arginine-glutamic acid dipeptide repeats, maker-scaffold169_size292178-snap-gene-1.30 (gene) Tigriopus kingsejongensis

Overview
Namearginine-glutamic acid dipeptide repeats
Unique Namemaker-scaffold169_size292178-snap-gene-1.30
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of arginine-glutamic acid dipeptide repeats vs. L. salmonis genes
Match: EMLSAG00000000435 (supercontig:LSalAtl2s:LSalAtl2s1068:408573:412301:1 gene:EMLSAG00000000435 transcript:EMLSAT00000000435 description:"maker-LSalAtl2s1068-snap-gene-3.21")

HSP 1 Score: 285.034 bits (728), Expect = 4.246e-95
Identity = 155/281 (55.16%), Postives = 199/281 (70.82%), Query Frame = 0
Query:   33 FLQDPASDLYQCYRAKINDLRTGMKDEKKQAR------RKSRWGAVDEKTRTPGPSASSVANRSPQLVQYA--------------------MKMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            FL D  S +YQ YR K++ LR G+ +E +QA+      RK+RWG  ++K      +A +   +S +L+ YA                    +KM+ +YQ +LKKQ + +  A  GK  YEYDSDEDIEGGTWEHKAR+LEM KT T+AE LT +A G+HHIGDFLPP+EL KF++KY+A++ G   +ESDY+ NK+ +DNKGFK+LQKMGW+EG GLG+SGQGITTPI+   Q  DKKGLG+ +P  L++ DDEFDAYRKRMM+AYRFRPNPLNNPRRAYY
Sbjct:  128 FLYDTKSVMYQSYRKKVDTLRNGIMEECRQAKEGNNKKRKTRWGDENDKI-----AALAHPEKSKELLMYAVRVFGSIDLEPHQWKQCEDQIKMNIVYQDILKKQEETKKFAAQGKHKYEYDSDEDIEGGTWEHKARRLEMDKTLTEAESLTESAKGKHHIGDFLPPEELSKFMAKYQALKDGTNIEESDYINNKITEDNKGFKLLQKMGWSEGGGLGSSGQGITTPISNNGQGSDKKGLGISKPHELDKADDEFDAYRKRMMMAYRFRPNPLNNPRRAYY 403          
BLAST of arginine-glutamic acid dipeptide repeats vs. L. salmonis genes
Match: EMLSAG00000000050 (supercontig:LSalAtl2s:LSalAtl2s1009:51583:59082:1 gene:EMLSAG00000000050 transcript:EMLSAT00000000050 description:"maker-LSalAtl2s1009-snap-gene-0.25")

HSP 1 Score: 53.5286 bits (127), Expect = 2.669e-8
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0
Query:  173 PDELKKFISKY-EAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLG 247
            P++LK+   KY +AI++ ET   ++   NK+  DN G +MLQKMGW EG GLG S QG T+ I  G Q   + GLG
Sbjct:  565 PNKLKE---KYLKAIEQAETSGTNE-TPNKVGSDNIGNRMLQKMGWKEGLGLGKSNQGRTSIIEAG-QRNMQAGLG 635          
BLAST of arginine-glutamic acid dipeptide repeats vs. SwissProt
Match: gi|61216649|sp|Q8CH02.1|SUGP1_MOUSE (RecName: Full=SURP and G-patch domain-containing protein 1; AltName: Full=Splicing factor 4)

HSP 1 Score: 206.453 bits (524), Expect = 8.196e-61
Identity = 95/163 (58.28%), Postives = 122/163 (74.85%), Query Frame = 0
Query:  127 YDSDEDI--EGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            YDSDE++  E GTWEH+ R++EM KT   AE+LT    G+H IGDFLPPDEL+KF+  ++A+++G   D S+Y E KL  +N G++ML KMGW EG GLGT GQGI  P+N+G+ + D  G G+ RP  L + DDE++A+RKRMMLAYRFRPNPLNNPRR YY
Sbjct:  481 YDSDEEVDSELGTWEHQLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGTEGQGIKNPVNKGATTIDGAGFGIDRPAELSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY 643          
BLAST of arginine-glutamic acid dipeptide repeats vs. SwissProt
Match: gi|61216105|sp|Q68FU8.1|SUGP1_RAT (RecName: Full=SURP and G-patch domain-containing protein 1; AltName: Full=Splicing factor 4)

HSP 1 Score: 206.453 bits (524), Expect = 8.867e-61
Identity = 95/163 (58.28%), Postives = 122/163 (74.85%), Query Frame = 0
Query:  127 YDSDEDI--EGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            YDSDE++  E GTWEH+ R++EM KT   AE+LT    G+H IGDFLPPDEL+KF+  ++A+++G   D S+Y E KL  +N G++ML KMGW EG GLGT GQGI  P+N+G+ + D  G G+ RP  L + DDE++A+RKRMMLAYRFRPNPLNNPRR YY
Sbjct:  482 YDSDEEVDSELGTWEHQLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGTEGQGIKNPVNKGATTIDGAGFGIDRPAELSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY 644          
BLAST of arginine-glutamic acid dipeptide repeats vs. SwissProt
Match: gi|61216666|sp|Q8IWZ8.2|SUGP1_HUMAN (RecName: Full=SURP and G-patch domain-containing protein 1; AltName: Full=RNA-binding protein RBP; AltName: Full=Splicing factor 4)

HSP 1 Score: 205.682 bits (522), Expect = 2.162e-60
Identity = 94/163 (57.67%), Postives = 122/163 (74.85%), Query Frame = 0
Query:  127 YDSDEDI--EGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            YDSDE++  E GTWEH+ R++EM KT   AE+LT    G+H IGDFLPPDEL+KF+  ++A+++G   D S+Y E KL  +N G++ML KMGW EG GLG+ GQGI  P+N+G+ + D  G G+ RP  L + DDE++A+RKRMMLAYRFRPNPLNNPRR YY
Sbjct:  483 YDSDEEVDSELGTWEHQLRRMEMDKTREWAEQLTKMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFGIDRPAELSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY 645          
BLAST of arginine-glutamic acid dipeptide repeats vs. SwissProt
Match: gi|75249958|sp|Q94C11.1|SUGP1_ARATH (RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein)

HSP 1 Score: 113.62 bits (283), Expect = 1.309e-27
Identity = 55/124 (44.35%), Postives = 82/124 (66.13%), Query Frame = 0
Query:  165 HHIGDFLPPDELKKFISKY-EAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            HH+GD++P +EL KF+SK  +A  +  T + ++  + K++ DN G K+L KMGW EG G+G+S +G+  PI  G    +  G+G   P  ++  DD ++ Y+KRMML Y+ RPNPL NPR+AYY
Sbjct:  322 HHMGDYIPLEELDKFLSKCNDAAAQKATKEAAE--KAKIQADNVGHKLLSKMGWKEGEGIGSSRKGMADPIMAGDVKTNNLGVGASAPGEVKPEDDIYEQYKKRMMLGYKHRPNPLGNPRKAYY 443          
BLAST of arginine-glutamic acid dipeptide repeats vs. SwissProt
Match: gi|308153496|sp|Q8IX01.2|SUGP2_HUMAN (RecName: Full=SURP and G-patch domain-containing protein 2; AltName: Full=Arginine/serine-rich-splicing factor 14; AltName: Full=Splicing factor, arginine/serine-rich 14)

HSP 1 Score: 78.5666 bits (192), Expect = 4.441e-15
Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0
Query:  196 DYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFR 275
            D+ + KL D N GF+MLQKMGW EG GLG+ G+GI  P++ G+ S + +GLG    D  E  +D FD +R+RMM  YR +
Sbjct: 1003 DFAQQKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPS-EGEGLGA---DGQEHKEDTFDVFRQRMMQMYRHK 1078          
BLAST of arginine-glutamic acid dipeptide repeats vs. SwissProt
Match: gi|61216800|sp|Q8CH09.2|SUGP2_MOUSE (RecName: Full=SURP and G-patch domain-containing protein 2; AltName: Full=Arginine/serine-rich-splicing factor 14; AltName: Full=Splicing factor, arginine/serine-rich 14)

HSP 1 Score: 77.411 bits (189), Expect = 1.314e-14
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query:  196 DYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFR 275
            ++ + KL D N GF+MLQKMGW EG GLG+ G+GI  P++ G+ S + +GLG    D  E+ +D FD +R+RMM  YR +
Sbjct:  988 EFSQQKLTDKNVGFQMLQKMGWKEGHGLGSLGKGIREPVSVGALS-EGEGLGA---DGPEQKEDTFDVFRQRMMQMYRHK 1063          
BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Match: gi|1228364071|ref|XP_021968667.1| (SURP and G-patch domain-containing protein 1-like isoform X2 [Folsomia candida])

HSP 1 Score: 261.922 bits (668), Expect = 2.176e-79
Identity = 128/229 (55.90%), Postives = 159/229 (69.43%), Query Frame = 0
Query:   79 PGPSASSVANRSPQLVQYA--------------------MKMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            PG S S +   +PQL+ YA                     KM+ ++Q + +K+A  E +A++GK  +EYDSDE+ EGGTWEHK R  EM+KT   A+ELT +AHG+HHIGDFLPPDEL KF+ KY+A+++G+  DES+Y E KL+ DN GFKMLQKMGW+ G GLG   QGI  PI++G    DK GLGV +P  L E DDE+ AYRKRMMLAYRFRPNPLNNPRRAYY
Sbjct:  413 PGASISKITRTNPQLLAYARQAYGRIDLDDDEWKQCIDAYKMNMVFQDIARKKANDEELARAGKFKHEYDSDEETEGGTWEHKVRMKEMEKTRDWAQELTQSAHGKHHIGDFLPPDELAKFMEKYKAVKEGKQLDESEYQEYKLQQDNIGFKMLQKMGWSSGEGLGAENQGILAPIDKGKVPSDKMGLGVEKPGDLNEEDDEYTAYRKRMMLAYRFRPNPLNNPRRAYY 641          
BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Match: gi|1233206687|ref|XP_022202529.1| (SURP and G-patch domain-containing protein 1-like [Nilaparvata lugens])

HSP 1 Score: 247.669 bits (631), Expect = 7.658e-79
Identity = 120/228 (52.63%), Postives = 157/228 (68.86%), Query Frame = 0
Query:   80 GPSASSVANRSPQLVQYAM--------------------KMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            G   S V+   P L+QYAM                    K++ +YQ +++K+ + + +  SG+  YEYDSDE+ +GGTWEH+ R+ EM+ T   AE+LT+AA G+HHIGDFLPP+EL +F+ KYEA+++G   D SDY E KLK+DN GF+MLQK+GW EG GLG+ G GI  P+N+    GD +GLG+ RPD +   DDE+DAYRKRMMLAYRFRPNPLNNPRR YY
Sbjct:    3 GAMISRVSRTDPALLQYAMHNFGTTQLSEEDWKKAEDHFKINLLYQDMMRKRDELQRLQASGRNKYEYDSDEETDGGTWEHRLREKEMEATQLWAEQLTAAASGKHHIGDFLPPEELAQFMEKYEALKQGRPPDLSDYKEYKLKEDNIGFQMLQKLGWTEGQGLGSEGTGILDPVNKAMSRGDNQGLGLERPDDVNVDDDEYDAYRKRMMLAYRFRPNPLNNPRRPYY 230          
BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Match: gi|1241834144|gb|PBC30451.1| (Splicing factor [Apis cerana cerana])

HSP 1 Score: 252.677 bits (644), Expect = 1.229e-78
Identity = 124/234 (52.99%), Postives = 155/234 (66.24%), Query Frame = 0
Query:   74 EKTRTPGPSASSVANRSPQLVQYA--------------------MKMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            ++T T  P  + ++   P L+QYA                     K++ +YQ LL+K+ +   +   GK  YEYDSDE+ EGGTWEHK R  EM+ T   AEELT+ A G+HHIGDFLPPDELKKF+ +Y A+++G+  D SDY E KLK+DN GF+MLQK+GW+EG GLG+ G G   PIN+ +   D  GLG  RPD +   DDEFDAYRKRMMLAYRFRPNPLNNPRR YY
Sbjct:  154 QRTETKNPMLTKISRNDPALIQYARQTFGTLDLTEEQWKKAEDHYKINLLYQNLLRKREEVRRLEAQGKHKYEYDSDEETEGGTWEHKLRSAEMEATQMWAEELTAQAEGKHHIGDFLPPDELKKFMEQYNAVKQGKEPDLSDYKEYKLKEDNIGFQMLQKLGWSEGQGLGSEGNGRIEPINKATNRFDSAGLGSERPDGVSRDDDEFDAYRKRMMLAYRFRPNPLNNPRRPYY 387          
BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Match: gi|1228364069|ref|XP_021968666.1| (SURP and G-patch domain-containing protein 1-like isoform X1 [Folsomia candida])

HSP 1 Score: 262.307 bits (669), Expect = 1.909e-78
Identity = 128/229 (55.90%), Postives = 159/229 (69.43%), Query Frame = 0
Query:   79 PGPSASSVANRSPQLVQYA--------------------MKMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            PG S S +   +PQL+ YA                     KM+ ++Q + +K+A  E +A++GK  +EYDSDE+ EGGTWEHK R  EM+KT   A+ELT +AHG+HHIGDFLPPDEL KF+ KY+A+++G+  DES+Y E KL+ DN GFKMLQKMGW+ G GLG   QGI  PI++G    DK GLGV +P  L E DDE+ AYRKRMMLAYRFRPNPLNNPRRAYY
Sbjct:  531 PGASISKITRTNPQLLAYARQAYGRIDLDDDEWKQCIDAYKMNMVFQDIARKKANDEELARAGKFKHEYDSDEETEGGTWEHKVRMKEMEKTRDWAQELTQSAHGKHHIGDFLPPDELAKFMEKYKAVKEGKQLDESEYQEYKLQQDNIGFKMLQKMGWSSGEGLGAENQGILAPIDKGKVPSDKMGLGVEKPGDLNEEDDEYTAYRKRMMLAYRFRPNPLNNPRRAYY 759          
BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Match: gi|1330874772|gb|PNF14630.1| (hypothetical protein B7P43_G12016 [Cryptotermes secundus])

HSP 1 Score: 246.128 bits (627), Expect = 2.260e-78
Identity = 113/191 (59.16%), Postives = 146/191 (76.44%), Query Frame = 0
Query:   97 AMKMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
             ++++ +YQ +L+K+ + E + ++GK  YEYDSDE+ +GGTWEH+ R  EM+ T   AEELT  A G+HHIGDFLPPDEL++F+ KY A+++G   D SDY E KLK+DN GF+MLQK+GW EG GLG+ G GI  P+N+ S   + +GLGV RPD +  GDDE+DAYRKRMMLAYRFRPNPLNNPRR YY
Sbjct:   21 CVQINLLYQDMLRKRQELERLQRAGKFKYEYDSDEETDGGTWEHRLRLQEMEATQRWAEELTEKAKGKHHIGDFLPPDELERFLEKYNALKEGREPDLSDYKEFKLKEDNIGFQMLQKLGWTEGQGLGSEGHGIVDPVNKASSRPENQGLGVERPDDVSHGDDEYDAYRKRMMLAYRFRPNPLNNPRRPYY 211          
BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Match: gi|1215278731|gb|OXA65040.1| (SURP and G-patch domain-containing protein 1 [Folsomia candida])

HSP 1 Score: 262.307 bits (669), Expect = 2.906e-78
Identity = 128/229 (55.90%), Postives = 159/229 (69.43%), Query Frame = 0
Query:   79 PGPSASSVANRSPQLVQYA--------------------MKMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            PG S S +   +PQL+ YA                     KM+ ++Q + +K+A  E +A++GK  +EYDSDE+ EGGTWEHK R  EM+KT   A+ELT +AHG+HHIGDFLPPDEL KF+ KY+A+++G+  DES+Y E KL+ DN GFKMLQKMGW+ G GLG   QGI  PI++G    DK GLGV +P  L E DDE+ AYRKRMMLAYRFRPNPLNNPRRAYY
Sbjct:  567 PGASISKITRTNPQLLAYARQAYGRIDLDDDEWKQCIDAYKMNMVFQDIARKKANDEELARAGKFKHEYDSDEETEGGTWEHKVRMKEMEKTRDWAQELTQSAHGKHHIGDFLPPDELAKFMEKYKAVKEGKQLDESEYQEYKLQQDNIGFKMLQKMGWSSGEGLGAENQGILAPIDKGKVPSDKMGLGVEKPGDLNEEDDEYTAYRKRMMLAYRFRPNPLNNPRRAYY 795          
BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Match: gi|915656345|gb|KOC59983.1| (SURP and G-patch domain-containing protein 1 [Habropoda laboriosa])

HSP 1 Score: 257.299 bits (656), Expect = 8.762e-78
Identity = 126/240 (52.50%), Postives = 157/240 (65.42%), Query Frame = 0
Query:   68 RWGAVDEKTRTPGPSASSVANRSPQLVQYA--------------------MKMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            R   V ++T T  P  + ++   P L+QYA                     K++ +YQ LL+K+ +   +   GK  YEYDSDE+ EGGTWEHK R  EM+ T   AEELT+ A G+HHIGDFLPPDELKKF+ +Y A+++G+  D SDY E KLK+DN GF+MLQK+GW+EG GLG+ G G   PIN+ +   D  GLG  RPD +   DDEFDAYRKRMMLAYRFRPNPLNNPRR YY
Sbjct:  390 RSAKVQQRTETKNPMLTKISRNDPALIQYARQTFGTLDLTEEQWKKAEDHYKINLLYQNLLRKREEVRRLEAQGKHKYEYDSDEETEGGTWEHKLRSAEMEATQMWAEELTAQAEGKHHIGDFLPPDELKKFMEQYNAVKQGKEPDLSDYKEYKLKEDNIGFQMLQKLGWSEGQGLGSEGNGRIEPINKATNRFDSAGLGSERPDGVSRDDDEFDAYRKRMMLAYRFRPNPLNNPRRPYY 629          
BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Match: gi|1229903714|ref|XP_022172680.1| (uncharacterized protein LOC111035390 isoform X1 [Myzus persicae] >gi|1229903716|ref|XP_022172681.1| uncharacterized protein LOC111035390 isoform X1 [Myzus persicae] >gi|1229903718|ref|XP_022172682.1| uncharacterized protein LOC111035390 isoform X1 [Myzus persicae])

HSP 1 Score: 257.299 bits (656), Expect = 4.244e-77
Identity = 127/228 (55.70%), Postives = 153/228 (67.11%), Query Frame = 0
Query:   80 GPSASSVANRSPQLVQYAM--------------------KMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            GP  S V    P L+QYAM                    K++ +YQ +LKK+ + E + ++GK  YEYDSDED EGGTWEHK RK EM  T   AEELT  +  +HHIGDFLPPDEL +F+ KY A+++    D SDY E KLK+DN GF+MLQK+GW+EG GLG+SG GI  P+N+G    +  GLGV RP  L + DDEFDAYRKRMMLAYRFRPNPLNNPRR YY
Sbjct:  463 GPMISQVGRNDPALMQYAMQSFGTINLSEEDWKKAEDHYKINLLYQDMLKKRQQLESLQRAGKFKYEYDSDEDTEGGTWEHKLRKEEMVATERWAEELTEKSKDKHHIGDFLPPDELARFMEKYSALREDREPDLSDYKEFKLKEDNIGFQMLQKLGWSEGQGLGSSGTGIVEPVNKGGSHNENHGLGVERPSELRQNDDEFDAYRKRMMLAYRFRPNPLNNPRRPYY 690          
BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Match: gi|1229903720|ref|XP_022172683.1| (SURP and G-patch domain-containing protein 1-like isoform X2 [Myzus persicae])

HSP 1 Score: 256.914 bits (655), Expect = 4.523e-77
Identity = 127/228 (55.70%), Postives = 153/228 (67.11%), Query Frame = 0
Query:   80 GPSASSVANRSPQLVQYAM--------------------KMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            GP  S V    P L+QYAM                    K++ +YQ +LKK+ + E + ++GK  YEYDSDED EGGTWEHK RK EM  T   AEELT  +  +HHIGDFLPPDEL +F+ KY A+++    D SDY E KLK+DN GF+MLQK+GW+EG GLG+SG GI  P+N+G    +  GLGV RP  L + DDEFDAYRKRMMLAYRFRPNPLNNPRR YY
Sbjct:  454 GPMISQVGRNDPALMQYAMQSFGTINLSEEDWKKAEDHYKINLLYQDMLKKRQQLESLQRAGKFKYEYDSDEDTEGGTWEHKLRKEEMVATERWAEELTEKSKDKHHIGDFLPPDELARFMEKYSALREDREPDLSDYKEFKLKEDNIGFQMLQKLGWSEGQGLGSSGTGIVEPVNKGGSHNENHGLGVERPSELRQNDDEFDAYRKRMMLAYRFRPNPLNNPRRPYY 681          
BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Match: gi|985409177|ref|XP_015369973.1| (PREDICTED: SURP and G-patch domain-containing protein 1-like [Diuraphis noxia] >gi|985409179|ref|XP_015369974.1| PREDICTED: SURP and G-patch domain-containing protein 1-like [Diuraphis noxia] >gi|985409181|ref|XP_015369975.1| PREDICTED: SURP and G-patch domain-containing protein 1-like [Diuraphis noxia])

HSP 1 Score: 256.529 bits (654), Expect = 6.047e-77
Identity = 126/228 (55.26%), Postives = 152/228 (66.67%), Query Frame = 0
Query:   80 GPSASSVANRSPQLVQYAM--------------------KMSGIYQALLKKQAKKEVMAQSGKRPYEYDSDEDIEGGTWEHKARKLEMQKTSTKAEELTSAAHGRHHIGDFLPPDELKKFISKYEAIQKGETFDESDYLENKLKDDNKGFKMLQKMGWNEGTGLGTSGQGITTPINQGSQSGDKKGLGVVRPDSLEEGDDEFDAYRKRMMLAYRFRPNPLNNPRRAYY 287
            GP  S V    P L+QYAM                    K++ +YQ +LKK+ + E + ++GK  YEYDSDED EGGTWEHK RK EM  T   AEELT  +  +HHIGDFLPPDEL +F+ KY A+++    D SDY E KLK+DN GF+MLQK+GW+EG GLG+SG GI  P+N+G    +  GLGV RP  L + DDEFDAYRKRMML YRFRPNPLNNPRR YY
Sbjct:  459 GPMISQVGRNDPALIQYAMQSFGTINLSEEDWKKAEDHYKINLLYQDMLKKRQQLESLQKAGKFKYEYDSDEDTEGGTWEHKLRKEEMVATERWAEELTEKSKDKHHIGDFLPPDELARFMEKYSALREDREPDLSDYKEFKLKEDNIGFQMLQKLGWSEGQGLGSSGTGIVEPVNKGGSHNENHGLGVERPSELRQNDDEFDAYRKRMMLXYRFRPNPLNNPRRPYY 686          
The following BLAST results are available for this feature:
BLAST of arginine-glutamic acid dipeptide repeats vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000004354.246e-9555.16supercontig:LSalAtl2s:LSalAtl2s1068:408573:412301:... [more]
EMLSAG000000000502.669e-847.37supercontig:LSalAtl2s:LSalAtl2s1009:51583:59082:1 ... [more]
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BLAST of arginine-glutamic acid dipeptide repeats vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
gi|61216649|sp|Q8CH02.1|SUGP1_MOUSE8.196e-6158.28RecName: Full=SURP and G-patch domain-containing p... [more]
gi|61216105|sp|Q68FU8.1|SUGP1_RAT8.867e-6158.28RecName: Full=SURP and G-patch domain-containing p... [more]
gi|61216666|sp|Q8IWZ8.2|SUGP1_HUMAN2.162e-6057.67RecName: Full=SURP and G-patch domain-containing p... [more]
gi|75249958|sp|Q94C11.1|SUGP1_ARATH1.309e-2744.35RecName: Full=SURP and G-patch domain-containing p... [more]
gi|308153496|sp|Q8IX01.2|SUGP2_HUMAN4.441e-1548.75RecName: Full=SURP and G-patch domain-containing p... [more]
gi|61216800|sp|Q8CH09.2|SUGP2_MOUSE1.314e-1447.50RecName: Full=SURP and G-patch domain-containing p... [more]
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BLAST of arginine-glutamic acid dipeptide repeats vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1228364071|ref|XP_021968667.1|2.176e-7955.90SURP and G-patch domain-containing protein 1-like ... [more]
gi|1233206687|ref|XP_022202529.1|7.658e-7952.63SURP and G-patch domain-containing protein 1-like ... [more]
gi|1241834144|gb|PBC30451.1|1.229e-7852.99Splicing factor [Apis cerana cerana][more]
gi|1228364069|ref|XP_021968666.1|1.909e-7855.90SURP and G-patch domain-containing protein 1-like ... [more]
gi|1330874772|gb|PNF14630.1|2.260e-7859.16hypothetical protein B7P43_G12016 [Cryptotermes se... [more]
gi|1215278731|gb|OXA65040.1|2.906e-7855.90SURP and G-patch domain-containing protein 1 [Fols... [more]
gi|915656345|gb|KOC59983.1|8.762e-7852.50SURP and G-patch domain-containing protein 1 [Habr... [more]
gi|1229903714|ref|XP_022172680.1|4.244e-7755.70uncharacterized protein LOC111035390 isoform X1 [M... [more]
gi|1229903720|ref|XP_022172683.1|4.523e-7755.70SURP and G-patch domain-containing protein 1-like ... [more]
gi|985409177|ref|XP_015369973.1|6.047e-7755.26PREDICTED: SURP and G-patch domain-containing prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold169_size292178supercontigscaffold169_size292178:137005..138601 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold169_size292178-snap-gene-1.30-mRNA-1maker-scaffold169_size292178-snap-gene-1.30-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold169_size292178:137005..138601+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold169_size292178-snap-gene-1.30 ID=maker-scaffold169_size292178-snap-gene-1.30|Name=arginine-glutamic acid dipeptide repeats|organism=Tigriopus kingsejongensis|type=gene|length=1597bp|location=Sequence derived from alignment at scaffold169_size292178:137005..138601+ (Tigriopus kingsejongensis)
GGAGCTCTTGTAAGGCCGAGATCGGGGCCTGAATGGCGATTCATGGCCCG TCCATGCACCTTTGCTCAACTCGACGTTGCTTCTTCCGTGTGTGGCCTGC TCCGCCTAGACATGACCTCTCCAATGTTTGTTCACAGGTTCTTGCAAGAT CCCGCCTCCGATCTCTACCAATGCTATCGAGCCAAAATCAATGACCTCCG CACAGGGATGAAGGACGAGAAGAAGCAAGGTAAAGCGAGGCTTGGCACAC GAATGCTCTCTGTAATGGTTCCTTGATGGAGACTTCCTCCCTCGCAGCCC GGAGAAAGAGTCGCTGGGGTGCCGTGGACGAAAAGACCCGAACTCCTGGT CCCTCAGCGAGCAGTGTGGCCAATCGGAGTCCTCAGCTGGTCCAATATGC CATGAAGGTATTCGGCACTTCCGATCTGGAAACCCATCAGTGGAAGCAAT GTGAAGACCAAATGAAGGCAAGTCCGCTCTGACGGATCACCGTGTGGCCC CAAAACAGCGTGATGATAACCATCCTTGCACTGAGACATTCAAGAACTTG TTCTTGGGATGTCAAATGTGGAAAATCTAGGCTTTCACTGATTATTGGTT CACACTGGGACCAAGGTTGAAACCAACGCGCGATCTCGAATCTCTCTGCC TCCCTTTCAGATGAGTGGCATCTACCAAGCATTGTTGAAGAAACAAGCTA AAAAGGAGGTGATGGCTCAAAGCGGGAAGCGCCCGTACGAATACGATTCG GACGAGGACATAGAGGTATGAGGAGTTTCTAGAGTGGCCACTCAATATGT CCTCATCTTTCTGCTCAATTTGTGTAGGGCGGCACCTGGGAGCACAAAGC CAGGAAGCTGGAAATGCAAAAGACTTCCACCAAAGCCGAGGAGCTGACGA GTGCGGCTCATGGGCGTCATCATATAGGCGATTTTCTACCGCCCGACGAG CTCAAAAAGTTCATCTCGAAGGTGCGTGCTTGTAACTCTTTGCTCGGGCA CACTGATGGCATTCCCAAGTGGATTCTTCTAGTACGAGGCCATACAAAAA GGGGAAACCTTCGACGAGTCCGACTACCTGGAGAACAAACTCAAGGATGA CAACAAAGGATTCAAAATGCTACAAAAGATGGGCTGGAATGAAGGCACGG GATTGGGAACCAGTGGCCAGGGCATCACTACACCCATCAATCAGTGAGTG ATGCAAGTGGTAATGGGTTGCCTCGTGGCTGACTTAACAATCCGAATGCA CTATTCCAGGGGCAGTCAGAGTGGCGACAAGAAAGGCCTGGGAGTGGTGC GACCCGATTCCCTCGAGGAGGGGGACGACGAGTTCGATGCCTACCGCAAG CGAATGATGCTAGCCTATCGCTTTAGGCCCAATCCTTTGGTGAGTGTCAA TGTGGGTGGACCATGGTTCGGGCCGAGGCAAGATATGTTTTCCTATATTT CAGAACAATCCGAGGCGAGCATACTATTAATCACCGTCGGCACACCCAGA CAGATATTATATGCACCATCATATTTGACGTGGCCAGTGCCCATCGTTCG TGTAATAAACTTCTCATTTTGCATTGACAGGGCTGATAAGTAGAGGA
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Synonyms
The feature 'arginine-glutamic acid dipeptide repeats' has the following synonyms
Synonym
Tk07934
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