PREDICTED: uncharacterized protein LOC100888786, maker-scaffold1375_size44572-snap-gene-0.11 (gene) Tigriopus kingsejongensis

Overview
NamePREDICTED: uncharacterized protein LOC100888786
Unique Namemaker-scaffold1375_size44572-snap-gene-0.11
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of PREDICTED: uncharacterized protein LOC100888786 vs. L. salmonis genes
Match: EMLSAG00000005333 (supercontig:LSalAtl2s:LSalAtl2s286:45599:179721:1 gene:EMLSAG00000005333 transcript:EMLSAT00000005333 description:"maker-LSalAtl2s286-augustus-gene-1.20")

HSP 1 Score: 57.7658 bits (138), Expect = 5.315e-12
Identity = 28/69 (40.58%), Postives = 46/69 (66.67%), Query Frame = 0 
Query:    1 MAMPKQFADLLDNHGDTLQQMALLAYLKRGDSAKPFLEAITTAKVCKDVFQY-LSKDDAAIEQARGEAI 68
            MA+P   +++LDN+GDT+++MA +AYL   D AKP ++ ITTA++  +  ++ L  +D  IE  R E +
Sbjct:  695 MALPSLISNVLDNYGDTMEKMAWMAYLTNED-AKPLVQTITTARIYNNTTKHLLGSNDDKIEAXRLEXV 762
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BLAST of PREDICTED: uncharacterized protein LOC100888786 vs. nr
Match: gi|1325258956|ref|XP_023326898.1| (uncharacterized protein LOC111700253 isoform X1 [Eurytemora affinis])

HSP 1 Score: 68.5514 bits (166), Expect = 1.853e-13
Identity = 30/66 (45.45%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:    1 MAMPKQFADLLDNHGDTLQQMALLAYLKRGDSAKPFLEAITTAKVCKDVFQYLSKDDAAIEQARGE 66
            M++P+  A +LD HGD++QQ ALLAYL++G+ A+ +LE IT A++C   +++ SK+D  ++ AR E
Sbjct:    1 MSLPQLLAGVLDKHGDSMQQAALLAYLRQGEDAQQYLETITAARLCMSAYKHFSKED-ELDAARAE 65
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BLAST of PREDICTED: uncharacterized protein LOC100888786 vs. nr
Match: gi|1325258961|ref|XP_023326906.1| (uncharacterized protein LOC111700253 isoform X2 [Eurytemora affinis])

HSP 1 Score: 68.5514 bits (166), Expect = 1.915e-13
Identity = 30/66 (45.45%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:    1 MAMPKQFADLLDNHGDTLQQMALLAYLKRGDSAKPFLEAITTAKVCKDVFQYLSKDDAAIEQARGE 66
            M++P+  A +LD HGD++QQ ALLAYL++G+ A+ +LE IT A++C   +++ SK+D  ++ AR E
Sbjct:    1 MSLPQLLAGVLDKHGDSMQQAALLAYLRQGEDAQQYLETITAARLCMSAYKHFSKED-ELDAARAE 65
The following BLAST results are available for this feature:
BLAST of PREDICTED: uncharacterized protein LOC100888786 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000053335.315e-1240.58supercontig:LSalAtl2s:LSalAtl2s286:45599:179721:1 ... [more]
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BLAST of PREDICTED: uncharacterized protein LOC100888786 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of PREDICTED: uncharacterized protein LOC100888786 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 2
Match NameE-valueIdentityDescription
gi|1325258956|ref|XP_023326898.1|1.853e-1345.45uncharacterized protein LOC111700253 isoform X1 [E... [more]
gi|1325258961|ref|XP_023326906.1|1.915e-1345.45uncharacterized protein LOC111700253 isoform X2 [E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1375_size44572supercontigscaffold1375_size44572:4520..4915 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1375_size44572-snap-gene-0.11-mRNA-1maker-scaffold1375_size44572-snap-gene-0.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1375_size44572:4520..4915+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1375_size44572-snap-gene-0.11 ID=maker-scaffold1375_size44572-snap-gene-0.11|Name=PREDICTED: uncharacterized protein LOC100888786|organism=Tigriopus kingsejongensis|type=gene|length=396bp|location=Sequence derived from alignment at scaffold1375_size44572:4520..4915+ (Tigriopus kingsejongensis)
GCAAGGAAAGGAGGGATAGGAGAGAGAAGAAGAGCAAGAAGAAGAAAGTG
AAATCGCGCAGGAGACGCTCTGAATAAGTGTTTTGCTGATCGAGTTGTAT
TTTGGAATAAATAGACGCGTAGTATGGCTATGCCCAAACAATTTGCTGAT
CTTCTGGACAACCATGGCGATACCCTCCAACAAATGGCTCTTCTGGCCTA
CTTGAAGCGAGGTGACTCGGCCAAACCATTTCTGGAAGCCATCACCACGG
CCAAGGTATGCAATTTTAGGGTGTGCCAAAGATTGGAGAGATAATTGGGA
TGTTTTCCATCGTAGGTGTGCAAGGATGTGTTTCAGTACTTGTCCAAAGA
TGATGCCGCGATCGAGCAAGCCAGAGGAGAGGCGATCTAAATAACC
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Synonyms
The feature 'PREDICTED: uncharacterized protein LOC100888786' has the following synonyms
Synonym
Tk03933
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