mediator of rna polymerase ii transcription subunit 19, maker-scaffold1414_size42706-snap-gene-0.13 (gene) Tigriopus kingsejongensis

Overview
Namemediator of rna polymerase ii transcription subunit 19
Unique Namemaker-scaffold1414_size42706-snap-gene-0.13
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. L. salmonis genes
Match: EMLSAG00000000424 (supercontig:LSalAtl2s:LSalAtl2s1068:100211:101379:-1 gene:EMLSAG00000000424 transcript:EMLSAT00000000424 description:"maker-LSalAtl2s1068-augustus-gene-1.18")

HSP 1 Score: 185.267 bits (469), Expect = 2.165e-58
Identity = 94/144 (65.28%), Postives = 110/144 (76.39%), Query Frame = 0
Query:   12 GSRSPNVA--NASDPSGLKVTISLK-------QKTPFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQS 146
            GSRSP V+  N +    LK++I+L        QK PFYL++ E   +N+ TGATNLM + GLEHSY+KLT KKMK SLSSFL ++ GI+DTPGSQDNSSLRGIIEKPPVCGKEL PLNQLQL+GFRLHPGPLPEQY  L  + S
Sbjct:   82 GSRSPIVSGMNIAGSESLKLSIALSGQKPTIIQKGPFYLMKQEHTLSNEITGATNLMASKGLEHSYSKLTAKKMKNSLSSFLQNLPGIVDTPGSQDNSSLRGIIEKPPVCGKELMPLNQLQLAGFRLHPGPLPEQYSCLTQIAS 225          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. SwissProt
Match: gi|122117713|sp|Q174D3.1|MED19_AEDAE (RecName: Full=Mediator of RNA polymerase II transcription subunit 19; AltName: Full=Mediator complex subunit 19)

HSP 1 Score: 162.155 bits (409), Expect = 1.931e-48
Identity = 100/201 (49.75%), Postives = 124/201 (61.69%), Query Frame = 0
Query:    1 MDNYSPKHSPH----GSRSPNVANASDPSGLKVTI------SLKQKTPFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRH 191
            ++ YSPK SP     G RSP VA       LK TI      S+    PFYL++ EP    + TGATNLM   GLEHSY+K + KK+KE LSSFLP++ G+ID PG  DNSSLR +IEKPP+ GK+L PL  +QL+GFRLHPGPLPEQY+ L  V +RK     K    + G +A  +     E+ G +  EKK  KK KRH
Sbjct:   17 VEQYSPKSSPRAGGAGGRSPVVARQDSSGTLKTTIQLGKNPSIVHSGPFYLMK-EPPGEGELTGATNLMAHYGLEHSYSKFSGKKVKEQLSSFLPNLPGVIDGPGHLDNSSLRSVIEKPPIGGKDLLPLTSVQLAGFRLHPGPLPEQYKHLKSVPTRKHKNKHKKHKYKEG-VAPLSEQSALEASGLDTHEKKH-KKQKRH 214          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. SwissProt
Match: gi|123884037|sp|Q07FY3.1|MED19_XENTR (RecName: Full=Mediator of RNA polymerase II transcription subunit 19; AltName: Full=Mediator complex subunit 19)

HSP 1 Score: 131.724 bits (330), Expect = 9.593e-37
Identity = 64/108 (59.26%), Postives = 79/108 (73.15%), Query Frame = 0
Query:   38 PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQ 145
            PFY+LR  P   +D TG+ NL++   LEHS++K   KKMKE LS+FLP + G+IDTPG+QDNSSLR +IEKPP+CG    PL    L+GFRLH GPLPEQ R L H+Q
Sbjct:   73 PFYILRELPG-LSDLTGSVNLILHYNLEHSFSKFCGKKMKEKLSNFLPDLPGMIDTPGAQDNSSLRSLIEKPPICGNSFTPLTGALLTGFRLHTGPLPEQCR-LMHIQ 178          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. SwissProt
Match: gi|82085452|sp|Q6DRL8.1|MD19B_DANRE (RecName: Full=Mediator of RNA polymerase II transcription subunit 19-B; AltName: Full=Mediator complex subunit 19-B)

HSP 1 Score: 130.183 bits (326), Expect = 3.178e-36
Identity = 65/108 (60.19%), Postives = 77/108 (71.30%), Query Frame = 0
Query:   38 PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQ 145
            PFYLLR  P+  N+ TG TNL+    LEH+Y K   KK+KE LS+FLP + G+ID+PG QDNSSLR +IEKPPVC     PL    L+GFRLH GPLPEQYR L H+Q
Sbjct:   61 PFYLLRELPM-ENELTGHTNLITHYNLEHAYNKFCGKKVKEKLSNFLPELPGMIDSPGIQDNSSLRSLIEKPPVCNNSFSPLTGAMLTGFRLHTGPLPEQYR-LMHIQ 166          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. SwissProt
Match: gi|82178926|sp|Q5EAY2.1|MED19_XENLA (RecName: Full=Mediator of RNA polymerase II transcription subunit 19; AltName: Full=Mediator complex subunit 19)

HSP 1 Score: 127.872 bits (320), Expect = 2.361e-35
Identity = 75/161 (46.58%), Postives = 96/161 (59.63%), Query Frame = 0
Query:   38 PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRHEKDAEER 198
            PFYLLR  P   +D T + NL++   LEHS++K   KK+KE LS+FLP + G+IDTPG+ DNSSLR +IEKPP+CG    PL    L+GFRLH GPLPEQ R L H+Q  KK   K  +         +TP+  +           R+KK K+ E D E R
Sbjct:   64 PFYLLRELPG-LSDLTASINLILHYNLEHSFSKFCGKKVKEKLSNFLPDLPGMIDTPGTPDNSSLRSLIEKPPICGNAFTPLTGALLTGFRLHTGPLPEQCR-LMHIQPPKKKNKKHKQSRTQEPAPPETPSDSDH----------RKKKKKQREDDPERR 212          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. SwissProt
Match: gi|123908282|sp|Q08C81.1|MD19A_DANRE (RecName: Full=Mediator of RNA polymerase II transcription subunit 19-A; AltName: Full=Mediator complex subunit 19-A)

HSP 1 Score: 123.25 bits (308), Expect = 1.651e-33
Identity = 87/179 (48.60%), Postives = 108/179 (60.34%), Query Frame = 0
Query:   38 PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRHEKDAE-ERKKKKKEKKKKRSKEEKD 215
            PFYLLR  P+  ND TG TNL+    LEH+Y K   KK+KE LS+FLP + G+ID PG QD SSLR +IEKPPVCG    PL    L+GFRLH GPLPEQYR L H+Q  KK    KH+H                 +     E + +   K+ +KD E ER+KKKK+KKKK+++   D
Sbjct:   65 PFYLLRELPV-GNDLTGNTNLITHYNLEHAYNKFCGKKVKEKLSNFLPELPGMIDCPGVQDGSSLRSLIEKPPVCGNSFSPLTGALLTGFRLHTGPLPEQYR-LMHIQPPKKKSKHKHRHH--------------HPQDPLPLETRTDPTKKKKKKDNEPERRKKKKDKKKKKNRHSPD 227          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. SwissProt
Match: gi|81898503|sp|Q8C1S0.1|MED19_MOUSE (RecName: Full=Mediator of RNA polymerase II transcription subunit 19; AltName: Full=Mediator complex subunit 19)

HSP 1 Score: 118.627 bits (296), Expect = 9.513e-32
Identity = 68/123 (55.28%), Postives = 82/123 (66.67%), Query Frame = 0
Query:   38 PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRN 160
            PFYL+R  P  T + TG+TNL+    LE +Y K   KK+KE LS+FLP + G+ID PGS DNSSLR +IEKPP+ G   +P+    LSGFRLH GPLPEQ R L H+Q  KK    KHK SR 
Sbjct:   64 PFYLMRELPGST-ELTGSTNLITHYNLEQAYNKFCGKKVKEKLSNFLPDLPGMIDLPGSHDNSSLRSLIEKPPILGGSFNPITGTMLSGFRLHTGPLPEQCR-LMHIQPPKKKNKHKHKQSRT 184          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. SwissProt
Match: gi|74871201|sp|Q9VVL6.1|MED19_DROME (RecName: Full=Mediator of RNA polymerase II transcription subunit 19; AltName: Full=Mediator complex subunit 19)

HSP 1 Score: 117.857 bits (294), Expect = 1.262e-30
Identity = 93/204 (45.59%), Postives = 114/204 (55.88%), Query Frame = 0
Query:    1 MDNY-----SPKHSPHGS-RSPNVANASDPSGLKVTISLKQK------TPFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPG-SQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRH 191
            M NY     SPK SPHG  RSP VA       LK TISL +        PFY ++ EP    + TG  +LM   GL H+  K   KK KESL+SFL ++ GI D      +NS+LR +IEKPP+ GKEL PL  +QL+GFRLHPGPLPEQYR      +RK     K +  ++G   G   +   +S G E  EKK  KK KRH
Sbjct:    2 MSNYGNMMDSPKSSPHGGGRSPVVARQDSSGTLKTTISLGKTPTIIHTGPFYSMK-EPPAKAELTGDKDLMTEYGLHHTLTKFKEKKFKESLASFLQNIPGINDLITHPVENSTLRSVIEKPPIGGKELLPLTPVQLAGFRLHPGPLPEQYRTTYVTPARKHKNKHKKQKHKDGVTTGQE-STLLDSAGLETYEKKH-KKQKRH 202          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. SwissProt
Match: gi|158705879|sp|A0JLT2.2|MED19_HUMAN (RecName: Full=Mediator of RNA polymerase II transcription subunit 19; AltName: Full=Lung cancer metastasis-related protein 1; AltName: Full=Mediator complex subunit 19)

HSP 1 Score: 115.161 bits (287), Expect = 2.005e-30
Identity = 66/122 (54.10%), Postives = 81/122 (66.39%), Query Frame = 0
Query:   38 PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSR 159
            PFYL+R  P  T + TG+TNL+    LE +Y K   KK+KE LS+FLP + G+ID PGS DNSSLR +IEKPP+     +P+    L+GFRLH GPLPEQ R L H+Q  KK    KHK SR
Sbjct:   64 PFYLMRELPGST-ELTGSTNLITHYNLEQAYNKFCGKKVKEKLSNFLPDLPGMIDLPGSHDNSSLRSLIEKPPILSSSFNPITGTMLAGFRLHTGPLPEQCR-LMHIQPPKKKNKHKHKQSR 183          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. SwissProt
Match: gi|75023173|sp|Q9N4F2.1|MED19_CAEEL (RecName: Full=Mediator of RNA polymerase II transcription subunit 19; AltName: Full=Mediator complex subunit 19)

HSP 1 Score: 67.0106 bits (162), Expect = 1.301e-12
Identity = 40/113 (35.40%), Postives = 66/113 (58.41%), Query Frame = 0
Query:   38 PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLT-TKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKK 149
            PFY L+    P ++  G  +L+++  L       + ++++KE +SSFLPH+ G      +++ SSLR +IEKPP+  KE+  L    + GF+L  GP+ E+YR   H+  R+K
Sbjct:   21 PFYTLKALLPPYSEIQGNHDLLMSYELGPVEGGFSGSRRVKEKISSFLPHIIGEFHLDATKEASSLRALIEKPPI-HKEISNLTSSSMQGFKLSAGPVDERYR---HLFERRK 129          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Match: gi|755947505|ref|XP_011300488.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 19 [Fopius arisanus])

HSP 1 Score: 184.882 bits (468), Expect = 5.050e-55
Identity = 104/199 (52.26%), Postives = 127/199 (63.82%), Query Frame = 0
Query:    1 MDNYSPKHSPHGSRSPNVANASDPSGLKVTISLKQKT------PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRHEK 193
            ++ YSPK SP G+RSP V+       LK TISL +        PFYL++ EP   +D TGATNLM   GLEHSY+K + KK+KE LSSFLP++ GIIDTPG QDNSSLR +IEKPP+ GKEL PL  +QLSGFRLHPGPLPEQYR +     RK     K    +     G+ PAG E +  D       EKKHK+ ++
Sbjct:   11 VEQYSPKSSPRGARSPVVSRQDSTGTLKTTISLGKNPSIVHSGPFYLMK-EPPGESDLTGATNLMAYYGLEHSYSKFSGKKLKEQLSSFLPNLPGIIDTPGDQDNSSLRSVIEKPPIVGKELLPLTSVQLSGFRLHPGPLPEQYRYVNQAPQRKHKNKHKKHKHK----PGEVPAGQEVAATDISGADTHEKKHKKQKR 204          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Match: gi|970881416|ref|XP_015117041.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 19 [Diachasma alloeum])

HSP 1 Score: 184.882 bits (468), Expect = 5.274e-55
Identity = 104/199 (52.26%), Postives = 127/199 (63.82%), Query Frame = 0
Query:    1 MDNYSPKHSPHGSRSPNVANASDPSGLKVTISLKQKT------PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRHEK 193
            ++ YSPK SP G+RSP V+       LK TISL +        PFYL++ EP   +D TGATNLM   GLEHSY+K + KK+KE LSSFLP++ GIIDTPG QDNSSLR +IEKPP+ GKEL PL  +QLSGFRLHPGPLPEQYR +     RK     K    +     G+ PAG E +  D       EKKHK+ ++
Sbjct:   11 VEQYSPKSSPRGARSPVVSRQDSTGTLKTTISLGKNPSIVHSGPFYLMK-EPPGESDLTGATNLMAYYGLEHSYSKFSGKKLKEQLSSFLPNLPGIIDTPGDQDNSSLRSVIEKPPIVGKELLPLTSVQLSGFRLHPGPLPEQYRYVNQAPQRKHKNKHKKHKHK----PGEVPAGQEIAATDISGADTHEKKHKKQKR 204          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Match: gi|817055558|ref|XP_012268601.1| (mediator of RNA polymerase II transcription subunit 19 [Athalia rosae])

HSP 1 Score: 184.111 bits (466), Expect = 1.015e-54
Identity = 103/199 (51.76%), Postives = 127/199 (63.82%), Query Frame = 0
Query:    1 MDNYSPKHSPHGSRSPNVANASDPSGLKVTISLKQKT------PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRHEK 193
            ++ YSPK SP G+RSP V+       LK TISL +        PFYL++ EP   ++ TGATNLM   GLEHSY+K + KK+KE LSSFLP++ GIID PG QDNSSLR +IEKPP+CGKEL PL  +QL+GFRLHPGPLPEQYR +     RK     K    +     G+TP+G E +  D       EKKHK+  K
Sbjct:   11 VEQYSPKSSPRGARSPVVSRQDSTGTLKTTISLGKNPSIVHSGPFYLMK-EPPGESELTGATNLMAYYGLEHSYSKFSGKKLKEQLSSFLPNLPGIIDAPGHQDNSSLRSVIEKPPICGKELLPLTSVQLAGFRLHPGPLPEQYRYINQAPQRKHKNKHKKHKHK----PGETPSGQETATTDIGGPDTHEKKHKKQRK 204          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Match: gi|1325333164|ref|XP_023348431.1| (mediator of RNA polymerase II transcription subunit 19-like [Eurytemora affinis])

HSP 1 Score: 182.57 bits (462), Expect = 1.349e-54
Identity = 111/193 (57.51%), Postives = 141/193 (73.06%), Query Frame = 0
Query:    1 MDNYSPKHSPHGSRSPNVANASDPSGLKVTISLKQKTPFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRG-LAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRHE 192
            M+ +SPK+SP    S    N++DP  LKV + + +  PFYLL+P+ I  +D TGATNLM +  LEHS+ KL +KKMK+SLSSFLP + GI+DTPGSQDNSSLRG+IEKPPV GKEL  LNQLQL+GFRLHPGPLPEQYR  L HV  ++K + KK K         +TPA  ++   DEER++KRE+KHK+H+
Sbjct:    1 METFSPKNSPSRGSSSPSINSTDPGMLKVKLQINKPLPFYLLKPDNIAISDVTGATNLMASRNLEHSFNKLASKKMKDSLSSFLPGLPGIVDTPGSQDNSSLRGLIEKPPVGGKELTLLNQLQLTGFRLHPGPLPEQYRAVLNHVAGKEKKRTKKRKSR-----GTETPA--QDELRDEERDRKRERKHKKHD 186          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Match: gi|225718598|gb|ACO15145.1| (Mediator of RNA polymerase II transcription subunit 19 [Caligus clemensi])

HSP 1 Score: 183.341 bits (464), Expect = 1.834e-54
Identity = 103/153 (67.32%), Postives = 121/153 (79.08%), Query Frame = 0
Query:   25 SGLKVTISLKQKTPFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGD 177
            SG+K TI   QK PFYL++ +   +++ TGATNLM + GLEHSY+KLT KKMK +LSSFL ++ GI+DTPGSQDNSSLRGIIEKPPVCGKEL PLNQLQL+GFRLHPGPLPEQY  L  +QS+KK KHKKHK+       G+TP GG ES GD
Sbjct:   54 SGVKPTI--IQKGPFYLMKQDITLSHEITGATNLMASKGLEHSYSKLTAKKMKNTLSSFLQNLPGIVDTPGSQDNSSLRGIIEKPPVCGKELLPLNQLQLAGFRLHPGPLPEQYSCLTQIQSKKKQKHKKHKYKT----GGETP-GGVESTGD 199          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Match: gi|1041548443|ref|XP_008480112.2| (PREDICTED: mediator of RNA polymerase II transcription subunit 19 [Diaphorina citri])

HSP 1 Score: 180.644 bits (457), Expect = 1.426e-53
Identity = 101/200 (50.50%), Postives = 126/200 (63.00%), Query Frame = 0
Query:    1 MDNYSPKHSPHGSRSPNVANASDPSGLKVTISLKQK------TPFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRHEKD 194
            M+ YSPK SP GSRSP V+       LK TISL +        PFYL++ EP   ++ TG+ NLM + GLEH+Y K   KK+KESLSSFLP++ GIID PGSQDNSSLR +IEKPP+CGKE+ PL  +QL+GFRLHPG LPEQYR    V S++     K    + G  +      G+ S  D    +K+ KK KRH  D
Sbjct:    9 MEQYSPKTSPRGSRSPIVSRQDTTGTLKTTISLGKNPSIVHSGPFYLMK-EPPGKSEKTGSVNLMASYGLEHTYNKFCGKKLKESLSSFLPNLPGIIDAPGSQDNSSLRSVIEKPPICGKEILPLTSVQLAGFRLHPGNLPEQYRIANQVASKRHKNKHKKHKYKTGDTSNPDANMGDVSYSDS--HEKKHKKQKRHNDD 205          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Match: gi|939277137|ref|XP_014259070.1| (mediator of RNA polymerase II transcription subunit 19 [Cimex lectularius])

HSP 1 Score: 180.644 bits (457), Expect = 2.129e-53
Identity = 102/200 (51.00%), Postives = 129/200 (64.50%), Query Frame = 0
Query:    1 MDNYSPKHSPHGSRSPNVANASDPSGLKVTISLKQ------KTPFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGE--ESKGDEEREKKREKKHKRHE 192
            ++ YSPK SP G+RSP V+       LK TISL +        PFYL++ EP   +D TGA NLM A GLEH+Y+K + KK+KE LSSFLP++ GIIDTPG QDNSSLR +IEKPP+ GKEL PL  +QL+GFRLHPGPLPEQYR +    ++K     K    +     G    GGE   S+G  +  +K+ KK KRH+
Sbjct:   10 VEQYSPKSSPRGARSPVVSRQDSTGTLKTTISLGKHPSIVHSGPFYLMK-EPPAESDLTGAVNLMAAYGLEHTYSKFSGKKVKEQLSSFLPNLPGIIDTPGHQDNSSLRSVIEKPPIIGKELRPLTSVQLAGFRLHPGPLPEQYRYVNQAPTKKHKSKHKKHKHKADGAGG----GGELSASEGGVDTHEKKHKKQKRHD 204          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Match: gi|1317996738|ref|XP_023290099.1| (mediator of RNA polymerase II transcription subunit 19 isoform X1 [Orussus abietinus])

HSP 1 Score: 179.874 bits (455), Expect = 3.931e-53
Identity = 99/198 (50.00%), Postives = 124/198 (62.63%), Query Frame = 0
Query:    2 DNYSPKHSPHGSRSPNVANASDPSGLKVTISLKQKT------PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRHEK 193
            + YSPK SP G+RSP V+       LK TISL +        PFYL++  P   ++ TGATNLM   GLEHSY+K + KK KE LSSFLP++ GI+DTPG +DNSSLR +I+KPP+CGKEL PL  +QL+GFRLHPGPLPEQYR +     RK     K    +     GD P G E +  D       EKKHK+ ++
Sbjct:   11 EQYSPKSSPRGARSPVVSRQDSTGTLKTTISLGKNPSIVHSGPFYLMKEPPAGESELTGATNLMAYYGLEHSYSKFSGKKPKEQLSSFLPNLPGIVDTPGHRDNSSLRSVIDKPPICGKELLPLTSVQLAGFRLHPGPLPEQYRYVNQAPQRKHKNKHKKHKHK----PGDVPGGQETATTDIGGPDTHEKKHKKQKR 204          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Match: gi|665785747|ref|XP_008548848.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 19 [Microplitis demolitor])

HSP 1 Score: 179.104 bits (453), Expect = 9.067e-53
Identity = 103/199 (51.76%), Postives = 125/199 (62.81%), Query Frame = 0
Query:    1 MDNYSPKHSPHGSRSPNVANASDPSGLKVTISLKQKT------PFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRHEK 193
            ++ YSPK SP G+RSP V+       LK TISL +        PFYL++ EP   ++ TGATNLM   GLEHSY+K + KK+KE LSSFLP + G IDTPG QDNSSLR +IEKPP+ GKEL PL  +QLSGFRLHPGPLPEQYR +     RK     K    +     GD PAG E +  D       EKKHK+ ++
Sbjct:   11 VEQYSPKSSPRGARSPVVSRQDSTGTLKTTISLGKNPSIVHSGPFYLMK-EPPGESELTGATNLMAYYGLEHSYSKFSGKKLKEQLSSFLPSLPGTIDTPGHQDNSSLRSVIEKPPIGGKELLPLTSVQLSGFRLHPGPLPEQYRYVNQAPQRKHKNKHKKHKHK----PGDVPAGQEIATTDIGGPDTHEKKHKKQKR 204          
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Match: gi|749731328|ref|XP_011154796.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 19 [Harpegnathos saltator] >gi|749731330|ref|XP_011154806.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19 [Harpegnathos saltator] >gi|749731332|ref|XP_011154815.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19 [Harpegnathos saltator] >gi|307215207|gb|EFN89979.1| Mediator of RNA polymerase II transcription subunit 19 [Harpegnathos saltator])

HSP 1 Score: 178.333 bits (451), Expect = 1.594e-52
Identity = 102/198 (51.52%), Postives = 126/198 (63.64%), Query Frame = 0
Query:    1 MDNYSPKHSPHGSRSPNVANASDPSGLKVTISLKQK------TPFYLLRPEPIPTNDTTGATNLMVASGLEHSYAKLTTKKMKESLSSFLPHMAGIIDTPGSQDNSSLRGIIEKPPVCGKELHPLNQLQLSGFRLHPGPLPEQYRGLAHVQSRKKHKHKKHKHSRNGAMAGDTPAGGEESKGDEEREKKREKKHKRHE 192
            ++ YSPK SP G+RSP V+       LK TISL +        PFYL++ EP   ++ TGATNLM   GLEHSY+K + KK+KE LSSFLP++ GIID PG QDNSSLR +IEKPP+ GKEL PL  +QL+GFRLHPGPLPEQYR +     RK     K    + G + G   A   +  G +  EKK  KK KRH+
Sbjct:   11 VEQYSPKSSPRGARSPVVSRQDSTGTLKTTISLGKNPSIVHSGPFYLMK-EPPGESELTGATNLMAYYGLEHSYSKFSGKKLKEQLSSFLPNLPGIIDRPGHQDNSSLRSVIEKPPIGGKELLPLTSVQLAGFRLHPGPLPEQYRYVNQAPQRKHKNKHKKHKHKPGEVLGGQEATTTDVGGSDTHEKKH-KKQKRHD 206          
The following BLAST results are available for this feature:
BLAST of mediator of rna polymerase ii transcription subunit 19 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000004242.165e-5865.28supercontig:LSalAtl2s:LSalAtl2s1068:100211:101379:... [more]
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BLAST of mediator of rna polymerase ii transcription subunit 19 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
gi|122117713|sp|Q174D3.1|MED19_AEDAE1.931e-4849.75RecName: Full=Mediator of RNA polymerase II transc... [more]
gi|123884037|sp|Q07FY3.1|MED19_XENTR9.593e-3759.26RecName: Full=Mediator of RNA polymerase II transc... [more]
gi|82085452|sp|Q6DRL8.1|MD19B_DANRE3.178e-3660.19RecName: Full=Mediator of RNA polymerase II transc... [more]
gi|82178926|sp|Q5EAY2.1|MED19_XENLA2.361e-3546.58RecName: Full=Mediator of RNA polymerase II transc... [more]
gi|123908282|sp|Q08C81.1|MD19A_DANRE1.651e-3348.60RecName: Full=Mediator of RNA polymerase II transc... [more]
gi|81898503|sp|Q8C1S0.1|MED19_MOUSE9.513e-3255.28RecName: Full=Mediator of RNA polymerase II transc... [more]
gi|74871201|sp|Q9VVL6.1|MED19_DROME1.262e-3045.59RecName: Full=Mediator of RNA polymerase II transc... [more]
gi|158705879|sp|A0JLT2.2|MED19_HUMAN2.005e-3054.10RecName: Full=Mediator of RNA polymerase II transc... [more]
gi|75023173|sp|Q9N4F2.1|MED19_CAEEL1.301e-1235.40RecName: Full=Mediator of RNA polymerase II transc... [more]
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BLAST of mediator of rna polymerase ii transcription subunit 19 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|755947505|ref|XP_011300488.1|5.050e-5552.26PREDICTED: mediator of RNA polymerase II transcrip... [more]
gi|970881416|ref|XP_015117041.1|5.274e-5552.26PREDICTED: mediator of RNA polymerase II transcrip... [more]
gi|817055558|ref|XP_012268601.1|1.015e-5451.76mediator of RNA polymerase II transcription subuni... [more]
gi|1325333164|ref|XP_023348431.1|1.349e-5457.51mediator of RNA polymerase II transcription subuni... [more]
gi|225718598|gb|ACO15145.1|1.834e-5467.32Mediator of RNA polymerase II transcription subuni... [more]
gi|1041548443|ref|XP_008480112.2|1.426e-5350.50PREDICTED: mediator of RNA polymerase II transcrip... [more]
gi|939277137|ref|XP_014259070.1|2.129e-5351.00mediator of RNA polymerase II transcription subuni... [more]
gi|1317996738|ref|XP_023290099.1|3.931e-5350.00mediator of RNA polymerase II transcription subuni... [more]
gi|665785747|ref|XP_008548848.1|9.067e-5351.76PREDICTED: mediator of RNA polymerase II transcrip... [more]
gi|749731328|ref|XP_011154796.1|1.594e-5251.52PREDICTED: mediator of RNA polymerase II transcrip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1414_size42706supercontigscaffold1414_size42706:17698..18771 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:regulation of transcription from RNA polymerase II promoter
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1414_size42706-snap-gene-0.13-mRNA-1maker-scaffold1414_size42706-snap-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1414_size42706:17698..18771-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1414_size42706-snap-gene-0.13 ID=maker-scaffold1414_size42706-snap-gene-0.13|Name=mediator of rna polymerase ii transcription subunit 19|organism=Tigriopus kingsejongensis|type=gene|length=1074bp|location=Sequence derived from alignment at scaffold1414_size42706:17698..18771- (Tigriopus kingsejongensis)
CCCCGGTCGAGGTGGCCCAACCAGCCCCTCAGCCCAGCCAGTCCGGTGCG GCCCCGGTTGTGTGAGCCCGGATAGCATCCGCCAGACCCAGCCATTGGCG ACGAAGCCCAAGCGCCTCCACCGTATTGTCCGTGCTCCATGCCGCTCCCA ACATGTTCTTGGAACTCTGGCTCGTTTTTGTAGCCTATTTGCTCATCCAC TTAATTCTTTAAGTGAGAGACCAGTGCCTGACACCCCATTCTCCCGAGTG GTTAGCCATCCTCCCGCCGAGGCGTGCCCATTGAACACTCAGGATGGACA ACTACTCGCCCAAGCACTCGCCGCATGGCTCCAGGTCGCCCAATGTGGCC AATGCCTCTGATCCTTCGGGGTTAAAAGTGACGATTTCCCTCAAGCAGAA AACTCCCTTTTATCTTTTGAGGCCCGAGCCCATTCCCACCAATGACACGA CTGGAGCCACCAACCTCATGGTGGCTAGTGGTCTGGAGCATTCCTACGCC AAGCTCACCAGTAAGTCTCCCGGCTGTCCGTCCCGAAACGAACCAATAAC ATGGTTGGTGGTTTTTTTTTTTTTCAGCCAAGAAGATGAAAGAGTCCCTC TCCTCATTCCTTCCTCATATGGCAGGCATCATCGACACGCCTGGGAGCCA GGACAACAGTTCGCTTCGAGGCATCATCGAAAAACCTCCCGGTAAGTCTC GATTTTTCATAACCCTAACGCCGAGTCGACCCGAACCACATGCTCATGTT TCAGTGTGTGGGAAGGAGCTTCATCCTCTCAATCAATTGCAACTCTCGGG CTTCCGTCTCCATCCGGGTCCACTGCCGGAGCAATATCGGGGCCTGGCCC ACGTCCAATCCCGCAAGAAGCACAAGCATAAAAAGCACAAGCACAGTCGC AACGGGGCCATGGCTGGGGACACGCCCGCCGGAGGCGAGGAGAGTAAGGG CGACGAGGAGCGGGAGAAGAAGCGAGAGAAGAAGCACAAACGGCACGAGA AGGATGCCGAGGAGAGAAAGAAAAAGAAGAAGGAGAAAAAAAAGAAGCGA AGCAAGGAAGAGAAGGACAGTTGA
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Synonyms
The feature 'mediator of rna polymerase ii transcription subunit 19' has the following synonyms
Synonym
Tk10780
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