microtubule-actin cross-linking factor 1 isoform x6, maker-scaffold148_size310697-snap-gene-2.14 (gene) Tigriopus kingsejongensis

Overview
Namemicrotubule-actin cross-linking factor 1 isoform x6
Unique Namemaker-scaffold148_size310697-snap-gene-2.14
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of microtubule-actin cross-linking factor 1 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000005204 (supercontig:LSalAtl2s:LSalAtl2s274:335483:419694:1 gene:EMLSAG00000005204 transcript:EMLSAT00000005204 description:"maker-LSalAtl2s274-snap-gene-3.27")

HSP 1 Score: 53.5286 bits (127), Expect = 1.148e-8
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0 
Query:  128 EDLEDDVDSIRSPFYKPRTPLRYPLSPQSPPSDESSYQGSIPGSAPSDRS 177
            +DL DD+DSIRSPFYK R PL YP+SP +   DESS+   + G    D S
Sbjct: 1094 QDLSDDLDSIRSPFYKQRIPLTYPISP-NHSEDESSFHEEVGGGTSHDDS 1142
The following BLAST results are available for this feature:
BLAST of microtubule-actin cross-linking factor 1 isoform x6 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000052041.148e-854.00supercontig:LSalAtl2s:LSalAtl2s274:335483:419694:1... [more]
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BLAST of microtubule-actin cross-linking factor 1 isoform x6 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of microtubule-actin cross-linking factor 1 isoform x6 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold148_size310697supercontigscaffold148_size310697:235295..237866 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold148_size310697-snap-gene-2.14-mRNA-1maker-scaffold148_size310697-snap-gene-2.14-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold148_size310697:235295..237866-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold148_size310697-snap-gene-2.14 ID=maker-scaffold148_size310697-snap-gene-2.14|Name=microtubule-actin cross-linking factor 1 isoform x6|organism=Tigriopus kingsejongensis|type=gene|length=2572bp|location=Sequence derived from alignment at scaffold148_size310697:235295..237866- (Tigriopus kingsejongensis)
GGCCTCGACGGGTGCGGCAACCGCATCTCGCCACCGCGAACCCCAAGGGG
CTACGGCCAAGCCTCTGGAGCTGCCCCTGGCGAGCTCTTTGATCCCAACG
GGGGAGTGGACACCATTTCCCCTGGGGATGGAGGCATCACCCCGGGCTCC
ACCTTCGATGCTTCCGAAGTAGACAGGTGTGTACGGAGAGGATCCTCGGG
ACCTCCGTCTAGCAATCTGGCAGGCGGAGGCCACTCGTCCTCCACTGCCG
GCCCCAGTCCCATTGGCAGTGGGCAGTTGATGCAATTATTTTCCCGCACC
CACGAGGAGAGCCGAAGGTTGGTCTGGATGACCAGAAACAGTCATGTTTG
TCCGGGCACCTTTTCTTTAAATGCACCAAGAGCACCACAATCAGATCTTT
ACCACAACTACCTAGTCTTCGCACTGGCATTTTGGTCAAGAGAGCTGCTC
TGTCAGGGGTTACAAGATTGGCGAGGTCCTGGTAATCCATAATCATTCTC
GCCAGGTTAGAAGCACCCGAATTCGTACTTACTGGATTACCAGTAGTTTC
TGGAATTGAATTCGCGAGCCCTGACATCGATCCAACGACACTCGTGTAAC
AGAAGAACCCATGTCTAACTCTGCTATAGCATTAAGAGTTATTGAACAAT
AGTAACGGGAGGCATTAACGTGTCTACAGTATGTCTACGAAGTTTAGTTG
AAAAAAATGAAACAGCGTTGGATCAAGGGTGTTATTTTTATGCGTCCCTT
CACTATCAGCCATGCACTCTAAACTGAGAATCTGTAGAAATTGCGTATTT
TTTGGATGGATAATTGTGAAGCGATTTTCGGCACCACTTGCCTGGGGACT
CGTCAGGGGATTGCTTGGCATCCCGAACTTTCTAAAATGAGCCTTTTTTC
ACCTCAGACAGGCAACTTACGGGTACTAAAACATACATTTGAAAGTGTTG
ACCAAAATGCCAGGGAGGTATCTCTAAATTACTCACCATCACTCCAACTA
CACTAATTTTGAGCACCAGGGCACTTGCACCATTTTTTGATGTCGACTAC
TTGTACGCCTTAATGCACGCAAAATTCAGTTTGTCCCAAACACATTGCGC
CAGGTATGCCATCGGCATTGGGACTCACTGCGGATGACGCCAAGACAATT
GCCGAGCACGTAGGATAACTTGCATGACTCGTAGCTGCACTCTCCAACTT
TCAGTGATCTAAATTGGATTGGTGACTTCGACATGGGAGCCACGCCCCAA
TCTGATCGCCGAATTCCGTTTTTCAGCGAGGATTACCTCCGGGCCCAGCT
GATGCGTTCCACCTCTGATGAGGCCATTAACTCCAAGAGTGAGGACCTTG
AGGACGACGTGGATTCGATTCGATCTCCCTTCTACAAGCCCCGTACGCCC
CTCCGCTACCCGTTATCGCCCCAAAGCCCGCCCAGTGATGAGTCTTCTTA
TCAAGGGTCCATTCCCGGCTCAGCACCCTCGGACCGATCCTACAATGGAG
GTGGCAACCTCTACACTTCGGGTTTGAGCCACGATTCCCGGGATTCCATT
GAGTCCTCGAGCATTCAAAACGCCCTTCTTGGGCCCGGATTCTATGTCCC
CGACTTCAAGCACTAGAATTTGCTTCAATGTCACGCGGCCAGGCTGGAAG
CCGAGTTTAACCAACCTGACAGCCAAGTCAGCCAGCCTGAATCAAGAAGG
GCAGCCTGAAGAGTCGAAGTTTGGCGGCCATCTTGGGCAGGGCGACTCGA
TGGAAAAAATAACAAAATGGCTCTCTCAAAATGGCGCCTTGAGTGCACCG
TACCCTGAGAGATGGTTCTGCTTGATCGTCGAAAACCTCTAGTGAAAAGA
CACTGTGGCAATCCTGGGAGTGCTGAAAGTGACACAATTGCTCATAGAAT
AAGTCATCAAATTAATGTGTTCAAAATGTATACACTTCGTATTGCATGCC
GACTGATAATATTTTTGAGTGCTCTGTATTGTGTATGAACCAGGAGTACA
TGAGTTGGGGGTGGAATATCCTTGAATATTCCGATTTCCCTTTTGCATGA
GAACAACCACAAACCGATTTAGCGTCAGCGCTTCAGTTAGTGATGTCAAG
AATGGACAATCAAGGCCAGTTGTCTGGCCAAGACAGATCCATGGCTTGGC
GGTGTTTGGCCAAAACACAGTTGTCTGTGACACAGTTGATTTTTTGTCCA
CTTTGGAGCTGCTGACTTGAACACAAAATCAATTTTCTCCTTTTTATACT
CGAATGAATTGTACATAGGAATTCTTTACATCGCCATAGGACTCTTAAAC
GTCAATCAACCCATTGAATCTCCCCGGAAATCAGTCCCAAGCTAAAATAT
AGCCTCTTCCTTTCCCATTATGAATGCACATCAAAGTCTTAGACTTGAAC
CCAATTACTTTCTTCTTTCCCCGGAACTCTATGCTGAGTTAATGATTCCA
TTGCACAAGTTGATTATTACTGGTAAGATACTAAATAATGATGTGAACTT
AGCAAATGACGAAATCATCCCAAGACTTGTCGCTATACCAAAATCTCCAC
CAGCTCTTTGTACGTACATGAA
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Synonyms
The feature 'microtubule-actin cross-linking factor 1 isoform x6' has the following synonyms
Synonym
Tk10308
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