troponin isoform 1, maker-scaffold18_size714446-snap-gene-5.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000007651 (supercontig:LSalAtl2s:LSalAtl2s443:420476:476013:-1 gene:EMLSAG00000007651 transcript:EMLSAT00000007651 description:"maker-LSalAtl2s443-snap-gene-4.40") HSP 1 Score: 265.388 bits (677), Expect = 1.858e-92 Identity = 135/151 (89.40%), Postives = 146/151 (96.69%), Query Frame = 0 Query: 20 MATGLSEEKMKDIGLEPEQVEVLMKCFNGFCKEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 MATGLSEE+MK+IGLEP+QVEVLMKCFNGFC+EGVV A TVGEILQMMGLRVK++AL+ IIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMR+ELKEAFRFYDK+GVGYL+IETLKGILLELEPKL D QLMEIV+EVDEDGSGTIDFD Sbjct: 1 MATGLSEERMKEIGLEPDQVEVLMKCFNGFCQEGVVQAETVGEILQMMGLRVKQQALQAIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRKELKEAFRFYDKEGVGYLTIETLKGILLELEPKLTDEQLMEIVEEVDEDGSGTIDFD 151
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000005879 (supercontig:LSalAtl2s:LSalAtl2s318:522663:523631:-1 gene:EMLSAG00000005879 transcript:EMLSAT00000005879 description:"augustus_masked-LSalAtl2s318-processed-gene-4.3") HSP 1 Score: 180.259 bits (456), Expect = 1.152e-58 Identity = 96/153 (62.75%), Postives = 118/153 (77.12%), Query Frame = 0 Query: 20 MATGLSEEKMKDIGLEPEQVEVLMKCFNGFCKE-GVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFDG 171 M LS+E+M +GL+ EQV VL +CF+GF E G + A VG IL MMGL+VK +LKDIIEE+DEDGSG LEF EFC L+ARFLIEEDEE +++ELKEAFR YDK+G GY+S ETL+ IL EL+ KL + I++EVDEDGSGT+DFDG Sbjct: 1 MTDLLSQEEMDAMGLDTEQVHVLKRCFDGFADEDGAIPADNVGNILSMMGLKVKPASLKDIIEEIDEDGSGLLEFGEFCQLSARFLIEEDEEALKKELKEAFRIYDKEGNGYISTETLREILRELDNKLTSDDIDGIIEEVDEDGSGTLDFDG 153
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000003476 (supercontig:LSalAtl2s:LSalAtl2s18:1777138:1777861:-1 gene:EMLSAG00000003476 transcript:EMLSAT00000003476 description:"maker-LSalAtl2s18-augustus-gene-17.20") HSP 1 Score: 123.635 bits (309), Expect = 2.476e-36 Identity = 78/148 (52.70%), Postives = 107/148 (72.30%), Query Frame = 0 Query: 26 EEKMKDIGLEPEQVEVLMKCFNGF--CKEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEE-DEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 EE + LE ++++VL CFN F K+ + A + +IL+ MG R KE LK+I+EE+DEDGSGE+EF EFC L A+FL+EE DEE M+ ELKEAFR YDKDG G+++ + L+ I+ EL+P+L L I++E+DEDGSGT+DFD Sbjct: 22 EEISEATALETDEIKVLKLCFNLFDVRKQDFLGADDLDDILRAMGFRPSKEELKEILEEIDEDGSGEIEFGEFCQLCAKFLVEEPDEETMKAELKEAFRVYDKDGAGFITTDQLREIIAELDPRLTGEDLDGIIEEIDEDGSGTMDFD 169
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000007153 (supercontig:LSalAtl2s:LSalAtl2s403:109735:110241:1 gene:EMLSAG00000007153 transcript:EMLSAT00000007153 description:"augustus_masked-LSalAtl2s403-processed-gene-1.0") HSP 1 Score: 118.627 bits (296), Expect = 1.400e-34 Identity = 78/152 (51.32%), Postives = 109/152 (71.71%), Query Frame = 0 Query: 23 GLSEEKMKDI-GLEPEQVEVLMKCFNGF--CKEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEE-DEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 G+ +KD+ GLE ++++VL CFN F + + A + +IL+ MG R KE LK+I+EE+DEDGSGE+EFEEFC L A+FLIEE DEE M+ ELKEAFR YDK+ G+++ + L+ I+ EL+ +L L I++E+DEDGSGT+DFD Sbjct: 9 GIDFXAIKDVTGLETDEIKVLKICFNMFDVKDQAFLSADDLDDILRGMGFRPSKEELKEILEEIDEDGSGEIEFEEFCQLCAKFLIEEPDEETMKAELKEAFRVYDKEANGFITTDQLREIISELDQRLTVDDLDGIIEEIDEDGSGTMDFD 160
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000005578 (supercontig:LSalAtl2s:LSalAtl2s2:1932686:1933237:-1 gene:EMLSAG00000005578 transcript:EMLSAT00000005578 description:"maker-LSalAtl2s2-augustus-gene-19.6") HSP 1 Score: 95.9005 bits (237), Expect = 5.458e-26 Identity = 64/140 (45.71%), Postives = 87/140 (62.14%), Query Frame = 0 Query: 33 GLEPEQVEVLMKCFNGFC--KEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 GL+ QVE L K F C E + + ++M+G+ V K + D +EE D + E+FC +A+RF+ EED E+MR ELKEAFR YD++G GY++ LK IL E++P L QL I+ EVDEDGSGT+DFD Sbjct: 3 GLDLLQVESLQKAFE-VCGQNEETIDTELLVTSIKMLGVNVTKAGVMDAVEESGLDPEAKFNLEQFCFIASRFINEEDVEEMREELKEAFRIYDREGNGYITTGVLKEILKEIDPSLTAEQLEGIIQEVDEDGSGTVDFD 141
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000008774 (supercontig:LSalAtl2s:LSalAtl2s545:134602:142913:1 gene:EMLSAG00000008774 transcript:EMLSAT00000008774 description:"augustus_masked-LSalAtl2s545-processed-gene-1.3") HSP 1 Score: 78.5666 bits (192), Expect = 5.168e-19 Identity = 46/138 (33.33%), Postives = 78/138 (56.52%), Query Frame = 0 Query: 34 LEPEQVEVLMKCFNGFCK--EGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDF 169 L P++++ F+ F K +G + + ++ G + ++D+I EVD DGSG LEF EFC++ + L + D+E ELKE FR + KD G ++ E LK +L L K+ ++ E++ VD++G G I++ Sbjct: 5 LRPDELQAFKAAFDMFDKNQDGTISTKELHAAMRRAGQNPTEAEVQDMINEVDVDGSGYLEFPEFCMMMHKKLNDGDQEN---ELKEVFRVFGKDETGCITAEELKFVLTHLPGKVTYKEIDEMIRTVDQNGDGKINY 139
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000007325 (supercontig:LSalAtl2s:LSalAtl2s412:129788:148284:-1 gene:EMLSAG00000007325 transcript:EMLSAT00000007325 description:"maker-LSalAtl2s412-augustus-gene-1.21") HSP 1 Score: 76.6406 bits (187), Expect = 1.944e-18 Identity = 45/144 (31.25%), Postives = 80/144 (55.56%), Query Frame = 0 Query: 29 MKDIGLEPEQVEVLMKCFNGFCKEG--VVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 M I L EQV L + FN F +G + +G ++ MG+ ++ L ++I E D DGSG++EF EFC + A + ++E+M ++ AFR D+DG G ++ + ++ + KL ++ ++ E D+DG G +D++ Sbjct: 1 MAGIDLTREQVAELREAFNEFDDDGSGTITTQELGYAMRAMGMNPTEQELLELINEFDTDGSGQIEFPEFCNMMAMKTGQANDEEM---VRMAFRVLDRDGSGTITSAEFRHLMTNIGDKLSATEVEMLIGEADKDGDGHLDYE 141
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000006985 (supercontig:LSalAtl2s:LSalAtl2s397:377196:491552:1 gene:EMLSAG00000006985 transcript:EMLSAT00000006985 description:"maker-LSalAtl2s397-snap-gene-5.15") HSP 1 Score: 69.707 bits (169), Expect = 8.204e-16 Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 0 Query: 34 LEPEQVEVLMKCFNGFCKEG--VVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTI 167 L EQ+ + F F K+G + + +++ +G + L+++I EVD DG+G +EFEEF + A+ + + + ++KEAFR +D+DG GY+S E ++ L L ++ E++ E D DG G + Sbjct: 6 LTEEQIAEFKEAFLLFDKDGDGTITTKELATVMRSLGQNPTEAELQEMINEVDADGNGSIEFEEFLAMMAKKV---KDNESSSDIKEAFRVFDRDGDGYISAEEXHQVMSTLGENLSSEEIDEMIREADLDGDGKV 138 HSP 2 Score: 49.6766 bits (117), Expect = 2.447e-8 Identity = 26/62 (41.94%), Postives = 42/62 (67.74%), Query Frame = 0 Query: 109 EEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 EEQ+ E KEAF +DKDG G ++ + L ++ L +A+L E+++EVD DG+G+I+F+ Sbjct: 8 EEQIA-EFKEAFLLFDKDGDGTITTKELATVMRSLGQNPTEAELQEMINEVDADGNGSIEFE 68
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000002767 (supercontig:LSalAtl2s:LSalAtl2s15:378667:382347:1 gene:EMLSAG00000002767 transcript:EMLSAT00000002767 description:"maker-LSalAtl2s15-augustus-gene-3.6") HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-15 Identity = 46/161 (28.57%), Postives = 81/161 (50.31%), Query Frame = 0 Query: 34 LEPEQVEVLMKCFNGFCKEG--VVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDG---------------------SGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFDG 171 L EQ+ + F+ F K+G + +G +++ +G + L+D+I EVD DG +G ++F EF + A + E+ E++EAFR +DKDG G++S L+ ++ L KL D ++ E++ E D DG G ++++G Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGEXPFPRQSPPMLYHSLSLYLCNGTIDFPEFLTMMAXKMKXTXSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEG 161
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000007204 (supercontig:LSalAtl2s:LSalAtl2s404:411131:411583:1 gene:EMLSAG00000007204 transcript:EMLSAT00000007204 description:"augustus_masked-LSalAtl2s404-processed-gene-4.7") HSP 1 Score: 67.781 bits (164), Expect = 4.653e-15 Identity = 41/135 (30.37%), Postives = 74/135 (54.81%), Query Frame = 0 Query: 37 EQVEVLMKCFNGFC--KEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDF 169 E++ ++ FN + +GV+ +G+IL +G + L+D+ +D DGSG ++ EF A+ L + E E+ EAF+ +DKDG G +S LK ++ + L+D ++ ++ E D DG G+I++ Sbjct: 10 EEISRFLEAFNLYDDDSDGVITTSQLGKILHYLGQNPTEAELQDLYLSMDTDGSGTIDLPEFIQSMAKRLARNNFED---EITEAFKVFDKDGNGLISSNELKCVMSNIGEILKDDEVEALIKEADVDGDGSINY 141
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136030|sp|P21797.1|TNNC1_BALNU (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 156.377 bits (394), Expect = 6.274e-48 Identity = 81/146 (55.48%), Postives = 110/146 (75.34%), Query Frame = 0 Query: 27 EKMKDIGLEPEQVEVLMKCFNGFC--KEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 E ++ GLE EQ+ VL + F+ F K+G + TV +IL+MMG++V + K IIEE+DEDGSG++EF EF LAA+FLIEEDEE M +ELKEAFR YDK+G GY++ +TLK IL EL+ +L +L+ I++E+DEDGSGT+DFD Sbjct: 5 EYAEETGLEKEQIVVLRRAFDSFDRDKKGYISPETVSDILRMMGIKVSSTSFKQIIEEIDEDGSGQIEFSEFLQLAAKFLIEEDEEAMMKELKEAFRLYDKEGNGYITTQTLKEILHELDARLTAEELVGIIEEIDEDGSGTVDFD 150
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136031|sp|P29289.1|TNNC1_HOMAM (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 151.369 bits (381), Expect = 3.926e-46 Identity = 77/139 (55.40%), Postives = 103/139 (74.10%), Query Frame = 0 Query: 34 LEPEQVEVLMKCFNGFCKE--GVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 L+ +QV+ L K FN F + G + TVG IL+MMG+++ L+++I E DEDGSGE+EFEEF LAA+FL EEDEE +++ELKEAFR YD+ G GY+++ TLK IL EL+ KL + L I++EVDEDGSGTIDF+ Sbjct: 4 LDEDQVQALQKAFNSFDTDDKGFITPDTVGVILRMMGVKISDRHLQEVISETDEDGSGEIEFEEFAALAAKFLSEEDEEALKKELKEAFRIYDRGGNGYITVHTLKEILRELDNKLTEDNLDSIIEEVDEDGSGTIDFN 142
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|19860033|sp|P47947.2|TNNC1_DROME (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 139.813 bits (351), Expect = 1.355e-41 Identity = 74/139 (53.24%), Postives = 93/139 (66.91%), Query Frame = 0 Query: 34 LEPEQVEVLMKCFNGFC--KEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 L EQ +L FN F K G + VG IL M+G ++ L DII EVDEDGSG++EFEEF LAARFL+EED E M ELKEAFR YDK+G GY++ L+ IL EL+ KL + L +++E+D DGSGT+DFD Sbjct: 5 LTKEQTALLRNAFNAFDPEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIEFEEFTTLAARFLVEEDAEAMMAELKEAFRLYDKEGNGYITTGVLREILRELDDKLTNDDLDMMIEEIDSDGSGTVDFD 143
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136050|sp|P15159.1|TNNC_TACTR (RecName: Full=Troponin C) HSP 1 Score: 137.117 bits (344), Expect = 1.997e-40 Identity = 72/139 (51.80%), Postives = 100/139 (71.94%), Query Frame = 0 Query: 34 LEPEQVEVLMKCFNGFC--KEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 L EQV++L K F+ F K+GV+ V IL+ +G +++ LKD+I E+D+DGSGELEFEEF LAARFL+EED E M+ EL+EAFR YDK G G++++ L+ IL L+ KL + +L E++ E+D DGSGT+DFD Sbjct: 7 LSKEQVQMLRKAFDMFDRDKKGVIHTNMVSTILRTLGQTFEEKDLKDLIAEIDQDGSGELEFEEFMALAARFLVEEDAEAMQEELREAFRLYDKQGQGFINVSDLRDILRALDDKLTEDELDEMIAEIDTDGSGTVDFD 145
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|68068004|sp|P47948.2|TNNC2_DROME (RecName: Full=Troponin C, isoform 2) HSP 1 Score: 135.191 bits (339), Expect = 8.812e-40 Identity = 72/142 (50.70%), Postives = 99/142 (69.72%), Query Frame = 0 Query: 31 DIGLEPEQVEVLMKCFNGF--CKEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 D L PEQ+ VL K FN F K G + V +IL++MG ++ L ++I+EVDED SG LEFEEF LAA+F++EED+E M++EL+EAFR YDK G GY+ LK IL EL+ +L + +L +++E+D DGSGT+DFD Sbjct: 5 DEDLTPEQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDRQILDELIDEVDEDKSGRLEFEEFVQLAAKFIVEEDDEAMQKELREAFRLYDKQGNGYIPTSCLKEILKELDDQLTEQELDIMIEEIDSDGSGTVDFD 146
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136033|sp|P21798.2|TNNC2_BALNU (RecName: Full=Troponin C, isoform 2) HSP 1 Score: 133.65 bits (335), Expect = 3.252e-39 Identity = 71/139 (51.08%), Postives = 93/139 (66.91%), Query Frame = 0 Query: 34 LEPEQVEVLMKCFNGFC--KEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 L+ +Q+ +L K F+GF K+G + V IL+MMG + LK++I+EVD DGSG LEFEEF LAA+F+I++D E M +ELKEAFR YDK G GY+ LK IL EL+ L L I+ E+D DGSGT+DFD Sbjct: 5 LDKDQIAMLKKAFDGFDHEKKGAINCDVVATILRMMGQAYNAQTLKELIDEVDADGSGMLEFEEFVTLAAKFIIDDDAEAMAKELKEAFRLYDKAGKGYIPTSALKDILKELDETLNAEDLDNIIGEIDTDGSGTVDFD 143
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|14286181|sp|P47949.2|TNNC3_DROME (RecName: Full=Troponin C, isoform 3) HSP 1 Score: 132.109 bits (331), Expect = 1.830e-38 Identity = 72/142 (50.70%), Postives = 98/142 (69.01%), Query Frame = 0 Query: 31 DIGLEPEQVEVLMKCFNGF--CKEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 D L PEQ+ VL K FN F K G + V +IL++MG K+ L+++IEEVDED SG LEF EF LAA+F++EED E M++EL+EAFR YDK G G++ LK IL EL+ +L + +L +++E+D DGSGT+DFD Sbjct: 5 DEDLTPEQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFGEFVQLAAKFIVEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKELDDQLTEQELDIMIEEIDSDGSGTVDFD 146
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136029|sp|P06707.1|TNNC1_ASTLP (RecName: Full=Troponin C, isotype alpha) HSP 1 Score: 126.331 bits (316), Expect = 2.444e-36 Identity = 74/138 (53.62%), Postives = 101/138 (73.19%), Query Frame = 0 Query: 34 LEPEQVEVLMKCFNGFCKE--GVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDF 169 L+ EQV L K F+ F + G + TVG IL+MMG+++ + L+ +I E DEDGSGE+EFEEF LAA+FL EEDEE +++ELKEAFR YD+ G GY++ + L+ IL EL+ +L + L EI++E+DEDGSGTIDF Sbjct: 4 LDEEQVSALQKAFDSFDTDSKGFITPETVGIILRMMGVKISERHLQQVISETDEDGSGEIEFEEFAELAAKFLSEEDEEALKKELKEAFRIYDRGGDGYITTQVLREILKELDNRLTEDNLDEIIEEIDEDGSGTIDF 141
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136034|sp|P29290.1|TNNCA_HOMAM (RecName: Full=Troponin C, isoform 2A) HSP 1 Score: 125.946 bits (315), Expect = 3.385e-36 Identity = 75/139 (53.96%), Postives = 104/139 (74.82%), Query Frame = 0 Query: 34 LEPEQVEVLMKCFNGFCKE--GVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 L+ EQ+ L K F+ F + G + TVG IL+MMG+++ ++ L+++I E DEDGSGELEFEEF LAA+FLIEEDEE ++ EL+EAFR YDK+G GY++ + LK IL EL+ +L + L I++EVDEDGSGT+DF+ Sbjct: 4 LDEEQIGALQKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQEVIAETDEDGSGELEFEEFVELAAKFLIEEDEEALKTELREAFRVYDKEGNGYITTDVLKEILRELDNRLTEEDLDSIIEEVDEDGSGTLDFN 142
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136035|sp|P29291.1|TNNCB_HOMAM (RecName: Full=Troponin C, isoform 2B) HSP 1 Score: 125.561 bits (314), Expect = 4.638e-36 Identity = 74/139 (53.24%), Postives = 103/139 (74.10%), Query Frame = 0 Query: 34 LEPEQVEVLMKCFNGFCKE--GVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 L+ EQ+ L K F+ F + G + TVG IL+MMG+++ ++ L+++I E DEDGSGELEFEEF LAA+FLIEEDEE ++ EL+EAFR YD+ G GY++ + LK IL EL+ +L + L I++EVDEDGSGT+DF+ Sbjct: 4 LDAEQLSALQKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQEVISETDEDGSGELEFEEFVELAAKFLIEEDEEALKAELREAFRVYDRGGNGYITTDVLKEILRELDNRLTEEDLDSIIEEVDEDGSGTLDFN 142
BLAST of troponin isoform 1 vs. nr
Match: gi|225714090|gb|ACO12891.1| (Troponin C, isoform 1 [Lepeophtheirus salmonis]) HSP 1 Score: 265.388 bits (677), Expect = 1.741e-88 Identity = 135/151 (89.40%), Postives = 146/151 (96.69%), Query Frame = 0 Query: 20 MATGLSEEKMKDIGLEPEQVEVLMKCFNGFCKEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 MATGLSEE+MK+IGLEP+QVEVLMKCFNGFC+EGVV A TVGEILQMMGLRVK++AL+ IIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMR+ELKEAFRFYDK+GVGYL+IETLKGILLELEPKL D QLMEIV+EVDEDGSGTIDFD Sbjct: 1 MATGLSEERMKEIGLEPDQVEVLMKCFNGFCQEGVVQAETVGEILQMMGLRVKQQALQAIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRKELKEAFRFYDKEGVGYLTIETLKGILLELEPKLTDEQLMEIVEEVDEDGSGTIDFD 151
BLAST of troponin isoform 1 vs. nr
Match: gi|225718472|gb|ACO15082.1| (Troponin C, isoform 1 [Caligus clemensi]) HSP 1 Score: 181.8 bits (460), Expect = 2.057e-55 Identity = 97/152 (63.82%), Postives = 119/152 (78.29%), Query Frame = 0 Query: 20 MATGLSEEKMKDIGLEPEQVEVLMKCFNGFCKE-GVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 M+ LS+E+M D+GL+ EQV VL +CF+GF E G + A VG IL MMGL+VK ALKDIIEE+DEDGSG LEF EFC L+ARFLIEEDEE +++ELKEAFR YDK+G GY+S ETL+ IL EL+ KL + I++EVDEDGSGT+DFD Sbjct: 1 MSDLLSQEEMDDLGLDQEQVSVLKRCFDGFSDEDGAIPADNVGNILSMMGLKVKPAALKDIIEEIDEDGSGLLEFGEFCQLSARFLIEEDEEALKKELKEAFRIYDKEGNGYISTETLREILKELDNKLTSDDIDGIIEEVDEDGSGTLDFD 152
BLAST of troponin isoform 1 vs. nr
Match: gi|225709854|gb|ACO10773.1| (Troponin C, isoform 1 [Caligus rogercresseyi] >gi|225710444|gb|ACO11068.1| Troponin C, isoform 1 [Caligus rogercresseyi]) HSP 1 Score: 180.644 bits (457), Expect = 4.325e-55 Identity = 96/152 (63.16%), Postives = 119/152 (78.29%), Query Frame = 0 Query: 20 MATGLSEEKMKDIGLEPEQVEVLMKCFNGFCKE-GVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 M+ LS+E+M D+GL+ EQV VL +CF+GF E G + A VG IL MMGL+VK ALK+IIEE+DEDGSG LEF EFC L+ARFLIEEDEE +++ELKEAFR YDK+G GY+S ETL+ IL EL+ KL + I++EVDEDGSGT+DFD Sbjct: 1 MSDLLSQEEMDDMGLDSEQVSVLKRCFDGFSDEDGAIPADNVGNILSMMGLKVKPAALKNIIEEIDEDGSGLLEFGEFCQLSARFLIEEDEEALKKELKEAFRIYDKEGNGYISTETLREILKELDNKLTSDDIDGIIEEVDEDGSGTLDFD 152
BLAST of troponin isoform 1 vs. nr
Match: gi|225713568|gb|ACO12630.1| (Troponin C, isoform 1 [Lepeophtheirus salmonis] >gi|225713648|gb|ACO12670.1| Troponin C, isoform 1 [Lepeophtheirus salmonis] >gi|290462903|gb|ADD24499.1| Troponin C, isoform 1 [Lepeophtheirus salmonis] >gi|290561539|gb|ADD38170.1| Troponin C, isoform 1 [Lepeophtheirus salmonis]) HSP 1 Score: 177.563 bits (449), Expect = 7.821e-54 Identity = 95/152 (62.50%), Postives = 117/152 (76.97%), Query Frame = 0 Query: 20 MATGLSEEKMKDIGLEPEQVEVLMKCFNGFCKE-GVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 M LS+E+M +GL+ EQV VL +CF+GF E G + A VG IL MMGL+VK +LKDIIEE+DEDGSG LEF EFC L+ARFLIEEDEE +++ELKEAFR YDK+G GY+S ETL+ IL EL+ KL + I++EVDEDGSGT+DFD Sbjct: 1 MTDLLSQEEMDAMGLDTEQVHVLKRCFDGFADEDGAIPADNVGNILSMMGLKVKPASLKDIIEEIDEDGSGLLEFGEFCQLSARFLIEEDEEALKKELKEAFRIYDKEGNGYISTETLREILRELDNKLTSDDIDGIIEEVDEDGSGTLDFD 152
BLAST of troponin isoform 1 vs. nr
Match: gi|1325328484|ref|XP_023346091.1| (troponin C, isotype gamma-like [Eurytemora affinis]) HSP 1 Score: 173.711 bits (439), Expect = 3.129e-52 Identity = 90/148 (60.81%), Postives = 120/148 (81.08%), Query Frame = 0 Query: 24 LSEEKMKDIGLEPEQVEVLMKCFNGFC-KEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 L++E+M+ IGLEP+QV VL +CF+GF +EG + A VG IL MMG++VK AL++IIE++DEDGSG LEF EFC LAA+FL+EEDEE +++ELKEAFR YDK+ +GY+S +TL+ IL EL+ KL + L I++EVDEDGSGT+DFD Sbjct: 7 LTQEEMEAIGLEPDQVLVLKRCFDGFADEEGAIPADNVGGILAMMGMKVKPSALREIIEDIDEDGSGLLEFGEFCQLAAKFLVEEDEEALKKELKEAFRIYDKECMGYISTDTLREILRELDNKLTEDDLSNIIEEVDEDGSGTLDFD 154
BLAST of troponin isoform 1 vs. nr
Match: gi|1325306181|ref|XP_023334699.1| (troponin C-like [Eurytemora affinis]) HSP 1 Score: 170.244 bits (430), Expect = 8.893e-51 Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 0 Query: 16 HSIKMATGLSEEKMKDIGLEPEQVEVLMKCFNGFCKE-GVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 HS L++E+M +GL+ +QV VL +CF+GF + G + VG IL +MG++VK ALK+IIEE+DEDGSG LEF EFC LAARFL+EEDEE +R+ELKEAFR YDK+ GY+SI+TLK IL EL+ KL + L I++EVD DGSGT+DFD Sbjct: 10 HSSMFTDLLTKEEMGRLGLDQDQVVVLKRCFDGFADDCGAIPVDHVGNILAIMGMKVKPSALKEIIEEIDEDGSGVLEFGEFCQLAARFLVEEDEEALRKELKEAFRIYDKEKNGYISIQTLKEILRELDSKLTEDDLNSIIEEVDGDGSGTLDFD 165
BLAST of troponin isoform 1 vs. nr
Match: gi|1325324438|ref|XP_023344064.1| (troponin C-like [Eurytemora affinis]) HSP 1 Score: 162.54 bits (410), Expect = 7.607e-48 Identity = 84/149 (56.38%), Postives = 113/149 (75.84%), Query Frame = 0 Query: 24 LSEEKMKDIGLEPEQVEVLMKCFNGFC--KEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 L E ++D+GL+ EQV L K F+ F K+G + T G IL+MMGL+V E LK I+E++DEDGSG+LEFEEF +L+ARFL+EEDEE +++ELK+AFR YDK+ GY++ TLK IL EL+PKL +L I++E+DEDGSGT+DFD Sbjct: 4 LEPEFLEDVGLDKEQVLTLKKAFDAFDHEKKGAITTETTGTILRMMGLKVSHEGLKAIVEDIDEDGSGQLEFEEFVMLSARFLVEEDEEALKKELKDAFRIYDKERNGYITTGTLKEILHELDPKLTQEELNGIIEEIDEDGSGTVDFD 152
BLAST of troponin isoform 1 vs. nr
Match: gi|136030|sp|P21797.1|TNNC1_BALNU (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 156.377 bits (394), Expect = 1.945e-45 Identity = 81/146 (55.48%), Postives = 110/146 (75.34%), Query Frame = 0 Query: 27 EKMKDIGLEPEQVEVLMKCFNGFC--KEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 E ++ GLE EQ+ VL + F+ F K+G + TV +IL+MMG++V + K IIEE+DEDGSG++EF EF LAA+FLIEEDEE M +ELKEAFR YDK+G GY++ +TLK IL EL+ +L +L+ I++E+DEDGSGT+DFD Sbjct: 5 EYAEETGLEKEQIVVLRRAFDSFDRDKKGYISPETVSDILRMMGIKVSSTSFKQIIEEIDEDGSGQIEFSEFLQLAAKFLIEEDEEAMMKELKEAFRLYDKEGNGYITTQTLKEILHELDARLTAEELVGIIEEIDEDGSGTVDFD 150
BLAST of troponin isoform 1 vs. nr
Match: gi|239949539|gb|ACS36544.1| (troponin C isoform 4' [Homarus americanus]) HSP 1 Score: 155.992 bits (393), Expect = 2.328e-45 Identity = 83/140 (59.29%), Postives = 106/140 (75.71%), Query Frame = 0 Query: 33 GLEPEQVEVLMKCFNGFC--KEGVVLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 GL+ QVE L K F+ F K+G + TV IL+MMG+++ ++ L+++I EVDED SGELEFEEFC LAA+FLIEEDEE ++ ELKEAFR YDK G GY++ +TLK IL EL+ KL + L I+DEVDEDGSGT+DFD Sbjct: 8 GLDKVQVEGLRKAFDAFDTDKKGAISTDTVSTILRMMGVKISEKNLQEVISEVDEDDSGELEFEEFCALAAKFLIEEDEESLKTELKEAFRIYDKQGDGYITTQTLKEILRELDNKLTEEDLDGIIDEVDEDGSGTLDFD 147
BLAST of troponin isoform 1 vs. nr
Match: gi|317383200|gb|ADV17344.1| (troponin C [Penaeus monodon]) HSP 1 Score: 152.525 bits (384), Expect = 3.708e-44 Identity = 81/140 (57.86%), Postives = 105/140 (75.00%), Query Frame = 0 Query: 33 GLEPEQVEVLMKCFNGFCKEGV--VLAGTVGEILQMMGLRVKKEALKDIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRRELKEAFRFYDKDGVGYLSIETLKGILLELEPKLEDAQLMEIVDEVDEDGSGTIDFD 170 L+ EQ+E L K FN F EG + A TVG IL+MMG+++ ++ L+++I E DEDGSG LEFEEF LAA+FLIEEDEE ++ EL+EAFR YDKD GY++ + LK IL+EL+PKL L I++EVDEDGSGT+DFD Sbjct: 3 SLDEEQIETLRKAFNSFDTEGAGSINAETVGVILRMMGVKISEKNLQEVIAETDEDGSGMLEFEEFAELAAKFLIEEDEEALKAELREAFRIYDKDCQGYITTDILKEILVELDPKLTPTDLEGIIEEVDEDGSGTLDFD 142 The following BLAST results are available for this feature:
BLAST of troponin isoform 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 18
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BLAST of troponin isoform 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of troponin isoform 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold18_size714446:491765..494898+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold18_size714446-snap-gene-5.14 ID=maker-scaffold18_size714446-snap-gene-5.14|Name=troponin isoform 1|organism=Tigriopus kingsejongensis|type=gene|length=3134bp|location=Sequence derived from alignment at scaffold18_size714446:491765..494898+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'troponin isoform 1' has the following synonyms
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