gaba-alpha subunit, maker-scaffold155_size301336-snap-gene-2.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of gaba-alpha subunit vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 241.891 bits (616), Expect = 1.159e-73 Identity = 114/255 (44.71%), Postives = 166/255 (65.10%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDG-LTSVQISGDVSLPQFKVLG----HRQKTIEARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYAS 318 + + D+T+ MY Q+W+D RLSF + + L + ++ IWVPDTFF N+K ++ H T +N+ +R+ G I +R T T +C MDL Y+P+D Q C +EIES+GYT+SD+ W + V+ D LPQF ++G R+ + Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARV+LG+TTVLTMTT+ ++LP+ISYVK+ID+YL CF VFA+LLEYA+ Sbjct: 118 ISEVSMDYTITMYLNQYWKDERLSFSTEED-KVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRQKPVVGVE---DAQLPQFTIVGWETNERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAA 368 HSP 2 Score: 68.5514 bits (166), Expect = 1.463e-12 Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFTL 78 + MY Q+W+D RLSF + L + ++ + IWVPDTFF N+K ++ HD T N+ +R+ GAI +R+ TL Sbjct: 127 ITMYLNQYWKDERLSFSTEED-KVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTL 203
BLAST of gaba-alpha subunit vs. L. salmonis genes
Match: EMLSAG00000006195 (supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-1 gene:EMLSAG00000006195 transcript:EMLSAT00000006195 description:"maker-LSalAtl2s339-augustus-gene-2.20") HSP 1 Score: 214.157 bits (544), Expect = 5.059e-63 Identity = 116/342 (33.92%), Postives = 191/342 (55.85%), Query Frame = 0 Query: 54 TTDNQFLRILHTGAILRSIRYDFTLDMYFRQFWQDPRLSFESRP-GLRKLVVGAE-----------------------YINL-----IWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQ-FKVLGHRQKTIEAR----NYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGLGDGGPP 361 T N F+R + ++ +++ + RQ W D RL F+ + + +V+ + Y+ + +W+ DTFF NEK FH +N ++R+ G++L SIR+++T +C M L FP+D+Q C +++ S+G+TM+D+ Y+W + VQ+ ++SLP FK+ G + + +YS L EI F R + +Y++ IYIP +IV++SW+SFW++ A PARVSLG+T +L M+T AS N++LP ++Y K+IDV+ G C VF++LLEYA V Y ++ R A QK A++++ E + + DGG P Sbjct: 76 VTVNIFVRSFSN---IDDVKMEYSFQITLRQQWNDGRLRFKDKLLSMEGIVIDFDFNIIPFYPDAASSGGLFQKDKIRYLTMTDSSKVWMXDTFFXNEKIGRFHNILQDNLYVRVFPNGDVLYSIRVSLTCACSMHLALFPLDKQTCNLDVASYGWTMNDLIYQWKET-NPVQMVANLSLPGGFKLDGFTNHNCDVKXATGSYSCLRVEITFARQLSFYVLTIYIPCFMIVLVSWMSFWIDHKAVPARVSLGITXLLAMSTTQASINSSLPPVAYTKAIDVWCGVCVTFVFSALLEYALVNYASRSDAQRA----AKQKEAKERELEQCAFSTERIEDGGFP 409
BLAST of gaba-alpha subunit vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11") HSP 1 Score: 209.92 bits (533), Expect = 2.400e-61 Identity = 148/495 (29.90%), Postives = 236/495 (47.68%), Query Frame = 0 Query: 76 FTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTI----EARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMA---KRIQMRKNRFLALQKMAEQKKNEAMN-QGGQGLGDGGPPDHNGIPKQTEIRINMHDMSRSGPGSS---SSVRFSNNKGGI--------LVNSPRQVSH-HHHPLNQHIPSGLSPISPLATYQGHVPMAVFNNPQMQQDYNEYL-LPPDHPRHPSNQ---------------HGNAAPTIAPNPKILRGLS---PKQIRELECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIY 531 +T D++F Q W+D RL ++ E++ IW PD+FF N K+ F T N ++ + IL ++LT+ SCPM + +P D Q C +EIES +T D+ + W D + + + LPQ +++ + ++ L +F R +GYYL Y+P+ LIVI+SW+SFW+ A PARV+LGVT++LT++T A++ +LP +SY+K+IDV++ C VF SL+EYA V + I+ +K+R ++ + + N N +GGQ + +P +T +D+SR S+ +S +N + L N RQ++H + N SG I P+ V N D +EY HPR S+Q H N + ++ + K+IR+L KK +L +D+ SR FP SFI NL+YW ++ Sbjct: 42 YTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLEKIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQTCNLEIESISHTTDDLIFTW-DKEMPLDVDKGIELPQLELISTKSDDCTTVYSTGQFTCLEVVFKFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSRGISNLILGTRGINVRSNLKGGQTA--------SMMPAETIATKFGNDVSRDKSFSTFLPNSNSIGDNGNSVPRGHTCVHLRNPSRQINHIDPYTGNPTGDSGYGDIPPVQNEPYFVSQESNGNGTDGGDISEYSNNSSSHPRINSHQPASPPPPPNGDIGGLHNNNVISQQGMKNLVHDVQLKRQKEIRDLMKKKREKAVL------VDRISRWLFPTSFILLNLVYWALF 521 HSP 2 Score: 51.6026 bits (122), Expect = 3.641e-7 Identity = 26/89 (29.21%), Postives = 44/89 (49.44%), Query Frame = 0 Query: 2 DMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFTLD--MYFRQFWQD 88 D++F Q W+D RL + E ++ E+++ IW PD+FF N K F T N ++ + IL ++ L M+F+ + D Sbjct: 45 DVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLEKIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHD 133
BLAST of gaba-alpha subunit vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5") HSP 1 Score: 200.29 bits (508), Expect = 9.941e-59 Identity = 101/247 (40.89%), Postives = 155/247 (62.75%), Query Frame = 0 Query: 63 LHTGAILRSIRYDFTLDMYFRQFWQDPRLSF--ESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQK----TIEARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLG 303 L T + + ++ ++++ + FR+ W D RL + ++ L+ L + +W+PDTFF NEK A H+ N ++RI GEIL SIR+++T +CPMDL+ +P+D+Q+C ++I S+G+ D+ Y W + VQ+ + LP+F + ++ T YS L E+ F R YYLI IY+P ++VI+SWVSFWL++ A PARVSLGVTT+LTM+T + NA LP +SY K+IDV+ G Sbjct: 48 LRTISRIDDVKMEYSVQVTFREQWNDERLRYYDDTHGHLKYLTLTDP--TKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYLWKEK-DPVQVVPGLHLPRFTLEQYKSAYCDVTTNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTG 291 HSP 2 Score: 54.6842 bits (130), Expect = 3.179e-8 Identity = 32/75 (42.67%), Postives = 42/75 (56.00%), Query Frame = 0 Query: 5 FRQFWRDPRLSF-DRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFTL 78 FR+ W D RL + D G K + + K +W+PDTFF NEK+A H+ N ++RI G IL SIR TL Sbjct: 67 FREQWNDERLRYYDDTHGHLKYLTLTDPTK-VWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTL 140
BLAST of gaba-alpha subunit vs. L. salmonis genes
Match: EMLSAG00000010137 (supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 gene:EMLSAG00000010137 transcript:EMLSAT00000010137 description:"snap_masked-LSalAtl2s66-processed-gene-1.3") HSP 1 Score: 196.052 bits (497), Expect = 5.669e-58 Identity = 117/324 (36.11%), Postives = 182/324 (56.17%), Query Frame = 0 Query: 75 DFTLDMYFRQFWQDPRLSFESRPGLRKLVVGA--EYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWN-DGLTSVQISGDVSLPQF---KVLGHR-QKTIEARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKM-------AEQKKNE--------AMNQGGQGLGDGGPPDHNGIPKQTEIRINM 376 D+ D Y RQ W D RLS P ++ + A + IW P+ FF N K A F T N +RI GEIL +RL + SC M+L +P+D Q+C ++I SF T ++ +W+ SV ++ D+ +PQF K+ +R +T NYS L E RS+G++LIQ Y+PS LIV ISWVSFW++ PARV+LGV T+LT+++ ++ T ++P+ SYVK+IDV++G C VFA+L+E+ V Y+ ++ +F A+ + A K+NE ++ G + GD NG+ ++++ +N+ Sbjct: 2 DYVTDTYLRQKWSDSRLS---HPDIKSPLDLAXPNLVKAIWKPEVFFPNAKEANFQFVTVPNVLIRIHPNGEILYILRLRLKFSCMMELSRYPLDTQICAMQISSFSKTTKELLLEWDPTHELSVTVAKDLRMPQFEMTKITTNRCHETNHMGNYSCLVAEFHLHRSIGFHLIQSYLPSVLIVAISWVSFWMDVDCVPARVTLGVITLLTVSSQVSGT--SVPQTSYVKAIDVWMGVCTAFVFAALVEFTLVNYLWRKDSDPYMKFDAMTALATIHAVNATSKRNELVELDQLDSIETGIKNDGDNDSQKCNGLRQKSKPPMNL 320
BLAST of gaba-alpha subunit vs. L. salmonis genes
Match: EMLSAG00000004092 (supercontig:LSalAtl2s:LSalAtl2s217:422807:437258:1 gene:EMLSAG00000004092 transcript:EMLSAT00000004092 description:"augustus_masked-LSalAtl2s217-processed-gene-4.1") HSP 1 Score: 191.815 bits (486), Expect = 1.385e-54 Identity = 107/271 (39.48%), Postives = 156/271 (57.56%), Query Frame = 0 Query: 76 FTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGD--VSLPQFKVLGHRQKTIEA--------RNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNR----GATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRI-QMRKN 331 F +D YFRQ+W DPRL + S L +L + + + IW PDTF +N K +Y HK T N+F+RI G I S RLT+ A C MDL+ FP+D Q C +EI SFG+ + +I Y W TS+ +S D + L Q+ ++ +N S +A F R GYYL+QIYIP +LIV SWV+FWL + G PAR SLG T L + T+ + P++ Y ++DV++ CF VFA+L+E+A + ++ + +++KN Sbjct: 123 FLMDCYFRQYWTDPRLVYNS-SKLNELPMNWQXLTKIWRPDTFIINGKNSYLHKMTVPNRFIRISPDGRISYSQRLTVKARCEMDLRKFPLDSQHCPLEIGSFGHGVDEILYNW----TSMPLSMDKKLGLAQYHLISWNNSAFTRYSRNAGGDQNVSVIALHFTFQRRTGYYLLQIYIPLTLIVCCSWVTFWLIKTEKGGEIPARTSLGGTXXLAIVTI-GFGGKSKPRVGYATALDVFIVLCFMTVFAALIEFAFINFIDTLVRRLKKN 387 HSP 2 Score: 62.7734 bits (151), Expect = 1.096e-10 Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIR 73 +D YFRQ+W DPRL ++ L +L + + + IW PDTF +N K +Y H T N+F+RI G I S R Sbjct: 125 MDCYFRQYWTDPRLVYNSS-KLNELPMNWQXLTKIWRPDTFIINGKNSYLHKMTVPNRFIRISPDGRISYSQR 196
BLAST of gaba-alpha subunit vs. L. salmonis genes
Match: EMLSAG00000004091 (supercontig:LSalAtl2s:LSalAtl2s217:408116:410199:1 gene:EMLSAG00000004091 transcript:EMLSAT00000004091 description:"maker-LSalAtl2s217-augustus-gene-4.34") HSP 1 Score: 191.43 bits (485), Expect = 1.608e-54 Identity = 110/303 (36.30%), Postives = 172/303 (56.77%), Query Frame = 0 Query: 60 LRILHTGAILRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTI-----------EARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNR----GATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEA 347 L IL G + + R F++D YFRQ W D RL + + G+ L + ++ IWVPDTF +N K ++ HK T N+F+R+ TG++ S RLTI A+C M+L+ FP D Q+C +++ SFG++ D+ Y+W +V + + L QF ++ + I RN S E F R GY+L+QIY P +LIV SWV+FWL + G PAR LG +VL++ + T PK+ Y ++DV++ CFF VFA+L+E+A + ++ I+ ++ + + QK ++ K EA Sbjct: 100 LSILSMGPVDEA-RNAFSMDCYFRQSWVDERLKYNT-SGVEVLALNWAFLAKIWVPDTFIINGKKSFLHKITVPNRFVRVSPTGKVSYSQRLTILANCIMNLKKFPFDTQICPLKLGSFGHSNKDLIYQWKKP-KAVSFN-KLGLAQFHLINYSSYNIIEPSLRLTEKGNYRNDSSSVMEFVFERQSGYFLLQIYTPLTLIVFCSWVAFWLVKTEKGGEXPARTXLGANSVLSIVNI-GFTGKDRPKVGYATALDVFIILCFFTVFAALVEFACINFIDTFIKWKRIK-IEEQKESDGGKEEA 396 HSP 2 Score: 66.2402 bits (160), Expect = 9.892e-12 Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIR 73 +D YFRQ W D RL ++ G+E L + ++ IWVPDTF +N KK++ H T N+F+R+ TG + S R Sbjct: 117 MDCYFRQSWVDERLKYNTS-GVEVLALNWAFLAKIWVPDTFIINGKKSFLHKITVPNRFVRVSPTGKVSYSQR 188
BLAST of gaba-alpha subunit vs. L. salmonis genes
Match: EMLSAG00000003120 (supercontig:LSalAtl2s:LSalAtl2s1753:14457:18648:1 gene:EMLSAG00000003120 transcript:EMLSAT00000003120 description:"maker-LSalAtl2s1753-augustus-gene-0.11") HSP 1 Score: 189.889 bits (481), Expect = 5.469e-52 Identity = 98/267 (36.70%), Postives = 148/267 (55.43%), Query Frame = 0 Query: 76 FTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLG----------HRQKTIEARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNR 332 + +D YFRQ W D RLSF + + +L + + +N IW PDT+F+N K + HK T N+FLRI G + S RLTI A C M+L+ FP D Q C + I S+GYT ++ Y W D + ++ QF ++ +R+ RN S + F R G++L+QIY P +IV+ SWV+FW+ + P+RVSLGV + L++T + P + Y ++D+++ CF VF SL+EYA + Y++ I K R Sbjct: 529 YLVDAYFRQAWVDQRLSFNATSSVTELPLNWQILNKIWKPDTYFINGKKSKMHKITVPNRFLRISPDGLVSFSQRLTIHAQCLMELKKFPFDSQECPLHIGSYGYTADEVLYDWKDNALEISTLAKATMTQFNLMKWISQAETSITNRKIAAGFRNDSIASINFSFKRQYGFFLLQIYTPMFIIVMCSWVAFWIVKTDAPSRVSLGVASSLSVTKI-GFAGKGKPNVEYPTALDIFIIICFMTVFLSLVEYALINYISVFISRYKAR 794 HSP 2 Score: 62.7734 bits (151), Expect = 1.640e-10 Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIR 73 +D YFRQ W D RLSF+ + +L + + + IW PDT+F+N KK+ H T N+FLRI G + S R Sbjct: 531 VDAYFRQAWVDQRLSFNATSSVTELPLNWQILNKIWKPDTYFINGKKSKMHKITVPNRFLRISPDGLVSFSQR 603
BLAST of gaba-alpha subunit vs. L. salmonis genes
Match: EMLSAG00000006968 (supercontig:LSalAtl2s:LSalAtl2s396:160743:177530:1 gene:EMLSAG00000006968 transcript:EMLSAT00000006968 description:"maker-LSalAtl2s396-augustus-gene-1.5") HSP 1 Score: 177.948 bits (450), Expect = 2.572e-50 Identity = 93/234 (39.74%), Postives = 134/234 (57.26%), Query Frame = 0 Query: 78 LDMYFRQFWQDPRLSFESRPG------LRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE-ARN------------YSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKI 292 +D YFRQ+W+ RLSF + +L + + + IW PDT+F N ++Y H T N+ LRI G+I S+RLTI A CPM L+ FPMD Q C + + S+ YT+ + Y+W +V G + L QF ++ +++ +RN +S L I R GY+LIQIY+P +LIV++SWV FWLNR AT RV LG+TTVLT++T+ + LPK+ Sbjct: 1 MDCYFRQYWRXERLSFTGLKNNTHHLKIDQLSLNVKMLEKIWKPDTYFHNGLSSYIHTITRPNKLLRISEHGDITYSMRLTIKAKCPMMLKSFPMDWQSCPLVLGSYAYTIDQVYYRWQHSSNAVAYEGKLKLSQFDIITTAYRSLNFSRNTDDRYTLPLVGGFSVLQVVIALQRHTGYFLIQIYLPCTLIVVLSWVGFWLNREATSDRVGLGITTVLTLSTIALDSRTDLPKM 234 HSP 2 Score: 59.6918 bits (143), Expect = 9.916e-10 Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFD------RGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIR 73 +D YFRQ+WR RLSF + +++L + + ++ IW PDT+F N +Y H T N+ LRI G I S+R Sbjct: 1 MDCYFRQYWRXERLSFTGLKNNTHHLKIDQLSLNVKMLEKIWKPDTYFHNGLSSYIHTITRPNKLLRISEHGDITYSMR 79
BLAST of gaba-alpha subunit vs. L. salmonis genes
Match: EMLSAG00000002942 (supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-1 gene:EMLSAG00000002942 transcript:EMLSAT00000002942 description:"maker-LSalAtl2s168-augustus-gene-6.6") HSP 1 Score: 166.777 bits (421), Expect = 1.001e-45 Identity = 139/486 (28.60%), Postives = 221/486 (45.47%), Query Frame = 0 Query: 77 TLDMYFRQFWQDPRLSFESRPGLRK--LVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIES----------------------FGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVL----GHRQKTIEARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGLGDGGPPDHNGIPKQTEIRINMHD---MSRSGPGSSSSVRFSNNKGGILVNSPRQVSHHHHPLNQHIPSGLSPISPLATYQGHVPMAVFNNPQMQQDYNEYLLPPDHPRHPSNQHGNAAPTIAPNPKILRGLSPKQIRELECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIY 531 +D+Y RQ W D RL+ PGL + + + +W P+ +F N K A F T N +RI G IL +RL + SC M+L FP+D Q C +EI S T ++ +W D + IS +V +PQF++ Q+T NYS L ++ RS+G++++Q YIP+ LIV+ISWVSFW++ + R +LGVTT+LT+++ + A +P +SYVK+ID+++GAC +FA+LLE+ V YM +R + +K + ++ + +N+ + D P + I + E N + M R+ SS+ V N +G +L+ P T ++ + Q D E + SN G + + +++ S + CK L ID+ SR FP+ F FNL+YW Y Sbjct: 53 VIDLYLRQHWFDSRLN---HPGLLEPMDLNDPNLVKALWKPEVYFPNAKDAEFQYVTVPNVLVRIDPGGAILYMLRLKLKFSCMMELSKFPLDEQYCTMEIASCKIIIHKGIISTFKNHNFFSLIVSKTTKELILRWKDT-KPIDISKEVKMPQFEISTVIPSICQETFHIGNYSCLLAQLHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVESVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFVNYMWRRGK-KKTMYFGIESGSRILENQK-----DKVEDFLVP-LSQINEDNEESCNQANNVAMERAVKKSSTEV---NRRGQVLLMKP------------------------TTKNRRKSNFLWKXSKSQGDDAERRTALNMDVEQSN--GEVRMLKSSSDDLIKESSISEFGLSHCKLALQ---------IDECSRFIFPLCFCIFNLLYWSYY 489
BLAST of gaba-alpha subunit vs. SwissProt
Match: gi|74919269|sp|Q75NA5.2|GBRB_MUSDO (RecName: Full=Gamma-aminobutyric acid receptor subunit beta; AltName: Full=GABA(A) receptor subunit beta; AltName: Full=MdRdl; Flags: Precursor) HSP 1 Score: 444.891 bits (1143), Expect = 9.098e-150 Identity = 219/285 (76.84%), Postives = 247/285 (86.67%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE----ARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMN 349 L ++ DFTLD YFRQFW DPRL++ RPG+ L VG+E+I IWVPDTFFVNEK +YFH ATT N+F+R+ H+G I RSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTM DIRYKWN+G SV +S +VSLPQFKVLGHRQ+ +E NYSRLACEIQFVRSMGYYLIQIYIPS LIV+ISWVSFWLNR ATPARV+LGVTTVLTMTTLM+STNAALPKISYVKSIDVYLG CF MVFASLLEYA+VGYMAKRIQMRK RF+ +QKMAEQKK + ++ Sbjct: 95 LSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAVEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMTIQKMAEQKKQQQLD 379 HSP 2 Score: 112.464 bits (280), Expect = 4.341e-25 Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LD YFRQFW DPRL++ + G+E L VG+E+IK IWVPDTFFVNEK++YFH ATT N+F+R+ H+G+I RSIR T Sbjct: 104 LDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTIT 180 HSP 3 Score: 92.0485 bits (227), Expect = 1.886e-18 Identity = 40/58 (68.97%), Postives = 50/58 (86.21%), Query Frame = 0 Query: 492 ECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLHPDE 549 + KK+++K+LGI PSDIDKYSRI FP+ F+ FNLMYWIIYLHVSD VA+DLVLL ++ Sbjct: 519 KVKKDINKLLGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHVSDVVADDLVLLGEEK 576
BLAST of gaba-alpha subunit vs. SwissProt
Match: gi|635377460|sp|P25123.4|GBRB_DROME (RecName: Full=Gamma-aminobutyric acid receptor subunit beta; AltName: Full=GABA(A) receptor subunit beta; AltName: Full=Protein cyclodiene resistance; Flags: Precursor) HSP 1 Score: 443.736 bits (1140), Expect = 6.260e-149 Identity = 220/282 (78.01%), Postives = 246/282 (87.23%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE----ARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNE 346 L ++ DFTLD YFRQFW DPRL++ RPG+ L VG+E+I IWVPDTFFVNEK +YFH ATT N+F+R+ H+G I RSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTM DIRYKWN+G SV +S +VSLPQFKVLGHRQ+ +E NYSRLACEIQFVRSMGYYLIQIYIPS LIVIISWVSFWLNR ATPARV+LGVTTVLTMTTLM+STNAALPKISYVKSIDVYLG CF MVFASLLEYA+VGYMAKRIQMRK RF+A+QK+AEQKK + Sbjct: 97 LSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQ 378 HSP 2 Score: 112.849 bits (281), Expect = 4.500e-25 Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LD YFRQFW DPRL++ + G+E L VG+E+IK IWVPDTFFVNEK++YFH ATT N+F+R+ H+G+I RSIR T Sbjct: 106 LDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTIT 182 HSP 3 Score: 91.6633 bits (226), Expect = 2.769e-18 Identity = 40/54 (74.07%), Postives = 48/54 (88.89%), Query Frame = 0 Query: 492 ECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLL 545 + KK+++K+LGI PSDIDKYSRI FP+ F+ FNLMYWIIYLHVSD VA+DLVLL Sbjct: 550 KVKKDINKLLGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHVSDVVADDLVLL 603
BLAST of gaba-alpha subunit vs. SwissProt
Match: gi|44887891|sp|Q9BLY8.1|GBRB_DROSI (RecName: Full=Gamma-aminobutyric acid receptor subunit beta; AltName: Full=GABA(A) receptor; AltName: Full=Protein cyclodiene resistance; Flags: Precursor) HSP 1 Score: 443.351 bits (1139), Expect = 1.008e-148 Identity = 219/282 (77.66%), Postives = 246/282 (87.23%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE----ARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNE 346 L ++ DFTLD YFRQFW DPRL++ RPG+ L VG+E+I IWVPDTFFVNEK +YFH ATT N+F+R+ H+G I RSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTM DIRYKWN+G SV +S +VSLPQFKVLGHRQ+ +E NYSRLACEIQFVRSMGYYLIQIYIPS LIV+ISWVSFWLNR ATPARV+LGVTTVLTMTTLM+STNAALPKISYVKSIDVYLG CF MVFASLLEYA+VGYMAKRIQMRK RF+A+QK+AEQKK + Sbjct: 97 LSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQ 378 HSP 2 Score: 112.849 bits (281), Expect = 4.380e-25 Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LD YFRQFW DPRL++ + G+E L VG+E+IK IWVPDTFFVNEK++YFH ATT N+F+R+ H+G+I RSIR T Sbjct: 106 LDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTIT 182 HSP 3 Score: 91.6633 bits (226), Expect = 2.818e-18 Identity = 40/54 (74.07%), Postives = 48/54 (88.89%), Query Frame = 0 Query: 492 ECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLL 545 + KK+++K+LGI PSDIDKYSRI FP+ F+ FNLMYWIIYLHVSD VA+DLVLL Sbjct: 550 KVKKDINKLLGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHVSDVVADDLVLL 603
BLAST of gaba-alpha subunit vs. SwissProt
Match: gi|78099775|sp|Q61603.3|GLRA4_MOUSE (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 265.774 bits (678), Expect = 8.912e-82 Identity = 140/306 (45.75%), Postives = 198/306 (64.71%), Query Frame = 0 Query: 75 DFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQF-----KVLGHRQKTIEARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQ--MRKNRFLALQKMAEQKKNEA-MNQGGQGLG------DGGPPDHNGI 366 D+ ++++ RQ W DPRL++ P L + ++ IW PD FF NEK A FH+ TT+N+ LRI G +L SIRLT+ SCPMDL+ FPMD Q C +++ESFGYTM+D+ ++W + +VQ++ ++LPQF K LG+ K ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N A PARV LG+TTVLTMTT + + A+LPK+SYVK+ID+++ C VFA+LLEYA+V +++++ + MR R Q+M E E+ G GLG DGGP + + I Sbjct: 90 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFMRLRRRQRRQRMEEDIIRESRFYFRGYGLGHCLQARDGGPMEGSSI 394 HSP 2 Score: 67.781 bits (164), Expect = 7.521e-11 Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFTL 78 ++++ RQ W DPRL++ R + L + + IW PD FF NEK A FH+ TTDN+ LRI G +L SIR L Sbjct: 93 VNVFLRQQWNDPRLAY-REYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLIL 169
BLAST of gaba-alpha subunit vs. SwissProt
Match: gi|74958176|sp|O18276.3|GBRB_CAEEL (RecName: Full=Gamma-aminobutyric acid receptor subunit beta; AltName: Full=GABA(A) receptor subunit beta; Flags: Precursor) HSP 1 Score: 265.388 bits (677), Expect = 1.246e-80 Identity = 172/498 (34.54%), Postives = 254/498 (51.00%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLG-HRQKTIEAR---NYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGY----MAKRIQMRKNRFLALQKMAEQKKNEAMNQGG---QGLGDGGPPDHNGIPKQTEIRINMHDMSRSGPGSSSSVRFSNNKGGILVNSPRQVSHHHHPLNQHIPSGLSPISPLATYQGHVPMAVFNNPQMQQDYNEYLLPPDHPRHPSNQHGNAAPTIAPNPKI--LRGLSPKQIRE--------LECKKNL----HKMLGIAPSD-------IDKYSRIFFPISFISFNLMYWIIYLHV 534 + + D+TL MY Q+W D RL + + + ++ + E+ IWVPDTF N+K +Y H+ T N+ LRI G++ +RLT T SC M+L+ FP+D Q C +EIES+GYT S++ KWN L +V +PQF + G H + +I + +Y RL+ Q RS+GY++ Q Y+P LIV++SWVSFW+N AT ARV+LG+TTVLTMTT+ +LP+ISYVKSID+YL CF VFA+LLEYA+V Y + N + + ++ + A+N GL DG P P+ + MS S + ++ S +K P++ S SPI PL + +E PD+PR+ + A P + N K L+G S + + + K+++ + + P+ IDKYSR+ FP+ FI FNL YW Y+ V Sbjct: 92 ISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWNYPL-AVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYWGRERGKGGGGNEW-PVNGANKEDRESAVNVQKWVPSGLMDGVPQ-----PQDRRVEALEEAMSTSNTAAQNNNFESTSK-------PKKRSS-------------SPIPPLCRAGNTI--------------SEESESPDYPRYSTTSLKGARPHASLNHKTHHLKGRSSARAKRRMTLARMNVSMKQSISGIGRRARKVIPTIRVRDVNLIDKYSRVVFPVCFIVFNLFYWSYYMMV 548 HSP 2 Score: 70.0922 bits (170), Expect = 1.967e-11 Identity = 33/87 (37.93%), Postives = 48/87 (55.17%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFTL--DMYFRQF 85 L MY Q+W D RL + I ++++ + E+ + IWVPDTF N+K +Y H+ T N+ LRI G + +R TL M R F Sbjct: 101 LTMYLHQYWTDERLRWSNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNF 187
BLAST of gaba-alpha subunit vs. SwissProt
Match: gi|262527577|sp|Q5JXX5.3|GLRA4_HUMAN (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 261.151 bits (666), Expect = 1.505e-80 Identity = 137/309 (44.34%), Postives = 194/309 (62.78%), Query Frame = 0 Query: 75 DFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQF-----KVLGHRQKTIEARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQG------GQGLG------DGGPPDHNGI 366 D+ ++++ RQ W DPRLS+ P L + ++ IW PD FF NEK A FH+ TT+N+ LRI G +L SIRLT+ SC MDL+ FPMD Q C +++ESFGYTM D+ ++W + +VQ++ ++LPQF K LG K ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N A PARV LG+TTVLTMTT + + A+LPK+SYVK+ID+++ C VFA+LLEYA++ +++++ K ++ Q+ E + Q G GLG DGGP + +GI Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAINFVSRQ---HKEFIRLRRRQRRQRLEEDIIQESRFYFRGYGLGHCLQARDGGPMEGSGI 395 HSP 2 Score: 69.3218 bits (168), Expect = 2.021e-11 Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFTL 78 ++++ RQ W DPRLS+ R + L + + IW PD FF NEK A FH+ TTDN+ LRI G +L SIR L Sbjct: 94 VNVFLRQQWNDPRLSY-REYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLIL 170
BLAST of gaba-alpha subunit vs. SwissProt
Match: gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 261.922 bits (668), Expect = 3.335e-80 Identity = 129/278 (46.40%), Postives = 190/278 (68.35%), Query Frame = 0 Query: 75 DFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIEARNYS--RLAC-EIQF--VRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKR----IQMRKNRFLALQKMAEQK 343 D+ ++++ RQ W DPRL++ P L + ++ IW PD FF NEK A FH+ TT+N+ LRI G +L SIRLT+T SCPMDL+ FPMD Q C +++ESFGYTM+D+ ++W D VQ++ ++LPQF + + ++Y+ + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N A PARV+LG+TTVLTMTT + + A+LPK+SYVK+ID+++ C VF++LLEYA+V +++++ ++ R+ R + A +K Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDE-APVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEK 365 HSP 2 Score: 68.5514 bits (166), Expect = 4.116e-11 Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFTL 78 ++++ RQ W DPRL++ + L + + IW PD FF NEK A FH+ TTDN+ LRI G +L SIR TL Sbjct: 93 VNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTL 169
BLAST of gaba-alpha subunit vs. SwissProt
Match: gi|116242496|sp|O75311.2|GLRA3_HUMAN (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 261.922 bits (668), Expect = 3.335e-80 Identity = 129/278 (46.40%), Postives = 190/278 (68.35%), Query Frame = 0 Query: 75 DFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIEARNYS--RLAC-EIQF--VRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKR----IQMRKNRFLALQKMAEQK 343 D+ ++++ RQ W DPRL++ P L + ++ IW PD FF NEK A FH+ TT+N+ LRI G +L SIRLT+T SCPMDL+ FPMD Q C +++ESFGYTM+D+ ++W D VQ++ ++LPQF + + ++Y+ + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N A PARV+LG+TTVLTMTT + + A+LPK+SYVK+ID+++ C VF++LLEYA+V +++++ ++ R+ R + A +K Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDE-APVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEK 365 HSP 2 Score: 68.5514 bits (166), Expect = 4.044e-11 Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFTL 78 ++++ RQ W DPRL++ + L + + IW PD FF NEK A FH+ TTDN+ LRI G +L SIR TL Sbjct: 93 VNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTL 169
BLAST of gaba-alpha subunit vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 261.922 bits (668), Expect = 3.406e-80 Identity = 129/278 (46.40%), Postives = 190/278 (68.35%), Query Frame = 0 Query: 75 DFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIEARNYS--RLAC-EIQF--VRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKR----IQMRKNRFLALQKMAEQK 343 D+ ++++ RQ W DPRL++ P L + ++ IW PD FF NEK A FH+ TT+N+ LRI G +L SIRLT+T SCPMDL+ FPMD Q C +++ESFGYTM+D+ ++W D VQ++ ++LPQF + + ++Y+ + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N A PARV+LG+TTVLTMTT + + A+LPK+SYVK+ID+++ C VF++LLEYA+V +++++ ++ R+ R + A +K Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDE-APVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEK 365 HSP 2 Score: 68.5514 bits (166), Expect = 4.301e-11 Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFTL 78 ++++ RQ W DPRL++ + L + + IW PD FF NEK A FH+ TTDN+ LRI G +L SIR TL Sbjct: 93 VNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTL 169
BLAST of gaba-alpha subunit vs. SwissProt
Match: gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 260.766 bits (665), Expect = 5.854e-80 Identity = 133/291 (45.70%), Postives = 188/291 (64.60%), Query Frame = 0 Query: 75 DFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKW-NDGLTSVQISGDVSLPQF-----KVLGHRQKTIEARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMA---KRIQMRKNRFLALQKMAEQKKNEAMNQGGQGLG 356 D+ ++++ RQ W D RL++ P L + ++ IW PD FF NEK A FH TT+N+ LRI G++L SIRLT+T SCPMDL+ FPMD Q C +++ESFGYTM+D+ ++W +DG VQ++ ++LPQF K LG+ K ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N A PARV+LG+TTVLTMTT + + A+LPK+SYVK+ID+++ C VFA+LLEYA+V +++ K + R K + + N G G+G Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDG--PVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMG 378 HSP 2 Score: 66.6254 bits (161), Expect = 1.615e-10 Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFTL 78 ++++ RQ W D RL++ + L + + IW PD FF NEK A FHD TTDN+ LRI G +L SIR TL Sbjct: 94 VNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTL 170
BLAST of gaba-alpha subunit vs. nr
Match: gi|115361507|gb|ABI95854.1| (GABA-alpha subunit, partial [Lepeophtheirus salmonis]) HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0 Identity = 279/323 (86.38%), Postives = 285/323 (88.24%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIEAR----NYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGLGDGGPPDHNGIPKQTEIRINMHDMSRSGPGSS 387 + + DFTLDMYFRQFWQDPRLSF RPGL KLVVGAEYI LIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGL SVQIS DVSLPQFKVLGHRQKTIEA NYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGA PARV LGVTTV TMTTLMASTNAALPKISYVKSIDVYLGACFF+VFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMN L DG DH G+PKQT + +HD GSS Sbjct: 48 VSEVMMDFTLDMYFRQFWQDPRLSFTGRPGLEKLVVGAEYIRLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLNSVQISSDVSLPQFKVLGHRQKTIEASLSTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGAAPARVGLGVTTVHTMTTLMASTNAALPKISYVKSIDVYLGACFFIVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNASNAALNDG---DH-GMPKQTTVHFKVHDPKMHCKGSS 366 HSP 2 Score: 136.346 bits (342), Expect = 5.829e-31 Identity = 64/77 (83.12%), Postives = 67/77 (87.01%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LDMYFRQFW+DPRLSF GLEKLVVGAEYI+LIWVPDTFFVNEK AYFH ATT+NQFLRILHTG ILRSIR T Sbjct: 57 LDMYFRQFWQDPRLSFTGRPGLEKLVVGAEYIRLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTIT 133 HSP 3 Score: 83.5741 bits (205), Expect = 2.533e-13 Identity = 36/58 (62.07%), Postives = 45/58 (77.59%), Query Frame = 0 Query: 492 ECK-KNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLHPD 548 EC K+L+KM G+ SDIDKYSR+ FP++F LMYWIIY H+SD+V +DLV LHPD Sbjct: 421 ECDMKDLNKMFGMTASDIDKYSRVIFPVTFTCLQLMYWIIYQHLSDDVVDDLVYLHPD 478
BLAST of gaba-alpha subunit vs. nr
Match: gi|1325285574|ref|XP_023327509.1| (gamma-aminobutyric acid receptor subunit beta-like [Eurytemora affinis]) HSP 1 Score: 545.428 bits (1404), Expect = 0.000e+0 Identity = 315/523 (60.23%), Postives = 359/523 (68.64%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIEAR----NYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGLGDGGPPD-HNGIPKQTEIRINMHD---------MSRSG----PGSSSSVRFSNNKGGILVNSPRQVSHHHHP------LNQHIPSGLSP--ISPLATYQGHVPMAVFNNPQ--MQQDYNEYLLPPDHPRHPSNQHGNAAPTIAPNPKILRG-----------------LSPKQIRELECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLH 546 + + DFTLDMYFRQFW+DPRL FE + GL KLVVGAEYINLIW PDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFP FGYTM+DIRY+WNDGL SVQ+SGDVSLPQFKVLGHRQKTIEA NYSRLACEIQFVRSMGYYLIQIYIPSSLIV+ISWVSFWLNRGATPARV LGVTTVLTMTTL++STN+ALPKISYVKSIDVYL ACFFMVFASL+EYASVGYMAKRIQMRKNRFLA+QKMAEQKKNEA++ + + D + +PKQTEIR+NMHD M R G GS+S + N GG L + HH P N G+SP I + V FN + + +E ++ PD S+ H N AP L+ +P IR +++ MLG+A SDIDKYSRI FP++F F LMYW+IY H++ +DLVLL+ Sbjct: 75 VSEVMMDFTLDMYFRQFWRDPRLQFEKKKGLEKLVVGAEYINLIWTPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFP-----------PFGYTMNDIRYEWNDGLNSVQVSGDVSLPQFKVLGHRQKTIEASLSTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVVISWVSFWLNRGATPARVGLGVTTVLTMTTLISSTNSALPKISYVKSIDVYLAACFFMVFASLIEYASVGYMAKRIQMRKNRFLAIQKMAEQKKNEALHSSNANIHEAVNADVSSNMPKQTEIRLNMHDPLLRRNAGSMMRGGGQGFTGSTSHLLPGANHGGPLPQIQDGLLHHQAPPLLQCKKNLQKMGGISPSDIDKYSRVLFPVSFTCFNLMYWIIYMNISEEVV-PDLVLLGSSVHFNLGVKRAPEHLELKYNTTLYKHNSIPMNMVPLAAPLSIRS---HSHINSMLGMAASDIDKYSRIVFPVTFFCFQLMYWVIYDHLAQVYIDDLVLLN 582 HSP 2 Score: 138.272 bits (347), Expect = 3.910e-31 Identity = 63/77 (81.82%), Postives = 66/77 (85.71%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LDMYFRQFWRDPRL F++ GLEKLVVGAEYI LIW PDTFFVNEK AYFH ATT+NQFLRILHTG ILRSIR T Sbjct: 84 LDMYFRQFWRDPRLQFEKKKGLEKLVVGAEYINLIWTPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTIT 160
BLAST of gaba-alpha subunit vs. nr
Match: gi|1277390359|gb|ATV93516.1| (gamma-aminobutyric acid A receptor subunit 1 [Lepeophtheirus salmonis]) HSP 1 Score: 545.428 bits (1404), Expect = 0.000e+0 Identity = 282/323 (87.31%), Postives = 286/323 (88.54%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIEAR----NYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGLGDGGPPDHNGIPKQTEIRINMHDMSRSGPGSS 387 L + DFTLDMYFRQFWQDPRLSF RPGL KLVVGAEYI LIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGL SVQIS DVSLPQFKVLGHRQKTIEA NYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGA PARV LGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMN L DG DH G+PKQT + +HD GSS Sbjct: 80 LSEVEMDFTLDMYFRQFWQDPRLSFTGRPGLEKLVVGAEYIRLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLNSVQISSDVSLPQFKVLGHRQKTIEASLSTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGAAPARVGLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNASNAALNDG---DH-GMPKQTTVHFKVHDPKMHCKGSS 398 HSP 2 Score: 135.961 bits (341), Expect = 1.073e-30 Identity = 64/77 (83.12%), Postives = 67/77 (87.01%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LDMYFRQFW+DPRLSF GLEKLVVGAEYI+LIWVPDTFFVNEK AYFH ATT+NQFLRILHTG ILRSIR T Sbjct: 89 LDMYFRQFWQDPRLSFTGRPGLEKLVVGAEYIRLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTIT 165 HSP 3 Score: 85.5001 bits (210), Expect = 5.924e-14 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0 Query: 492 ECK-KNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLHPD 548 EC K+L+KM G+ SDIDKYSR+ FP++F F LMYWIIY H+SD+V +DLV LHPD Sbjct: 453 ECDMKDLNKMFGMTASDIDKYSRVIFPVTFTCFQLMYWIIYQHLSDDVVDDLVYLHPD 510
BLAST of gaba-alpha subunit vs. nr
Match: gi|766927524|ref|XP_011495767.1| (PREDICTED: gamma-aminobutyric acid receptor subunit beta isoform X2 [Ceratosolen solmsi marchali]) HSP 1 Score: 513.842 bits (1322), Expect = 2.111e-175 Identity = 290/485 (59.79%), Postives = 325/485 (67.01%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE----ARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGL-GDGGPPDHNGIPKQTEIRINMHDMSRSGPGSSSSVRFSNNKGGILVNSPR-QVSHHHHPLNQHIPSGLSPISPL-ATYQGHVPMAVFNNPQMQQDYNEYLLPPDHPRHPSNQHGNAAPTIAPNPKILRGLSPKQIRELECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLH 546 L ++ DFTLD YFRQFW DPRL+F+ RPG+ L VG+E+I IWVPDTFFVNEK +YFH ATT N+F+RI H+G I RSIRLTITASCPM+LQYFPMDRQLC IEIESFGYTM DIRYKWN+GLTSV +S DVSLPQFKVLGHRQ+ +E NYSRLACEIQFVRSMGYYLIQIYIPS LIVIISWVSFWLNR ATPARV+LGVTTVLTMTTLM+STNAALPKISYVKSIDVYLG CF MVFASLLEYA+VGYMAKRIQMRKNRF K+AE K N G G+ GD G DH PKQTE+R +HD +++KGG L N+ + P QH+ IS L A H + F P H +LGI PSDIDKYSRI FP+ F+ FNLMYWIIYLH+SD VA+DLVLL Sbjct: 83 LSEVKMDFTLDFYFRQFWTDPRLAFKKRPGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGLTSVGVSNDVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRF---AKIAESMKAARENPGPPGVPGDHG--DH--APKQTEVRFKVHDPK------------AHSKGGTLENTINGRADEEAPPAPQHLIHPGKDISKLYAQEDAHSALQSFPKPTK----------------------------------------------------HTILGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVVADDLVLLE 496 HSP 2 Score: 113.62 bits (283), Expect = 3.475e-23 Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LD YFRQFW DPRL+F + G+E L VG+E+IK IWVPDTFFVNEK++YFH ATT N+F+RI H+G+I RSIR T Sbjct: 92 LDFYFRQFWTDPRLAFKKRPGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSNEFIRIHHSGSITRSIRLTIT 168
BLAST of gaba-alpha subunit vs. nr
Match: gi|805797817|ref|XP_012143665.1| (PREDICTED: gamma-aminobutyric acid receptor subunit beta [Megachile rotundata]) HSP 1 Score: 510.375 bits (1313), Expect = 1.249e-174 Identity = 286/477 (59.96%), Postives = 325/477 (68.13%), Query Frame = 0 Query: 75 DFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE----ARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGL-GDGGPPDHNGIPKQTEIRINMHDMSRSGPGSSSSVRFSNNKGGILVNSPRQVSHHHHPLNQHIPSGLSPISPLATYQGHVPMAVFNNPQMQQDYNEYLLPPDHPRHPSNQHGNAAPTIAPNPKILRGLSPKQIRELECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLH 546 DFTLD YFRQFW DPRL+F+ RPG+ L VG+E+I IWVPDTFFVNEK +YFH ATT N+F+RI H+G I RSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTM DIRYKWN+G SV +S +VSLPQFKVLGHRQ+ +E NYSRLACEIQFVRSMGYYLIQIYIPS LIVIISWVSFWLNR ATPARV+LGVTTVLTMTTLM+STNAALPKISYVKSIDVYLG CF MVFASLLEYA+VGYMAKRIQMRKNRF QK+AE K N G G+ GD G DH PKQTE+R +HD +++KGG L N T G +E P + +G A AP P+ L + K++ K+ G+ PSDIDKYSRI FP+ F+ FNLMYWIIYLH+SD VA+DLVLL Sbjct: 51 DFTLDFYFRQFWTDPRLAFKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRF---QKIAESMKTARENPGPPGVPGDHG--DH--APKQTEVRFKVHDPK------------AHSKGGTLEN---------------------------TINGRA--------------DEEAAPAKGGTLENTINGRADEEAAPAPQHL----------IHPGKDISKLYGMTPSDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVVADDLVLLE 457 HSP 2 Score: 114.39 bits (285), Expect = 1.306e-23 Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LD YFRQFW DPRL+F + G+E L VG+E+IK IWVPDTFFVNEK++YFH ATT N+F+RI H+G+I RSIR T Sbjct: 54 LDFYFRQFWTDPRLAFKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTIT 130
BLAST of gaba-alpha subunit vs. nr
Match: gi|269856295|gb|ACZ51430.1| (GABA-gated chloride channel, partial [Nasonia vitripennis]) HSP 1 Score: 510.375 bits (1313), Expect = 1.249e-174 Identity = 289/485 (59.59%), Postives = 324/485 (66.80%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE----ARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGL-GDGGPPDHNGIPKQTEIRINMHDMSRSGPGSSSSVRFSNNKGGILVNSPR-QVSHHHHPLNQHIPSGLSPISPL-ATYQGHVPMAVFNNPQMQQDYNEYLLPPDHPRHPSNQHGNAAPTIAPNPKILRGLSPKQIRELECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLH 546 L ++ DFTLD YFRQFW DPRL+F+ R G+ L VG+E+I IWVPDTFFVNEK +YFH ATT N+F+RI HTG I RSIRLTITASCPM+LQYFPMDRQLC IEIESFGYTM DIRYKWN+GL SV +S DVSLPQFKVLGHRQ+ +E NYSRLACEIQFVRSMGYYLIQIYIPS LIVIISWVSFWLNR ATPARV+LGVTTVLTMTTLM+STNAALPKISYVKSIDVYLG CF MVFASLLEYA+VGYMAKRIQMRKNRF K+AE K N G G+ GD G DH PKQTE+R +HD +++KGG L N+ + P QH+ IS L A + H + F P H +LGI PSDIDKYSRI FP+ F+ FNLMYWIIYLH+SD VA+DLVLL Sbjct: 44 LSEVKMDFTLDFYFRQFWTDPRLAFKKRAGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSNEFIRIHHTGSITRSIRLTITASCPMNLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGLASVGVSNDVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRF---AKIAESMKAARENPGPPGVPGDHG--DH--APKQTEVRFKVHDPK------------AHSKGGTLENTINGRADEEAPPPPQHLIHPGKDISKLYAQEEAHSALQTFPKPTK----------------------------------------------------HTILGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVVADDLVLLE 457 HSP 2 Score: 115.931 bits (289), Expect = 5.257e-24 Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LD YFRQFW DPRL+F + G+E L VG+E+IK IWVPDTFFVNEK++YFH ATT N+F+RI HTG+I RSIR T Sbjct: 53 LDFYFRQFWTDPRLAFKKRAGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSNEFIRIHHTGSITRSIRLTIT 129
BLAST of gaba-alpha subunit vs. nr
Match: gi|1032747868|ref|XP_016845784.1| (PREDICTED: gamma-aminobutyric acid receptor subunit beta isoform X11 [Nasonia vitripennis]) HSP 1 Score: 510.375 bits (1313), Expect = 1.366e-174 Identity = 288/491 (58.66%), Postives = 324/491 (65.99%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE----ARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGL-GDGGPPDHNGIPKQTEIRINMHDMSRSGPGSSSSVRFSNNKGGILVNSPRQVSHHHHPLNQHIPSGLSPISPLATYQGHVPMAVFNNPQMQQDYNEYLLPPDHPRHP--------SNQHGNAAPTIAPNPKILRGLSPKQIRELECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLH 546 L ++ DFTLD YFRQFW DPRL+F+ R G+ L VG+E+I IWVPDTFFVNEK +YFH ATT N+F+RI HTG I RSIRLTITASCPM+LQYFPMDRQLC IEIESFGYTM DIRYKWN+GL SV +S DVSLPQFKVLGHRQ+ +E NYSRLACEIQFVRSMGYYLIQIYIPS LIVIISWVSFWLNR ATPARV+LGVTTVLTMTTLM+STNAALPKISYVKSIDVYLG CF MVFASLLEYA+VGYMAKRIQMRKNRF K+AE K N G G+ GD G DH PKQTE+R +HD +++KGG L N+ + P PP H HP + + ++A P P H +LGI PSDIDKYSRI FP+ F+ FNLMYWIIYLH+SD VA+DLVLL Sbjct: 45 LSEVKMDFTLDFYFRQFWTDPRLAFKKRAGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSNEFIRIHHTGSITRSIRLTITASCPMNLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGLASVGVSNDVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRF---AKIAESMKAARENPGPPGVPGDHG--DH--APKQTEVRFKVHDPK------------AHSKGGTLENTINGRADEEAP----------------------------------------PPPQHLIHPGKDISKLYAQEEAHSALQTFPKP------------------TKHTILGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVVADDLVLLE 458 HSP 2 Score: 115.546 bits (288), Expect = 5.362e-24 Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LD YFRQFW DPRL+F + G+E L VG+E+IK IWVPDTFFVNEK++YFH ATT N+F+RI HTG+I RSIR T Sbjct: 54 LDFYFRQFWTDPRLAFKKRAGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSNEFIRIHHTGSITRSIRLTIT 130
BLAST of gaba-alpha subunit vs. nr
Match: gi|1101351108|ref|XP_018901515.1| (PREDICTED: gamma-aminobutyric acid receptor subunit beta isoform X1 [Bemisia tabaci]) HSP 1 Score: 512.301 bits (1318), Expect = 2.257e-174 Identity = 282/488 (57.79%), Postives = 332/488 (68.03%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE----ARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKM-AEQKKNEAMNQGGQGLGDGGPPDHNGIPKQTEIRINMHDMSRSGPGSSSSVRFSNNKGGILVNSPRQVSHHHHPLNQHIPSGLSPISP--LATYQGHVPMAVFNNPQMQQDYNEYLLPPDHPRHPSNQHGNAAPTIAPNPKILRGLSPKQIRELECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLHPDE 549 L ++ DFTLD YFRQFW DPRL+F+ RPG+ L VG+E+I IWVPDTFFVNEK +YFH ATT N+F+RI H+G I RSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTM DIRYKWN+G SV +S +VSLPQFKVLGHRQ+ +E NYSRLACEIQFVRSMGYYLIQIYIPS LIVIISWVSFWLNR ATPARV+LGVTTVLTMTTLM+STNAALPKISYVKSIDVYLG CF MVFASLLEYA+VGYMAKRIQMRKNRF+A+QK+ A+QKK + G G D H + + I + + K ++ +VS + H+ P + Y+ H P A F ++ N + P+ QH I PN K+++K+ GI PSDIDKYSRI FP+ F+ FNLMYWIIYLH+SD VA+DLVLL D+ Sbjct: 83 LSEVKMDFTLDFYFRQFWTDPRLAFQKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRFMAIQKLQADQKKGVEAHVSGVGGDDHQATKHTSVASLNQRHIQVQGL----------------KNFLIYQPKEKVSSQ---CSSHMQQYTRPRNSDNEVRYKVHDPKAHFKGGTLENTING--RADEEAATPAPQH-----LIHPN------------------KDINKLYGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVVADDLVLLEEDK 526 HSP 2 Score: 114.775 bits (286), Expect = 2.165e-23 Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LD YFRQFW DPRL+F + G+E L VG+E+IK IWVPDTFFVNEK++YFH ATT N+F+RI H+G+I RSIR T Sbjct: 92 LDFYFRQFWTDPRLAFQKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTIT 168
BLAST of gaba-alpha subunit vs. nr
Match: gi|377550340|dbj|BAL63029.1| (GABA-gated chloride channel subunit [Sogatella furcifera]) HSP 1 Score: 509.99 bits (1312), Expect = 3.348e-174 Identity = 284/485 (58.56%), Postives = 324/485 (66.80%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE----ARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGLGDGGPPDHNGIPKQTEIRINMHDMSRSGPGSSSSVRFSNNKGGILVNSPRQVSHHHHPLNQHIPSGLSPISPLATYQGHVPMAVFNNPQMQQDYNEYLLPPDHPRHPSNQHGNAAPTIAPNPKILRGLSPKQIRELECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLHPDE 549 L ++ DFTLD YFRQFW DPRL+F RPG+ L VG+E+I IWVPDTFFVNEK +YFH ATT N+F+RI H+G I RSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTM DIRYKWN+G SV +S +VSLPQFKVLGHRQ+ +E NYSRLACEIQFVRSMGYYLIQIYIPS LIVIISWVSFWLNR ATPARV+LGVTTVLTMTTLM+STNAALPKISYVKSIDVYLG CF MVFASLLEYA+VGYMAKRIQMRKNRF+A+QK+AEQK+ EA G+ G P DH PKQTE+R +HD ++ KGG L N+ I+ A + H+P P H HP L G++P I DKYSRI FP+ F+ FNLMYWIIYLH+SD VA+DLVLL D+ Sbjct: 80 LSEVKMDFTLDFYFRQFWTDPRLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRFMAIQKIAEQKQKEAAGH-VPGVPGGDPADHA--PKQTEVRFKVHDPK------------AHFKGGTLENT---------------------INGRADEEVHLPA------------------PQHLIHPGKDINK-----------LYGITPSDI--------------------DKYSRIVFPVCFVCFNLMYWIIYLHISDVVADDLVLLEEDK 479 HSP 2 Score: 113.62 bits (283), Expect = 3.498e-23 Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LD YFRQFW DPRL+F + G+E L VG+E+IK IWVPDTFFVNEK++YFH ATT N+F+RI H+G+I RSIR T Sbjct: 89 LDFYFRQFWTDPRLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTIT 165
BLAST of gaba-alpha subunit vs. nr
Match: gi|1351635298|ref|XP_024083544.1| (gamma-aminobutyric acid receptor subunit beta isoform X9 [Cimex lectularius]) HSP 1 Score: 512.686 bits (1319), Expect = 3.665e-174 Identity = 287/497 (57.75%), Postives = 336/497 (67.61%), Query Frame = 0 Query: 69 LRSIRYDFTLDMYFRQFWQDPRLSFESRPGLRKLVVGAEYINLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLTSVQISGDVSLPQFKVLGHRQKTIE----ARNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPARVSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQMRKNRFLALQKMAEQKKNEAMNQGGQGLGDGGPPDHNGIPKQTEIRINMHDMSRSGPGSSSSVRFSNNKGGILVNSPRQVSHHHHPLNQHIPSGLSPISPL------------ATYQGHVPMAVFNNPQMQQDYNEYLLPPDHPRHPSNQHGNAAPTIAPNPKILRGLSPKQIRELECKKNLHKMLGIAPSDIDKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLHPDE 549 L ++ DFTLD YFRQFW DPRL+F + G+ L VG+E+I IWVPDTFFVNEK +YFH ATT N+F+RI H+G I RSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTM DIRYKWN+G SV +S +VSLPQFKVLGHRQ+ +E NYSRLACEIQFVRSMGYYLIQIYIPS LIVIISWVSFWLNR ATPARV+LGVTTVLTMTTLM+STNAALPKISYVKSIDVYLG CF MVFASLLEYA+VGYMAKRIQMRKNRFLA+QK+A+++ NQ + GG PDH PKQT R H + P SS + + RQ + L P P+ Y+ H P A F +++ N G A +A I+ + P+ I L+ K+ +K+ GI S IDKYSRI FP+ F+ FNLMYWIIYLH+SD VA+DLV L D+ Sbjct: 83 LSEVKMDFTLDFYFRQFWTDPRLAFRKQKGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRFLAIQKLAQEQ-----NQKTEPHPPGGDPDH--APKQT--RKKGHQVQMRDPSIISSYAATLPPSKAVHQERRQQMQQTRDPTSIYAATLPPPKPVHPERRQQMQQTEVRYKLHDPKAHFKGGKLENTIN----------------GRAEEEVAGRSAIVIPI-PQHI--LQPTKDYNKLYGITASGIDKYSRIVFPVCFVCFNLMYWIIYLHISDVVADDLVFLEKDK 551 HSP 2 Score: 115.161 bits (287), Expect = 1.576e-23 Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 0 Query: 1 LDMYFRQFWRDPRLSFDRGIGLEKLVVGAEYIKLIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRYDFT 77 LD YFRQFW DPRL+F + G+E L VG+E+IK IWVPDTFFVNEK++YFH ATT N+F+RI H+G+I RSIR T Sbjct: 92 LDFYFRQFWTDPRLAFRKQKGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTIT 168 The following BLAST results are available for this feature:
BLAST of gaba-alpha subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of gaba-alpha subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of gaba-alpha subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold155_size301336:267752..273535+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold155_size301336-snap-gene-2.8 ID=maker-scaffold155_size301336-snap-gene-2.8|Name=gaba-alpha subunit|organism=Tigriopus kingsejongensis|type=gene|length=5784bp|location=Sequence derived from alignment at scaffold155_size301336:267752..273535+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'gaba-alpha subunit' has the following synonyms
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