atp synthase lipid-binding mitochondrial precursor, maker-scaffold1655_size32039-snap-gene-0.10 (gene) Tigriopus kingsejongensis

Overview
Nameatp synthase lipid-binding mitochondrial precursor
Unique Namemaker-scaffold1655_size32039-snap-gene-0.10
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. L. salmonis genes
Match: EMLSAG00000001048 (supercontig:LSalAtl2s:LSalAtl2s1172:43015:43503:-1 gene:EMLSAG00000001048 transcript:EMLSAT00000001048 description:"maker-LSalAtl2s1172-augustus-gene-0.33")

HSP 1 Score: 164.851 bits (416), Expect = 8.033e-54
Identity = 93/134 (69.40%), Postives = 101/134 (75.37%), Query Frame = 0 
Query:   17 AKLLDQNPSKKMANFVRLTCSRGLLAQWQRPAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            A+L   N S+   + VR  C   L  Q        AWT        ++ARA+QTS+ K DIDSAAKFIGAGAATVGVAGSGAGIGSVFGSL+IGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:    5 ARLATSNVSRSTLSGVR--CQYALARQ-------NAWTP-------IAARAIQTSSVKSDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 122
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. L. salmonis genes
Match: EMLSAG00000012282 (supercontig:LSalAtl2s:LSalAtl2s896:337982:338251:1 gene:EMLSAG00000012282 transcript:EMLSAT00000012282 description:"augustus-LSalAtl2s896-processed-gene-3.1")

HSP 1 Score: 118.242 bits (295), Expect = 7.329e-36
Identity = 65/85 (76.47%), Postives = 68/85 (80.00%), Query Frame = 0 
Query:   66 RALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            RA+QT   K DI SAAKFIGAGA TV VAGSG  IGSVFGSL I YA NPSLKQQLFSY IL  + SE+MGLFCLMMAFLLLF F
Sbjct:    7 RAIQTFFVKSDIGSAAKFIGAGATTVRVAGSG--IGSVFGSLGICYAPNPSLKQQLFSYTILRLSFSESMGLFCLMMAFLLLFTF 89
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Match: gi|12585194|sp|Q9U505.1|AT5G_MANSE (RecName: Full=ATP synthase lipid-binding protein, mitochondrial; AltName: Full=ATPase protein 9; AltName: Full=ATPase subunit c; Flags: Precursor)

HSP 1 Score: 160.229 bits (404), Expect = 2.224e-50
Identity = 83/108 (76.85%), Postives = 92/108 (85.19%), Query Frame = 0 
Query:   46 RPAVSAAWTTQ---ALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            RP  + +  TQ   A  + + + R+ QT++  KDIDSAAKFIGAGAATVGVAGSGAGIG+VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:   24 RPLAAVSTQTQLVPAAPAQLSAVRSFQTTSVTKDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 131
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Match: gi|461590|sp|P17605.2|AT5G1_SHEEP (RecName: Full=ATP synthase F(0) complex subunit C1, mitochondrial; AltName: Full=ATP synthase lipid-binding protein; AltName: Full=ATP synthase proteolipid P1; AltName: Full=ATPase protein 9; AltName: Full=ATPase subunit c; Flags: Precursor)

HSP 1 Score: 160.229 bits (404), Expect = 2.718e-50
Identity = 83/123 (67.48%), Postives = 99/123 (80.49%), Query Frame = 0 
Query:   35 TCSRGL--------LAQWQRPAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFA 149
            +C+RGL        L++ + P+V  ++++  L    V+ R  QTS   +DID+AAKFIGAGAATVGVAGSGAGIG+VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLM+AFL+LFA
Sbjct:   16 SCTRGLIRPVSASFLSRPEIPSVQPSYSSGPLQ---VARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Match: gi|461592|sp|Q06055.1|AT5G2_HUMAN (RecName: Full=ATP synthase F(0) complex subunit C2, mitochondrial; AltName: Full=ATP synthase lipid-binding protein; AltName: Full=ATP synthase proteolipid P2; AltName: Full=ATP synthase proton-transporting mitochondrial F(0) complex subunit C2; AltName: Full=ATPase protein 9; AltName: Full=ATPase subunit c; Flags: Precursor)

HSP 1 Score: 160.229 bits (404), Expect = 3.624e-50
Identity = 82/110 (74.55%), Postives = 96/110 (87.27%), Query Frame = 0 
Query:   45 QRPAV--SAAWTTQALSSPV---VSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFA 149
            +RP +    + ++ A+S P+   VS+R+ QTSA  +DID+AAKFIGAGAATVGVAGSGAGIG+VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLM+AFL+LFA
Sbjct:   31 KRPEILTDESLSSLAVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Match: gi|68565129|sp|Q5RAP9.1|AT5G2_PONAB (RecName: Full=ATP synthase F(0) complex subunit C2, mitochondrial; AltName: Full=ATP synthase lipid-binding protein; AltName: Full=ATP synthase proteolipid P2; AltName: Full=ATPase protein 9; AltName: Full=ATPase subunit c; Flags: Precursor)

HSP 1 Score: 159.458 bits (402), Expect = 7.218e-50
Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = 0 
Query:   45 QRPAV--SAAWTTQALSSPV---VSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFA 149
            +RP +    + ++ A+S P+   VS+R  QTSA  +DID+AAKFIGAGAATVGVAGSGAGIG+VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLM+AFL+LFA
Sbjct:   31 KRPEILTDESLSSLAVSRPLTSLVSSRNFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Match: gi|416684|sp|P32876.1|AT5G1_BOVIN (RecName: Full=ATP synthase F(0) complex subunit C1, mitochondrial; AltName: Full=ATP synthase lipid-binding protein; AltName: Full=ATP synthase proteolipid P1; AltName: Full=ATPase protein 9; AltName: Full=ATPase subunit c; Flags: Precursor)

HSP 1 Score: 158.688 bits (400), Expect = 1.127e-49
Identity = 81/120 (67.50%), Postives = 94/120 (78.33%), Query Frame = 0 
Query:   35 TCSRGLLAQ-----WQRPAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFA 149
            +C+RGL+         RP + +   + +     V+ R  QTS   +DID+AAKFIGAGAATVGVAGSGAGIG+VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLM+AFL+LFA
Sbjct:   16 SCTRGLIRPVSASFLSRPEIQSVQPSYSSGPLQVARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Match: gi|81903631|sp|Q9CR84.1|AT5G1_MOUSE (RecName: Full=ATP synthase F(0) complex subunit C1, mitochondrial; AltName: Full=ATP synthase lipid-binding protein; AltName: Full=ATP synthase proteolipid P1; AltName: Full=ATPase protein 9; AltName: Full=ATPase subunit c; Flags: Precursor)

HSP 1 Score: 157.918 bits (398), Expect = 2.396e-49
Identity = 82/120 (68.33%), Postives = 95/120 (79.17%), Query Frame = 0 
Query:   35 TCSRGLL-----AQWQRPAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFA 149
            +C+RGL+     +   RP   +   + + S   V+ R  QTS   +DID+AAKFIGAGAATVGVAGSGAGIG+VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLM+AFL+LFA
Sbjct:   16 SCTRGLIRPVSASLLSRPEAPSKQPSCSSSPLQVARREFQTSVISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Match: gi|114680|sp|P07926.1|AT5G2_BOVIN (RecName: Full=ATP synthase F(0) complex subunit C2, mitochondrial; AltName: Full=ATP synthase lipid-binding protein; AltName: Full=ATP synthase proteolipid P2; AltName: Full=ATPase protein 9; AltName: Full=ATPase subunit c; Flags: Precursor)

HSP 1 Score: 157.918 bits (398), Expect = 2.502e-49
Identity = 78/100 (78.00%), Postives = 89/100 (89.00%), Query Frame = 0 
Query:   50 SAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFA 149
            S A   + L++ +  +R+ QTSA  +DID+AAKFIGAGAATVGVAGSGAGIG+VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLM+AFL+LFA
Sbjct:   43 SLAVVPRPLTTSLTPSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 142
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Match: gi|461593|sp|Q06056.1|AT5G2_SHEEP (RecName: Full=ATP synthase F(0) complex subunit C2, mitochondrial; AltName: Full=ATP synthase lipid-binding protein; AltName: Full=ATP synthase proteolipid P2; AltName: Full=ATPase protein 9; AltName: Full=ATPase subunit c; Flags: Precursor)

HSP 1 Score: 157.918 bits (398), Expect = 2.643e-49
Identity = 78/100 (78.00%), Postives = 89/100 (89.00%), Query Frame = 0 
Query:   50 SAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFA 149
            S A   + L++ +  +R+ QTSA  +DID+AAKFIGAGAATVGVAGSGAGIG+VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLM+AFL+LFA
Sbjct:   43 SLAVVPRPLTTSLTPSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 142
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Match: gi|543878|sp|Q06645.1|AT5G1_RAT (RecName: Full=ATP synthase F(0) complex subunit C1, mitochondrial; AltName: Full=ATP synthase lipid-binding protein; AltName: Full=ATP synthase proteolipid P1; AltName: Full=ATPase protein 9; AltName: Full=ATPase subunit c; Flags: Precursor)

HSP 1 Score: 157.532 bits (397), Expect = 2.702e-49
Identity = 84/121 (69.42%), Postives = 97/121 (80.17%), Query Frame = 0 
Query:   35 TCSRGLL-----AQWQRPAVSAAWTTQALSSPV-VSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFA 149
            +C+RGL+     +   RP  + +      SSP+ V+ R  QTS   +DID+AAKFIGAGAATVGVAGSGAGIG+VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLM+AFL+LFA
Sbjct:   16 SCTRGLIRPVSASLLSRPE-APSKKPSCCSSPLQVARREFQTSVISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Match: gi|461588|sp|P05496.2|AT5G1_HUMAN (RecName: Full=ATP synthase F(0) complex subunit C1, mitochondrial; AltName: Full=ATP synthase lipid-binding protein; AltName: Full=ATP synthase proteolipid P1; AltName: Full=ATP synthase proton-transporting mitochondrial F(0) complex subunit C1; AltName: Full=ATPase protein 9; AltName: Full=ATPase subunit c; Flags: Precursor)

HSP 1 Score: 157.147 bits (396), Expect = 4.618e-49
Identity = 88/128 (68.75%), Postives = 99/128 (77.34%), Query Frame = 0 
Query:   36 CSRGLLAQWQRPAVSAAWTTQALSSPV--------------VSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFA 149
            C+RGL+    RP VSA++    L+SPV              V+ R  QTS   +DID+AAKFIGAGAATVGVAGSGAGIG+VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLM+AFL+LFA
Sbjct:   17 CTRGLI----RP-VSASF----LNSPVNSSKQPSYSNFPLQVARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Match: gi|961376392|gb|ALS04940.1| (mitochondrial ATP synthase lipid-binding protein precursor [Pseudodiaptomus poplesia])

HSP 1 Score: 172.555 bits (436), Expect = 5.965e-53
Identity = 90/109 (82.57%), Postives = 97/109 (88.99%), Query Frame = 0 
Query:   46 RPAVSAAWTTQALSS----PVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            RPAVS A +   + +    PV++AR +QT+AA KDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:    6 RPAVSPACSRALMGNRVFRPVMAARTIQTTAASKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 114
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Match: gi|961376666|gb|ALS05077.1| (mitochondrial ATP synthase lipid-binding protein precursor [Centropages tenuiremis])

HSP 1 Score: 171.014 bits (432), Expect = 2.134e-52
Identity = 92/123 (74.80%), Postives = 98/123 (79.67%), Query Frame = 0 
Query:   28 MANFVRLTCSRGLLAQWQRPAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            +A F    CSR +LA+ Q P+               +ARALQT+A  KDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:    4 LARFAVTPCSRLMLARHQVPS---------------AARALQTTAVSKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 111
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Match: gi|961375668|gb|ALS04578.1| (mitochondrial ATP synthase lipid-binding protein precursor [Pseudodiaptomus poplesia] >gi|1148369180|gb|AQS22826.1| mitochondrial ATP synthase lipid-binding precursor [Pseudodiaptomus poplesia])

HSP 1 Score: 170.629 bits (431), Expect = 3.404e-52
Identity = 87/104 (83.65%), Postives = 92/104 (88.46%), Query Frame = 0 
Query:   47 PAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            PA S A     +  PV++AR +QT+A  KDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:   11 PACSRALMGNRVFRPVMAARTIQTTAVSKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 114
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Match: gi|961375670|gb|ALS04579.1| (mitochondrial ATP synthase lipid-binding protein precursor [Pseudodiaptomus poplesia] >gi|1148368863|gb|AQS22674.1| mitochondrial-like ATP synthase lipid-binding protein [Pseudodiaptomus poplesia])

HSP 1 Score: 170.244 bits (430), Expect = 4.191e-52
Identity = 86/104 (82.69%), Postives = 92/104 (88.46%), Query Frame = 0 
Query:   47 PAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            PA S A     +  PV++AR +QT+A  +DIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:   11 PACSRALMANRVFRPVMAARTIQTTAVTRDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 114
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Match: gi|961376950|gb|ALS05219.1| (mitochondrial ATP synthase lipid-binding protein precursor [Tortanus dextrilobatus])

HSP 1 Score: 167.933 bits (424), Expect = 3.681e-51
Identity = 92/123 (74.80%), Postives = 97/123 (78.86%), Query Frame = 0 
Query:   28 MANFVRLTCSRGLLAQWQRPAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            +A F    CSR  L + + P               ++ARALQTSAA KDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:    4 IARFALTPCSRVALIRSRAP---------------LAARALQTSAANKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 111
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Match: gi|961376034|gb|ALS04761.1| (mitochondrial ATP synthase lipid-binding protein precursor [Pseudodiaptomus poplesia])

HSP 1 Score: 167.548 bits (423), Expect = 5.680e-51
Identity = 86/104 (82.69%), Postives = 91/104 (87.50%), Query Frame = 0 
Query:   47 PAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            PA S A     +  PV++AR +QT+A  KDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFL LFAF
Sbjct:   11 PACSRALMGNRVFRPVMAARTIQTTAVSKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLPLFAF 114
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Match: gi|961376880|gb|ALS05184.1| (mitochondrial ATP synthase lipid-binding protein precursor [Paracalanus parvus])

HSP 1 Score: 165.622 bits (418), Expect = 3.290e-50
Identity = 92/123 (74.80%), Postives = 97/123 (78.86%), Query Frame = 0 
Query:   28 MANFVRLTCSRGLLAQWQRPAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            M+   RL+ S  L   W RPA     + QA S        L TS+AK+DIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:    1 MSAIARLSVSPRLAMAWMRPA-----SAQATS-------LLHTSSAKQDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 111
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Match: gi|1325328874|ref|XP_023346296.1| (ATP synthase lipid-binding protein, mitochondrial-like [Eurytemora affinis])

HSP 1 Score: 164.466 bits (415), Expect = 7.399e-50
Identity = 86/115 (74.78%), Postives = 92/115 (80.00%), Query Frame = 0 
Query:   36 CSRGLLAQWQRPAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            C R +L +   P               ++ARA+QTSA  +DIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:   12 CGRSMLTRMNVP---------------LAARAMQTSAVSRDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 111
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Match: gi|225713172|gb|ACO12432.1| (ATP synthase lipid-binding protein, mitochondrial precursor [Lepeophtheirus salmonis] >gi|225713890|gb|ACO12791.1| ATP synthase lipid-binding protein, mitochondrial precursor [Lepeophtheirus salmonis] >gi|290563012|gb|ADD38900.1| ATP synthase lipid-binding protein, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 164.851 bits (416), Expect = 7.523e-50
Identity = 93/134 (69.40%), Postives = 101/134 (75.37%), Query Frame = 0 
Query:   17 AKLLDQNPSKKMANFVRLTCSRGLLAQWQRPAVSAAWTTQALSSPVVSARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            A+L   N S+   + VR  C   L  Q        AWT        ++ARA+QTS+ K DIDSAAKFIGAGAATVGVAGSGAGIGSVFGSL+IGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:    5 ARLATSNVSRSTLSGVR--CQYALARQ-------NAWTP-------IAARAIQTSSVKSDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 122
[Close]
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Match: gi|671759261|gb|AII98039.1| (BLTX686 [Nephila pilipes])

HSP 1 Score: 165.622 bits (418), Expect = 7.868e-50
Identity = 90/108 (83.33%), Postives = 94/108 (87.04%), Query Frame = 0 
Query:   45 QRPAVSAAWTTQALSSPVVS--ARALQTSAAKKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 150
            Q+P V    T   LSS ++S   RAL TSA +KDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
Sbjct:   42 QQPKVLPRLT---LSSSLISQLPRALHTSAIQKDIDSAAKFIGAGAATVGVAGSGAGIGSVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 146
The following BLAST results are available for this feature:
BLAST of atp synthase lipid-binding mitochondrial precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000010488.033e-5469.40supercontig:LSalAtl2s:LSalAtl2s1172:43015:43503:-1... [more]
EMLSAG000000122827.329e-3676.47supercontig:LSalAtl2s:LSalAtl2s896:337982:338251:1... [more]
back to top
BLAST of atp synthase lipid-binding mitochondrial precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|12585194|sp|Q9U505.1|AT5G_MANSE2.224e-5076.85RecName: Full=ATP synthase lipid-binding protein, ... [more]
gi|461590|sp|P17605.2|AT5G1_SHEEP2.718e-5067.48RecName: Full=ATP synthase F(0) complex subunit C1... [more]
gi|461592|sp|Q06055.1|AT5G2_HUMAN3.624e-5074.55RecName: Full=ATP synthase F(0) complex subunit C2... [more]
gi|68565129|sp|Q5RAP9.1|AT5G2_PONAB7.218e-5074.55RecName: Full=ATP synthase F(0) complex subunit C2... [more]
gi|416684|sp|P32876.1|AT5G1_BOVIN1.127e-4967.50RecName: Full=ATP synthase F(0) complex subunit C1... [more]
gi|81903631|sp|Q9CR84.1|AT5G1_MOUSE2.396e-4968.33RecName: Full=ATP synthase F(0) complex subunit C1... [more]
gi|114680|sp|P07926.1|AT5G2_BOVIN2.502e-4978.00RecName: Full=ATP synthase F(0) complex subunit C2... [more]
gi|461593|sp|Q06056.1|AT5G2_SHEEP2.643e-4978.00RecName: Full=ATP synthase F(0) complex subunit C2... [more]
gi|543878|sp|Q06645.1|AT5G1_RAT2.702e-4969.42RecName: Full=ATP synthase F(0) complex subunit C1... [more]
gi|461588|sp|P05496.2|AT5G1_HUMAN4.618e-4968.75RecName: Full=ATP synthase F(0) complex subunit C1... [more]

Pages

back to top
BLAST of atp synthase lipid-binding mitochondrial precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|961376392|gb|ALS04940.1|5.965e-5382.57mitochondrial ATP synthase lipid-binding protein p... [more]
gi|961376666|gb|ALS05077.1|2.134e-5274.80mitochondrial ATP synthase lipid-binding protein p... [more]
gi|961375668|gb|ALS04578.1|3.404e-5283.65mitochondrial ATP synthase lipid-binding protein p... [more]
gi|961375670|gb|ALS04579.1|4.191e-5282.69mitochondrial ATP synthase lipid-binding protein p... [more]
gi|961376950|gb|ALS05219.1|3.681e-5174.80mitochondrial ATP synthase lipid-binding protein p... [more]
gi|961376034|gb|ALS04761.1|5.680e-5182.69mitochondrial ATP synthase lipid-binding protein p... [more]
gi|961376880|gb|ALS05184.1|3.290e-5074.80mitochondrial ATP synthase lipid-binding protein p... [more]
gi|1325328874|ref|XP_023346296.1|7.399e-5074.78ATP synthase lipid-binding protein, mitochondrial-... [more]
gi|225713172|gb|ACO12432.1|7.523e-5069.40ATP synthase lipid-binding protein, mitochondrial ... [more]
gi|671759261|gb|AII98039.1|7.868e-5083.33BLTX686 [Nephila pilipes][more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1655_size32039supercontigscaffold1655_size32039:6320..7795 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:proton-transporting two-sector ATPase complex
Note proton-transporting domain
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1655_size32039-snap-gene-0.10-mRNA-1maker-scaffold1655_size32039-snap-gene-0.10-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1655_size32039:6320..7795-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1655_size32039-snap-gene-0.10 ID=maker-scaffold1655_size32039-snap-gene-0.10|Name=atp synthase lipid-binding mitochondrial precursor|organism=Tigriopus kingsejongensis|type=gene|length=1476bp|location=Sequence derived from alignment at scaffold1655_size32039:6320..7795- (Tigriopus kingsejongensis)
CTCCATTTTGAGCGTCGTCACAACGGCGAGCTACTTCTAGGCTGGATTTC
CTTTGCAGTCGATCGAGTCTCATCTCACACTCATCACACTCTCGAGTTCA
GCGAAGCTACTTGACCAAAACCCCTCCAAGAAAATGGCCAACTTCGTCAG
ACTGACCTGTTCCCGAGGACTCCTCGCCCAATGGCAGAGACCCGCCGTCT
CGGCCGCGTGGACCACTCAGGTGAGAAGCCGCATTGAGCCGGAGTGGAGC
CCTTATTTCCATCCAGACAGAGGCATGGCGCCCTTACGGGGTGCCGATCG
CTCTGATCAGGGTTCAATAGCCGGAGCAAGGGCCCCCCAGGGAGCCAAAA
GGGTTGGCATCACCCCCTGACACGCTGTTTTGGGCCACCCACCTCGGGGG
TGGGAACCATAAGACCACCGCTATGACTACTGCGGCCTCCATTCCAAGAT
GGCGTCGGCGAATCGTCAGCTGATTGAGTGTGTTCTCTATACATGCCTCG
GTTGGCTAGGGATCCGAGGACGAACTGCAGGGTGGACCCGGGGGGTGTGG
GCGGGAATTTGGGGGACTGCTGTGAGGGTGGGGCTAGGGTGGCTTTTTTT
TCCTGGAGGATAAGAGGCTTTATTGAAGCGGGGGGCTGATTGGCAATGGT
TCTCTGGGAGCCAATCCTGATGGCTGCCCTGGCTGAGTTGCTCGGGAGGC
CAATGGTGGTTCTGCAGATCCAAGCGACTAGCATTGGAAAAGTGGCAATC
TGAATATGAAAGTTTGGGTAGACTTGGAGATGGCCAGGCAATATTCTATG
CATCACTTTGAACCCAACGACTGCTCTCGTTCAGAAGCTAAGAGGCATCC
TGGGGAGCTTGGGCCATTGAATCCATGCTTTGAATGTTCGATTTCCCATT
GCAGGCCTTGTCGAGCCCCGTGGTGAGTGCTCGTGCCCTTCAGACCTCGG
CTGCCAAGAAGGACATTGACTCCGCCGCCAAGTTCATTGGTGCTGGTGCC
GCCACCGTGGGTGTGGCCGGCTCCGGTGCCGGAATCGGCTCCGTCTTCGG
CTCCCTCATCATCGGCTACGCTCGCAACCCCTCGCTCAAGCAGCAGTTGT
TCTCGTACGCCATCTTGGGATTCGCCCTGTCCGAAGCCATGGGTCTCTTC
TGTTTGATGATGGCCTTTTTGCTCCTCTTCGCCTTCTAAGCGGCTCGAGG
GATCCGTCGTCTTCGGGCCACCCCCACCAATGGTACCGTCCACCGACATC
GGAGCGGGGCCAGGGGAGGCCATGAGGCTCGACTTCGCCCGACTATTACC
GTATAACTAAATACCGGACGATCTTTAGTGCGTAGGTCTGAGACACTATT
CAGGATGAAACTGTACGAGCAAGTCTACGAAAAAAATATGAGAATTGTTG
CTTTTAATACACGATGTAACTCAGACCCGACCGAGTGACGAGTGCAGCGG
ATTATAAGTTTAAAATAAACGATCCT
back to top
Synonyms
The feature 'atp synthase lipid-binding mitochondrial precursor' has the following synonyms
Synonym
Tk04537
Add to Basket