nuclear cap-binding protein subunit 2, maker-scaffold1340_size46339-snap-gene-0.8 (gene) Tigriopus kingsejongensis

Overview
Namenuclear cap-binding protein subunit 2
Unique Namemaker-scaffold1340_size46339-snap-gene-0.8
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. L. salmonis genes
Match: EMLSAG00000000600 (supercontig:LSalAtl2s:LSalAtl2s109:434479:437086:1 gene:EMLSAG00000000600 transcript:EMLSAT00000000600 description:"maker-LSalAtl2s109-augustus-gene-4.27")

HSP 1 Score: 192.971 bits (489), Expect = 7.040e-65
Identity = 88/114 (77.19%), Postives = 102/114 (89.47%), Query Frame = 0 
Query:    9 YRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
            YRDQHFKGSR +QE+LL  + TLYVGN+SF+TTE QLYELFGKCGD+KRIVMGLDKFKRTPCGF FVE+YGR  SE AM ++N TRLD+R++RTDWD GFIEGRQ+GRGK+GGQ
Sbjct:   17 YRDQHFKGSRGDQEKLLKLSTTLYVGNLSFFTTEGQLYELFGKCGDIKRIVMGLDKFKRTPCGFXFVEYYGREXSENAMRFVNGTRLDDRVVRTDWDAGFIEGRQFGRGKSGGQ 130
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. L. salmonis genes
Match: EMLSAG00000011310 (supercontig:LSalAtl2s:LSalAtl2s77:328780:331049:1 gene:EMLSAG00000011310 transcript:EMLSAT00000011310 description:"maker-LSalAtl2s77-augustus-gene-3.16")

HSP 1 Score: 50.0618 bits (118), Expect = 8.902e-9
Identity = 23/72 (31.94%), Postives = 40/72 (55.56%), Query Frame = 0 
Query:   21 QERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINS 92
            +E++     ++YVGN+ +  T E+L + F  CG + R+ +  +K+   P GF +VEF  +     AMA  +S
Sbjct:   74 EEKMEVDARSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYVEFADKDSVSTAMALDDS 145
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. L. salmonis genes
Match: EMLSAG00000008228 (supercontig:LSalAtl2s:LSalAtl2s496:349997:351002:-1 gene:EMLSAG00000008228 transcript:EMLSAT00000008228 description:"maker-LSalAtl2s496-augustus-gene-3.17")

HSP 1 Score: 45.0542 bits (105), Expect = 7.223e-7
Identity = 23/77 (29.87%), Postives = 37/77 (48.05%), Query Frame = 0 
Query:   28 TCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDW 104
               + V N+S  T E  + ELF   G + RI +  DK      GF F+ +Y + ++  A+A +N    D  I+  +W
Sbjct:  206 NAAIRVSNLSENTQESDVQELFKPFGAIARIFLAKDKQTGQXKGFAFIHYYKKEEAXKAIATLNGYGYDYLILSVEW 282
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Match: gi|259511394|sp|B0W939.1|NCBP2_CULQU (RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20)

HSP 1 Score: 209.534 bits (532), Expect = 6.495e-70
Identity = 93/121 (76.86%), Postives = 106/121 (87.60%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S  LS YRDQHFKGSRHEQERLL  + TLY+GN+SFYTTEEQ++ELF +CGD++RIVMGLDKFK+TPCGFCFVE+Y R DSE AM YIN TRLD+RI+R DWD GF+EGRQYGRGKTGGQ
Sbjct:    7 PSVALSKYRDQHFKGSRHEQERLLRNSSTLYIGNLSFYTTEEQIHELFSRCGDIRRIVMGLDKFKKTPCGFCFVEYYARIDSEYAMRYINGTRLDDRIVRVDWDAGFVEGRQYGRGKTGGQ 127
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Match: gi|259511484|sp|Q7QCB6.3|NCBP2_ANOGA (RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20)

HSP 1 Score: 207.608 bits (527), Expect = 3.398e-69
Identity = 93/121 (76.86%), Postives = 106/121 (87.60%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S  LS YRDQHFKGSRHEQE+LL  + TLYVGN+SFYTTEEQ++ELF +CGDV+RI+MGLDKFK+TPCGFCFVE+Y R D+E AM YIN TRLD+RI+R DWD GFIEGRQYGRGKTGGQ
Sbjct:   11 PSVSLSKYRDQHFKGSRHEQEKLLRVSSTLYVGNLSFYTTEEQIHELFSRCGDVRRIIMGLDKFKKTPCGFCFVEYYSRLDAESAMRYINGTRLDDRIVRVDWDAGFIEGRQYGRGKTGGQ 131
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Match: gi|122106168|sp|Q177H0.1|NCBP2_AEDAE (RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20)

HSP 1 Score: 206.838 bits (525), Expect = 6.144e-69
Identity = 92/121 (76.03%), Postives = 106/121 (87.60%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S  LS YRDQHFKGSRHEQERLL  T TLY+GN+SFYTTEEQ++ELF +CGD++RIVMGLDKFK+TPCGFCFVE+Y R D+E AM YIN TRLD+RI+R DWD GF+EGRQYGRGK+GGQ
Sbjct:    7 PSVALSKYRDQHFKGSRHEQERLLRLTSTLYIGNLSFYTTEEQIHELFSRCGDIRRIVMGLDKFKKTPCGFCFVEYYARDDAESAMRYINGTRLDDRIVRVDWDAGFVEGRQYGRGKSGGQ 127
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Match: gi|259511692|sp|B7P877.1|NCBP2_IXOSC (RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20)

HSP 1 Score: 204.142 bits (518), Expect = 6.216e-68
Identity = 91/120 (75.83%), Postives = 107/120 (89.17%), Query Frame = 0 
Query:    3 STDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
            S DLSSYRDQHFKGSR EQERLL  + TLYVGNMSFYTTEEQ+YELF KCGDVK+++MGLD+F +TPCGFCFVE+Y R D+E A+ Y+N T+LD+RIIRTDWD GF+EGRQ+GRGK+GGQ
Sbjct:    2 SVDLSSYRDQHFKGSRSEQERLLRLSTTLYVGNMSFYTTEEQIYELFSKCGDVKKVIMGLDRFHKTPCGFCFVEYYTREDAENAIRYVNGTKLDDRIIRTDWDAGFVEGRQFGRGKSGGQ 121
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Match: gi|259511689|sp|B4NB54.1|NCBP2_DROWI (RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20)

HSP 1 Score: 202.986 bits (515), Expect = 2.315e-67
Identity = 90/121 (74.38%), Postives = 109/121 (90.08%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
            +S +LSSYRDQHFKGSR EQER L ++CTLYVGN+SFYTTEEQ++ELF +CGDV+ IVMGLDK+K+TPCGFCFVE+Y R+++E AM ++N TRLD+R+IR DWD GFIEGRQYGRGKTGGQ
Sbjct:    3 NSVELSSYRDQHFKGSRSEQERSLKESCTLYVGNLSFYTTEEQIHELFSRCGDVRLIVMGLDKYKKTPCGFCFVEYYTRSEAESAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQ 123
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Match: gi|122119432|sp|Q1HE01.1|NCBP2_BOMMO (RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20)

HSP 1 Score: 202.601 bits (514), Expect = 2.820e-67
Identity = 89/121 (73.55%), Postives = 107/121 (88.43%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
            SS ++SSYRDQHFKGSR EQE+LL  + TLY+GN+SFYTTEEQ+YEL+ +CGD++R++MGLDK+K+TPCGFCFVE+Y R D+E  M YIN TRLD+RIIR DWD GFIEGRQYGRGKTGGQ
Sbjct:    3 SSIEISSYRDQHFKGSRSEQEKLLKASSTLYMGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQ 123
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Match: gi|259511301|sp|B3P0D7.1|NCBP2_DROER (RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20)

HSP 1 Score: 202.601 bits (514), Expect = 2.883e-67
Identity = 91/121 (75.21%), Postives = 108/121 (89.26%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
            +S +LSSYRDQHFKGSR EQER L  +CTLYVGN+SFYTTEEQ++ELF +CGDV+ IVMGLDK+K+TPCGFCFVE+Y RA++E AM ++N TRLD+R+IR DWD GFIEGRQYGRGKTGGQ
Sbjct:    3 ASVELSSYRDQHFKGSRSEQERSLRGSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDKYKKTPCGFCFVEYYVRAEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQ 123
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Match: gi|259511300|sp|B3LYP1.1|NCBP2_DROAN (RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20)

HSP 1 Score: 201.83 bits (512), Expect = 5.444e-67
Identity = 91/121 (75.21%), Postives = 107/121 (88.43%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
            +S DLSSYRDQHFKGSR EQER L  + TLYVGN+SFYTTEEQ++ELF +CGDV+ IVMGLDK+K+TPCGFCFVE+Y RA++E AM ++N TRLD+R+IR DWD GFIEGRQYGRGKTGGQ
Sbjct:    3 TSVDLSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDKYKKTPCGFCFVEYYTRAEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQ 123
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Match: gi|259511490|sp|B4JUT1.1|NCBP2_DROGR (RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20)

HSP 1 Score: 201.83 bits (512), Expect = 6.074e-67
Identity = 91/121 (75.21%), Postives = 107/121 (88.43%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
            +S DLSSYRDQHFKGSR EQER L  + TLYVGN+SFYTTEEQ++ELF +CGDV+ IVMGLDK+K+TPCGFCFVE+Y RA++E AM ++N TRLD+R+IR DWD GFIEGRQYGRGKTGGQ
Sbjct:    3 ASVDLSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRIIVMGLDKYKKTPCGFCFVEYYTRAEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQ 123
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Match: gi|259511690|sp|B4PL68.1|NCBP2_DROYA (RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20)

HSP 1 Score: 201.445 bits (511), Expect = 7.646e-67
Identity = 90/121 (74.38%), Postives = 108/121 (89.26%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
            +S +LSSYRDQHFKGSR EQER L  +CTLYVGN+SFYTTEEQ++ELF +CGDV+ IVMGLDK+K+TPCGFCFVE+Y R+++E AM ++N TRLD+R+IR DWD GFIEGRQYGRGKTGGQ
Sbjct:    3 ASVELSSYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDKYKKTPCGFCFVEYYIRSEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQ 123
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. nr
Match: gi|1233162706|ref|XP_022207484.1| (nuclear cap-binding protein subunit 2 isoform X2 [Nilaparvata lugens])

HSP 1 Score: 213.772 bits (543), Expect = 4.438e-69
Identity = 98/121 (80.99%), Postives = 109/121 (90.08%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S DLSSYRDQHFKGSR EQERLL  +CTLYVGN+SFYTTEEQ+YELF KCGD+KRIVMGLDKFK+TPCGFCFVE+Y R D+E  M YIN+TRLD+RI+RTDWD GFIEGRQYGRGK+GGQ
Sbjct:    9 PSVDLSSYRDQHFKGSRAEQERLLKTSCTLYVGNLSFYTTEEQIYELFSKCGDIKRIVMGLDKFKKTPCGFCFVEYYIREDAENCMRYINATRLDDRIVRTDWDAGFIEGRQYGRGKSGGQ 129
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. nr
Match: gi|1227985117|ref|XP_021924221.1| (nuclear cap-binding protein subunit 2 isoform X1 [Zootermopsis nevadensis] >gi|646712347|gb|KDR17129.1| Nuclear cap-binding protein subunit 2 [Zootermopsis nevadensis])

HSP 1 Score: 213.001 bits (541), Expect = 9.455e-69
Identity = 97/121 (80.17%), Postives = 109/121 (90.08%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S +LSSYRDQHFKGSR EQERLL  + T+Y+GN+SFYTTEEQ+YELF KCGDVKRI+MGLDKFK+TPCGFCFVE+Y RAD+E +M YIN TRLD+RIIRTDWD GFIEGRQYGRGKTGGQ
Sbjct:    7 PSVELSSYRDQHFKGSRGEQERLLRTSTTMYIGNLSFYTTEEQIYELFSKCGDVKRIIMGLDKFKKTPCGFCFVEYYSRADAENSMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQ 127
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. nr
Match: gi|1069679656|ref|XP_018301578.1| (PREDICTED: nuclear cap-binding protein subunit 2 [Trachymyrmex zeteki])

HSP 1 Score: 211.846 bits (538), Expect = 3.088e-68
Identity = 96/121 (79.34%), Postives = 109/121 (90.08%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S +LSSYRDQHFKG+R EQ+RLL  +CTLYVGN+SFYTTEEQ+YELF KCGD++RI+MGLDK+K+TPCGFCFVE+Y RADSE  M YIN TRLD+RIIRTDWD GFIEGRQYGRGKTGGQ
Sbjct:   11 PSVELSSYRDQHFKGTRAEQDRLLRNSCTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDKYKKTPCGFCFVEYYQRADSENCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQ 131
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. nr
Match: gi|746834153|ref|XP_011067287.1| (PREDICTED: nuclear cap-binding protein subunit 2 [Acromyrmex echinatior] >gi|332030010|gb|EGI69835.1| Nuclear cap-binding protein subunit 2 [Acromyrmex echinatior])

HSP 1 Score: 211.46 bits (537), Expect = 3.974e-68
Identity = 94/121 (77.69%), Postives = 109/121 (90.08%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S +LSSYRDQHFKG+R EQ+RLL  +CTLYVGN+SFYTTEEQ+YELF KCGD++RI+MGLDK+K+TPCGFCF+E+Y RAD+E  M YIN TRLD+RIIRTDWD GFIEGRQYGRGKTGGQ
Sbjct:   11 PSVELSSYRDQHFKGTRAEQDRLLRNSCTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDKYKKTPCGFCFIEYYNRADAESCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQ 131
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. nr
Match: gi|1068428787|ref|XP_018058213.1| (PREDICTED: nuclear cap-binding protein subunit 2 [Atta colombica] >gi|1009349959|gb|KYM75465.1| Nuclear cap-binding protein subunit 2 [Atta colombica])

HSP 1 Score: 211.46 bits (537), Expect = 4.152e-68
Identity = 94/121 (77.69%), Postives = 109/121 (90.08%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S +LSSYRDQHFKG+R EQ+RLL  +CTLYVGN+SFYTTEEQ+YELF KCGD++RI+MGLDK+K+TPCGFCF+E+Y RAD+E  M YIN TRLD+RIIRTDWD GFIEGRQYGRGKTGGQ
Sbjct:   11 PSVELSSYRDQHFKGTRAEQDRLLRNSCTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDKYKKTPCGFCFIEYYNRADAESCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQ 131
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. nr
Match: gi|801398195|ref|XP_012059540.1| (PREDICTED: nuclear cap-binding protein subunit 2 [Atta cephalotes])

HSP 1 Score: 211.46 bits (537), Expect = 4.386e-68
Identity = 94/121 (77.69%), Postives = 109/121 (90.08%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S +LSSYRDQHFKG+R EQ+RLL  +CTLYVGN+SFYTTEEQ+YELF KCGD++RI+MGLDK+K+TPCGFCF+E+Y RAD+E  M YIN TRLD+RIIRTDWD GFIEGRQYGRGKTGGQ
Sbjct:   11 PSVELSSYRDQHFKGTRAEQDRLLRNSCTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDKYKKTPCGFCFIEYYNRADAESCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQ 131
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. nr
Match: gi|321455647|gb|EFX66775.1| (hypothetical protein DAPPUDRAFT_231808 [Daphnia pulex])

HSP 1 Score: 210.69 bits (535), Expect = 6.097e-68
Identity = 96/116 (82.76%), Postives = 108/116 (93.10%), Query Frame = 0 
Query:    7 SSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
            S+YRDQHFKGSR EQERLLSQ+CTLYVGN+SF+TTEEQ++ELFGKCGDVKRI+MGLDKF RTPCGFCFVEFY R DSE A+ ++N TRLD+RI+RTDWD GFIEGRQYGRGKTGGQ
Sbjct:    5 STYRDQHFKGSRVEQERLLSQSCTLYVGNLSFFTTEEQIHELFGKCGDVKRIIMGLDKFTRTPCGFCFVEFYLRNDSENAIRFVNGTRLDDRIVRTDWDAGFIEGRQYGRGKTGGQ 120
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. nr
Match: gi|1339078705|ref|XP_023726781.1| (nuclear cap-binding protein subunit 2 isoform X1 [Cryptotermes secundus])

HSP 1 Score: 211.46 bits (537), Expect = 8.523e-68
Identity = 96/121 (79.34%), Postives = 108/121 (89.26%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S +LSSYRDQHFKGSR EQERLL  + TLY+GN+SFYTTEEQ+YELF KCGDVKRI+MGLDKFK+TPCGFCFVE+Y R D+E +M YIN TRLD+RIIRTDWD GF+EGRQYGRGKTGGQ
Sbjct:   32 PSVELSSYRDQHFKGSRGEQERLLRTSSTLYIGNLSFYTTEEQIYELFSKCGDVKRIIMGLDKFKKTPCGFCFVEYYSRPDAENSMRYINGTRLDDRIIRTDWDAGFVEGRQYGRGKTGGQ 152
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. nr
Match: gi|1070140944|ref|XP_018372891.1| (PREDICTED: nuclear cap-binding protein subunit 2 [Trachymyrmex cornetzi] >gi|1009409736|gb|KYN28922.1| Nuclear cap-binding protein subunit 2 [Trachymyrmex cornetzi])

HSP 1 Score: 210.305 bits (534), Expect = 9.870e-68
Identity = 94/121 (77.69%), Postives = 108/121 (89.26%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
             S +LSSYRDQHFKG+R EQ+RLL  +CTLYVGN+SFYTTEEQ+YELF KCGD++RI+MGLDK+K+TPCGFCF+E+Y RAD E  M YIN TRLD+RIIRTDWD GFIEGRQYGRGKTGGQ
Sbjct:   11 PSVELSSYRDQHFKGTRAEQDRLLRNSCTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDKYKKTPCGFCFIEYYNRADGESCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQ 131
[Close]
BLAST of nuclear cap-binding protein subunit 2 vs. nr
Match: gi|766923731|ref|XP_011506502.1| (PREDICTED: nuclear cap-binding protein subunit 2 [Ceratosolen solmsi marchali])

HSP 1 Score: 210.305 bits (534), Expect = 1.055e-67
Identity = 94/121 (77.69%), Postives = 110/121 (90.91%), Query Frame = 0 
Query:    2 SSTDLSSYRDQHFKGSRHEQERLLSQTCTLYVGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEFYGRADSEMAMAYINSTRLDERIIRTDWDVGFIEGRQYGRGKTGGQ 122
            +S +LSSYRDQHFKGSR EQ+RLL  +CTLYVGN+SFYTTEEQ+YELF +CGD+KRI+MGLDK+K+TPCGFCF+E+Y RAD+E  M Y+N TRLD+RIIRTDWD GFIEGRQYGRGKTGGQ
Sbjct:    6 ASIELSSYRDQHFKGSRAEQDRLLRTSCTLYVGNLSFYTTEEQIYELFSRCGDIKRIIMGLDKYKKTPCGFCFLEYYQRADAENCMRYVNGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQ 126
The following BLAST results are available for this feature:
BLAST of nuclear cap-binding protein subunit 2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAG000000006007.040e-6577.19supercontig:LSalAtl2s:LSalAtl2s109:434479:437086:1... [more]
EMLSAG000000113108.902e-931.94supercontig:LSalAtl2s:LSalAtl2s77:328780:331049:1 ... [more]
EMLSAG000000082287.223e-729.87supercontig:LSalAtl2s:LSalAtl2s496:349997:351002:-... [more]
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BLAST of nuclear cap-binding protein subunit 2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|259511394|sp|B0W939.1|NCBP2_CULQU6.495e-7076.86RecName: Full=Nuclear cap-binding protein subunit ... [more]
gi|259511484|sp|Q7QCB6.3|NCBP2_ANOGA3.398e-6976.86RecName: Full=Nuclear cap-binding protein subunit ... [more]
gi|122106168|sp|Q177H0.1|NCBP2_AEDAE6.144e-6976.03RecName: Full=Nuclear cap-binding protein subunit ... [more]
gi|259511692|sp|B7P877.1|NCBP2_IXOSC6.216e-6875.83RecName: Full=Nuclear cap-binding protein subunit ... [more]
gi|259511689|sp|B4NB54.1|NCBP2_DROWI2.315e-6774.38RecName: Full=Nuclear cap-binding protein subunit ... [more]
gi|122119432|sp|Q1HE01.1|NCBP2_BOMMO2.820e-6773.55RecName: Full=Nuclear cap-binding protein subunit ... [more]
gi|259511301|sp|B3P0D7.1|NCBP2_DROER2.883e-6775.21RecName: Full=Nuclear cap-binding protein subunit ... [more]
gi|259511300|sp|B3LYP1.1|NCBP2_DROAN5.444e-6775.21RecName: Full=Nuclear cap-binding protein subunit ... [more]
gi|259511490|sp|B4JUT1.1|NCBP2_DROGR6.074e-6775.21RecName: Full=Nuclear cap-binding protein subunit ... [more]
gi|259511690|sp|B4PL68.1|NCBP2_DROYA7.646e-6774.38RecName: Full=Nuclear cap-binding protein subunit ... [more]

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BLAST of nuclear cap-binding protein subunit 2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1233162706|ref|XP_022207484.1|4.438e-6980.99nuclear cap-binding protein subunit 2 isoform X2 [... [more]
gi|1227985117|ref|XP_021924221.1|9.455e-6980.17nuclear cap-binding protein subunit 2 isoform X1 [... [more]
gi|1069679656|ref|XP_018301578.1|3.088e-6879.34PREDICTED: nuclear cap-binding protein subunit 2 [... [more]
gi|746834153|ref|XP_011067287.1|3.974e-6877.69PREDICTED: nuclear cap-binding protein subunit 2 [... [more]
gi|1068428787|ref|XP_018058213.1|4.152e-6877.69PREDICTED: nuclear cap-binding protein subunit 2 [... [more]
gi|801398195|ref|XP_012059540.1|4.386e-6877.69PREDICTED: nuclear cap-binding protein subunit 2 [... [more]
gi|321455647|gb|EFX66775.1|6.097e-6882.76hypothetical protein DAPPUDRAFT_231808 [Daphnia pu... [more]
gi|1339078705|ref|XP_023726781.1|8.523e-6879.34nuclear cap-binding protein subunit 2 isoform X1 [... [more]
gi|1070140944|ref|XP_018372891.1|9.870e-6877.69PREDICTED: nuclear cap-binding protein subunit 2 [... [more]
gi|766923731|ref|XP_011506502.1|1.055e-6777.69PREDICTED: nuclear cap-binding protein subunit 2 [... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1340_size46339supercontigscaffold1340_size46339:1430..2009 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1340_size46339-snap-gene-0.8-mRNA-1maker-scaffold1340_size46339-snap-gene-0.8-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1340_size46339:1430..2009+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1340_size46339-snap-gene-0.8 ID=maker-scaffold1340_size46339-snap-gene-0.8|Name=nuclear cap-binding protein subunit 2|organism=Tigriopus kingsejongensis|type=gene|length=580bp|location=Sequence derived from alignment at scaffold1340_size46339:1430..2009+ (Tigriopus kingsejongensis)
CCCTGCCGCGTCGGCATCCGAGTTGATGTTGTCCAACCAAACACAAGGAA
GTGAACCACCCGATCGGAGCTGGTGGAACTAAAGTGGAACTGTCTGACGA
TCGATCCCACCTGAGCCGAGGATCGCACGGATTGCTCCAATCAGCATGTC
CTCGACGGATTTGAGTTCCTACCGGGACCAGCATTTCAAGGTGAGAGCCA
GCCCCGAATAACCATTCCCCACACTGGTCCCTTCTGACGGCGGTCTCTCT
TTTGGACAGGGTTCTCGCCATGAACAGGAGCGACTCCTGTCCCAGACCTG
CACCCTCTACGTGGGCAACATGTCCTTCTACACGACCGAGGAGCAACTGT
ACGAGCTGTTTGGCAAGTGCGGCGACGTCAAGCGCATCGTCATGGGCCTG
GACAAGTTCAAGCGGACGCCGTGCGGCTTCTGCTTCGTCGAATTCTACGG
GCGGGCCGACTCCGAGATGGCCATGGCCTACATCAACAGCACCCGACTGG
ACGAGCGCATCATCCGAACCGACTGGGATGTGGGCTTCATTGAGGGACGA
CAGTACGGGCGCGGCAAGACTGGCGGACAG
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Synonyms
The feature 'nuclear cap-binding protein subunit 2' has the following synonyms
Synonym
Tk01992
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