sbjct:   47 FITVQDPNGDEPIELPTV-DGVVLMTTLQASFPGATGLKYKNPKTGANRAVQVDPSGLKLIAPAD-GWENKTFFVIVAPQSERVRALSSADATSAKRRKVGSSDDSDSDDGRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRK-SDGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGR 250

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BLAST of tar dna-binding protein 43 vs. SwissProt
Match: gi|74676196|sp|O94432.1|YHKF_SCHPO (RecName: Full=Uncharacterized RNA-binding protein C660.15)

HSP 1 Score: 70.8626 bits (172), Expect = 1.385e-13
Identity = 36/93 (38.71%), Postives = 58/93 (62.37%), Query Frame = 0

Query:   86 SEDHQESSTAKNKKLEKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVK 178
            +ED+ E ++  N++  K     + + GL W+TT+  LR+YFE FGEVL   V +D  TG+S+GFGF+ F + +    V+++ H +DG+  D K
Sbjct:  148 NEDNAEETSPFNREDGK-----MFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPK 235

HSP 2 Score: 52.373 bits (124), Expect = 4.043e-7
Identity = 27/79 (34.18%), Postives = 45/79 (56.96%), Query Frame = 0

Query:  101 EKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHM-IDGRWCDVK 178
            E+ K + + V G+P   TE E R +F  FG VL A +  D  TG+ +GFGF+ + +  +    ++Q ++ I G+  +VK
Sbjct:  242 EQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVK 320

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BLAST of tar dna-binding protein 43 vs. SwissProt
Match: gi|729000|sp|Q99020.1|ROAA_MOUSE (RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B; Short=hnRNP A/B; AltName: Full=CArG-binding factor-A; Short=CBF-A)

HSP 1 Score: 66.2402 bits (160), Expect = 4.009e-12
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0

Query:  108 LIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQR-HMIDGRWCDVK 178
            + V GL W T++ +L++YF  FGEV+   +K D  TG+S+GFGFI F    S  +VL Q+ H +DGR  D K
Sbjct:   77 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPK 148

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BLAST of tar dna-binding protein 43 vs. SwissProt
Match: gi|2500574|sp|Q99383.1|HRP1_YEAST (RecName: Full=Nuclear polyadenylated RNA-binding protein 4; AltName: Full=Cleavage factor IB; Short=CFIB)

HSP 1 Score: 65.4698 bits (158), Expect = 1.131e-11
Identity = 33/79 (41.77%), Postives = 46/79 (58.23%), Query Frame = 0

Query:  100 LEKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVK 178
            L K  C  + + GL W TTE  LREYF  +G V   ++ KD  TG+S+GFGF+ F    S   V+  +H++DG+  D K
Sbjct:  154 LSKESCK-MFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPK 231

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BLAST of tar dna-binding protein 43 vs. SwissProt
Match: gi|75270351|sp|Q8W034.1|RNP1_ARATH (RecName: Full=Heterogeneous nuclear ribonucleoprotein 1; Short=hnRNP1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.275e-11
Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 0

Query:  108 LIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVK 178
            L V G+ W+T E +LRE+F  +GEV  A V +D  TG+ +GFGF+ F       RVL ++H ID R  DVK
Sbjct:    8 LFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQEKHSIDTREVDVK 78

HSP 2 Score: 51.6026 bits (122), Expect = 6.078e-7
Identity = 28/77 (36.36%), Postives = 42/77 (54.55%), Query Frame = 0

Query:  103 NKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQR-HMIDGRWCDVK 178
            NK   + V GLP   T+ E R+YFE +G V    +  D  T + +GFGF+ F S ++   VL +  H + G+  +VK
Sbjct:  107 NKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183

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BLAST of tar dna-binding protein 43 vs. nr
Match: gi|1339042195|ref|XP_023709120.1| (uncharacterized protein LOC111865378 isoform X1 [Cryptotermes secundus])

HSP 1 Score: 302.753 bits (774), Expect = 2.847e-98
Identity = 141/184 (76.63%), Postives = 164/184 (89.13%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLE-KNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS Y+ VAE+EG+EPIELP+E+D+TLLL+TL+AQFPG CGLK+RNPE+ + RGVRL EGRL+PP ++GWG  +Y  V PK +KRKS+DH E+STAK K++E K KCSDLIVLGLPWKTTE +LREYFE FGEVLMAQVKKD K+GQSKGFGFIRFG+YESQMRVLAQRHMIDGRWCDVKIPNSK
Sbjct:    1 MSSYLQVAEDEGEEPIELPTEDDSTLLLSTLAAQFPGTCGLKYRNPESRAMRGVRLVEGRLHPP-ESGWGNCVYYCVFPKENKRKSDDHLENSTAKTKRMETKLKCSDLIVLGLPWKTTEQQLREYFESFGEVLMAQVKKDPKSGQSKGFGFIRFGTYESQMRVLAQRHMIDGRWCDVKIPNSK 183

[Close]

BLAST of tar dna-binding protein 43 vs. nr
Match: gi|954572453|ref|XP_014610473.1| (PREDICTED: uncharacterized protein LOC106790228 isoform X2 [Polistes canadensis])

HSP 1 Score: 300.827 bits (769), Expect = 3.523e-98
Identity = 139/184 (75.54%), Postives = 162/184 (88.04%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLE-KNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            M+ YI VAE+EG+EPIELP+E+D+TLLLTTLSAQFPG CGLK+RNPE+ + RGVRL EGRL+PP + GWG ++Y  V PK +KRKS+DH E+STAK K++E K +C+DLIVLGLPWKTTE  LREYFE FGEVLMAQVKKD K+GQSKGFGFIRFGSYESQ+R LAQRHMIDGRWCDVK+PNSK
Sbjct:    1 MTSYIQVAEDEGEEPIELPTEDDSTLLLTTLSAQFPGTCGLKYRNPESRTMRGVRLVEGRLHPP-ENGWGKAVYFCVFPKENKRKSDDHLENSTAKTKRMETKLRCTDLIVLGLPWKTTEQNLREYFEAFGEVLMAQVKKDAKSGQSKGFGFIRFGSYESQLRCLAQRHMIDGRWCDVKVPNSK 183

[Close]

BLAST of tar dna-binding protein 43 vs. nr
Match: gi|1227967204|ref|XP_021914942.1| (uncharacterized protein LOC110827530 isoform X1 [Zootermopsis nevadensis])

HSP 1 Score: 301.982 bits (772), Expect = 6.649e-98
Identity = 141/184 (76.63%), Postives = 163/184 (88.59%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLE-KNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS Y+ VAE+EG+EPIELP+E+D+TLLL+TL+AQFPG CGLK+RNPE+ + RGVRL EGRL+PP + GWG  +Y  V PK +KRKS+DH E+STAK K++E K KCSDLIVLGLPWKTTE +LREYFE FGEVLMAQVKKD K+GQSKGFGFIRFG+YESQMRVLAQRHMIDGRWCDVKIPNSK
Sbjct:    1 MSSYLQVAEDEGEEPIELPTEDDSTLLLSTLAAQFPGTCGLKYRNPESRAMRGVRLVEGRLHPP-ENGWGNCVYYCVFPKENKRKSDDHLENSTAKTKRMETKLKCSDLIVLGLPWKTTEQQLREYFESFGEVLMAQVKKDPKSGQSKGFGFIRFGTYESQMRVLAQRHMIDGRWCDVKIPNSK 183

[Close]

BLAST of tar dna-binding protein 43 vs. nr
Match: gi|972192784|ref|XP_015178170.1| (PREDICTED: uncharacterized protein LOC107067303 isoform X2 [Polistes dominula])

HSP 1 Score: 298.516 bits (763), Expect = 3.199e-97
Identity = 138/184 (75.00%), Postives = 161/184 (87.50%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLE-KNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            M+ YI VAE+EG+EPIELP+E+D+TLLLTTLSAQFPG CGLK+RNPE+ + RGVRL EGRL+PP + GWG ++Y  V PK +KRKS+DH E+STAK K++E K +C+DLIVLGLPWKTTE  LREYFE FGEVLMAQVKKD K+GQSKGFGFIRF SYESQ+R LAQRHMIDGRWCDVK+PNSK
Sbjct:    1 MTSYIQVAEDEGEEPIELPTEDDSTLLLTTLSAQFPGTCGLKYRNPESRTMRGVRLVEGRLHPP-ENGWGKAVYFCVFPKENKRKSDDHLENSTAKTKRMETKLRCTDLIVLGLPWKTTEQNLREYFEAFGEVLMAQVKKDAKSGQSKGFGFIRFASYESQLRCLAQRHMIDGRWCDVKVPNSK 183

[Close]

BLAST of tar dna-binding protein 43 vs. nr
Match: gi|954572451|ref|XP_014610472.1| (PREDICTED: TAR DNA-binding protein 43-like isoform X1 [Polistes canadensis])

HSP 1 Score: 298.13 bits (762), Expect = 4.752e-97
Identity = 139/184 (75.54%), Postives = 162/184 (88.04%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLE-KNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            M+ YI VAE+EG+EPIELP+E+D+TLLLTTLSAQFPG CGLK+RNPE+ + RGVRL EGRL+PP + GWG ++Y  V PK +KRKS+DH E+STAK K++E K +C+DLIVLGLPWKTTE  LREYFE FGEVLMAQVKKD K+GQSKGFGFIRFGSYESQ+R LAQRHMIDGRWCDVK+PNSK
Sbjct:    1 MTSYIQVAEDEGEEPIELPTEDDSTLLLTTLSAQFPGTCGLKYRNPESRTMRGVRLVEGRLHPP-ENGWGKAVYFCVFPKENKRKSDDHLENSTAKTKRMETKLRCTDLIVLGLPWKTTEQNLREYFEAFGEVLMAQVKKDAKSGQSKGFGFIRFGSYESQLRCLAQRHMIDGRWCDVKVPNSK 183

[Close]

BLAST of tar dna-binding protein 43 vs. nr
Match: gi|808148048|ref|XP_012175064.1| (uncharacterized protein LOC100646812 isoform X2 [Bombus terrestris])

HSP 1 Score: 297.36 bits (760), Expect = 8.660e-97
Identity = 137/184 (74.46%), Postives = 162/184 (88.04%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLE-KNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS YI VAE+EGDEPIELP+E+D+TLLLTT++AQFPG CGLK+RNPE+ + RG+RL +GRL+PP + GWG +IY  V PK +KRKS+D+ E+STAK K++E K +C+DLIVLGLPWKTTE  LREYFE FGEVLMAQVKKD K+GQSKGFGFIRFGSYESQ+R LAQRHMIDGRWCDVK+PNSK
Sbjct:    1 MSSYIQVAEDEGDEPIELPTEDDSTLLLTTVTAQFPGTCGLKYRNPESRTMRGIRLVDGRLHPP-ENGWGKAIYFCVFPKENKRKSDDNLENSTAKTKRMETKLRCTDLIVLGLPWKTTEQNLREYFETFGEVLMAQVKKDAKSGQSKGFGFIRFGSYESQLRCLAQRHMIDGRWCDVKVPNSK 183

[Close]

BLAST of tar dna-binding protein 43 vs. nr
Match: gi|1339042197|ref|XP_023709121.1| (TAR DNA-binding protein 43 isoform X2 [Cryptotermes secundus] >gi|1330910688|gb|PNF32092.1| TAR DNA-binding protein 43 [Cryptotermes secundus])

HSP 1 Score: 298.13 bits (762), Expect = 9.650e-97
Identity = 141/184 (76.63%), Postives = 164/184 (89.13%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLE-KNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS Y+ VAE+EG+EPIELP+E+D+TLLL+TL+AQFPG CGLK+RNPE+ + RGVRL EGRL+PP ++GWG  +Y  V PK +KRKS+DH E+STAK K++E K KCSDLIVLGLPWKTTE +LREYFE FGEVLMAQVKKD K+GQSKGFGFIRFG+YESQMRVLAQRHMIDGRWCDVKIPNSK
Sbjct:    1 MSSYLQVAEDEGEEPIELPTEDDSTLLLSTLAAQFPGTCGLKYRNPESRAMRGVRLVEGRLHPP-ESGWGNCVYYCVFPKENKRKSDDHLENSTAKTKRMETKLKCSDLIVLGLPWKTTEQQLREYFESFGEVLMAQVKKDPKSGQSKGFGFIRFGTYESQMRVLAQRHMIDGRWCDVKIPNSK 183

[Close]

BLAST of tar dna-binding protein 43 vs. nr
Match: gi|925674599|gb|KOX72027.1| (TAR DNA-binding protein 43 [Melipona quadrifasciata])

HSP 1 Score: 297.36 bits (760), Expect = 1.096e-96
Identity = 137/184 (74.46%), Postives = 162/184 (88.04%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLE-KNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS YI VAE+EGDEPIELP+E+D+TLLLTT++AQFPG CGLK+RNPE+ + RG+RL +GRL+PP + GWG +IY  V PK +KRKS+D+ E+STAK K++E K +C+DLIVLGLPWKTTE  LREYFE FGEVLMAQVKKD K+GQSKGFGFIRFGSYESQ+R LAQRHMIDGRWCDVK+PNSK
Sbjct:    1 MSSYIQVAEDEGDEPIELPTEDDSTLLLTTVTAQFPGTCGLKYRNPESRTMRGIRLVDGRLHPP-ENGWGKAIYFCVFPKENKRKSDDNLENSTAKTKRMETKLRCTDLIVLGLPWKTTEQNLREYFETFGEVLMAQVKKDAKSGQSKGFGFIRFGSYESQLRCLAQRHMIDGRWCDVKVPNSK 183

[Close]

BLAST of tar dna-binding protein 43 vs. nr
Match: gi|815910537|ref|XP_012240811.1| (uncharacterized protein LOC100742833 isoform X2 [Bombus impatiens])

HSP 1 Score: 296.975 bits (759), Expect = 1.112e-96
Identity = 137/184 (74.46%), Postives = 162/184 (88.04%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLE-KNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS YI VAE+EGDEPIELP+E+D+TLLLTT++AQFPG CGLK+RNPE+ + RG+RL +GRL+PP + GWG +IY  V PK +KRKS+D+ E+STAK K++E K +C+DLIVLGLPWKTTE  LREYFE FGEVLMAQVKKD K+GQSKGFGFIRFGSYESQ+R LAQRHMIDGRWCDVK+PNSK
Sbjct:    1 MSSYIQVAEDEGDEPIELPTEDDSTLLLTTVTAQFPGTCGLKYRNPESRTMRGIRLVDGRLHPP-ENGWGKAIYFCVFPKENKRKSDDNLENSTAKTKRMETKLRCTDLIVLGLPWKTTEQNLREYFETFGEVLMAQVKKDAKSGQSKGFGFIRFGSYESQLRCLAQRHMIDGRWCDVKVPNSK 183

[Close]

BLAST of tar dna-binding protein 43 vs. nr
Match: gi|1227967206|ref|XP_021914944.1| (TAR DNA-binding protein 43 isoform X2 [Zootermopsis nevadensis] >gi|646719987|gb|KDR21878.1| TAR DNA-binding protein 43 [Zootermopsis nevadensis])

HSP 1 Score: 298.13 bits (762), Expect = 1.135e-96
Identity = 141/184 (76.63%), Postives = 163/184 (88.59%), Query Frame = 0

Query:    1 MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHSWRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKLE-KNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFGFIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK 183
            MS Y+ VAE+EG+EPIELP+E+D+TLLL+TL+AQFPG CGLK+RNPE+ + RGVRL EGRL+PP + GWG  +Y  V PK +KRKS+DH E+STAK K++E K KCSDLIVLGLPWKTTE +LREYFE FGEVLMAQVKKD K+GQSKGFGFIRFG+YESQMRVLAQRHMIDGRWCDVKIPNSK
Sbjct:    1 MSSYLQVAEDEGEEPIELPTEDDSTLLLSTLAAQFPGTCGLKYRNPESRAMRGVRLVEGRLHPP-ENGWGNCVYYCVFPKENKRKSDDHLENSTAKTKRMETKLKCSDLIVLGLPWKTTEQQLREYFESFGEVLMAQVKKDPKSGQSKGFGFIRFGTYESQMRVLAQRHMIDGRWCDVKIPNSK 183

The following BLAST results are available for this feature:

BLAST of tar dna-binding protein 43 vs. L. salmonis genes
BLAST of tar dna-binding protein 43 vs. SwissProt
BLAST of tar dna-binding protein 43 vs. nr

BLAST of tar dna-binding protein 43 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 10


Match Name	E-value	Identity	Description
EMLSAG00000012034	4.088e-59	45.91	supercontig:LSalAtl2s:LSalAtl2s858:196241:197383:1...	[more]
EMLSAG00000007356	4.050e-12	40.79	supercontig:LSalAtl2s:LSalAtl2s418:127995:128853:-...	[more]
EMLSAG00000012985	4.860e-12	40.79	supercontig:LSalAtl2s:LSalAtl2s98:287705:288759:1 ...	[more]
EMLSAG00000006441	6.622e-11	38.20	supercontig:LSalAtl2s:LSalAtl2s351:658541:663148:1...	[more]
EMLSAG00000008938	9.455e-11	41.10	supercontig:LSalAtl2s:LSalAtl2s556:241652:266229:-...	[more]
EMLSAG00000007863	1.110e-9	38.14	supercontig:LSalAtl2s:LSalAtl2s460:94042:141135:-1...	[more]
EMLSAG00000008061	1.246e-8	37.70	supercontig:LSalAtl2s:LSalAtl2s47:228294:229145:-1...	[more]
EMLSAG00000003333	1.602e-8	27.59	supercontig:LSalAtl2s:LSalAtl2s182:509525:511178:-...	[more]
EMLSAG00000006940	1.689e-8	41.27	supercontig:LSalAtl2s:LSalAtl2s393:593053:595744:-...	[more]
EMLSAG00000005517	3.472e-7	32.91	supercontig:LSalAtl2s:LSalAtl2s297:281209:289703:-...	[more]

BLAST of tar dna-binding protein 43 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|20140568\|sp\|Q13148.1\|TADBP_HUMAN	2.926e-81	63.93	RecName: Full=TAR DNA-binding protein 43; Short=TD...	[more]
gi\|75070499\|sp\|Q5R5W2.1\|TADBP_PONAB	3.556e-81	63.93	RecName: Full=TAR DNA-binding protein 43; Short=TD...	[more]
gi\|20140642\|sp\|Q921F2.1\|TADBP_MOUSE	2.245e-80	63.39	RecName: Full=TAR DNA-binding protein 43; Short=TD...	[more]
gi\|82233907\|sp\|Q5ZLN5.1\|TADBP_CHICK	4.716e-79	63.39	RecName: Full=TAR DNA-binding protein 43; Short=TD...	[more]
gi\|123915948\|sp\|Q28F51.1\|TADBP_XENTR	5.314e-77	61.67	RecName: Full=TAR DNA-binding protein 43; Short=TD...	[more]
gi\|857338755\|sp\|D0VWM8.1\|TADBP_CAEEL	7.391e-38	38.65	RecName: Full=Tar DNA-binding protein homolog 1	[more]
gi\|74676196\|sp\|O94432.1\|YHKF_SCHPO	1.385e-13	38.71	RecName: Full=Uncharacterized RNA-binding protein ...	[more]
gi\|729000\|sp\|Q99020.1\|ROAA_MOUSE	4.009e-12	45.83	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]
gi\|2500574\|sp\|Q99383.1\|HRP1_YEAST	1.131e-11	41.77	RecName: Full=Nuclear polyadenylated RNA-binding p...	[more]
gi\|75270351\|sp\|Q8W034.1\|RNP1_ARATH	1.275e-11	46.48	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]

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BLAST of tar dna-binding protein 43 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1339042195\|ref\|XP_023709120.1\|	2.847e-98	76.63	uncharacterized protein LOC111865378 isoform X1 [C...	[more]
gi\|954572453\|ref\|XP_014610473.1\|	3.523e-98	75.54	PREDICTED: uncharacterized protein LOC106790228 is...	[more]
gi\|1227967204\|ref\|XP_021914942.1\|	6.649e-98	76.63	uncharacterized protein LOC110827530 isoform X1 [Z...	[more]
gi\|972192784\|ref\|XP_015178170.1\|	3.199e-97	75.00	PREDICTED: uncharacterized protein LOC107067303 is...	[more]
gi\|954572451\|ref\|XP_014610472.1\|	4.752e-97	75.54	PREDICTED: TAR DNA-binding protein 43-like isoform...	[more]
gi\|808148048\|ref\|XP_012175064.1\|	8.660e-97	74.46	uncharacterized protein LOC100646812 isoform X2 [B...	[more]
gi\|1339042197\|ref\|XP_023709121.1\|	9.650e-97	76.63	TAR DNA-binding protein 43 isoform X2 [Cryptoterme...	[more]
gi\|925674599\|gb\|KOX72027.1\|	1.096e-96	74.46	TAR DNA-binding protein 43 [Melipona quadrifasciat...	[more]
gi\|815910537\|ref\|XP_012240811.1\|	1.112e-96	74.46	uncharacterized protein LOC100742833 isoform X2 [B...	[more]
gi\|1227967206\|ref\|XP_021914944.1\|	1.135e-96	76.63	TAR DNA-binding protein 43 isoform X2 [Zootermopsi...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold129_size324999	supercontig	scaffold129_size324999:125718..126639 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold129_size324999-snap-gene-1.19-mRNA-1	maker-scaffold129_size324999-snap-gene-1.19-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold129_size324999:125718..126639+

gene from alignment at scaffold129_size324999:125718..126639+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold129_size324999-snap-gene-1.19 ID=maker-scaffold129_size324999-snap-gene-1.19|Name=tar dna-binding protein 43|organism=Tigriopus kingsejongensis|type=gene|length=922bp|location=Sequence derived from alignment at scaffold129_size324999:125718..126639+ (Tigriopus kingsejongensis)
CCAGTGCCACGCCCCTGACCGATGAAGCTGTCCGGGCCCGTGTATGAGTG
TGTCCACGCCCCCAGTGGCAAATTGTGGTGTTAGGCGAGCTCGAACGAGT
GTATAGATGTGCGTGTGAGACCCCAACGTGATACCCGGGACCCGCGATCC
CACTCATTACCAACACCAGCAACACCCGAAAGAACCTCATAGCATCCCTT
GGGCGTGAGGCCCTCACCTCACCATGAGTTGCTACATTACCGTGGCCGAG
GAAGAAGGGGACGAACCCATTGAGCTGCCCTCCGAGGAAGATGCCACCCT
ACTGCTCACCACCCTCTCCGCTCAATTTCCCGGGGCGTGCGGCCTCAAAT
TCAGGAATCCCGAGACCCACTCTTGGCGGGGTGTCCGCCTGGCCGAAGGC
CGGCTTTACCCGCCAGCTGACACGGGTTGGGGCACCTCCATATATGTGTC
CGTGCTCCCTAAAGGTGAGTTCCGGTCTTGAAGCCTAGAGGGGTGGCAGC
TACTCCCAACAGGCTCGAACTCATGACCACGCGCTCTTTTTGCAGCCGAT
AAGCGGAAGTCGGAAGACCACCAAGAAAGCTCCACAGCCAAGAATAAGAA
ACTGGAGAAGAACAAGTGCTCGGATCTGATTGTACTCGGTCTCCCGTGGA
AAACCACCGAGCCCGAGCTCCGCGAGTATTTTGAGCCCTTTGGCGAGGTC
CTCATGGCACAGGTGCGGGCCCGATCTGTCTTAGGATCCAGCACGGTTCA
TTCTCACTAACGCAAGCTTTCTCTCGTCCAGGTTAAGAAGGATATCAAAA
CCGGTCAATCCAAGGGCTTCGGCTTCATTCGCTTTGGCAGCTACGAGTCC
CAGATGCGGGTCCTAGCCCAAAGACACATGATCGATGGCCGATGGTGTGA
TGTCAAAATTCCCAACTCTAAG

Synonyms

The feature 'tar dna-binding protein 43' has the following synonyms


Synonym
Tk10954

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