hypothetical protein BRAFLDRAFT_120626, maker-scaffold143_size313727-snap-gene-1.28 (gene) Tigriopus kingsejongensis

Overview
Namehypothetical protein BRAFLDRAFT_120626
Unique Namemaker-scaffold143_size313727-snap-gene-1.28
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of hypothetical protein BRAFLDRAFT_120626 vs. L. salmonis genes
Match: EMLSAG00000001605 (supercontig:LSalAtl2s:LSalAtl2s127:501702:502235:-1 gene:EMLSAG00000001605 transcript:EMLSAT00000001605 description:"maker-LSalAtl2s127-augustus-gene-4.19")

HSP 1 Score: 51.2174 bits (121), Expect = 2.035e-8
Identity = 34/90 (37.78%), Postives = 44/90 (48.89%), Query Frame = 0 
Query:   46 VCRRLFEVPPDHEQQNIEFAREELARKQRASSLRWNFDFENGRPLDGQLEWTRQVAASPYRRPPASVRMPASSTLEAESLVEHTVAAASR 135
            V R LF  P DHE+ N+ F + ELAR +  +S RWN+DF    PL G+ EW                 +P+ +TL  E LV HT     R
Sbjct:   21 VKRALFG-PVDHEE-NVRFVQRELARNREEASQRWNYDFSRDVPLPGRYEW----------------EVPSLNTL-VEPLVSHTCDKDQR 91
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BLAST of hypothetical protein BRAFLDRAFT_120626 vs. SwissProt
Match: gi|1168873|sp|P46529.1|CDN1B_NEOVI (RecName: Full=Cyclin-dependent kinase inhibitor 1B; AltName: Full=Cyclin-dependent kinase inhibitor p27; AltName: Full=p27Kip1)

HSP 1 Score: 54.299 bits (129), Expect = 7.301e-8
Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 0 
Query:   22 SNSSSSTEDQDPRPPIRPLPVTSSVCRRLFEVPPDHEQ--QNIEFAREELARKQRASSLRWNFDFENGRPLDGQLEWTRQVAASP---YRRPP----ASVRMPA 116
            SN S S E  D R    P P   S CR LF  P +HE+  +++E  R ++   + AS  +WNFDF+N +PL+G+ EW      S    Y RPP     + ++PA
Sbjct:    7 SNGSPSLERMDARQAEYPKP---SACRNLF-GPVNHEELTRDLEKHRRDM---EEASQRKWNFDFQNHKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPA 103
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BLAST of hypothetical protein BRAFLDRAFT_120626 vs. SwissProt
Match: gi|1168871|sp|P46527.1|CDN1B_HUMAN (RecName: Full=Cyclin-dependent kinase inhibitor 1B; AltName: Full=Cyclin-dependent kinase inhibitor p27; AltName: Full=p27Kip1)

HSP 1 Score: 53.5286 bits (127), Expect = 1.776e-7
Identity = 51/169 (30.18%), Postives = 71/169 (42.01%), Query Frame = 0 
Query:   22 SNSSSSTEDQDPRPPIRPLPVTSSVCRRLFEVPPDHEQQNIEFAREELARKQRASSLRWNFDFENGRPLDGQLEWTRQVAASP---YRRPP----ASVRMPASSTLEAESLVEHTVAAASRPLKSRENSPVELHQPLVKEPLSTSAAKHIQSASDDCDSSRVGASENIA 183
            SN S S E  D R    P P   S CR LF  P DHE+   +  +      + AS  +WNFDF+N +PL+G+ EW      S    Y RPP     + ++PA  + +          + SRP             PL+  P + S   H+     D   S+ G +E  A
Sbjct:    7 SNGSPSLERMDARQAEHPKP---SACRNLF-GPVDHEELTRDLEKH-CRDMEEASQRKWNFDFQNHKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQD---------VSGSRPAA-----------PLIGAP-ANSEDTHLVDPKTDPSDSQTGLAEQCA 149
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BLAST of hypothetical protein BRAFLDRAFT_120626 vs. nr
Match: gi|260810466|ref|XP_002599985.1| (hypothetical protein BRAFLDRAFT_120626 [Branchiostoma floridae] >gi|229285269|gb|EEN55997.1| hypothetical protein BRAFLDRAFT_120626 [Branchiostoma floridae])

HSP 1 Score: 61.6178 bits (148), Expect = 1.526e-7
Identity = 69/203 (33.99%), Postives = 103/203 (50.74%), Query Frame = 0 
Query:   36 PIRPLPV-TSSVCRRLFEVPPDHEQQNIEFAREELARKQRASSLRWNFDFENGRPLDGQLEWTRQVAASP---YRRPPASVRMPASSTLEAESLVEHTVAAASRPLKSRENSPVELHQPLVKEPLSTSAA--KHIQSASDDC--DSSRVGASENIATSAQPSPRSAAVTASKSGGHISKSVQRQTSITDHFAHQKRSRSNVKT 230
            P RP  +  SS CRRLF  P DHE+   +  R +LA+ +  S  +WNFDF++  PL+G+ EW R V+  P     R   SV   A+++   E L     A  +R   + E+SP  + +  V+     SA   +H +S  D    D S   +S   A S +P P ++  T   S   +S+ V+RQT +TD + HQKR    V++
Sbjct:   18 PARPAGMPRSSACRRLFG-PVDHEELERDL-RSQLAKIEEDSQRKWNFDFKSDCPLEGRYEWER-VSGVPSFYIGRVNISVSPAAAASHAPEQL-----ACTAR--STTEDSPGLVGETAVRTVAKNSACTEEHRESRVDARVEDLSAEISSTVSAGSERPGPGASGNTPG-STPTMSRGVKRQTRLTD-YTHQKRRDGQVES 208
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BLAST of hypothetical protein BRAFLDRAFT_120626 vs. nr
Match: gi|350538253|ref|NP_001232325.1| (cyclin-dependent kinase inhibitor 1B [Taeniopygia guttata] >gi|197127280|gb|ACH43778.1| putative cyclin-dependent kinase inhibitor 1B [Taeniopygia guttata] >gi|197127281|gb|ACH43779.1| putative cyclin-dependent kinase inhibitor 1B [Taeniopygia guttata] >gi|197127282|gb|ACH43780.1| putative cyclin-dependent kinase inhibitor 1B [Taeniopygia guttata] >gi|197127283|gb|ACH43781.1| putative cyclin-dependent kinase inhibitor 1B [Taeniopygia guttata])

HSP 1 Score: 58.9214 bits (141), Expect = 7.614e-7
Identity = 38/91 (41.76%), Postives = 51/91 (56.04%), Query Frame = 0 
Query:   22 SNSSSSTEDQDPRPPIRPLPVTSSVCRRLFEVPPDHEQQNIEFAREELARKQRASSLRWNFDFENGRPLDGQLEW-TRQVAASP--YRRPP 109
            SN S + E  + R    P P   S CR LF  P +HE+ N EF ++ L   + A   +WNFDF+N RPL+G+ EW   +  +SP  Y RPP
Sbjct:    7 SNGSPTLERMEARQSEYPKP---SACRNLF-GPVNHEELNREF-KKHLQEMEEAYQRKWNFDFQNHRPLEGRYEWQAVEKGSSPDFYFRPP 92
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BLAST of hypothetical protein BRAFLDRAFT_120626 vs. nr
Match: gi|701417258|ref|XP_009972607.1| (PREDICTED: cyclin-dependent kinase inhibitor 1-like [Tyto alba])

HSP 1 Score: 57.7658 bits (138), Expect = 8.241e-7
Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0 
Query:   40 LPVTSSVCRRLFEVPPDHEQQNIEFAREELARKQ-RASSLRWNFDFENGRPLDGQLEWTRQVAASPYRRPPASVR--MPASSTLEAESLVEHTVAAASR 135
            +P +S VCR LF  P DH+Q   +F  E+L R+Q   +  RWNF+FE   PL+GQ +W R   A    +PP  +   + A+S+    SLV H V +  R
Sbjct:   11 MPCSSKVCRNLFG-PVDHQQLQNDF--EDLLRQQLEEAQQRWNFNFETETPLEGQFKWERVFLAE---QPPQEIHSLVKATSSENRSSLV-HKVPSKDR 102
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BLAST of hypothetical protein BRAFLDRAFT_120626 vs. nr
Match: gi|1126208786|ref|XP_019638073.1| (PREDICTED: cyclin-dependent kinase inhibitor 1-like [Branchiostoma belcheri])

HSP 1 Score: 59.3066 bits (142), Expect = 9.781e-7
Identity = 63/225 (28.00%), Postives = 99/225 (44.00%), Query Frame = 0 
Query:   36 PIRPLPV-TSSVCRRLFEVPPDHEQQNIEFAREELARKQRASSLRWNFDFENGRPLDGQLEWTRQVAASPYRRPPASVRMPASSTLEAESLVEHTVAAASR------PLKSRE--NSPVELHQPLVKEPLSTSAAKHIQSASDDCDSSRVGASENIATSAQPSPRSAAVTASKSGGHISKSVQRQTSITDHFAHQKRSRSN----VKTQERKFHSSENLLEESHP 247
            P RP+ +  SS CRRLF  P DHE+   +  R ++A     S  ++NFDFE  RPLDG+ EW R   A  +     ++ + A+ T             A+R      P   RE     V  +   V E   +     ++    +  S+    SE   ++A  +   +  T       +S+ V+RQT +TD  + +KR++      V ++E K HS    L  +HP
Sbjct:   18 PARPVGMPRSSACRRLFG-PVDHEELERDL-RSKIAAIHEESRQKYNFDFEAERPLDGRFEWERVSDAPSFYIGRVNISVSAAPTAAESHTPGQLACTAARSTTEGSPGTEREAATGTVATNSVCVGEHGESRVDARVEDLGAEISSTDSAGSETQGSAAPGNTPDSTPT-------MSRGVKRQTRLTDFHSQRKRAKRRQQQAVASKENKQHSRSETL-PAHP 232
The following BLAST results are available for this feature:
BLAST of hypothetical protein BRAFLDRAFT_120626 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000016052.035e-837.78supercontig:LSalAtl2s:LSalAtl2s127:501702:502235:-... [more]
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BLAST of hypothetical protein BRAFLDRAFT_120626 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
gi|1168873|sp|P46529.1|CDN1B_NEOVI7.301e-837.50RecName: Full=Cyclin-dependent kinase inhibitor 1B... [more]
gi|1168871|sp|P46527.1|CDN1B_HUMAN1.776e-730.18RecName: Full=Cyclin-dependent kinase inhibitor 1B... [more]
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BLAST of hypothetical protein BRAFLDRAFT_120626 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 4
Match NameE-valueIdentityDescription
gi|260810466|ref|XP_002599985.1|1.526e-733.99hypothetical protein BRAFLDRAFT_120626 [Branchiost... [more]
gi|350538253|ref|NP_001232325.1|7.614e-741.76cyclin-dependent kinase inhibitor 1B [Taeniopygia ... [more]
gi|701417258|ref|XP_009972607.1|8.241e-739.39PREDICTED: cyclin-dependent kinase inhibitor 1-lik... [more]
gi|1126208786|ref|XP_019638073.1|9.781e-728.00PREDICTED: cyclin-dependent kinase inhibitor 1-lik... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold143_size313727supercontigscaffold143_size313727:147579..150835 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:regulation of catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold143_size313727-snap-gene-1.28-mRNA-1maker-scaffold143_size313727-snap-gene-1.28-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold143_size313727:147579..150835-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold143_size313727-snap-gene-1.28 ID=maker-scaffold143_size313727-snap-gene-1.28|Name=hypothetical protein BRAFLDRAFT_120626|organism=Tigriopus kingsejongensis|type=gene|length=3257bp|location=Sequence derived from alignment at scaffold143_size313727:147579..150835- (Tigriopus kingsejongensis)
GGAGAACTGCTCTGAGCAGTACCTCAGACTAGCTGGCTTGACTGGCTTGG
GTTTAGATGGCCTGGATTGGGAGTGTGAGGTTGAGTTGTCTCGCTAAAGG
CCGAAAAGTGTGGCCAAGGCTGGACCAAGTGAGCTCAGCTAGTGTAACAA
CAGGCCACTAAATATCACCCGAACCAGTTTTTACCGGCCTTTGTGCATAA
AAGGCCATATTCTCGTGTTTGTAGCCAGGTACGCACACACATTTCCTACT
GATTTGGTTTCTGGGCGCGGTTGGCAAGTCTTGAAATCCTCACCTGGTGC
TGTCTTCACTATTTATCATTGATATTAATGACAAACAACTGGGATGTTCA
TGCTTGCAGTTTGAGCGGCTAGCAATACAATTCAGAACCTATGCCATTGG
GTGTGCATCCGTGATGATCTGGGAGCGAGGTGAACAATTATTGCACCTCG
TCGGGCTAATGAAAATTGTGATTGTTTATTGACTCTATAGCACATGAGTT
GTTCATAGAAGAGTGTATGTGAACTATCATGGAGAAAACAAGTGTGTCTG
GTCCAACCATGTAGCAGGGGATCGCTTTGCTATGGGTTCCGGGATGCTTG
AACGTATGGATCTGAAAATCTGAAATTGTAACTTTGGCCTCCAAGATTGG
TGCATGGACTCAATCGGATTGACTGAATCGTTAATTTAATGCTAATTAGC
GTTTGGGCAACTGGTAGCTTGTAACCACCTCGTTCATATTTGAGAGCTCT
ATATCGGAAATCTATCATATTATGGTCCCGAACATCTTAAGCCTCGAGGG
AGTCTTAGTGACAAAGAGAGCAAACATCTACCAAATTTTGCGGTTTGATT
CACACACTGTACACTCATGAGCGAGTCCTTATCAAAATGCTTCAAAGAAA
TCCAAAATGCTAAGATGTCTGTAAATGCACCTGGCTCTCATCTCACGCTC
GGCCTTCTCGGCTAGTTTTCTCCCAAGGGTTCTTCTCGCAAATGCTCCCC
TTAACTTGATGTATAAACTATGCATTTTTCAATACAAACGTAGGTCAATC
CATAATTGGGACGTAGCAAGTCCCTCCTAGCAGCTTGACTTGAATTTGGC
TGGATTACATTGTTTGTGATGCAAATGGGGATGAATACGATTGCCAAGGG
CTGTGGGGGAATCACGTCACGGCAAGATCTTGGTATGAAATTTGGGCAGG
GAATTGGATTTTGTGAAAAAGGTCTCGATTCACCATGGTTCGCCATGAGT
TGAGTTTGAGTTGAGTTGAGAGATGAGTTTGTTTATAGATGACAAACATT
TGATTACCTTGATTACAATGGAGGTGTGCTGCCTTATCAACCTGCTCATG
ATCACTCTCCATTTAATTTTTCCAGATATGCCAGCTCAGTCATCGTCGAG
CTTCCATCCAAGTTGGGTTTAATCAAGAACAACTCGCTCTCCACAATCAT
TAACCATGAGCTCGATTTTGAAGGAGAAGATAAGCCGCTTTCAATCCCAG
CGCCGCTCTGGGGCTCGATCTAATAGCTCTTCCAGCACCGAGGATCAAGA
TCCGCGACCTCCCATCCGACCTCTGCCCGTGACATCCTCCGTTTGTCGGC
GATTATTTGAAGTACCTCCAGACCATGAGCAGCAGAACATAGAGTTTGCC
CGTGAGGAGTTGGCCCGCAAACAACGGGCGTCGTCTTTACGCTGGAACTT
CGACTTCGAAAACGGCCGACCTTTGGATGGCCAGCTAGAATGGACCCGCC
AAGTAGCCGCATCGCCTTATCGAAGGCCGCCCGCATCTGTCAGAATGCCC
GCATCCAGCACGTTGGAAGCTGAATCACTGGTGGAACACACGGTTGCAGC
AGCCTCCAGACCGCTGAAGAGTCGCGAGAATTCTCCTGTGGAGCTCCACC
AACCTCTGGTGAAAGAACCTTTGAGCACCTCTGCGGCCAAACACATTCAG
AGCGCGTCAGATGACTGTGATAGTTCAAGAGTTGGTGCCAGTGAGAACAT
TGCAACGTCTGCCCAACCTTCACCCCGATCTGCTGCTGTCACAGCCTCCA
AATCCGGAGGCCACATTTCGAAATCCGTCCAGAGACAGACCTCGATTACA
GGTAACCACTCAGTCCTAGCCCTCTTTATCTTCTCAATATTGTCTCGTCC
TGACATGACCACCTTCCTGAAATTGGATAAGATCCTTTGCCATTCTTGTC
CTGAGAAAGGAGACGCGTTTTGCACCATAACACTTTGGTCTAAGTACTCT
GTGATGGGTGAAATTTGATGGGGAAAATATGCAAGATTATAATTTTCCAA
TACTTGATTCAAAAACTCTTTGCTTTCAGATCATTTCGCTCATCAAAAGC
GATCAAGGTCGAATGTTAAGACTCAGGAGCGGAAGTTTCATTCGTCAGAG
AACCTTTTAGAGGAATCCCACCCTGCTGCTGAGGAGAAATTATCTCTGCC
TAAAGGCCACCAATCCGAGGATTTGACCCCGCCTTCAAGTGCGGATTAGC
TATGACTTTAGTGATTGAGACTCGTCCATAGTCGGCAGTGGGAATCGGCC
CAATCCATTGGTTTTTCCACAATCATGAGCGACTATGCCAGCTGTGATTT
TTATAGTTGTTGTTTGCCTGAATTTACTGTAATCATTTTTTGATAAAAAC
TGATATTCATCCATTTCAAAGTTTCATTTGATCTCCTTCCTTCGGAATAA
CTAACAACAGCCACCTTATACCGCTCGATTACAACAACAGCTTTAAACTT
TATCCCCCACAAAGCTCCTGCCTTTCGACTCGCCCTGGGTGATTTTCGGA
CATGTCTCTATGATTATTTGATGTCAAACCTGTGTAGACAATCTGTCAGT
TTATTTTGCAATCTCCATCATGAATGGTGTTCCCCAATTTGCAAGATTTG
GGTTCGCAGCGAAACCGGAAATCATTCATAATCGGGATTCAAGGACTCCC
CCTTGGTGGAGGTTTTTCTGAAGTCTTTCTGTTGTTTCGTCATGTTGCAT
CGGTCGTTCAATGACCACCGTTGCTTGGTTACATGGTATATAATTAAATA
TATATATATTCTCGATGTCGCTTGGAATTTCCAAATTATTTGACTCTGCG
AATCGGGGATTCTGAATGAATTTCGTGGGGGGGAATTGATATTCATACAA
TGTGATGATTGGACATGCTCGCAAAAGCGATGGACCAGTGACCAGTACCC
ATCTCCGTGGGTTGGATCTTTGTGCTTCATGGCACTTTGTCCAGTTTGAC
TAACAGG
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Synonyms
The feature 'hypothetical protein BRAFLDRAFT_120626' has the following synonyms
Synonym
Tk09412
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