GJ24375, maker-scaffold155_size301336-snap-gene-2.10 (gene) Tigriopus kingsejongensis

Overview
NameGJ24375
Unique Namemaker-scaffold155_size301336-snap-gene-2.10
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of GJ24375 vs. L. salmonis genes
Match: EMLSAG00000001968 (supercontig:LSalAtl2s:LSalAtl2s134:815670:816916:1 gene:EMLSAG00000001968 transcript:EMLSAT00000001968 description:"maker-LSalAtl2s134-snap-gene-7.39")

HSP 1 Score: 48.521 bits (114), Expect = 2.159e-8
Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 0 
Query:   17 TETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPT-KKLGSSH-EPTNLDIKKIKRMYGCD 79
            T T+G+PYD+KS+MHYT  A++K+  +PT+  K    PT  ++G S    T+LD +K+ R Y C 
Sbjct:  189 TLTFGLPYDYKSVMHYTAFAYSKN-GEPTMTPK---FPTSNRIGGSFIGLTSLDFQKLNRFYQCS 249
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BLAST of GJ24375 vs. L. salmonis genes
Match: EMLSAG00000009443 (supercontig:LSalAtl2s:LSalAtl2s605:86139:87526:1 gene:EMLSAG00000009443 transcript:EMLSAT00000009443 description:"maker-LSalAtl2s605-augustus-gene-1.13")

HSP 1 Score: 48.521 bits (114), Expect = 2.370e-8
Identity = 30/78 (38.46%), Postives = 41/78 (52.56%), Query Frame = 0 
Query:   17 TETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEPTNLDIKKIKRMYGCDVHEDKDYSDFDTSAY 94
            T TYG PYD+KSIMHY   +  K+ +KPTI  ++    T  +G     + LD KK+ R Y C     K   +  +S Y
Sbjct:  207 TVTYGFPYDYKSIMHYRPYSLTKN-NKPTITKRNGG--TTGIGRGSRLSLLDFKKLNRAYRCPAKTAKPCKNRRSSFY 281
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BLAST of GJ24375 vs. L. salmonis genes
Match: EMLSAG00000000529 (supercontig:LSalAtl2s:LSalAtl2s1082:34274:35257:-1 gene:EMLSAG00000000529 transcript:EMLSAT00000000529 description:"maker-LSalAtl2s1082-augustus-gene-0.6")

HSP 1 Score: 46.595 bits (109), Expect = 7.927e-8
Identity = 22/61 (36.07%), Postives = 37/61 (60.66%), Query Frame = 0 
Query:   19 TYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEPTNLDIKKIKRMYGCD 79
            T+G+PYD+KS+M Y+ +AF+K+       ++    P   LG+    T+LDI+K+   Y C+
Sbjct:  152 TFGLPYDYKSVMQYSRKAFSKNGRNTMTPTRAFRGP---LGNRVGMTSLDIQKLNEAYQCN 209
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BLAST of GJ24375 vs. SwissProt
Match: gi|41019493|sp|P55113.2|NAS7_CAEEL (RecName: Full=Zinc metalloproteinase nas-7; AltName: Full=Nematode astacin 7; Flags: Precursor)

HSP 1 Score: 51.9878 bits (123), Expect = 5.191e-8
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0 
Query:    8 QFAFKQQINTETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEPTNLDIKKIKRMYGCDVHE 82
            QF       T  YG PYD+KSI+HY   AF+K+   PT++ K   + +  +G++ + +++DI KI RMY C V +
Sbjct:  206 QFGKVDLSKTSYYGQPYDYKSILHYDSLAFSKN-GFPTMLPK---VKSATIGNARDFSDVDISKINRMYNCPVEK 276
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BLAST of GJ24375 vs. nr
Match: gi|1061481637|gb|ODM98970.1| (Zinc metalloproteinase nas-6 [Orchesella cincta])

HSP 1 Score: 71.2478 bits (173), Expect = 1.248e-12
Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 0 
Query:   11 FKQQINTETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEP---TNLDIKKIKRMYGCDVHEDKDY 86
            F++  N   +G  YD++S+MHY++ AFA+DRS+PTI S+  +I  + LG+       T +D  +I RMY CD + D  Y
Sbjct:  186 FQKHSNLVNFGTVYDYRSVMHYSYNAFARDRSRPTITSRRRNIALRLLGAGDNAGGLTEIDALQINRMYKCDPYRDYSY 264
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BLAST of GJ24375 vs. nr
Match: gi|1101382037|dbj|GAV00591.1| (hypothetical protein RvY_11417 [Ramazzottius varieornatus])

HSP 1 Score: 68.5514 bits (166), Expect = 2.217e-11
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 0 
Query:   17 TETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEPTNLDIKKIKRMYGCDV 80
            T+   +PYD+ SIMHY W AFA D +KPTIV K+   P  KLG+    + LD++KI R+Y C V
Sbjct:  198 TDNLNMPYDYASIMHYAWNAFAVDHTKPTIVPKN---PKTKLGNREVVSALDVEKINRLYDCHV 258
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BLAST of GJ24375 vs. nr
Match: gi|780717182|ref|XP_011706011.1| (PREDICTED: zinc metalloproteinase nas-4-like [Wasmannia auropunctata])

HSP 1 Score: 65.0846 bits (157), Expect = 1.533e-10
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 0 
Query:   19 TYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEPTNLDIKKIKRMYGC 78
             YGVPYD+ S+MHY+  AFAKD+SKPTIV+   +   +++G     +  DI KIKRMYGC
Sbjct:  165 AYGVPYDYGSVMHYSAYAFAKDKSKPTIVTTDKN-AQEQIGQRKGYSRSDIIKIKRMYGC 223
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BLAST of GJ24375 vs. nr
Match: gi|780716561|ref|XP_011705858.1| (PREDICTED: zinc metalloproteinase nas-4-like [Wasmannia auropunctata])

HSP 1 Score: 62.003 bits (149), Expect = 2.077e-10
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:    6 ELQFAFKQQI--NTETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEPTNLDIKKIKRMYGC 78
            + Q+AF ++    T  YG PYD+ S+MHYT  AFA D +K TIV K   +   ++G+    ++ DIKKI+RMY C
Sbjct:   29 DYQYAFAKEPFGTTAAYGEPYDYYSVMHYTLYAFAIDTTKKTIVPKKQ-VDENRIGNRENLSDSDIKKIQRMYKC 102
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BLAST of GJ24375 vs. nr
Match: gi|1101382036|dbj|GAV00590.1| (hypothetical protein RvY_11416 [Ramazzottius varieornatus])

HSP 1 Score: 65.0846 bits (157), Expect = 3.509e-10
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:   15 INTETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEPTNLDIKKIKRMYGC 78
            + T+   +PYD+ SIMHY W AFA D +KPTIV K +  P  +LG+    + LD+ KI R+Y C
Sbjct:  195 VRTDNLDMPYDYGSIMHYEWNAFAIDETKPTIVPK-NPWPNARLGNRDVVSALDVLKINRLYNC 257
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BLAST of GJ24375 vs. nr
Match: gi|195391320|ref|XP_002054308.1| (uncharacterized protein Dvir_GJ24375 [Drosophila virilis] >gi|194152394|gb|EDW67828.1| uncharacterized protein Dvir_GJ24375 [Drosophila virilis])

HSP 1 Score: 64.3142 bits (155), Expect = 6.379e-10
Identity = 32/72 (44.44%), Postives = 48/72 (66.67%), Query Frame = 0 
Query:   11 FKQQINTETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEPTNLDIKKIKRMYGCDVHE 82
            F++  NTE +GVPYD+ S+MHY+ RAF+ +  +PTIV+K       ++G     ++LDI+K+ RMYGC   E
Sbjct:  227 FRKVDNTEAFGVPYDYGSVMHYSKRAFSFN-GQPTIVAKQAD-GAYRMGQRLGFSDLDIEKLHRMYGCGAQE 296
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BLAST of GJ24375 vs. nr
Match: gi|1101391770|dbj|GAU94179.1| (hypothetical protein RvY_06004 [Ramazzottius varieornatus])

HSP 1 Score: 64.3142 bits (155), Expect = 6.946e-10
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 0 
Query:   17 TETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEPTNLDIKKIKRMYGC 78
            T+  G+PYD++SIMHY W  FAKD++KPTI+ K  +     LGS    + LD++KI R+Y C
Sbjct:  238 TDNLGMPYDYESIMHYGWNYFAKDQTKPTILPKTKA----ALGSRAVVSRLDVEKINRLYEC 295
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BLAST of GJ24375 vs. nr
Match: gi|557761432|ref|XP_005180434.1| (PREDICTED: low choriolytic enzyme-like [Musca domestica])

HSP 1 Score: 63.929 bits (154), Expect = 8.389e-10
Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 0 
Query:   11 FKQQINTETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPTKKLGSSHEPTNLDIKKIKRMYGC---DVHEDKDYSDFDT-SAYG 95
            FK+   T  +GVPYD+ S+MHY+ RAF+++  +PTIV+KH     + +G  +  +NLDI+KI RMY C   D++ +   SD  T +AY 
Sbjct:  269 FKKVSPTIAFGVPYDYGSVMHYSPRAFSQN-GQPTIVAKHPD-GNQIMGQRNGFSNLDIEKINRMYNCYANDLNNEIQPSDIPTRTAYA 355
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BLAST of GJ24375 vs. nr
Match: gi|1062654425|ref|XP_017967674.1| (PREDICTED: zinc metalloproteinase nas-38 [Drosophila navojoa])

HSP 1 Score: 63.1586 bits (152), Expect = 1.039e-9
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0 
Query:    8 QFAFKQQINTETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPT-KKLGSSHEPTNLDIKKIKRMYGCDV 80
            QF       T TY VPYD +S+MHY   AFA D SKPTI +    +PT +++G +  PT  D+ KI++MY CD+
Sbjct:  179 QFMATSSSTTTTYDVPYDFESVMHYPKNAFATDPSKPTIRALVDGVPTEREMGQTVGPTEGDLFKIRKMYKCDL 252
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BLAST of GJ24375 vs. nr
Match: gi|1060145173|ref|XP_017872136.1| (PREDICTED: zinc metalloproteinase nas-7 [Drosophila arizonae])

HSP 1 Score: 62.3882 bits (150), Expect = 1.648e-9
Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:    8 QFAFKQQINTETYGVPYDHKSIMHYTWRAFAKDRSKPTIVSKHHSIPT-KKLGSSHEPTNLDIKKIKRMYGCD 79
            QF       T TY VPYD +S+MHY   AFA D SKPTI +    +PT +++G +  PT  D+ KI++MY CD
Sbjct:  178 QFMATSSSTTTTYDVPYDFESVMHYPKNAFATDPSKPTIRALVDGVPTEREMGQTVGPTEGDLFKIRKMYKCD 250
The following BLAST results are available for this feature:
BLAST of GJ24375 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAG000000019682.159e-843.08supercontig:LSalAtl2s:LSalAtl2s134:815670:816916:1... [more]
EMLSAG000000094432.370e-838.46supercontig:LSalAtl2s:LSalAtl2s605:86139:87526:1 g... [more]
EMLSAG000000005297.927e-836.07supercontig:LSalAtl2s:LSalAtl2s1082:34274:35257:-1... [more]
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BLAST of GJ24375 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
gi|41019493|sp|P55113.2|NAS7_CAEEL5.191e-838.67RecName: Full=Zinc metalloproteinase nas-7; AltNam... [more]
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BLAST of GJ24375 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1061481637|gb|ODM98970.1|1.248e-1240.51Zinc metalloproteinase nas-6 [Orchesella cincta][more]
gi|1101382037|dbj|GAV00591.1|2.217e-1150.00hypothetical protein RvY_11417 [Ramazzottius varie... [more]
gi|780717182|ref|XP_011706011.1|1.533e-1053.33PREDICTED: zinc metalloproteinase nas-4-like [Wasm... [more]
gi|780716561|ref|XP_011705858.1|2.077e-1044.00PREDICTED: zinc metalloproteinase nas-4-like [Wasm... [more]
gi|1101382036|dbj|GAV00590.1|3.509e-1046.88hypothetical protein RvY_11416 [Ramazzottius varie... [more]
gi|195391320|ref|XP_002054308.1|6.379e-1044.44uncharacterized protein Dvir_GJ24375 [Drosophila v... [more]
gi|1101391770|dbj|GAU94179.1|6.946e-1048.39hypothetical protein RvY_06004 [Ramazzottius varie... [more]
gi|557761432|ref|XP_005180434.1|8.389e-1042.70PREDICTED: low choriolytic enzyme-like [Musca dome... [more]
gi|1062654425|ref|XP_017967674.1|1.039e-945.95PREDICTED: zinc metalloproteinase nas-38 [Drosophi... [more]
gi|1060145173|ref|XP_017872136.1|1.648e-946.58PREDICTED: zinc metalloproteinase nas-7 [Drosophil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold155_size301336supercontigscaffold155_size301336:296514..299942 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold155_size301336-snap-gene-2.10-mRNA-1maker-scaffold155_size301336-snap-gene-2.10-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold155_size301336:296514..299942+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold155_size301336-snap-gene-2.10 ID=maker-scaffold155_size301336-snap-gene-2.10|Name=GJ24375|organism=Tigriopus kingsejongensis|type=gene|length=3429bp|location=Sequence derived from alignment at scaffold155_size301336:296514..299942+ (Tigriopus kingsejongensis)
ATGCATCCCATTTCAGAGCTCCAATTCGCTTTCAAACAGCAGATCAACAC
TGAAACCTACGGAGTCCCCTATGACCACAAGAGTATCATGCATTACACTT
GGAGGGCCTTTGCCAAGGATCGATCCAAACCCACCATCGTCTCAAAGGTG
AGTCGTCTTTGCGCAACCACATGCAATGGCACAACCCCAAACCTCTCAGG
GATCCGAAACGTTTGTTTGCGTTAGAGGCCTAGAAAAATTGTGCTCGATC
GTGGCCAACTCAGTTTCTAGATCTATGCATGAACCTAGAGTTCTGAATAC
TCGCAAGTAATGCAACTTTTTGATCAGGAGAGTTAAAAAGAAGGAAAATC
CAGAAACTGATACATTTTATACCAAAACCAGTTTGTGATGCTTTTTTAAC
ATAGACGTAATAAAGTCTAGAGAGGACGTAAGAAGTGGCGTACGGATGAG
ATCAGCAATCCAGGTTGGGTGAATTCACAATTAAGCAAGGATGCAATGAT
GACTCCCACAACTAGTTGAGTTAGCTGAGGGGATAGATATATACTAGGTG
GGCATATCCTTTGGAAGGATGCTAGCATATCTCTGGACAACTCTTTTTAT
AACTAACTTGTTTGAGCGCACCGGAAAAAGGAATTGTCAACTGAGTCTGC
TGATCTAGAACTGACAGCGGTGGGTCATATCCTGGCAAAGGTCAAATGTG
TTTGGGCAAGCAGGGCAAACTATCTTAGGTCCTGCCAAAGCATCTTCATT
TTGGTTCCCTAGATCAGCAGACTTGGTTGAGGTTCTCCCATTTAAGTACT
TGGACGGACACATTCACTCTTTAGGCCCTCTAGCTCCATCTATGAAAAGA
ACCTCTTTGATCAGCTCCATCGATGAAAAGAACCTCTTTGATCAGCTCCA
TCGATGAAAAGAACCTCTTTGATCAGCTCCATCAAGGAAAAGAACCTCTT
TGATCAGCTCCATCAAGGAAAAGAACCTCTTTGATCAGCTCCATCTATGA
AAAGAACCTCTCGGATCTGCTCCATCTAGGAAAAGAACCTCTTGGATCAA
CTCCAGCTAGGAAAAGAACCTCTTGGATCAGCGCCATATAGGAAAAGAAC
CTCTTGGATAAGCTCCATCTAGGAAAAGAACTTCTTTGATCAGCTCCATC
TAGGAAAATAACCTCTTTGATCAGCTCCATCTATGAAAAGAACCTCTTTG
ATCAGCTCCATCTAGGATAAGAACCTCTTTGATCAGCTCCATCTATGAAA
AGAACCTCTTGGATCAGCTCCATATAGGAAAAGAACCTCTTTGATCAGCT
CCATCAATGAAAAGAACCTCTTGGATCAGCTCCATATTGGAAAAGAACCT
CTTGGATCAGCTCCATCTAGAAAAAGAACTTCTTTGATCAGCTCCATATA
GGAAAATAATCTCTTTGATCAGCTCCGTCTAGGAAAAGAACCTCTTTGAT
CAGCTTCATCTAGGAAAAGAACCTCTTTGATCGGCCACATCTTCGAAAAG
AACCTCTTTAATCATGATTGGGTTAAGTGGATCCCTTACAGTGATCACTT
TCGTGGGTTGGTATATATAGTTTTGTAAACAATCATTGTCTGGTTAAGTT
GTGTTAACATTTGTTGTGTGTTGTTTAGTTCTGTAAACATTTATTGATTT
GTGTAGCCTTGTACACTTTTTTGTGTTTTCCATTATTCTGTTATTTTGTT
TTGTGTAGTTTGCAGCATAGTTGTTTTGCCATACAGTACTACTTATATTT
GTTAATTTTTATCAAAGGCCCTAACACTATTGACTAGCATTCGTTGGCAA
AGTGCTGACTCCCGGGCATAAACCTATTTTCATATTGAGGAAAGATACGA
TTACACGCATTACATTGAAGATATATACACCATCATCAGCTGAAGCTCAA
AGGGATTGATGACAGAGTGTGACTTGTCTCGTGACGTACATTTCCAGAGG
CGTTTTTAATAAAATTGAGTACATTGTTCATTTCAGCATCACAGCATTCC
TACCAAGAAGCTTGGTAGCTCGCATGAGCCCACCAACCTTGATATCAAGA
AGATCAAGCGAATGTACGGATGTGACGGTGGATATGATGGTTATAGTCAC
TCTGAACATCAAGGTGGAGGTTGGTGACATTTTTATTTACAGGGCGATAG
CCCCCAAAGACCAACAATGGATTGATGCAATTATTATTGGCTCCAGGTAT
ATTGATTAGATGAAAGCGCCTAAAAATTGGCTTGGGATGCTTCCATAACT
TTGTGAAGAGTTCGCTAAGCCTCCTGAACAAGATTGGTAGCTCTAACAAA
TCTGCTTTGTATTTTTCAGTGTTAACACTTCGGGTGGCACCAAAACGGTC
AAATTCCAGTTTTAATTTCTTCCAACCAAATGAGTGCTATTTTTTCTAAT
GTAGATCTAGTTGCTACAACCCTTTTCGACCTCTGTAAAGTGGAGTTCAG
TTGTTAAAACGAAAGTCAGAAGTTTCAACAGTTAACCAATGAAAGGCCTT
TTCACCTACAAATTACCTCTGGACACAATCTCGTTCCCCTTTGATTTCAG
GCTATGATTCAGGACTTGATTACTCCCAAGGTGTATGTAAGTACTATTCA
CGCAAAAATCAGTATAAACGATTATATAGCGGTCGATAGAAGGCGACTCG
AGCAAAATTGATAGTCCCATCTTTAGATATTAATTTAAAAGCAAAATCTG
CTGAAAGTCTCTTTGGACAAAAATCACAGTGAATATCTTTTTCGACCCAA
AAAAGGACTGCGTGGAGTTTTGGGATCAAACCAGACAAATTCCAGAAATG
CTTTTAAAAACATAGATCAGCTGATTTGTGAGAAAAAGTGTTGTCCTTGA
ATTTTTTGAAATGACTTCAGGTGGGAGACATTCCTTTATAACAACACTCG
TTTGGGTATTTTAACCATTATGGTACCAAATTTGTTCTGCCACAAGACGC
TCAAAATGATTTGTGCAGTCAAAAATACTCAGCTGTTCATGCATAATCAT
TTGAGTGAATGCATCATAGTCAGATCATCTTACTCACTTAACAATTAAAT
TGCAAAATTTTGCAAGCACGATTTATGCAAGCCAAGTAAACAAAATTGCG
GCAAGCACAGAAATTTGTGTCACACCCTCAATATTCAGCTCCATGAGACC
AGAATCAAACATATTTAAGGGTTCTTTATAATCAGCAACTGCAAGGATAT
TTACAAACCGTGACAGTTAAAAATTATCATGAATTTAAAAGATAAAAACA
AGTACTGGAAATAGGGCTAAAAACGAATGATTTTAAGATATGTGCATTAA
CCATCAAAAAACAATTGCAATTTATGGATGACCAACTTTAAGTAAGTTTA
TCATGGTTTGCATTTCCTTCTAGTCCACGAGGACAAGGACTACTCTGATT
TTGATACAAGTGCCTATGGAGGTGGTACT
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Synonyms
The feature 'GJ24375' has the following synonyms
Synonym
Tk03785
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