ap-1 complex subunit sigma-2, maker-scaffold185_size275389-snap-gene-1.35 (gene) Tigriopus kingsejongensis

Overview


Name	ap-1 complex subunit sigma-2
Unique Name	maker-scaffold185_size275389-snap-gene-1.35
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of ap-1 complex subunit sigma-2 vs. L. salmonis genes
Match: EMLSAG00000007257 (supercontig:LSalAtl2s:LSalAtl2s408:42626:44752:1 gene:EMLSAG00000007257 transcript:EMLSAT00000007257 description:"maker-LSalAtl2s408-augustus-gene-0.13")

HSP 1 Score: 288.886 bits (738), Expect = 1.028e-101
Identity = 138/156 (88.46%), Postives = 151/156 (96.79%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            IQ+MLLFSRQGKLRLQK+FTAQ+E+SKKK+SR+LI  IL RKPKMSSFLEW+DLKIVYKRYASLYFCCA+E+ DNEL+VLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGE+QETSKKNVLKAI+AQD LQEEETPQGFFED+GLG
Sbjct:    2 IQYMLLFSRQGKLRLQKYFTAQSEKSKKKLSRELINNILSRKPKMSSFLEWKDLKIVYKRYASLYFCCAIEEEDNELVVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEIQETSKKNVLKAISAQDCLQEEETPQGFFEDSGLG 157

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BLAST of ap-1 complex subunit sigma-2 vs. L. salmonis genes
Match: EMLSAG00000001508 (supercontig:LSalAtl2s:LSalAtl2s125:280180:281536:1 gene:EMLSAG00000001508 transcript:EMLSAT00000001508 description:"maker-LSalAtl2s125-augustus-gene-2.13")

HSP 1 Score: 219.164 bits (557), Expect = 2.783e-74
Identity = 104/155 (67.10%), Postives = 128/155 (82.58%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGL 182
            I F+LLFSRQGK+RLQKWF A+T++ KKK++R+L + I+ RKPKMS+FLEW D  IVYKRYASL+FC A+++ DNEL+ LEIIHRYVE+LDKYFGSVCELDIIFNFE+AYF+LDEL+L G+VQETSKK +LK I   D  QE+E      +D GL
Sbjct:    2 IHFILLFSRQGKIRLQKWFEARTDKEKKKITRELTSIIIARKPKMSNFLEWHDKVIVYKRYASLFFCFAIDRNDNELLTLEIIHRYVEVLDKYFGSVCELDIIFNFERAYFILDELILAGDVQETSKKAILKQIEYADNYQEDEIISLALKDVGL 156

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BLAST of ap-1 complex subunit sigma-2 vs. L. salmonis genes
Match: EMLSAG00000009173 (supercontig:LSalAtl2s:LSalAtl2s57:41205:42872:1 gene:EMLSAG00000009173 transcript:EMLSAT00000009173 description:"maker-LSalAtl2s57-augustus-gene-0.2")

HSP 1 Score: 172.555 bits (436), Expect = 1.083e-55
Identity = 83/149 (55.70%), Postives = 114/149 (76.51%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTA---QTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQ--CDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEE 171
            I  + LFSRQGK+RL K++ A   ++E+ K K+ +++I+ IL R   MS F+EWRD  IVYKRYASLYF   V++   DNELI+LE+IHRYVE+LD+YFG+VCELDII+NFEKA+F+LDE+++ GE+ E S+K V+K +   D  QE+E
Sbjct:    2 IHLVTLFSRQGKVRLCKFYNANLAKSEKDKTKIIKEMISNILSRTASMSCFIEWRDHTIVYKRYASLYFLFVVDKYGVDNELIILELIHRYVEVLDQYFGAVCELDIIYNFEKAHFLLDEMIMSGEIMEPSRKAVVKYVHFSDQFQEDE 150

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BLAST of ap-1 complex subunit sigma-2 vs. L. salmonis genes
Match: EMLSAG00000006382 (supercontig:LSalAtl2s:LSalAtl2s34:495818:496246:-1 gene:EMLSAG00000006382 transcript:EMLSAT00000006382 description:"augustus_masked-LSalAtl2s34-processed-gene-5.1")

HSP 1 Score: 137.117 bits (344), Expect = 4.228e-42
Identity = 64/141 (45.39%), Postives = 98/141 (69.50%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQ 168
            I+F+++ +R GK RL KW+    +  K+K+  ++ A + VR  K ++F+E+R  KIVY+RYA LYFC  V+  DN L  LE IH +VE+L++YF +VCELD++FNF K Y ++DE+ L GE++ETS+  VLK +   + L+
Sbjct:    2 IKFVMIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHACVTVRDAKHTNFVEFRHYKIVYRRYAGLYFCICVDVNDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLTMLNSLE 142

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BLAST of ap-1 complex subunit sigma-2 vs. L. salmonis genes
Match: EMLSAG00000001262 (supercontig:LSalAtl2s:LSalAtl2s1206:25785:30904:1 gene:EMLSAG00000001262 transcript:EMLSAT00000001262 description:"maker-LSalAtl2s1206-augustus-gene-0.19")

HSP 1 Score: 106.301 bits (264), Expect = 1.623e-29
Identity = 55/151 (36.42%), Postives = 97/151 (64.24%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEW------RDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEET 172
            I+ +L+F+ +GK R+ K++   TE  ++++ ++    +  R   + +FLE        D K++Y+ YA+LYF   V+  ++EL +L++I  +VE LDK F +VCELD+IF+ +K +F+L+EL++GG V ET+   +L+ I  Q  L++EE 
Sbjct:    2 IRAILVFNNRGKPRVNKFYEYYTETDQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDFKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHFILNELVMGGMVLETNMTEILQRIEEQSKLEKEEA 152

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BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Match: gi|3023308|sp|P56377.1|AP1S2_HUMAN (RecName: Full=AP-1 complex subunit sigma-2; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1B; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1B; AltName: Full=Clathrin assembly protein complex 1 sigma-1B small chain; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1B subunit; AltName: Full=Sigma 1B subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1B; AltName: Full=Sigma1B-adaptin)

HSP 1 Score: 251.136 bits (640), Expect = 1.929e-85
Identity = 122/156 (78.21%), Postives = 136/156 (87.18%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEE-ETPQGFFEDAGL 182
            +QFMLLFSRQGKLRLQKW+   +++ KKK++R+L+  +L RKPKM SFLEWRDLKIVYKRYASLYFCCA+E  DNELI LEIIHRYVELLDKYFGSVCELDIIFNFEKAYF+LDE LLGGEVQETSKKNVLKAI   DLLQEE ETP+   E+ GL
Sbjct:    1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGL 156

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BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Match: gi|21541960|sp|Q9DB50.1|AP1S2_MOUSE (RecName: Full=AP-1 complex subunit sigma-2; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1B; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1B; AltName: Full=Clathrin assembly protein complex 1 sigma-1B small chain; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1B subunit; AltName: Full=Sigma 1B subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1B; AltName: Full=Sigma1B-adaptin >gi|122140822|sp|Q3ZBS3.1|AP1S2_BOVIN RecName: Full=AP-1 complex subunit sigma-2; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1B; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1B; AltName: Full=Clathrin assembly protein complex 1 sigma-1B small chain; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1B subunit; AltName: Full=Sigma 1B subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1B; AltName: Full=Sigma1B-adaptin)

HSP 1 Score: 248.825 bits (634), Expect = 1.788e-84
Identity = 121/159 (76.10%), Postives = 136/159 (85.53%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEE----ETPQGFFEDAGL 182
            +QFMLLFSRQGKLRLQKW+   +++ KKK++R+L+  +L RKPKM SFLEWRDLKIVYKRYASLYFCCA+E  DNELI LEIIHRYVELLDKYFGSVCELDIIFNFEKAYF+LDE LLGGEVQETSKKNVLKAI   DLLQE+    ETP+   E+ GL
Sbjct:    1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEDAKEAETPRSVLEEIGL 159

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BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Match: gi|48428719|sp|P61966.1|AP1S1_HUMAN (RecName: Full=AP-1 complex subunit sigma-1A; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1A; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1A; AltName: Full=Clathrin assembly protein complex 1 sigma-1A small chain; AltName: Full=Clathrin coat assembly protein AP19; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1A subunit; AltName: Full=HA1 19 kDa subunit; AltName: Full=Sigma 1a subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1A; AltName: Full=Sigma1A-adaptin >gi|48428720|sp|P61967.1|AP1S1_MOUSE RecName: Full=AP-1 complex subunit sigma-1A; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1A; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1A; AltName: Full=Clathrin assembly protein complex 1 sigma-1A small chain; AltName: Full=Clathrin coat assembly protein AP19; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1A subunit; AltName: Full=HA1 19 kDa subunit; AltName: Full=Sigma 1a subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1A; AltName: Full=Sigma1A-adaptin)

HSP 1 Score: 241.506 bits (615), Expect = 1.490e-81
Identity = 115/157 (73.25%), Postives = 136/157 (86.62%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEE-ETPQGFFEDAGLG 183
            ++FMLLFSRQGKLRLQKW+ A +++ +KKM R+L+  +L RKPKM SFLEWRDLK+VYKRYASLYFCCA+E  DNELI LE+IHRYVELLDKYFGSVCELDIIFNFEKAYF+LDE L+GG+VQ+TSKK+VLKAI   DLLQEE E+P+   E+ GL 
Sbjct:    2 MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA 158

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BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Match: gi|122134020|sp|Q1JQ98.1|AP1S1_BOVIN (RecName: Full=AP-1 complex subunit sigma-1A; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1A; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1A; AltName: Full=Clathrin assembly protein complex 1 sigma-1A small chain; AltName: Full=Clathrin coat assembly protein AP19; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1A subunit; AltName: Full=HA1 19 kDa subunit; AltName: Full=Sigma 1a subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1A; AltName: Full=Sigma1A-adaptin)

HSP 1 Score: 241.121 bits (614), Expect = 1.875e-81
Identity = 115/157 (73.25%), Postives = 136/157 (86.62%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEE-ETPQGFFEDAGLG 183
            ++FMLLFSRQGKLRLQKW+ A +++ +KKM R+L+  +L RKPKM SFLEWRDLK+VYKRYASLYFCCA+E  DNELI LE+IHRYVELLDKYFGSVCELDIIFNFEKAYF+LDE L+GG+VQ+TSKK+VLKAI   DLLQEE E+P+   E+ GL 
Sbjct:    1 MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA 157

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BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Match: gi|81912002|sp|Q7TN05.1|AP1S3_MOUSE (RecName: Full=AP-1 complex subunit sigma-3; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1C; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1C; AltName: Full=Clathrin assembly protein complex 1 sigma-1C small chain; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1C subunit; AltName: Full=Sigma 1C subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1C; AltName: Full=Sigma1C-adaptin)

HSP 1 Score: 216.083 bits (549), Expect = 1.326e-71
Identity = 97/142 (68.31%), Postives = 122/142 (85.92%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQE 169
            I F+LLFSRQGKLRLQKW+T   ++ +KK++RD+I  +L R  + SSF++W++LK+VYKRYASLYFCCA+E  DNEL+ LEI+HRYVELLDKYFG+VCELDIIFNFEKAYF+LDE ++GGE+QETSKK  +KAI   D+LQE
Sbjct:    2 IHFILLFSRQGKLRLQKWYTTLPDKERKKITRDIIQTVLSRGHRTSSFIDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKTAVKAIEDSDMLQE 143

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BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Match: gi|21541959|sp|Q96PC3.1|AP1S3_HUMAN (RecName: Full=AP-1 complex subunit sigma-3; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1C; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1C; AltName: Full=Clathrin assembly protein complex 1 sigma-1C small chain; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1C subunit; AltName: Full=Sigma 1C subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1C; AltName: Full=Sigma1C-adaptin)

HSP 1 Score: 209.92 bits (533), Expect = 3.602e-69
Identity = 96/145 (66.21%), Postives = 122/145 (84.14%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEET 172
            I F+LLFSRQGKLRLQKW+    ++ +KK++R+++  IL R  + SSF++W++LK+VYKRYASLYFCCA+E  DNEL+ LEI+HRYVELLDKYFG+VCELDIIFNFEKAYF+LDE ++GGE+QETSKK  +KAI   D+LQE  T
Sbjct:    2 IHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKIAVKAIEDSDMLQEVST 146

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BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Match: gi|75272482|sp|Q8LEZ8.1|AP1S1_ARATH (RecName: Full=AP-1 complex subunit sigma-1; AltName: Full=Adaptor AP-1 19 kDa protein; AltName: Full=Adaptor protein complex AP-1 sigma-1 subunit; AltName: Full=Adaptor-related protein complex 1 sigma-1 subunit; AltName: Full=Clathrin assembly protein complex 1 sigma-1 small chain; AltName: Full=Clathrin assembly small subunit protein AP19-1; Short=AtAP19-1; AltName: Full=Sigma 1 subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1; AltName: Full=Sigma1-adaptin)

HSP 1 Score: 191.045 bits (484), Expect = 1.300e-61
Identity = 88/142 (61.97%), Postives = 114/142 (80.28%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQE 169
            I F+LL SRQGK+RL KW++  T++ + K+ R+L   IL R PK+ +F+EWR  K+VYKRYASLYFC  +++ DNEL VLEIIH YVE+LD+YFGSVCELD+IFNF KAY++LDELL+ GE+QE+SKK V + I+AQD L E
Sbjct:    2 IHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYKRYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARIISAQDQLVE 143

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BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Match: gi|75097963|sp|O23685.1|AP1S2_ARATH (RecName: Full=AP-1 complex subunit sigma-2; AltName: Full=Adaptor AP-1 19 kDa protein; AltName: Full=Adaptor protein complex AP-1 sigma-2 subunit; AltName: Full=Adaptor-related protein complex 1 sigma-2 subunit; AltName: Full=Clathrin assembly protein complex 1 sigma-2 small chain; AltName: Full=Clathrin assembly small subunit protein AP19-2; Short=AtAP19-2; AltName: Full=Sigma 2 subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 2; AltName: Full=Sigma2-adaptin)

HSP 1 Score: 188.734 bits (478), Expect = 1.290e-60
Identity = 88/142 (61.97%), Postives = 113/142 (79.58%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQE 169
            I F+LL SRQGK+RL KW++   ++ + K+ R+L   IL R PK+ +F+EWR  K+VYKRYASLYFC  ++Q DNEL VLEIIH YVE+LD+YFGSVCELD+IFNF KAY++LDELL+ GE+QE+SKK V + I+AQD L E
Sbjct:    2 IHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARIISAQDQLVE 143

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BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Match: gi|74625414|sp|Q9P7N2.1|AP1S1_SCHPO (RecName: Full=AP-1 complex subunit sigma-1; AltName: Full=Sigma1-adaptin; AltName: Full=Valproic acid-sensitive protein 2)

HSP 1 Score: 186.422 bits (472), Expect = 1.086e-59
Identity = 85/147 (57.82%), Postives = 116/147 (78.91%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQ 174
            I+F LL SRQGK+RL KWF   + + + K+ RD+ + ++ RKPKM +F+E++  KIVY+RYASL+F C +EQ DNELI+LE+IH++VE LDKYFG+VCELD+IFNFEKAY++++ELLL GE+QE+SK NVL A+ A D   E +  Q
Sbjct:    3 IKFFLLVSRQGKVRLAKWFNTLSIKERAKIIRDVSSLVITRKPKMCNFVEYKGEKIVYRRYASLFFVCGIEQDDNELIILEVIHKFVECLDKYFGNVCELDLIFNFEKAYYVMEELLLAGELQESSKTNVLSAVLAGDAESEADAQQ 149

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BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Match: gi|182627487|sp|B0G185.1|AP1S2_DICDI (RecName: Full=AP-1 complex subunit sigma-2; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1B; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1B; AltName: Full=Clathrin assembly protein complex 1 sigma-1B small chain; AltName: Full=Sigma 1B subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1B; AltName: Full=Sigma1B-adaptin)

HSP 1 Score: 179.874 bits (455), Expect = 3.245e-57
Identity = 82/141 (58.16%), Postives = 111/141 (78.72%), Query Frame = 0

Query:   29 QFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQE 169
             F+LL SRQGK RL KW++  T + K + +R++   +L R PK+ +FLEW++ KI++KRYASLYF    ++ DNELIVLEIIH +VE+LD+YFG+VCELD+IFNF KAY++LDEL++ GE+QETSKK VL+ I+ QD L E
Sbjct:    4 HFLLLLSRQGKTRLTKWYSPFTNKEKSRFTREIGNMVLNRPPKLCNFLEWKEYKIIFKRYASLYFVVCCDREDNELIVLEIIHHFVEILDRYFGNVCELDLIFNFHKAYYILDELIMAGELQETSKKTVLRLISQQDTLLE 144

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BLAST of ap-1 complex subunit sigma-2 vs. nr
Match: gi|225710238|gb|ACO10965.1| (AP-1 complex subunit sigma-2 [Caligus rogercresseyi])

HSP 1 Score: 290.426 bits (742), Expect = 1.921e-98
Identity = 138/156 (88.46%), Postives = 151/156 (96.79%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            IQ+MLLFSRQGKLRLQK+FTAQ+E++KKKMSRDLI  IL RKPKMSSFLEW+DLKIVYKRYASLYFCCA+E+ DNEL+VLE+IHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGE+QETSKKNVLKAI+AQD LQEEETPQGFFED+GLG
Sbjct:    2 IQYMLLFSRQGKLRLQKYFTAQSEKNKKKMSRDLINNILSRKPKMSSFLEWKDLKIVYKRYASLYFCCAIEEEDNELVVLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEIQETSKKNVLKAISAQDCLQEEETPQGFFEDSGLG 157

[Close]

BLAST of ap-1 complex subunit sigma-2 vs. nr
Match: gi|225717998|gb|ACO14845.1| (AP-1 complex subunit sigma-2 [Caligus clemensi])

HSP 1 Score: 290.041 bits (741), Expect = 2.500e-98
Identity = 138/156 (88.46%), Postives = 151/156 (96.79%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            IQ+MLLFSRQGKLRLQK+FTAQ+E++KKKMSRDLI  IL RKPKMSSFLEW+DLKIVYKRYASLYFCCA+E+ DNEL+VLE+IHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGE+QETSKKNVLKAI+AQD LQEEETPQGFFED+GLG
Sbjct:    2 IQYMLLFSRQGKLRLQKYFTAQSEKNKKKMSRDLINSILSRKPKMSSFLEWKDLKIVYKRYASLYFCCAIEEEDNELVVLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEIQETSKKNVLKAISAQDCLQEEETPQGFFEDSGLG 157

[Close]

BLAST of ap-1 complex subunit sigma-2 vs. nr
Match: gi|225718920|gb|ACO15306.1| (AP-1 complex subunit sigma-2 [Caligus clemensi])

HSP 1 Score: 286.96 bits (733), Expect = 5.630e-97
Identity = 137/156 (87.82%), Postives = 150/156 (96.15%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            IQ+MLLFSRQGKLRLQK+FTAQ+E++KKKMSRDLI  IL RKPKMSSFLEW+DLKIVYKRYASLYFCCA+E+ DNEL+VLE+IHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGE+QETSKK VLKAI+AQD LQEEETPQGFFED+GLG
Sbjct:    2 IQYMLLFSRQGKLRLQKYFTAQSEKNKKKMSRDLINNILSRKPKMSSFLEWKDLKIVYKRYASLYFCCAIEEEDNELVVLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEIQETSKKYVLKAISAQDCLQEEETPQGFFEDSGLG 157

[Close]

BLAST of ap-1 complex subunit sigma-2 vs. nr
Match: gi|1325316243|ref|XP_023339834.1| (AP-1 complex subunit sigma-2-like [Eurytemora affinis])

HSP 1 Score: 284.263 bits (726), Expect = 6.424e-96
Identity = 135/156 (86.54%), Postives = 147/156 (94.23%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            IQ++LLFSRQGKLRLQKWF A +E +KKK++RDLI+ IL RKPKMSSFLEW+D+KIVYKRYASLYFCCA+E  DNELI LEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDE ++GGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG
Sbjct:    2 IQYLLLFSRQGKLRLQKWFAAYSEGAKKKITRDLISTILSRKPKMSSFLEWQDVKIVYKRYASLYFCCAIENNDNELIALEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDEFIIGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 157

[Close]

BLAST of ap-1 complex subunit sigma-2 vs. nr
Match: gi|1009556701|ref|XP_015913580.1| (AP-1 complex subunit sigma-2 [Parasteatoda tepidariorum])

HSP 1 Score: 283.493 bits (724), Expect = 9.745e-96
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            +QFMLLFSRQGKLRLQKW+ A  +R KKK++R+L+  IL RKPKM SFLEWR+LK+VYKRYASLYFCCAVEQCDNEL+ LEIIHRYVELLDKYFGSVCELDIIFNFEKAYF+LDELLLGGE+QETSKKNVLKAIAAQDLLQEEETPQGFFED GLG
Sbjct:    2 MQFMLLFSRQGKLRLQKWYVAHPDRLKKKITRELVTTILTRKPKMCSFLEWRELKVVYKRYASLYFCCAVEQCDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLLGGEIQETSKKNVLKAIAAQDLLQEEETPQGFFEDHGLG 157

[Close]

BLAST of ap-1 complex subunit sigma-2 vs. nr
Match: gi|675372016|gb|KFM64918.1| (AP-1 complex subunit sigma-2, partial [Stegodyphus mimosarum])

HSP 1 Score: 283.108 bits (723), Expect = 1.668e-95
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            +QFMLLFSRQGKLRLQKW+ A  ++ KKK++R+L+  IL RKPKM SFLEW+DLK+VYKRYASLYFCCAVEQCDNEL+ LEIIHRYVELLDKYFGSVCELDIIFNFEKAYF+LDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFED GLG
Sbjct:    2 MQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELVTTILARKPKMCSFLEWKDLKVVYKRYASLYFCCAVEQCDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDHGLG 157

[Close]

BLAST of ap-1 complex subunit sigma-2 vs. nr
Match: gi|225711792|gb|ACO11742.1| (AP-1 complex subunit sigma-2 [Caligus rogercresseyi])

HSP 1 Score: 283.108 bits (723), Expect = 1.881e-95
Identity = 135/156 (86.54%), Postives = 149/156 (95.51%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            IQ+MLLFSRQGKLRLQK+FTAQ+E++KKKMSRDLI  IL RKPKMSSFLEW+DLKIVYKRYASLYFCCA+E+ D EL+VLE+IHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGE+QETSKKNVL+AI+A D LQEEETPQGFFED+GLG
Sbjct:    2 IQYMLLFSRQGKLRLQKYFTAQSEKNKKKMSRDLINNILSRKPKMSSFLEWKDLKIVYKRYASLYFCCAIEEEDYELVVLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEIQETSKKNVLRAISAPDCLQEEETPQGFFEDSGLG 157

[Close]

BLAST of ap-1 complex subunit sigma-2 vs. nr
Match: gi|1207909529|ref|XP_021368366.1| (AP-1 complex subunit sigma-2 isoform X4 [Mizuhopecten yessoensis])

HSP 1 Score: 281.182 bits (718), Expect = 8.178e-95
Identity = 133/156 (85.26%), Postives = 147/156 (94.23%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            +QFMLLFSRQGKLRLQKW+TA T+++KKK++R+LI  +L RKPKM SFLEW+DLKIVYKRYASLYFCCA+E  DNEL+ LE+IHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQ+TSKKNVLKAIAAQDLLQEEETPQGFFED GLG
Sbjct:    2 MQFMLLFSRQGKLRLQKWYTAHTDKAKKKITRELITLVLARKPKMCSFLEWKDLKIVYKRYASLYFCCAIEPEDNELLTLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQDTSKKNVLKAIAAQDLLQEEETPQGFFEDHGLG 157

[Close]

BLAST of ap-1 complex subunit sigma-2 vs. nr
Match: gi|1227993246|ref|XP_021928394.1| (AP-1 complex subunit sigma-2 isoform X2 [Zootermopsis nevadensis] >gi|1339049661|ref|XP_023713076.1| AP-1 complex subunit sigma-2 isoform X1 [Cryptotermes secundus] >gi|1339049665|ref|XP_023713078.1| AP-1 complex subunit sigma-2 isoform X1 [Cryptotermes secundus] >gi|1339049667|ref|XP_023713079.1| AP-1 complex subunit sigma-2 isoform X1 [Cryptotermes secundus] >gi|1339049669|ref|XP_023713080.1| AP-1 complex subunit sigma-2 isoform X1 [Cryptotermes secundus])

HSP 1 Score: 280.796 bits (717), Expect = 1.493e-94
Identity = 133/156 (85.26%), Postives = 146/156 (93.59%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            +QFMLLFSRQGKLRLQKW+ A  ++ KKK++R+LI  IL RKPKMSSFLEW+DLK+VYKRYASLYFCCA+EQ DNEL+ LEIIHRYVELLDKYFGSVCELDIIFNFEKAYF+LDELLLGGE+QETSKKNVLKAIAAQDLLQEEETPQGFFED GLG
Sbjct:    1 MQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTILARKPKMSSFLEWKDLKVVYKRYASLYFCCAIEQKDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLLGGEIQETSKKNVLKAIAAQDLLQEEETPQGFFEDHGLG 156

[Close]

BLAST of ap-1 complex subunit sigma-2 vs. nr
Match: gi|1101347969|ref|XP_018899840.1| (PREDICTED: AP-1 complex subunit sigma-2 isoform X2 [Bemisia tabaci])

HSP 1 Score: 280.411 bits (716), Expect = 1.632e-94
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 0

Query:   28 IQFMLLFSRQGKLRLQKWFTAQTERSKKKMSRDLIAQILVRKPKMSSFLEWRDLKIVYKRYASLYFCCAVEQCDNELIVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDAGLG 183
            +QFMLLFSRQGKLRLQKW+ A  ++ KKK++R+LIA IL RKPKM SFLEW+DLKIVYKRYASLYFCCA+EQ DNEL+ LEIIHRYVELLDKYFGSVCELDIIFNFEKAYF+LDELLLGGE+QETSKKNVLKAIAAQDLLQEEETPQGFFED GLG
Sbjct:    2 MQFMLLFSRQGKLRLQKWYVAHPDKIKKKITRELIATILARKPKMCSFLEWKDLKIVYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLLGGEIQETSKKNVLKAIAAQDLLQEEETPQGFFEDHGLG 157

The following BLAST results are available for this feature:

BLAST of ap-1 complex subunit sigma-2 vs. L. salmonis genes
BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
BLAST of ap-1 complex subunit sigma-2 vs. nr

BLAST of ap-1 complex subunit sigma-2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 5


Match Name	E-value	Identity	Description
EMLSAG00000007257	1.028e-101	88.46	supercontig:LSalAtl2s:LSalAtl2s408:42626:44752:1 g...	[more]
EMLSAG00000001508	2.783e-74	67.10	supercontig:LSalAtl2s:LSalAtl2s125:280180:281536:1...	[more]
EMLSAG00000009173	1.083e-55	55.70	supercontig:LSalAtl2s:LSalAtl2s57:41205:42872:1 ge...	[more]
EMLSAG00000006382	4.228e-42	45.39	supercontig:LSalAtl2s:LSalAtl2s34:495818:496246:-1...	[more]
EMLSAG00000001262	1.623e-29	36.42	supercontig:LSalAtl2s:LSalAtl2s1206:25785:30904:1 ...	[more]

BLAST of ap-1 complex subunit sigma-2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|3023308\|sp\|P56377.1\|AP1S2_HUMAN	1.929e-85	78.21	RecName: Full=AP-1 complex subunit sigma-2; AltNam...	[more]
gi\|21541960\|sp\|Q9DB50.1\|AP1S2_MOUSE	1.788e-84	76.10	RecName: Full=AP-1 complex subunit sigma-2; AltNam...	[more]
gi\|48428719\|sp\|P61966.1\|AP1S1_HUMAN	1.490e-81	73.25	RecName: Full=AP-1 complex subunit sigma-1A; AltNa...	[more]
gi\|122134020\|sp\|Q1JQ98.1\|AP1S1_BOVIN	1.875e-81	73.25	RecName: Full=AP-1 complex subunit sigma-1A; AltNa...	[more]
gi\|81912002\|sp\|Q7TN05.1\|AP1S3_MOUSE	1.326e-71	68.31	RecName: Full=AP-1 complex subunit sigma-3; AltNam...	[more]
gi\|21541959\|sp\|Q96PC3.1\|AP1S3_HUMAN	3.602e-69	66.21	RecName: Full=AP-1 complex subunit sigma-3; AltNam...	[more]
gi\|75272482\|sp\|Q8LEZ8.1\|AP1S1_ARATH	1.300e-61	61.97	RecName: Full=AP-1 complex subunit sigma-1; AltNam...	[more]
gi\|75097963\|sp\|O23685.1\|AP1S2_ARATH	1.290e-60	61.97	RecName: Full=AP-1 complex subunit sigma-2; AltNam...	[more]
gi\|74625414\|sp\|Q9P7N2.1\|AP1S1_SCHPO	1.086e-59	57.82	RecName: Full=AP-1 complex subunit sigma-1; AltNam...	[more]
gi\|182627487\|sp\|B0G185.1\|AP1S2_DICDI	3.245e-57	58.16	RecName: Full=AP-1 complex subunit sigma-2; AltNam...	[more]

Pages

BLAST of ap-1 complex subunit sigma-2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225710238\|gb\|ACO10965.1\|	1.921e-98	88.46	AP-1 complex subunit sigma-2 [Caligus rogercressey...	[more]
gi\|225717998\|gb\|ACO14845.1\|	2.500e-98	88.46	AP-1 complex subunit sigma-2 [Caligus clemensi]	[more]
gi\|225718920\|gb\|ACO15306.1\|	5.630e-97	87.82	AP-1 complex subunit sigma-2 [Caligus clemensi]	[more]
gi\|1325316243\|ref\|XP_023339834.1\|	6.424e-96	86.54	AP-1 complex subunit sigma-2-like [Eurytemora affi...	[more]
gi\|1009556701\|ref\|XP_015913580.1\|	9.745e-96	85.90	AP-1 complex subunit sigma-2 [Parasteatoda tepidar...	[more]
gi\|675372016\|gb\|KFM64918.1\|	1.668e-95	85.90	AP-1 complex subunit sigma-2, partial [Stegodyphus...	[more]
gi\|225711792\|gb\|ACO11742.1\|	1.881e-95	86.54	AP-1 complex subunit sigma-2 [Caligus rogercressey...	[more]
gi\|1207909529\|ref\|XP_021368366.1\|	8.178e-95	85.26	AP-1 complex subunit sigma-2 isoform X4 [Mizuhopec...	[more]
gi\|1227993246\|ref\|XP_021928394.1\|	1.493e-94	85.26	AP-1 complex subunit sigma-2 isoform X2 [Zootermop...	[more]
gi\|1101347969\|ref\|XP_018899840.1\|	1.632e-94	85.90	PREDICTED: AP-1 complex subunit sigma-2 isoform X2...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold185_size275389	supercontig	scaffold185_size275389:244286..250334 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:vesicle-mediated transport

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold185_size275389-snap-gene-1.35-mRNA-1	maker-scaffold185_size275389-snap-gene-1.35-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold185_size275389:244286..250334-

gene from alignment at scaffold185_size275389:244286..250334-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold185_size275389-snap-gene-1.35 ID=maker-scaffold185_size275389-snap-gene-1.35|Name=ap-1 complex subunit sigma-2|organism=Tigriopus kingsejongensis|type=gene|length=6049bp|location=Sequence derived from alignment at scaffold185_size275389:244286..250334- (Tigriopus kingsejongensis)
ATGAACGGTCTCAACACGATTGGCTCACAGGAGCATAGCACCCTCAAAAT
CCCCCCTCGCTACTCTATGATTGGCTGTCACGTGAGAGTCGGCTGACAAA
CGGCCCGCAACAAAAGGGAGTGTCGGGACTTTCTTACATCACATGTTCGG
GGTCATCTGAAAATGTAATCTGGGAATCATGAATATTAATCATGTTTAAC
ATTTTAGTACTCCTCGAGTGACTGAAGCTTACCTTACATGTTCGGCGTCA
TCCGAAAATGTGATCTTTAAATGATGAATATTAATCATTATTAACATTTC
TGTACTCATCGCGTGACTGAAGCTTATGTTAAATCACATGTTTAGCGCCG
CCTGAAAGACTTCAGAATTTGCGGGCTATCCCGATGAGATTCGCCATTGA
GTATCGTCGTTGGAGCCTGATGTCCAATCCATATTTGTTTCCAAAATATC
CCAGATGAGCAGCAATCTTTAATATCGTATATATATATAACACTGGGCTC
GAAAACGATGTCAACTGTTTAGCTTTGACTAGGATATGAACAACATTATT
CTTTGATTTCATCCCTCAGGCGCTATCTACCGCTGGGTGGGAGTTCTCCA
TATGGCAGTGCTAAATTCATGCCAGGAAGAAGCCAAGCGAGAAGCCAGGC
CAGGATAAACACGCCCAGGAAGTCTCTAAGCAAATATTTAACGGTGTGTC
CCCACACAACCCTATCCCACTCATAAAGAATCACTAGACTGTCTCAAGCA
AACCCACTGTTTCTTTCGCAACCGTTTGATCAGTCATTTTCAAAAGTTTG
CTCTTTGGGACAGTCCATTTCGCCCACTTTAGGCTTCGCACCCTCAGGGA
ACCTCTGTTGATGACCATGATGTCATGACGGCTCTGGGTCTGATCAGTGT
GACCGGACTGCTCGTTGCTCTGCCTAAATTATCTATGGCAAGGAAATTAA
CGTCGCGTTTAAAATACGTGTTCGAAAGGACACTGAAGCGATGTGCCAAT
TGGAACGCTATGAAAATACGCCATGCCACAGAAAAGTACTGGCAAGCAAT
TTCTACACTGGCTGTCGGGGCAATTTGGTTGATTACAAACAAGCTGGCAC
AAGAAGATTTTGCGTGTTTGAACCGAAATTAACTTATATCTGTGGCTTTT
TCATCAATTTGGGTTTAAAAGATTTTATTTTCCTTTTTTTGTGACCGCTT
TTGTGCATGTCGTTATCCTCCTTGGACACAGGAATCAACACCACAGAAAA
ATCACGATGGCACGCTGTAGTCCAGCTCGATTGTCTTCCCTTTAACCCTT
TCTTGGTCAAACCATGTGGTCTTCATGTGGTGGCTTTTGTGGTTACTGAT
TGATTTGTCTGCGTGATATAGCATTGATGTTCGAATTTTGACGCGTTTGG
TTGGGGAAATAATACGTTATTTTCGTTTGGCAATTCTTATCTCGCCTTTG
CTACTATAACCATATCCATAGGCTATGTGGTCAACGCAAATAATGTTTCA
CCCATGGGATCTAGGCTTACTTACTTGTAATAGCAATCGTTTAGCTTTAG
GTCACATGGGAAAAATCTAATAATAAAATTGCGTTCTAAGTTGGAGGTTG
GAGACGTGACAAGTTTTCGAAGCATTCAAACTTGGCGCCCCTGGAGAGCA
AAGAAGTCTTTTTGAATTGTCACCAATAAGGGCCATTTTTGACGAAGAAC
AATTTTTCTCATAATGACCAGGTTTAGCTCCATTGTTTCTGTCCACTGGG
TGATAATACGCCCACATCAAACAATTTGAATTACTTCAAAACCCAGTTTT
TGCCTGTCCACTGAAAATTACTTTTACAAAAGCATATGTTTTGTTTCCAT
CGGAAGGGAGATCAATGGATTCCTTTTTTTTTTACCATACCGGTGATCTG
TTTTCTTAAATGGCGATAGCATTCACAACCGTTGATGGGGCCAAAACTGT
GATTAAATAAACACCTGCTTAAATAAGCTTGTGTTAATTTAATTGCCTGG
TTTTTTGACATGTAGTAGAGTGTTCAATTGGCTAAATTTTCAATTAATTG
GTGAACTGACTTCTCATTGTTTTTCGATAAACTGCTTAAATTTTGAATAC
ATTACTAGAACATACGTATAAATCGACCATCTAACTCTCAAGTCACGCCC
TCGTTGGGGGTCAAAGTTCAACAAAAACCATACTCAAAGGAATAGTGGCA
ATTCAGTCCAACACATGAGGGTTATTCTGGGCCTAGCGTGCTGAGGATCG
ATCAGGTCGGCCTCGTCGGAGTTGTTGAGGCGCAATCCGAGCGCCAGGTA
CCTGGCCCAGACATCCACCGACACTTGGAATAAATTCCTCGAACTCCGAG
CGGCCTTGACGTGGCCTGCAGCGAGCCAGGTGGCCAAGCAAGTGTCCAGG
CGGACTCCAATCCTGTGATACATGTATTCGTATAAGAACATTTCGACTCG
ATTAATATTCCGTGATATCCAATGACTTGCCATCAATACCGAGGATACTT
CTAACAGATTGATTGAAAGTGCCATAATACTACATATCATGATTTATACA
CATAATACACCGACTTATTGAGTGGAACTGTTCCATTATTTGGAAGAAAA
AGACCAAACAAGGGCAGGAAAACAACAGCAATCGGACATACCCGATAGTT
TTCATATGAATACTCTGGGGTAGAATGCATGCCCCGACCGAAGCCTTGCG
ATCTTCCAAGGGGAAGCCCGGAGGATAGATATGTTTGTGATTGGGCCATT
ACTGTCTCGCTGGAAATTGGTCACGCTGAAATATTCACCCACATCTGGAA
ATTGCCTTTGGACTGTTTCGAGGCCGTCAACTCCCACAGTGAATGTCAAC
AGATTGAAAGCCGAACGTGGAACTTGGGGCTTGGGAGCATGGACCACTGA
CCTCGGAGCATCATGGTAAGTGACAGAGGAACCAGAAACAGGACTGAGGT
GACGACTGGGCATGACCTGAAACTACTTTTTGCAGATTCAGTTTATGCTC
TTGTTCTCGCGCCAAGGCAAACTTCGCCTCCAGAAATGGTTCACGGCCCA
AACGGAGCGTTCCAAGAAGAAGATGTCCCGCGATCTCATCGCCCAGATTC
TGGTCAGAAAGCCGAAAATGTCCTCCTTCCTTGAGTGGCGGGACCTCAAG
ATTGTCTACAAGAGGTACCAACTCCGGTGTCCCCGATATTGACCCAAGTC
TTGTACATCTTGTGAAGCTTACCTTAAATTTGGTGGGTCTTACAGATACG
CCAGTCTCTATTTCTGCTGCGCCGTGGAGCAATGTGACAATGAGTTGATA
GTCCTGGAGATCATCCATCGCTACGTGGAGCTGCTGGACAAGTACTTTGG
CAGTGTTTGCGAATTGGACATCATTTTCAACTTTGAAAAGGCCTATTTCA
TGCTCGATGAGCTGCTTCTCGGTGGAGAGGTCCAAGAAACGTCCAAGAAA
AATGTACTAAAGGCCATTGCGGCCCAAGATCTGCTTCAAGAGGTGAGTTT
GGCCGGATACGATGAATAAGAGAACCAAAACCTTCAGAACTTCCATTTTT
TTTAGCTAGATTGACTGTTGTTAGCCTGGGTTTTGGCCATGATTATCATT
GTTCAGAACAGGAATTGTTACTCCGACAAGTCATGATGTCGTGAAATGCG
CAAAATGTGAGAAGCCCCAGATCCAAGATCAACTTACTTTCAGTGGGACA
AAACCTTCATCAACGCATAGGAAAAACCACTTACAAATAAAAGGGAAACA
ACAAATTGAGGAGAAGTGAACAGTCGAACTAATTGCTAAATACATGAATC
AAGTAAACGGCAAATAGTAAACCCCTAACCTCAGGAACCAACCAACCATA
GCTTACGGAGAGCTGCGGTGGTGCCGACCGGCCAGGGTTCGAATCCCGGG
CTTCGTAGTTCACGGCAACTTGTGGTAGTCATTCAGTGTTTGCATTCGTT
GCGGTATGAAATTGGCCGGACTTGTGGTATATCCTCGAGGGTAAGGTTTC
TCTTACCTCAATAGGAGAGGAACGCTAGCTGAACCAGTTGCTCGATATCC
GTGCATTATAACGAAAAAACGTGACTCTACTCGCTAACTTCGAACCCTCA
ACACGTGCCTATTTGACAGTAGCTATGGACGCTTACAGGCAATAATTCCA
AATTTATCATGTTTCAATAGAGATTTTCTAGCTAAACAAAAATGTCAGGG
GCCTTCCAAATAAATGAAAAACAAGTAAACCCTTGAAGAAATGAAATTGC
AATCGGCAGCAATTTTTTTTAATGACCAAAATCGCAAATTGAGTGAAAAC
TTGTGCGGAAAGAGCCCTCCAAAGGAGTACGCTACCTAGATCAATGAATA
AAAATAGGATAAATGGGGGAACCTAAAATAAAAATTCAGAAGTCGAAAAT
CTTAAATGAGGAAAGTTGCCTGATGACGTCTAAAAATTGAAAGGCGAATT
TAGATAAAACGGCGAAAAATGAAACACTGATGTTTTTCATGTTTGGCTGT
TTTTGAAGATTTCTTTTAAATGATCAGCTTTTAGAGGTAAATCTAAATAG
TCACGGCTCTTTGAGGTAAATCTGGGAAGTGCTGCTCTCGTCCCCTCACT
TTGACGCCCATCTCGGTCAAACTTGACCATGGATTTAAGCCGAAGCTGTC
GGGTTATTTTTCAATCAAGGATATTGGTTTTGCGTGCCGATTGTTTGCTC
GCTTTCCCAGAACTTTATTGGAGAAAACGCAAGTCGAATTGGTTCCTGAG
AGCTTCAGCCAATGCGTAGGTGCCAATGACTATCGTCAGGATCACGCCTG
TTCAATGTGTCACTTCATTCCCGAGTTAGTTTCTTTGGTTCGTAAGAATA
TAGTGATGATAACTTCATCGCAAATGACTGATGACTGGAAGTGCCATTAG
AGCATAATAGGTGGCAGATAGCTTTTTGCTCGAGTCTGATGCGATTTCAT
GACAAATACCATGACTAATACCAGCATTTTACGACAGTTCAATAACACGC
AATCGAGCCAAGAACTCATGGTGACTCACAAACTGCGCTTTCTCATGTAA
TGAGACAGCATTCAGACACTTTCGGCTTCATGTAAAGGTTTGGCATATTC
TTCTCACGTCTTTTTTGTTTTGTTACCATGAGAGTTTCCGAGCTATCGAG
TTATTTCAGATGTTTTTTTGGGTTCCACCAAAGTTTAGGTCACACTGGAA
AATAAGTGTTTGATTCCTGCGTCCTCGGATGTTAAATTTAACTGCCCTCA
AAACGACCTGTATTCCACAATTACTCACTTTTTCGTGTCACCTAACACCA
CGGTTAATTGAAGCATTTCAGTCTATCTAGTTCAATCTTCATATCCAAAG
ATGTTAATAGAATGAACTTTTTGAAAAAAATAAATATTTACGTATATTTT
TGAGACGGAAAATTACTTCATATCAAGGGAATTTACCCCAAAAATGTACT
GCAGCTCCGGAACTTTATCTTTGTGGGTCTAAAAAATGTCTTAACAAACA
TTAAAAAAACCACCATTTTTTGGGGTATTTGACATATTTGATTACACTTT
AAGTCAACTTTTGGCAATGTTGATTGATTTTTTCCTGTTTTTTTGCATTT
CCCACTTTTCCGCAGATTTGAAACCCCCACTCGCTTTGGTGGGTTTTGGG
ATATGGGCATGGTTCTCAACTCCCACCTAAGTAGTTGGCAATAATGGAAC
GGAGAATAATTGGAAATTTGGTGGACAGAAAAGAGAGATTCTGGAGGCAT
TAGTTCTGGTGGTATTGTTTTCACGGTTTTCATTTTTTCTCTTTCAGGAG
GAAACCCCGCAGGGATTTTTCGAGGACGCCGGCCTCGGCTGAGGCCCTTG
GAATGTTGCTTTGCGTTGTTGACTTGCCATATCAAGGAGCGGTGACTTTC
AATGCCAAACTTTGGGTCGTTTCTGTATTCAGACCGTATCTGACGTCCGC
CCAGAGCATTTACCACCTATATTTGCATGTGCTTATGAGTTGTTTCCCTC
AATAAAGACCATACCATTCCCTTAACTCGTTGTGGCGTGATTTTGCACA

Synonyms

The feature 'ap-1 complex subunit sigma-2' has the following synonyms


Synonym
Tk02518

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