dna helicase, maker-scaffold1360_size45726-snap-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of dna helicase vs. L. salmonis genes
Match: EMLSAG00000001280 (supercontig:LSalAtl2s:LSalAtl2s1211:177823:184435:1 gene:EMLSAG00000001280 transcript:EMLSAT00000001280 description:"augustus_masked-LSalAtl2s1211-processed-gene-1.3") HSP 1 Score: 154.066 bits (388), Expect = 3.507e-40 Identity = 98/273 (35.90%), Postives = 154/273 (56.41%), Query Frame = 0 Query: 116 NDMGLGKTLQVLALL-------LRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQ--LDYTVHHGNT--RTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKF-----ATRIDGLGDKD------TSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIK------DSI---GESDPIRALHYVSGVTN 357 +DMGLGKTLQ + +L + Q + SLVI P +L ++W EI KFT L +++GNT R+ + +K +++I++YD V +DIE + K++Y ILDE IKN ++ A++ L S+++L ++GTPI+NS ++++ F F+ PG LGS + F KF A+R +D +E L + + PF+LRR K +V KDLP K+ YC++ P Q +LYE ++ K +SI +S +AL Y+ V N Sbjct: 1155 DDMGLGKTLQSICILAGDHYNRINQNMENIP-SLVICPPTLRWHWKEEILKFTKGKFLSPLLYNGNTVNRSSTRTFIEKNNILITSYDIVRKDIEFLKEIKWNYIILDEGHIIKNAKAKTTIAIKSLSSNHRLILSGTPIQNSVLEIWSLFDFLMPGYLGSEREFSSKFSKPIIASRESKCSKRDKEAGALATESLHRQILPFVLRRMKEDVLKDLPPKITQDYYCDLSPLQIRLYEEYTLKQKLDDLDXNSIKPTSKSHIFQALQYLRKVCN 1426
BLAST of dna helicase vs. L. salmonis genes
Match: EMLSAG00000011923 (supercontig:LSalAtl2s:LSalAtl2s841:50785:68899:1 gene:EMLSAG00000011923 transcript:EMLSAT00000011923 description:"maker-LSalAtl2s841-augustus-gene-0.30") HSP 1 Score: 150.599 bits (379), Expect = 5.293e-39 Identity = 78/229 (34.06%), Postives = 130/229 (56.77%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKK--GVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDL-----SEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTS------EMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYE 330 ++MGLGKT+Q +A L K+ G L++VP S+L NW EI+K+ P ++G+ + + L ++ + I++Y V +D F + K+HY ILDE+Q IKN SQR++ + SD +L +TGTP++N+ +L++ F+ P + S + FK+ F+ + G+ + + L K++ PFLLRR K V K LP+K E ++ C + Q+ LY+ Sbjct: 471 ADEMGLGKTIQTIAFLAHMACEKQLWGPHLIVVPTSVLLNWEMEIKKWAPSFKVLTYYGSQKERRLKRIGWTKPNAFHICITSYKLVIQDHSSFRRKKWHYFILDEAQHIKNFKSQRWQMLLNFASDGRLLLTGTPLQNNLMELWSLMHFLMPHVFESHRDFKEWFSNPLTGMVEGSAEYNDGLIKRLHKVLRPFLLRRLKNEVEKQLPKKYEHIIRCGLSNRQRYLYD 699
BLAST of dna helicase vs. L. salmonis genes
Match: EMLSAG00000007531 (supercontig:LSalAtl2s:LSalAtl2s433:290565:294557:-1 gene:EMLSAG00000007531 transcript:EMLSAT00000007531 description:"maker-LSalAtl2s433-snap-gene-2.16") HSP 1 Score: 144.821 bits (364), Expect = 3.995e-37 Identity = 85/241 (35.27%), Postives = 132/241 (54.77%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALL--LRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDL-----------SEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLG------DKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEI 336 ++MGLGKT+Q L+LL + ++ + G LVI P S L NW E+ KF P + G+ + + + ++ +VI++Y V D + F + K+ Y +LDE+QAIK+ SSQR+K + K +L ++GTPI+NS +L++ FV P L S + F D F+ I+ D+ L I+ PF+LRR K +V +L +KLE +LYC + QK LY L+ +I Sbjct: 371 ADEMGLGKTVQALSLLAYIAERYNIWGPFLVIXPASTLHNWQQEVTKFLPSFKVVPYWGSPQERKVLRHFWDQKNLHTQSASFHIVITSYQLVISDFKYFNRIKWQYLVLDEAQAIKSSSSQRWKMLLEFKCRNRLLLSGTPIQNSMAELWSLLHFVMPTLFDSHQEFNDWFSKDIESTAENKSQIDEKQISRLHLILKPFMLRRIKKDVENELTDKLEVLLYCPLTIRQKLLYMGLKKKI 611
BLAST of dna helicase vs. L. salmonis genes
Match: EMLSAG00000001291 (supercontig:LSalAtl2s:LSalAtl2s1214:48338:54824:1 gene:EMLSAG00000001291 transcript:EMLSAT00000001291 description:"augustus_masked-LSalAtl2s1214-processed-gene-0.5") HSP 1 Score: 129.028 bits (323), Expect = 5.976e-32 Identity = 80/237 (33.76%), Postives = 132/237 (55.70%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALL--LRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGN--TRTKDLSEYK--KMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDY----KLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDK------DTSEMLR---KIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEAL 332 ++MGLGKT+Q +AL+ L +K G L+IVP S L NW E K+ P + + G+ +R K S+ + K +V+++TY+ V RD V AK ++ Y I+DE +KN K ++L + Y +L +TGTP++N +L+A +F+ P + + +F+ F G+K +T ++R K++ PFLLRR K +V LP+K+E ++ CEM Q+ +Y + Sbjct: 5 ADEMGLGKTIQTIALITYLMEKKKNMGPYLIIVPLSTLSNWILEFGKWAPSVQIVPYKGSPGSRRKAQSQMRATKFNVLVTTYEYVIRDKSVLAKIRWKYMIIDEGHRMKN---HHCKLTQILNTYYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAVTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSALQRVIYSQM 238
BLAST of dna helicase vs. L. salmonis genes
Match: EMLSAG00000009416 (supercontig:LSalAtl2s:LSalAtl2s600:248324:253025:1 gene:EMLSAG00000009416 transcript:EMLSAT00000009416 description:"maker-LSalAtl2s600-snap-gene-2.21") HSP 1 Score: 121.709 bits (304), Expect = 1.966e-29 Identity = 73/228 (32.02%), Postives = 123/228 (53.95%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALL--LRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNT--RTKDLSEYK--KMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDY----KLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEAL 332 ++MGLGKT+Q +AL+ L ++ G L+IVP S L NW E EK+ P + G+ R S+ K K +V+++TY+ V +D V AK ++ Y I+DE +KN K ++L + Y ++ +TGTP++N +L+A +F+ P + + +F+ F + ++ PFLLRR K +V LP+K+E ++ CEM Q+ +Y+ + Sbjct: 429 ADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWTLEFEKWAPSAQVVAYKGSPGLRRNIQSQMKATKFNVLVTTYEYVIKDKSVLAKIRWKYMIIDEGHRMKN---HHCKLTQILNTYYTSNNRILLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWF-----------NAPFATTVLRPFLLRRLKKDVESQLPDKVEYIIKCEMSALQRVVYQQM 642
BLAST of dna helicase vs. L. salmonis genes
Match: EMLSAG00000008498 (supercontig:LSalAtl2s:LSalAtl2s524:101535:104062:-1 gene:EMLSAG00000008498 transcript:EMLSAT00000008498 description:"maker-LSalAtl2s524-augustus-gene-1.41") HSP 1 Score: 118.242 bits (295), Expect = 1.915e-28 Identity = 68/241 (28.22%), Postives = 122/241 (50.62%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQ-KLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGN--------TRTKDLSEYKKM-----DVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEM----------LRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEA 331 ++MGLGKT+Q ++L ++ +G LV+ P S L NW E ++FTP + + HGN R KD++ + V +++Y+ + ++F + Y ++DE +KN + K +++ + KL +TGTP++N+ +L++ +F+ P + F+ F+ + D+ M L +I+ PFLLRR K ++ +P K E ++YC M Q LY+A Sbjct: 214 ADEMGLGKTIQTISLFAHLIEMGVEGPFLVVAPLSTLGNWVNEFKRFTPDIPVVLFHGNLEKRKELFRRLKDVAHVTGIRGGIKSVFVTSYEIILNSRKLFKNMNWKYIVVDEGHRLKNFKCRLIKELKMYHTANKLLLTGTPLQNNMAELWSLLNFLMPEIFNDLNMFQSWFSVEKIQANENDSISMSERETKVLTTLHQILSPFLLRRIKSDIELKIPPKKEVLVYCPMTAYQTNLYKA 454
BLAST of dna helicase vs. L. salmonis genes
Match: EMLSAG00000000421 (supercontig:LSalAtl2s:LSalAtl2s1067:62002:65123:-1 gene:EMLSAG00000000421 transcript:EMLSAT00000000421 description:"maker-LSalAtl2s1067-augustus-gene-0.15") HSP 1 Score: 113.235 bits (282), Expect = 8.686e-27 Identity = 72/235 (30.64%), Postives = 119/235 (50.64%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKKGVS---LVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKD------LSEYKKMDVVISTYDTV---SRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSE--------MLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLY 329 ++MGLGKT+ ++ L L + G S L++VP S + NW EIE + P L ++G+ + + E + D++++TY V + D +F K FHY + DE+ +KN+S+ RY+ + +K+ KL +TGTP++N+ +L + FV P L + K K + +K + + I+ PF LRR K +V K+LP K E V + Q + Y Sbjct: 301 ADEMGLGKTVXAISFLAH--LKETGNSKPHLIVVPSSTMDNWEKEIETWCPSLSIVKYYGSQEERQKIRYDLVRENLEYDILLTTYSMVVSSAEDKSLFKKISFHYVVFDEAHMLKNMSTSRYENLMRVKAPRKLLLTGTPLQNNLVELMSLLVFVMPELFANKKDLLKKVFSLFPKASEKQSRSNYEQERIAHAKHIMKPFFLRRLKVDVIKNLPPKNERVEKLPLTSRQHEHY 533
BLAST of dna helicase vs. L. salmonis genes
Match: EMLSAG00000004539 (supercontig:LSalAtl2s:LSalAtl2s237:482549:485751:-1 gene:EMLSAG00000004539 transcript:EMLSAT00000004539 description:"augustus_masked-LSalAtl2s237-processed-gene-4.3") HSP 1 Score: 109.768 bits (273), Expect = 1.391e-25 Identity = 67/220 (30.45%), Postives = 119/220 (54.09%), Query Frame = 0 Query: 136 SKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSEYKKM-----DVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEAL---RIEIKDSIGESDPIR 347 S G +V+VP++ L NW E +K+ P L G+ T++ M DV++++++ + R+ VF K + Y ++DE+ IKN S+ +R +K+ +L +TGTP++N+ +L+A +F+ P + S+ F DK+ LGD + L I+ PF+LRR K +V K L K E+ +Y + Q++ Y + I+I + G+ + +R Sbjct: 109 SDPGPHMVLVPKTTLANWMNEFKKWCPTLRAVCLIGDQETRNKFIRDTMMPGGWDVLVTSFEMLLREKSVFKKFTWRYMVIDEAHRIKNEESKLSLIVREIKTTNRLLLTGTPLQNNLHELWALLNFLLPEVFSSSNDF-DKWFNTDTCLGDDSLVKRLHGILKPFVLRRLKSDVEKSLLPKKETNIYMSLSKMQREWYTKILMKDIDIVNGAGKVEKMR 327
BLAST of dna helicase vs. L. salmonis genes
Match: EMLSAG00000011974 (supercontig:LSalAtl2s:LSalAtl2s851:141371:144613:-1 gene:EMLSAG00000011974 transcript:EMLSAT00000011974 description:"maker-LSalAtl2s851-augustus-gene-0.6") HSP 1 Score: 108.612 bits (270), Expect = 3.802e-25 Identity = 75/294 (25.51%), Postives = 139/294 (47.28%), Query Frame = 0 Query: 59 NGTYFAVKGGLGINNQNWERQFNTDLLFTGCIDFMAETYEAGSASRLYAQLGFHQRGNDMGLGKTLQVLALLLRQKLS-KKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHH------GNTRTKDLSE-YKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSE-----------MLRKIVHPFLLRRTKGNVAK--DLPEKLESVLYCEMEPAQKKLYEA 331 + Y + GL + + W + + + C+ ++ E ++ L G++MGLGKT+Q+LA L S G +L+I P +L+ W E + P V H G +R +S ++ +++++Y V E K++Y L E I+ + A++ + + ++L ++G+P++N+ +L++ F F+ PG LG+ F +F+ I G + S +LR + P+LLRR K +V +LPEK E +L+C + Q+ Y + Sbjct: 242 DSKYEKLNNGLKVPYRIWSKLYKYQKV---CVQWLWELHQQDVGGIL---------GDEMGLGKTIQILAYLASLSYSIGLGPTLIICPATLMHQWVKESHAWWPAFRIAVLHDSGSYQGKSRKALISSIFEAKGILVTSYSGVVSFKEPINSLKWNYVXLXEGHKIRKPDALXTXAVKSIPTCHRLILSGSPLQNNLKELWSLFDFIYPGKLGTLPVFIQQFSVPITQGGYSNASRVAVATAYKCATVLRDTITPYLLRRMKSDVKSHINLPEKSEQILFCRLTDEQRSCYRS 523
BLAST of dna helicase vs. L. salmonis genes
Match: EMLSAG00000010320 (supercontig:LSalAtl2s:LSalAtl2s683:133039:146718:1 gene:EMLSAG00000010320 transcript:EMLSAT00000010320 description:"maker-LSalAtl2s683-augustus-gene-1.38") HSP 1 Score: 105.531 bits (262), Expect = 4.004e-24 Identity = 67/230 (29.13%), Postives = 118/230 (51.30%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALL--LRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDL-SEYK---------KMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEAL 332 ++MGLGKT+Q + L L G LV+VP S L W E ++ P ++ + G+ ++ + EY+ K + +++TY+ V +D + + ++DE+ +KN S YK ++ L +L +TGTP++NS +L++ F+ P F ++F T +K L K++ P++LRR K +V K LP K+E +L +M QK+ Y+ + Sbjct: 500 ADEMGLGKTIQTVNFLYYLFHTHQLYGPFLVVVPLSTLDAWQREFARWAPDINVLSYVGDVASRSIIREYEWTHPGNKRSKFNAILTTYEIVLKDKQFLINVPYAVIMVDEAHRLKNDDSMLYKCLQDLTVYQRLLITGTPLQNSLKELWSLLHFIMPDKFDRWDEFNEQFGT---SSAEKRGYTKLHKLLEPYILRRVKKDVEKSLPAKVERILRVDMSRKQKQFYKWI 726
BLAST of dna helicase vs. SwissProt
Match: gi|94730430|sp|P47264.3|Y018_MYCGE (RecName: Full=Uncharacterized ATP-dependent helicase MG018) HSP 1 Score: 171.4 bits (433), Expect = 1.349e-44 Identity = 93/248 (37.50%), Postives = 147/248 (59.27%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKKGV--SLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTK-DLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDSIGESDPIRALHYVSGVTNTR 359 ++MGLGKT QV+ +L S K + SL+IVP SLL NW +E +KF P + +GN + + + E K +++ +++ + DI+ ++ KFHY ++DE+Q IKN +S KA + +K ++ LA+TGTPIEN DL++ F FV P LG+ K F D+F + ++ + L K PF+LRRTK V K+LP+K+ + +Y E+ +KLY+ + + I ESD AL+ +S + R Sbjct: 602 ADEMGLGKTAQVIFAMLDSYQSTKSLLPSLIIVPASLLLNWKSEFQKFAPHVKIVTANGNFKERSQVYESLKNQILLMSFNVLRSDIKWISQKKFHYVVIDEAQGIKNENSTVTKAAKKIKGNFCLALTGTPIENRLLDLWSCFDFVLPNFLGNKKQFSDQFEKE----KNDESFQKLMKKTSPFILRRTKNKVLKELPKKIITDIYVELSEEHQKLYDKQKTDGLKEIKESDAKNALNILSLILKLR 845
BLAST of dna helicase vs. SwissProt
Match: gi|2493354|sp|P75093.1|Y020_MYCPN (RecName: Full=Uncharacterized ATP-dependent helicase MPN_020) HSP 1 Score: 169.088 bits (427), Expect = 8.563e-44 Identity = 94/225 (41.78%), Postives = 138/225 (61.33%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKKGV---SLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSE-YKKM--DVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALR 333 ++MGLGKT+QV+ LL L K V SL+IVP SLL NW +E EKF PQ+ V N +K+ E Y+K+ +++I +++ + D+++ K +FHY ++DE+Q IKN SS KA + +K ++ LA+TGTPIEN DL++ F FV P LG+ K F D+F + +L + PF+LRRTK V K+LP K+ + +Y E+ P +KLYE R Sbjct: 602 ADEMGLGKTVQVIFALLDSYL-KNHVNLPSLIIVPASLLLNWKSEFEKFAPQIKVKV--ANIPSKERGELYEKLTNEILIVSFNVLRSDVKLITKQRFHYVVIDEAQGIKNDSSSITKAAKKVKGNFCLALTGTPIENRLLDLWSCFDFVLPSFLGNKKQFTDQFEKE----KTDQSFHLLMQRTSPFILRRTKSKVLKELPNKITTDIYVELNPMHQKLYEEER 819
BLAST of dna helicase vs. SwissProt
Match: gi|122064843|sp|Q9NEL2.4|SSL1_CAEEL (RecName: Full=Helicase ssl-1; AltName: Full=Swi/snf2-like protein 1) HSP 1 Score: 154.451 bits (389), Expect = 1.113e-38 Identity = 81/231 (35.06%), Postives = 132/231 (57.14%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKK--GVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSEYKK-------MDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTS------EMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYE 330 ++MGLGKT+Q ++LL S+ G L++VP S++ NW E +K+ P L + G K+ +E +K V I++Y TV++DI F + + Y ILDE+Q IKN SQR++A+ +++ +L +TGTP++NS +L++ F+ P + S FKD F+ + G+ + + L K++ PF+LRR K V K LPEK E ++ C + Q+ LY+ Sbjct: 582 ADEMGLGKTIQTISLLAHMACSESIWGPHLIVVPTSVILNWEMEFKKWCPALKILTYFGTA--KERAEKRKGWMKPNCFHVCITSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYD 810
BLAST of dna helicase vs. SwissProt
Match: gi|1160421823|sp|Q59KI4.2|INO80_CANAL (RecName: Full=Putative DNA helicase INO80) HSP 1 Score: 152.525 bits (384), Expect = 4.061e-38 Identity = 98/275 (35.64%), Postives = 151/275 (54.91%), Query Frame = 0 Query: 90 IDFMAETYEAGSASRLYAQLGFHQRGNDMGLGKTLQVLALL--LRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSE---------YKK---MDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTS---EMLRK---IVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDSIGESD 344 ++++A YE G L ++MGLGKT+Q +++L L + + G LV+ P S L NW EI KF P+ + GN + + + Y K V++++Y + DI F K K+ Y ILDE+QAIK+ SS R+K++ L +L +TGTPI+NS +L+A F+ P + S F D FA I+ +TS + LR+ I+ PF+LRR K NV +L +K+E +YC++ QKKLY+ LR +I S+ ++D Sbjct: 680 LNWLANLYEQGINGIL---------ADEMGLGKTVQSISVLAYLAETYNMWGPFLVVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDSPFHVLVTSYQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPIQNSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQLRRLHMILKPFMLRRIKKNVQSELGDKVEIDVYCDLTTRQKKLYQQLRSQI--SMSDTD 943
BLAST of dna helicase vs. SwissProt
Match: gi|81345827|sp|P94593.2|YWQA_BACSU (RecName: Full=Uncharacterized ATP-dependent helicase YwqA) HSP 1 Score: 150.984 bits (380), Expect = 9.471e-38 Identity = 87/232 (37.50%), Postives = 135/232 (58.19%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLS--KKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKD---LSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGN--VAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDS 339 +DMGLGKT+Q++A L K S +K L+I P S+L NW E++ F P L +H+G R K + Y+ DVV+++Y D E + ++ LDE+Q IKN +++ +A+R LK + +A++GTP+EN +L++ F F+N G LGS F ++ I+ D+ L++++ PFLLRRTK + VA +LPEKLE + + Q LYE L +KD+ Sbjct: 474 ADDMGLGKTIQMIAYFLHVKESGRQKTPHLIIAPTSVLGNWQRELQTFAPDLSVALHYGPRRPKGDDFAAHYENADVVLTSYGLSHADTEELSSVTWNTICLDEAQNIKNAHTKQSRAIRKLKGLHHIALSGTPMENRLTELWSIFDFMNKGYLGSLTGFHKRYVLPIEKDRDEKRIGQLQQLIRPFLLRRTKRDEEVALNLPEKLEEKEFIPLSAEQASLYEQL---VKDT 702
BLAST of dna helicase vs. SwissProt
Match: gi|527525141|sp|B5BT18.1|BTAF1_ARATH (RecName: Full=TATA-binding protein-associated factor BTAF1; Short=AtBTAF1; AltName: Full=Protein BTAF1 homolog; AltName: Full=Protein ROOT GROWTH DEFECTIVE 3) HSP 1 Score: 151.369 bits (381), Expect = 9.990e-38 Identity = 90/253 (35.57%), Postives = 136/253 (53.75%), Query Frame = 0 Query: 109 LGFHQR-------GNDMGLGKTLQVLALLLRQKLSKKGV--------SLVIVPRSLLFNWAAEIEKFT-----PQLDYTVHHGNTRTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKF-----ATRIDGLGDKDTS------EMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYE 330 LGF +R +DMGLGKTLQ A++ ++G S+++ P +L+ +WA EIEK+ L Y V R ++ +V+I++YD V +D++ + ++Y ILDE IKN S+ A++ LK+ ++L ++GTPI+N+ +L++ F F+ PG LG+ + F+ + A R KD E L K V PFLLRRTK V DLPEK+ YC++ P Q KLYE Sbjct: 1462 LGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQY-VGSAQDRVSLREQFNNHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYE 1713
BLAST of dna helicase vs. SwissProt
Match: gi|206557976|sp|O14148.4|INO80_SCHPO (RecName: Full=Putative DNA helicase ino80) HSP 1 Score: 150.214 bits (378), Expect = 2.192e-37 Identity = 95/273 (34.80%), Postives = 146/273 (53.48%), Query Frame = 0 Query: 90 IDFMAETYEAGSASRLYAQLGFHQRGNDMGLGKTLQVLALL--LRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDL------------SEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTS------EMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDSIGE 342 ++++A YE G L ++MGLGKT+Q ++++ L + + G LVI P S L NW EI +F P+L + G+T+ + + E VV+++Y V D + F K+ Y ILDE+QAIK+ SS R+K++ K +L +TGTPI+N+ +L+A F+ P L S F + F+ I+ +T + L I+ PF+LRR K NV +L EK+E +YC++ QK LY+ALR +I SI E Sbjct: 850 LNWLANLYEQGINGIL---------ADEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMILKPFMLRRVKKNVQSELGEKIEKEVYCDLTQRQKILYQALRRQI--SIAE 1111
BLAST of dna helicase vs. SwissProt
Match: gi|81170682|sp|O43065.4|MOT1_SCHPO (RecName: Full=Probable helicase mot1; AltName: Full=Modifier of transcription 1; AltName: Full=TBP-associated factor mot1) HSP 1 Score: 149.058 bits (375), Expect = 6.431e-37 Identity = 84/239 (35.15%), Postives = 134/239 (56.07%), Query Frame = 0 Query: 116 NDMGLGKTLQVLALLL-----RQKLSKKG--------VSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNT--RTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTS-----------EMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKL 328 +DMGLGKTLQ + ++ RQKL ++ SL++ P +L +W E+ + P L + + G R K S+ KK DVV+++YD D++ K ++Y +LDE IKN ++ KA++ L+S ++L ++GTPI+N+ +L++ F F+ PG LG+ K+F+++F I D +S E + K V PF+LRR K +V DLP K+ YC+M Q+KL Sbjct: 1383 DDMGLGKTLQTICIVASDHYNRQKLFEESGSPKFAHVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAKIRSKMKKSDVVVTSYDICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADLPPKIIQDYYCDMSDLQRKL 1621
BLAST of dna helicase vs. SwissProt
Match: gi|160380691|sp|Q9NDJ2.2|DOM_DROME (RecName: Full=Helicase domino) HSP 1 Score: 147.902 bits (372), Expect = 1.566e-36 Identity = 78/229 (34.06%), Postives = 132/229 (57.64%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKK--GVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDL-----SEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGL--GDKDTSEM----LRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYE 330 ++MGLGKT+Q +ALL +K G L++VP S++ NW E +K+ P ++G+ + + L ++ V I++Y V +D + F + K+ Y ILDE+Q IKN SQR++ + ++ +L +TGTP++N +L++ F+ P + S + FK+ F+ + G+ G+ + +E L K++ PFLLRR K V K +P+K E V+ C + Q+ LYE Sbjct: 938 ADEMGLGKTIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYE 1166
BLAST of dna helicase vs. SwissProt
Match: gi|296452947|sp|Q6ZRS2.3|SRCAP_HUMAN (RecName: Full=Helicase SRCAP; AltName: Full=Domino homolog 2; AltName: Full=Snf2-related CBP activator) HSP 1 Score: 147.902 bits (372), Expect = 1.658e-36 Identity = 77/229 (33.62%), Postives = 132/229 (57.64%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKK--GVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDL-----SEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGL--GDKDTSE----MLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYE 330 ++MGLGKT+Q ++LL K G L+IVP S++ NW E++++ P ++G + + L ++ V I++Y V +D + F + + Y ILDE+Q IKN SQR++++ S +L +TGTP++NS +L++ F+ P + S + FK+ F+ + G+ G ++ +E L K++ PFLLRR K +V K +P+K E V+ C + Q+ LY+ Sbjct: 642 ADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYD 870
BLAST of dna helicase vs. nr
Match: gi|1214104607|ref|WP_088748779.1| (helicase SNF2 [Sphingobacteriales bacterium TSM_CSS]) HSP 1 Score: 256.529 bits (654), Expect = 3.005e-71 Identity = 132/253 (52.17%), Postives = 177/253 (69.96%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKK-GVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTK-DLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEAL----RIEIKDSIGESDPIRA-LHYVSGVTNTRE 360 +DMGLGKTLQ+L L K K+ G SLV+VP SL+FNW AEIEKF L +HG R K + +KK D++I++Y T++ DIE F K FHY ILDESQ++KN ++RYKA+RLL S +LA+TGTPIEN+TFDLYAQ +F+NPG+LGS + FK+++A ID D++ L++IV+PF+LRRTK VAKDLPEK E++LYCEM Q+K+YEA R +I D I ES +A + + G+ R+ Sbjct: 853 ADDMGLGKTLQILTFLQHLKQQKQSGTSLVVVPTSLIFNWEAEIEKFCHSLTLLRYHGPDRHKTSIDSFKKYDIIITSYGTLASDIEKFIKFTFHYVILDESQSVKNPETKRYKAVRLLNSHNRLALTGTPIENNTFDLYAQLNFLNPGMLGSIEFFKEQYANPIDKHNDQERVAELKRIVYPFILRRTKELVAKDLPEKTETILYCEMGAEQRKVYEAFRDMYRFKILDRINESGMSKAGMFILEGLMKLRQ 1105
BLAST of dna helicase vs. nr
Match: gi|1213679131|gb|OWY19670.1| (hypothetical protein B6N25_13580 [Sphingobacteriales bacterium TSM_CSS] >gi|1367606778|gb|PSJ76815.1| helicase SNF2 [Sphingobacteriales bacterium UPWRP_1]) HSP 1 Score: 256.529 bits (654), Expect = 3.384e-71 Identity = 132/253 (52.17%), Postives = 177/253 (69.96%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKK-GVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTK-DLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEAL----RIEIKDSIGESDPIRA-LHYVSGVTNTRE 360 +DMGLGKTLQ+L L K K+ G SLV+VP SL+FNW AEIEKF L +HG R K + +KK D++I++Y T++ DIE F K FHY ILDESQ++KN ++RYKA+RLL S +LA+TGTPIEN+TFDLYAQ +F+NPG+LGS + FK+++A ID D++ L++IV+PF+LRRTK VAKDLPEK E++LYCEM Q+K+YEA R +I D I ES +A + + G+ R+ Sbjct: 838 ADDMGLGKTLQILTFLQHLKQQKQSGTSLVVVPTSLIFNWEAEIEKFCHSLTLLRYHGPDRHKTSIDSFKKYDIIITSYGTLASDIEKFIKFTFHYVILDESQSVKNPETKRYKAVRLLNSHNRLALTGTPIENNTFDLYAQLNFLNPGMLGSIEFFKEQYANPIDKHNDQERVAELKRIVYPFILRRTKELVAKDLPEKTETILYCEMGAEQRKVYEAFRDMYRFKILDRINESGMSKAGMFILEGLMKLRQ 1090
BLAST of dna helicase vs. nr
Match: gi|1231952134|gb|OYT16897.1| (hypothetical protein B7C24_05345 [Bacteroidetes bacterium 4572_77]) HSP 1 Score: 252.677 bits (644), Expect = 5.106e-70 Identity = 127/257 (49.42%), Postives = 170/257 (66.15%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDSIGESDPIRALHYVSGVTNTREGQSGLVVRGGL 371 +DMGLGKTLQ+L+ ++ K SLVI+P +LLFNW EIEKFT L H+G+ R K++S + D++IS+Y + +DIE +KFH+ +LDESQAIKN +SQRYKA LL+ K A+TGTPIENSTFDLYAQ +FVNPG G KSFKD ++ +ID G+++ S+ L+KI HPF+LRRTK V +LP K E V+YCEM Q+ +YEA R + +D I +S + G+S L+V GL Sbjct: 793 ADDMGLGKTLQMLSFFKMKQKKKSPPSLVILPTTLLFNWENEIEKFTTGLSAYYHYGSARKKEVSLFDNYDLIISSYGVLVKDIEYLKDYKFHFIVLDESQAIKNPASQRYKAALLLQGKTKFALTGTPIENSTFDLYAQMNFVNPGFFGDIKSFKDNYSNKIDKEGNQEISQELQKITHPFILRRTKEQVVTELPPKTEDVIYCEMAKDQRAIYEAYRNKYRDEI-----------MSAIETDGVGKSKLMVLEGL 1038
BLAST of dna helicase vs. nr
Match: gi|1134209161|ref|WP_076451249.1| (hypothetical protein [Chryseobacterium piscicola] >gi|1131806019|emb|SIS79255.1| non-specific serine/threonine protein kinase [Chryseobacterium piscicola] >gi|1349738717|gb|PQA94841.1| hypothetical protein B0A70_06960 [Chryseobacterium piscicola]) HSP 1 Score: 251.521 bits (641), Expect = 1.373e-69 Identity = 124/253 (49.01%), Postives = 178/253 (70.36%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKKG--VSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKD----SIGESDPIRALHYV-SGVTNTRE 360 +DMGLGKTLQ +A L K++KK SL+I P SL+FNW E++KF P L ++ G R ++L ++ DV+I+TY ++ D+EV + F+Y ILDESQAIKN +S+RYK++RLLKS ++A++GTPIEN+TFDLYAQF+F+NPG+LG+ FK +F+ ID + TS++L KI+HPF+LRRTK VA +LPEK+ES++YCEME Q+K+Y+ + E +D I E ++ YV G+T R+ Sbjct: 801 ADDMGLGKTLQTIAFLQHLKITKKPKLPSLIIAPTSLVFNWENEMKKFCPSLKLLIYTGANRNENLEQFLNYDVIITTYGSLLNDVEVLKEKHFNYIILDESQAIKNPNSKRYKSVRLLKSFNRIALSGTPIENNTFDLYAQFNFLNPGILGNITHFKKEFSDAIDKEKEVATSQLLTKIIHPFILRRTKEQVATELPEKIESIIYCEMESEQRKVYDTFKNEYRDYLLNKINEHGVAKSQMYVLEGLTKLRQ 1053
BLAST of dna helicase vs. nr
Match: gi|1064049028|gb|ODT52648.1| (helicase SNF2 [Niastella sp. SCN 39-18] >gi|1113347995|gb|OJW11788.1| helicase SNF2 [Sphingobacteriales bacterium 39-19]) HSP 1 Score: 251.136 bits (640), Expect = 2.479e-69 Identity = 135/330 (40.91%), Postives = 205/330 (62.12%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKKGV-SLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDSI-GESDP----IRALHYVSGVTNTREGQSGLVV---RGGLPDQNLIMIDGVRVYN----------YAHLFGFLSFINSDMINDMTFYKAGIPAEYGGRSSSVVD 425 +DMGLGKT+Q L++L K + + + ++VI P +L++NW EI+KFTP L + +HHGN R + E +K D+VI+TY T+ D+++F K F Y ILDESQAIKN +S+ KA LL + +L M+GTP++N+TFD++AQ +F+NPGLLGS + F+++FAT ID G+++ + LRK+++PF+LRRTK VAKDLPEK E++L+CEM+PAQ+K+Y+A R +D I G D L + G+ R+ + LP++++ + + R ++ G L+ I +I IP EY S+S VD Sbjct: 819 ADDMGLGKTVQALSMLDHYKKTNEQLRAIVICPTTLIYNWQNEIKKFTPSLTHHIHHGNARIRKTEELEKYDIVITTYGTLRSDVQLFMKILFDYVILDESQAIKNPASKVTKAAGLLVAKNRLCMSGTPLQNNTFDIFAQMNFLNPGLLGSMEFFRNEFATPIDKFGEQEQKDHLRKLLYPFILRRTKEQVAKDLPEKTETILFCEMQPAQRKIYDAYRNSYRDKILGTIDEQGIDKSQLTILQGLMKLRQICDSPYILNEEEKLPNESIKLEELTREITENIGEHKALVFSQFLGMLALIKEKLI------AQNIPFEYFDGSTSTVD 1142
BLAST of dna helicase vs. nr
Match: gi|1176191509|gb|OQY04182.1| (hypothetical protein B6I20_03520 [Bacteroidetes bacterium 4572_117]) HSP 1 Score: 250.366 bits (638), Expect = 3.947e-69 Identity = 117/226 (51.77%), Postives = 161/226 (71.24%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDSI 340 +DMGLGKTLQ+L + KK +L++VP +LLFNW EI KF+P+L H+G R ++ +K D++ +TY T+ RDIE+ KF+Y ILDESQAIKN +S+RYKA L+ ++ K+AMTGTPIENSTFDL+AQ +F NPG+ GS K FKD ++ ID GD+ + L+KI++PF+LRRTK VA +LP+K E ++YCEMEP Q+K+Y+A R KD + Sbjct: 799 ADDMGLGKTLQILTFIQHLSKKKKSTNLIVVPTTLLFNWQNEIAKFSPKLKAFYHYGPNRKRETKHFKDYDLIFTTYGTLLRDIELLNTFKFNYLILDESQAIKNPASRRYKAAVLINANNKIAMTGTPIENSTFDLFAQMNFANPGMFGSLKGFKDNYSNPIDKDGDEIVAGELQKIINPFVLRRTKEKVASELPQKTEDIIYCEMEPEQRKVYDAYRNNYKDKL 1024
BLAST of dna helicase vs. nr
Match: gi|780083971|ref|WP_045465168.1| (DNA helicase [Sporocytophaga myxococcoides] >gi|695126357|dbj|GAL86038.1| non-specific serine/threonine protein kinase [Sporocytophaga myxococcoides]) HSP 1 Score: 249.595 bits (636), Expect = 4.268e-69 Identity = 123/251 (49.00%), Postives = 169/251 (67.33%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLA-LLLRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDSIGESDP----IRALHYVSGVTNTRE 360 +DMGLGKT+Q++A +LL++K + +L++VP SL++NW EIEKF P + HG R KD+S++ +V+I+TY T+ DI K+ F+Y ILDESQAIKN SQRYKA LL+S KL +TGTP+EN+TFDL+ QFSFV PGLLGS + FK ++ ID D ++ LRK +HPFLLRRTK VAK+LPEK E VLYCEM Q+ +Y+A ++D I + +H++ G+T R+ Sbjct: 685 ADDMGLGKTIQIIAFILLQRKKQTRNTNLIVVPASLIYNWQQEIEKFAPSIKAHTFHGAGRIKDISDFDNYEVIITTYGTLLSDISTLKKYSFNYVILDESQAIKNPESQRYKAACLLRSRNKLVLTGTPVENNTFDLFGQFSFVCPGLLGSKQQFKGHYSMPIDKFEDSGRAKELRKKIHPFLLRRTKRQVAKELPEKTEMVLYCEMGEQQRSIYDAYEQYMRDFIAARNEDELNKEHIHFLKGLTRLRQ 935
BLAST of dna helicase vs. nr
Match: gi|1237027911|ref|WP_095168250.1| (DNA helicase [Flectobacillus sp. BAB-3569] >gi|1236743696|gb|PAC26630.1| DNA helicase [Flectobacillus sp. BAB-3569]) HSP 1 Score: 247.669 bits (631), Expect = 7.695e-69 Identity = 128/251 (51.00%), Postives = 171/251 (68.13%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLALLLRQK-LSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDSIG---ESD-PIRALHYVSGVTNTRE 360 +DMGLGKTLQVLAL L QK S +LV+VP +L+FNW EIEKF P L V HG R ++ +++ DVVI+TY T+ D++ K+ F+Y +LDESQAIKN SQRYKA+ +L+S ++L MTGTPIEN+TFD+YAQFSF PGLLG+ + FK+ ++ ID D ++ L++ + PF+LRRTK VAK+LPEK E VLYCEM Q+++YEA E D + E D P LH + G+T R+ Sbjct: 572 ADDMGLGKTLQVLALFLWQKEKSILKTNLVVVPTTLIFNWLKEIEKFAPTLKVLVMHGPNRPENTLGFEEYDVVITTYHTLLSDVKFLRKYLFNYIVLDESQAIKNPESQRYKAVCMLQSRHRLVMTGTPIENNTFDIYAQFSFACPGLLGTKRFFKEYYSMPIDKFKDLPRAQELQQKIKPFVLRRTKQQVAKELPEKTEMVLYCEMSTEQRRVYEAYEREFWDYLNTKKEGDIPKERLHILQGLTKLRQ 822
BLAST of dna helicase vs. nr
Match: gi|1120176648|ref|WP_073045168.1| (DNA helicase [Cnuella takakiae] >gi|1132508744|gb|OLY94649.1| DNA helicase [Cnuella takakiae]) HSP 1 Score: 247.284 bits (630), Expect = 7.895e-69 Identity = 126/251 (50.20%), Postives = 171/251 (68.13%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLA-LLLRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDSIG---ESDPIR-ALHYVSGVTNTRE 360 +DMGLGKTLQV+A +LL Q+ KK LV+VP SLLFNW AE+ +F P L HHG R KD+ + DVV+++Y T+ DI ++ F Y LDESQ IKNI SQRY A RLL+S +LA+TGTPIEN+T DLYAQ SFVNPGLLG+ + F+D ++T ID G+ + L++ V PF+LRRTK VA++LP+K E VLYC M AQ+ +YEA E++D + + + +R ++H + G+T R+ Sbjct: 528 ADDMGLGKTLQVIAFMLLLQEGGKKETHLVVVPTSLLFNWKAELARFAPTLQVLTHHGADRNKDIKLFDNYDVVLTSYGTLLSDISYLRRYPFGYVFLDESQQIKNIGSQRYHAARLLQSRNRLAITGTPIENNTLDLYAQISFVNPGLLGNKQYFRDVYSTPIDRFGESRRAAELQQKVTPFILRRTKEAVAQELPDKTEQVLYCPMGEAQRAVYEAYEAELRDYLEGKMQDEILRNSIHVLRGLTQLRQ 778
BLAST of dna helicase vs. nr
Match: gi|1110426435|emb|SHF80258.1| (Superfamily II DNA or RNA helicase, SNF2 family [Cnuella takakiae]) HSP 1 Score: 247.284 bits (630), Expect = 8.384e-69 Identity = 126/251 (50.20%), Postives = 171/251 (68.13%), Query Frame = 0 Query: 115 GNDMGLGKTLQVLA-LLLRQKLSKKGVSLVIVPRSLLFNWAAEIEKFTPQLDYTVHHGNTRTKDLSEYKKMDVVISTYDTVSRDIEVFAKHKFHYTILDESQAIKNISSQRYKAMRLLKSDYKLAMTGTPIENSTFDLYAQFSFVNPGLLGSAKSFKDKFATRIDGLGDKDTSEMLRKIVHPFLLRRTKGNVAKDLPEKLESVLYCEMEPAQKKLYEALRIEIKDSIG---ESDPIR-ALHYVSGVTNTRE 360 +DMGLGKTLQV+A +LL Q+ KK LV+VP SLLFNW AE+ +F P L HHG R KD+ + DVV+++Y T+ DI ++ F Y LDESQ IKNI SQRY A RLL+S +LA+TGTPIEN+T DLYAQ SFVNPGLLG+ + F+D ++T ID G+ + L++ V PF+LRRTK VA++LP+K E VLYC M AQ+ +YEA E++D + + + +R ++H + G+T R+ Sbjct: 525 ADDMGLGKTLQVIAFMLLLQEGGKKETHLVVVPTSLLFNWKAELARFAPTLQVLTHHGADRNKDIKLFDNYDVVLTSYGTLLSDISYLRRYPFGYVFLDESQQIKNIGSQRYHAARLLQSRNRLAITGTPIENNTLDLYAQISFVNPGLLGNKQYFRDVYSTPIDRFGESRRAAELQQKVTPFILRRTKEAVAQELPDKTEQVLYCPMGEAQRAVYEAYEAELRDYLEGKMQDEILRNSIHVLRGLTQLRQ 775 The following BLAST results are available for this feature:
BLAST of dna helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 16
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BLAST of dna helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of dna helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1360_size45726:25709..41984- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1360_size45726-snap-gene-0.1 ID=maker-scaffold1360_size45726-snap-gene-0.1|Name=dna helicase|organism=Tigriopus kingsejongensis|type=gene|length=16276bp|location=Sequence derived from alignment at scaffold1360_size45726:25709..41984- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'dna helicase' has the following synonyms
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