sugar abc transporter permease, maker-scaffold1_size3401120-snap-gene-6.38 (gene) Tigriopus kingsejongensis

Overview


Name	sugar abc transporter permease
Unique Name	maker-scaffold1_size3401120-snap-gene-6.38
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of sugar abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000001342 (supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 gene:EMLSAG00000001342 transcript:EMLSAT00000001342 description:"snap_masked-LSalAtl2s1226-processed-gene-0.1")

HSP 1 Score: 83.5741 bits (205), Expect = 2.143e-17
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = 0

Query:   11 LLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRAD-GVTIILTTHYIEEAEAIADRVGVINGGRLLLVEDKDTLMAKMGEKQL 123
            +LK L +   +D ++  LSGG KRRV  A AL H+P +  LDEPT GVD  LRK +W  + +L  +   TI++TTHYIEEA   A  +G++  G+LL     + L+   GE  L
Sbjct:  146 ILKFLQITRDRD-MVGKLSGGQKRRVSFAAALLHDPELYILDEPTVGVDPRLRKSIWNHLTDLALNRKKTILITTHYIEEARQ-ATSIGLMRNGKLLAESSPEKLLQIYGEPSL 257

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BLAST of sugar abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000000736 (supercontig:LSalAtl2s:LSalAtl2s1118:20544:21383:1 gene:EMLSAG00000000736 transcript:EMLSAT00000000736 description:"augustus_masked-LSalAtl2s1118-processed-gene-0.6")

HSP 1 Score: 74.7146 bits (182), Expect = 2.800e-15
Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = 0

Query:   10 KLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGV---TIILTTHYIEEAEAIADRVGVINGGRLL 106
            K L +L    KK  ++  LSGG +RR  +A AL HEP +L LDEPT GVD  LR+++W  + ++  + +   TI++TTHY++EA   A+ VG++  GR+L
Sbjct:  144 KFLVELLELPKKKILIQKLSGGHQRRASLAVALLHEPDLLILDEPTVGVDPVLRRNIWGHLVDICNNPIRKTTIVVTTHYVDEARQ-ANMVGMMRFGRIL 242

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BLAST of sugar abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000000074 (supercontig:LSalAtl2s:LSalAtl2s100:66414:68636:-1 gene:EMLSAG00000000074 transcript:EMLSAT00000000074 description:"augustus_masked-LSalAtl2s100-processed-gene-0.5")

HSP 1 Score: 72.4034 bits (176), Expect = 7.697e-14
Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 0

Query:   24 ILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWK---IVEELRADGVTIILTTHYIEEAEAIADRVGVINGGRLLLVEDKDTLMAKMGE---KQLIVELREAVQQV 134
            ++ ++SGG +RR+ +A AL HEP +L LDEPT GVD  LR+ +W     +    +   TII+TTHY+EEA   A  VG++  G++L  +    L+ K      +++  EL +  Q+V
Sbjct:  154 LVQNMSGGQRRRISLAVALLHEPELLVLDEPTVGVDPVLRQYIWDHLLTIVNNSSKKRTIIITTHYVEEARQ-AHIVGMLRYGKILDEDAPTKLLEKFKALTLEEVFYELCQQEQRV 269

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BLAST of sugar abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000001147 (supercontig:LSalAtl2s:LSalAtl2s118:91392:124552:1 gene:EMLSAG00000001147 transcript:EMLSAT00000001147 description:"maker-LSalAtl2s118-snap-gene-1.27")

HSP 1 Score: 63.5438 bits (153), Expect = 4.800e-11
Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 0

Query:   34 RRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGVTIILTTHYIEEAEAIADRVGVINGGRLL 106
            RR L+  +     RV+ LDEPTAGVD   R+ +W I+   +  G TIILTTH+++EA+ + DR+ +I+ G+L+
Sbjct:  503 RRYLVGGS-----RVIILDEPTAGVDPFSRRSIWDILIRYKT-GRTIILTTHFMDEADLLGDRIAIISEGKLI 569

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BLAST of sugar abc transporter permease vs. SwissProt
Match: gi|84027834|sp|P0AFN8.1|YADH_ECO57 (RecName: Full=Inner membrane transport permease YadH >gi|84027835|sp|P0AFN7.1|YADH_ECOL6 RecName: Full=Inner membrane transport permease YadH >gi|84027836|sp|P0AFN6.1|YADH_ECOLI RecName: Full=Inner membrane transport permease YadH >gi|84027837|sp|P0AFN9.1|YADH_SHIFL RecName: Full=Inner membrane transport permease YadH)

HSP 1 Score: 174.866 bits (442), Expect = 1.620e-50
Identity = 90/249 (36.14%), Postives = 151/249 (60.64%), Query Frame = 0

Query:  204 AVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            A+K I+  E+ R     +Q++  PVI+  LYF++FG  IGSRI  + G  Y  FIVPG++M+S++T + +N +   +  KF   I E+L AP+    I+ GYVG    +   +G+++   + FFV  ++   V++    +LT + F+L G + GV+A  F+ + LVP  ++TPL +LGG FYS+++LPP WQ ++  NP++Y++SGFR+ F G+ DVP+  +  ++  F+    L+   + + G  LR 
Sbjct:    8 ALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS 256

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BLAST of sugar abc transporter permease vs. SwissProt
Match: gi|549484|sp|P36879.1|YADG_ECOLI (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YadG)

HSP 1 Score: 130.954 bits (328), Expect = 2.020e-33
Identity = 79/192 (41.15%), Postives = 113/192 (58.85%), Query Frame = 0

Query:    3 KDPAYL--EKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGVTIILTTHYIEEAEAIADRVGVINGGRLLLVEDKDTLMAKMGEKQLIVELREAVQQVPES----LAKYNLELATDGGKLTYSYDVRGERTGITALLQDLSDAGLGVKDIVTQFSR 188
            +  AY+  EK LKQL LW K++     LSGGMKRR++IA+AL HEP++L LDEPTAGVD+ELR+ MW  +++L   G TIILTTHY+EEAE +   +G+I  G L+       L+AK+  +  I++L       P+S    L  Y   L       T   +V  E+ GI ++   LS+ G+ V  +  + +R
Sbjct:  110 RKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDL------APKSPLPKLDGYQYRLVDTA---TLEVEVLREQ-GINSVFTQLSEQGIQVLSMRNKANR 291

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BLAST of sugar abc transporter permease vs. SwissProt
Match: gi|75018031|sp|Q8T6J0.1|ABCA7_DICDI (RecName: Full=ABC transporter A family member 7; AltName: Full=ABC transporter ABCA.7)

HSP 1 Score: 103.99 bits (258), Expect = 1.672e-22
Identity = 51/135 (37.78%), Postives = 86/135 (63.70%), Query Frame = 0

Query:    9 EKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGVTIILTTHYIEEAEAIADRVGVINGGRLLLVEDKDTLMAKMGEKQLI-VELREAVQQV--PESLAK 140
              +LK+++L D KD  +  LSGGMKRR+  A A++ E  ++FLDEPT G+ +E RKD+W  + EL+ +  +IILTTH ++EA+ ++DR+ +++ G+L  +  +  L  K G+   + ++++E  Q    P  L K
Sbjct:  639 HNILKEVNLLDVKDRFVKELSGGMKRRLSFAIAMTGESSIIFLDEPTTGLSIETRKDLWGTINELKKNR-SIILTTHSMQEADILSDRIAIVSQGKLQCIGTQTHLKQKFGDGYSVRIDIQEDYQNTHNPTDLIK 772

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BLAST of sugar abc transporter permease vs. SwissProt
Match: gi|74996515|sp|Q54DT1.1|ABCA9_DICDI (RecName: Full=ABC transporter A family member 9; AltName: Full=ABC transporter ABCA.9)

HSP 1 Score: 103.99 bits (258), Expect = 2.051e-22
Identity = 44/113 (38.94%), Postives = 82/113 (72.57%), Query Frame = 0

Query:    8 LEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGVTIILTTHYIEEAEAIADRVGVINGGRLLLVEDKDTLMAKMGE 120
            +E +LK+++L++ K+ ++  LSGGMKRR+  A A++ +  ++FLDEP+ G+  ELR+D+W+ + +L+ +  +IILTTH +EEA+ ++ R+ +I+ G+L  +  ++ L AK G+
Sbjct:  644 VESILKEVNLFEVKERLVKELSGGMKRRLSFAVAMTGDSSIIFLDEPSTGISSELRRDLWRTINDLKKNR-SIILTTHSMEEADVLSSRIAIISQGKLQCIGTQNHLKAKFGD 755

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BLAST of sugar abc transporter permease vs. SwissProt
Match: gi|239938767|sp|P94440.2|YFIL_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YfiL)

HSP 1 Score: 93.5893 bits (231), Expect = 4.476e-20
Identity = 42/115 (36.52%), Postives = 75/115 (65.22%), Query Frame = 0

Query:   10 KLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGVTIILTTHYIEEAEAIADRVGVINGGRLLLVEDKDTLMAKMGEKQLI 124
            ++L+ + L ++  + +   SGGMKRR+ I  AL H+P +L +DEPT G+D + R  + + V++L   G+T+I T+HY+EE E + DR+G+I+ G ++ +  K  L +++G   +I
Sbjct:  115 EVLEYVGLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNETGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLGGDTII 229

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BLAST of sugar abc transporter permease vs. SwissProt
Match: gi|124015175|sp|Q39GT7.2|NODI_BURL3 (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I)

HSP 1 Score: 93.5893 bits (231), Expect = 4.652e-20
Identity = 48/99 (48.48%), Postives = 68/99 (68.69%), Query Frame = 0

Query:    6 AYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGVTIILTTHYIEEAEAIADRVGVINGGR 104
            A ++ LL+   L +K D  +  LSGGMKRR+ +A+AL ++P VL LDEPT G+D + R  MW+ +  L A G TI++TTH++EEAE + DR+ VI  GR
Sbjct:  115 ALVKPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTHFMEEAERLCDRLCVIEEGR 213

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BLAST of sugar abc transporter permease vs. SwissProt
Match: gi|399405|sp|P32010.1|DRRA_STRPE (RecName: Full=Daunorubicin/doxorubicin resistance ATP-binding protein DrrA)

HSP 1 Score: 93.2041 bits (230), Expect = 8.100e-20
Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 0

Query:   10 KLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGVTIILTTHYIEEAEAIADRVGVINGGRLLLVEDKDTLMAKMGEKQLIVELREAVQQV-PESL--AKYNLELATDGGKLTYSYDVRGERTGITALLQ 170
            +L+    L D +D +L   SGGM+RR+ IA ++   P +LFLDEPT G+D   R  +W IV  L   G T++LTT Y++EA+ +ADR+ VI+ GR++       L + +G   L + L +A  +   E L  A+  + +  D      S  +   R G+ AL +
Sbjct:  122 ELIDGFGLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIVRALVDAGTTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGELKSSLGSNVLRLRLHDAQSRAEAERLLSAELGVTIHRDSDPTALSARIDDPRQGMRALAE 285

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BLAST of sugar abc transporter permease vs. SwissProt
Match: gi|122978951|sp|Q1BWI2.1|NODI_BURCA (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I)

HSP 1 Score: 92.8189 bits (229), Expect = 8.200e-20
Identity = 48/99 (48.48%), Postives = 67/99 (67.68%), Query Frame = 0

Query:    6 AYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGVTIILTTHYIEEAEAIADRVGVINGGR 104
            A +  LL+   L +K D  +  LSGGMKRR+ +A+AL ++P VL LDEPT G+D + R  MW+ +  L A G TI++TTH++EEAE + DR+ VI  GR
Sbjct:  115 ALVAPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTHFMEEAERLCDRLCVIEEGR 213

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BLAST of sugar abc transporter permease vs. SwissProt
Match: gi|124015172|sp|Q62K72.2|NODI_BURMA (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I >gi|124015173|sp|Q3JSQ0.2|NODI_BURP1 RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I)

HSP 1 Score: 89.7373 bits (221), Expect = 8.641e-19
Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 0

Query:    6 AYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGVTIILTTHYIEEAEAIADRVGVINGGR 104
            A +  LL+   L  K D  +  LSGGMKRR+ +A+AL ++P VL LDEPT G+D + R  MW+ +  L A G TI+LTTH++EEAE +  R+ VI  GR
Sbjct:  115 ALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCHRLCVIEEGR 213

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BLAST of sugar abc transporter permease vs. SwissProt
Match: gi|124015174|sp|Q63TX3.2|NODI_BURPS (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I)

HSP 1 Score: 89.7373 bits (221), Expect = 8.641e-19
Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 0

Query:    6 AYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRKDMWKIVEELRADGVTIILTTHYIEEAEAIADRVGVINGGR 104
            A +  LL+   L  K D  +  LSGGMKRR+ +A+AL ++P VL LDEPT G+D + R  MW+ +  L A G TI+LTTH++EEAE +  R+ VI  GR
Sbjct:  115 ALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCHRLCVIEEGR 213

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BLAST of sugar abc transporter permease vs. nr
Match: gi|1067243299|gb|OED36339.1| (sugar ABC transporter permease [Chromatiales bacterium (ex Bugula neritina AB1)])

HSP 1 Score: 437.187 bits (1123), Expect = 1.934e-150
Identity = 210/253 (83.00%), Postives = 237/253 (93.68%), Query Frame = 0

Query:  200 MNLHAVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            MN HA++VIY  EMLRTWNTLLQSIASPVIST+LYFVVFGAAIGSRIE+VEGV YGSFIVPG++MLSLLTQSISNASFGIYFPKFTGTIYE+LSAP+SF+EI+LG+VGAAATKS IIG IIL TAGFFVEL+I HP+WM++F ILTCITF+LFGFIIG+WADNFEKLQL+P+L++TPLVFLGGSFYS+SMLPPLWQKITLFNPVLYL+SGFRWSFF VADV VG S+AMI  FLA+CL +V WMFKTGYK+RQ
Sbjct:    1 MNWHAIRVIYKFEMLRTWNTLLQSIASPVISTSLYFVVFGAAIGSRIETVEGVSYGSFIVPGLIMLSLLTQSISNASFGIYFPKFTGTIYEILSAPLSFIEIVLGFVGAAATKSLIIGAIILATAGFFVELKIAHPIWMLTFLILTCITFSLFGFIIGIWADNFEKLQLIPLLVITPLVFLGGSFYSVSMLPPLWQKITLFNPVLYLISGFRWSFFEVADVSVGLSIAMILIFLAICLSIVWWMFKTGYKIRQ 253

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BLAST of sugar abc transporter permease vs. nr
Match: gi|551334819|ref|WP_022954256.1| (ABC transporter permease [Leucothrix mucor])

HSP 1 Score: 420.624 bits (1080), Expect = 6.317e-144
Identity = 198/253 (78.26%), Postives = 231/253 (91.30%), Query Frame = 0

Query:  200 MNLHAVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            MN  A+KVIY NEM+R WNTLLQSIASPVIST LYFVVFG AIG RI+ V+GVPYGSFIVPG++MLSLLTQSISNASFGI+FPKFTGTIYEV+SAPISF+EIL+GYVGAAATKS IIGVIIL+TA FFV+L+I HPVWM++F +LTC++F+LFGFIIG+WA NFEKLQL+P+L++TPLVFLGGSFYS+SMLPP WQ +TLFNPVLYL+SGFRWSFFGV+DV VG SL MI  FL +C+ +VAWMFKTGY+L+Q
Sbjct:    1 MNYQAIKVIYNNEMMRAWNTLLQSIASPVISTCLYFVVFGGAIGGRIQEVDGVPYGSFIVPGLVMLSLLTQSISNASFGIFFPKFTGTIYEVMSAPISFIEILIGYVGAAATKSLIIGVIILVTASFFVDLQIQHPVWMVAFLLLTCVSFSLFGFIIGLWATNFEKLQLIPLLVITPLVFLGGSFYSVSMLPPAWQTVTLFNPVLYLISGFRWSFFGVSDVSVGMSLFMIMLFLGICMAIVAWMFKTGYRLKQ 253

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BLAST of sugar abc transporter permease vs. nr
Match: gi|931402808|gb|KPJ91172.1| (sugar ABC transporter permease [Gammaproteobacteria bacterium SG8_11])

HSP 1 Score: 411.764 bits (1057), Expect = 1.554e-140
Identity = 198/253 (78.26%), Postives = 230/253 (90.91%), Query Frame = 0

Query:  200 MNLHAVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            MNL+A++VIY  EMLR W T+LQS ASPVISTALYFVVFG+AIGSRIE++EGV YG+FIVPG+MML+LLTQSI+NASFGI+FPKFTGTIYE++SAPISFVEIL+GYVGAAATKS IIG+IIL TAGFFV L I HP+WMM F ILTC++F+LFGFIIG+WA NFEKLQL+PML++TPLVFLGGSFYSI+MLPP WQ ITLFNPV+YL+SGFRWSFF +ADV VG SLAM+  FL VCLL+V WMFKTGY+L+Q
Sbjct:    1 MNLYAIRVIYKFEMLRAWETILQSFASPVISTALYFVVFGSAIGSRIETIEGVSYGTFIVPGLMMLALLTQSIANASFGIFFPKFTGTIYEIMSAPISFVEILIGYVGAAATKSLIIGLIILGTAGFFVPLEIAHPLWMMGFLILTCVSFSLFGFIIGLWATNFEKLQLIPMLVITPLVFLGGSFYSINMLPPAWQTITLFNPVVYLISGFRWSFFEIADVSVGVSLAMVLVFLGVCLLIVWWMFKTGYRLKQ 253

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BLAST of sugar abc transporter permease vs. nr
Match: gi|1247530427|gb|PCJ85776.1| (sugar ABC transporter permease [Thiotrichaceae bacterium])

HSP 1 Score: 409.838 bits (1052), Expect = 9.212e-140
Identity = 195/253 (77.08%), Postives = 228/253 (90.12%), Query Frame = 0

Query:  200 MNLHAVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            MN+ A+KVIY  EMLR W T+LQS  SPVISTALYFVVFG+AIGSRI+ +EGVPYG FIVPG+MML+LLTQSI+NASFGI+FPKFTGTIYEV+SAPIS+VEIL+GYVGAAATKS IIG IIL TAGFFV L I HP+WM+SF ILTCITF+LFGFIIG+WADNFEKLQL+PMLI+TPLVFLGGSFYS+SMLPP+WQ +TLFNP++YL+SGFRWSFF VADV V  SLA++  FL +CL+++ WMFKTGY+L+Q
Sbjct:    1 MNIQAIKVIYKYEMLRAWETMLQSFVSPVISTALYFVVFGSAIGSRIQEIEGVPYGLFIVPGLMMLALLTQSIANASFGIFFPKFTGTIYEVMSAPISYVEILIGYVGAAATKSIIIGFIILGTAGFFVPLEIAHPIWMLSFLILTCITFSLFGFIIGLWADNFEKLQLIPMLIITPLVFLGGSFYSVSMLPPVWQTVTLFNPIVYLISGFRWSFFEVADVSVEVSLAVVILFLILCLMIIGWMFKTGYRLKQ 253

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BLAST of sugar abc transporter permease vs. nr
Match: gi|1043113658|ref|WP_065353255.1| (ABC transporter permease [Candidatus Thioglobus singularis] >gi|1042807255|gb|ANQ66152.1| sugar ABC transporter permease [Candidatus Thioglobus singularis])

HSP 1 Score: 409.838 bits (1052), Expect = 1.134e-139
Identity = 192/253 (75.89%), Postives = 227/253 (89.72%), Query Frame = 0

Query:  200 MNLHAVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            MN  A+KVIY+NEM+R WNTL QS+ASPVISTALYFVVFG+AIGSR+E++EGV YG FIVPG+ MLS+LTQSISNASFGI+FPKFTGTIYE+LSAP+SF E L+GYVGAAATKS I+  IIL+TA  FV+L I HP WM+SF +LTC+ F+LFGFIIG+WADNFEKLQ++P+LI+TPLVFLGGSFYSISMLP LWQK+TLFNPVLYLVSGFRWSFF V+DV VG SL+M+  FLA+C+ +VAWMF+TGYKL+Q
Sbjct:    1 MNFTAIKVIYFNEMMRFWNTLFQSVASPVISTALYFVVFGSAIGSRMENIEGVSYGLFIVPGLTMLSVLTQSISNASFGIFFPKFTGTIYELLSAPVSFYETLIGYVGAAATKSLILATIILVTANLFVDLNIAHPFWMLSFLVLTCVAFSLFGFIIGLWADNFEKLQIIPLLIITPLVFLGGSFYSISMLPELWQKVTLFNPVLYLVSGFRWSFFEVSDVSVGISLSMVFLFLAICIAIVAWMFRTGYKLKQ 253

[Close]

BLAST of sugar abc transporter permease vs. nr
Match: gi|927545169|ref|WP_053819704.1| (ABC transporter permease [Candidatus Thioglobus singularis] >gi|927289274|gb|ALE01483.1| sugar ABC transporter permease [Candidatus Thioglobus singularis PS1])

HSP 1 Score: 408.683 bits (1049), Expect = 3.233e-139
Identity = 192/253 (75.89%), Postives = 226/253 (89.33%), Query Frame = 0

Query:  200 MNLHAVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            MN  A+KVIY+NEM+R WNTL QS+ASPVISTALYFVVFG+AIGSR+E++EGV YG FIVPG+ MLS+LTQSISNASFGI+FPKFTGTIYE+LSAP+SF E L+GYVGAAATKS I+  IIL+TA  FV+L I HP WM+SF +LTC+ F+LFGFIIG+WADNFEKLQ++P+LI+TPLVFLGGSFYSISMLP LWQK+TLFNPVLYLVSGFRWSFF V+DV VG SL M+  FLA+C+ +VAWMF+TGYKL+Q
Sbjct:    1 MNFTAIKVIYFNEMMRFWNTLFQSVASPVISTALYFVVFGSAIGSRMENIEGVSYGLFIVPGLTMLSVLTQSISNASFGIFFPKFTGTIYELLSAPVSFYETLIGYVGAAATKSLILATIILVTANLFVDLNIAHPFWMLSFLVLTCVAFSLFGFIIGLWADNFEKLQIIPLLIITPLVFLGGSFYSISMLPELWQKVTLFNPVLYLVSGFRWSFFEVSDVSVGISLLMVFLFLAICIAIVAWMFRTGYKLKQ 253

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BLAST of sugar abc transporter permease vs. nr
Match: gi|1273646552|gb|PID47235.1| (sugar ABC transporter permease [Proteobacteria bacterium])

HSP 1 Score: 402.134 bits (1032), Expect = 9.133e-137
Identity = 190/253 (75.10%), Postives = 222/253 (87.75%), Query Frame = 0

Query:  200 MNLHAVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            MN  A++ IY+NEMLR W TLLQ+IASPV+ST LYFVVFG+AIG RI+ ++GVPYGSFIVPG+MMLSLLTQSISNASFGIYFPKFTGTIYEV+SAPISF E+L+GYVGAAA+KS IIG IIL TAGFFV+L I HP+WM++F ILTCI+F+LFGFIIG+WA +FEKLQLVPML++TPLVFLGG+FYS+SMLPP WQK+TL NPVLYLVSGFRWSFFG  DV +  S  M+  FL +C  +V WMFKTGY+LRQ
Sbjct:    1 MNFQAIRAIYFNEMLRAWKTLLQTIASPVLSTCLYFVVFGSAIGGRIQEIDGVPYGSFIVPGLMMLSLLTQSISNASFGIYFPKFTGTIYEVMSAPISFFEVLIGYVGAAASKSLIIGAIILFTAGFFVDLEIQHPLWMVTFLILTCISFSLFGFIIGLWATSFEKLQLVPMLVITPLVFLGGTFYSVSMLPPFWQKLTLLNPVLYLVSGFRWSFFGAGDVSIVTSFVMVLVFLTLCFGIVWWMFKTGYRLRQ 253

[Close]

BLAST of sugar abc transporter permease vs. nr
Match: gi|1214907790|ref|WP_088917796.1| (ABC transporter permease [Granulosicoccus antarcticus])

HSP 1 Score: 399.823 bits (1026), Expect = 9.755e-136
Identity = 194/253 (76.68%), Postives = 223/253 (88.14%), Query Frame = 0

Query:  200 MNLHAVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            MN+ A+K IY+NEM RT  TL+QSIASPVIST LYFVVFG+AIGSRIESVEGV YGSFIVPG++MLSLLTQSISNASFGI+FPKFTGT+YE++SAPISF E+L+GYVGAAATKS IIGVIIL TA FFV+L I HPVWM+ F ++TC+ F+LFGFIIG+WADNFEKLQL+P+L++TPLVFLGGSFYS+SMLP  WQK+TL NPVLYLVSGFRWSFF V+DV V  SL MI  FL  CLL+V  MFKTGYKL+Q
Sbjct:    1 MNVQAIKAIYFNEMARTRKTLMQSIASPVISTVLYFVVFGSAIGSRIESVEGVSYGSFIVPGLIMLSLLTQSISNASFGIFFPKFTGTVYEIMSAPISFFEVLVGYVGAAATKSLIIGVIILATASFFVDLHIAHPVWMVFFLLMTCVAFSLFGFIIGLWADNFEKLQLIPLLVITPLVFLGGSFYSVSMLPEFWQKVTLLNPVLYLVSGFRWSFFEVSDVSVTLSLLMITGFLLACLLIVWAMFKTGYKLKQ 253

[Close]

BLAST of sugar abc transporter permease vs. nr
Match: gi|1214623896|gb|ASJ72490.1| (Inner membrane transport permease YadH [Granulosicoccus antarcticus IMCC3135])

HSP 1 Score: 399.823 bits (1026), Expect = 1.025e-135
Identity = 194/253 (76.68%), Postives = 223/253 (88.14%), Query Frame = 0

Query:  200 MNLHAVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            MN+ A+K IY+NEM RT  TL+QSIASPVIST LYFVVFG+AIGSRIESVEGV YGSFIVPG++MLSLLTQSISNASFGI+FPKFTGT+YE++SAPISF E+L+GYVGAAATKS IIGVIIL TA FFV+L I HPVWM+ F ++TC+ F+LFGFIIG+WADNFEKLQL+P+L++TPLVFLGGSFYS+SMLP  WQK+TL NPVLYLVSGFRWSFF V+DV V  SL MI  FL  CLL+V  MFKTGYKL+Q
Sbjct:    3 MNVQAIKAIYFNEMARTRKTLMQSIASPVISTVLYFVVFGSAIGSRIESVEGVSYGSFIVPGLIMLSLLTQSISNASFGIFFPKFTGTVYEIMSAPISFFEVLVGYVGAAATKSLIIGVIILATASFFVDLHIAHPVWMVFFLLMTCVAFSLFGFIIGLWADNFEKLQLIPLLVITPLVFLGGSFYSVSMLPEFWQKVTLLNPVLYLVSGFRWSFFEVSDVSVTLSLLMITGFLLACLLIVWAMFKTGYKLKQ 255

[Close]

BLAST of sugar abc transporter permease vs. nr
Match: gi|1232291417|gb|OYV76649.1| (sugar ABC transporter permease [Chromatiales bacterium 21-64-14])

HSP 1 Score: 397.897 bits (1021), Expect = 5.778e-135
Identity = 188/253 (74.31%), Postives = 226/253 (89.33%), Query Frame = 0

Query:  200 MNLHAVKVIYYNEMLRTWNTLLQSIASPVISTALYFVVFGAAIGSRIESVEGVPYGSFIVPGMMMLSLLTQSISNASFGIYFPKFTGTIYEVLSAPISFVEILLGYVGAAATKSFIIGVIILITAGFFVELRILHPVWMMSFFILTCITFALFGFIIGVWADNFEKLQLVPMLIVTPLVFLGGSFYSISMLPPLWQKITLFNPVLYLVSGFRWSFFGVADVPVGWSLAMIGFFLAVCLLVVAWMFKTGYKLRQ 452
            MN +AV+VIY +EMLR W TLLQS ASPV+ST+LYFVVFG+AIGSRIE VEGVP+G FIVPG+MML+LLTQSI+NASFGI+FPKFTG IYEV+SAP+SF EILLGYVGAAATKS IIG+IIL+TA FFV LRI HPVWM +F ILTC++F+LFGFIIG+WA +FEKLQL+P+L++TPLVFLGGSFYS+SMLPP W+ +TLFNPV+YL+SGFRWSFF V+DV V  SL+++  FL +CL+ V WMFKTGY+L+Q
Sbjct:    1 MNTYAVRVIYKHEMLRAWETLLQSFASPVLSTSLYFVVFGSAIGSRIEQVEGVPFGLFIVPGLMMLALLTQSIANASFGIFFPKFTGAIYEVMSAPVSFFEILLGYVGAAATKSLIIGLIILVTASFFVPLRIAHPVWMAAFLILTCVSFSLFGFIIGLWASDFEKLQLIPLLVITPLVFLGGSFYSVSMLPPAWRTVTLFNPVVYLISGFRWSFFEVSDVSVALSLSVVMAFLVLCLVTVWWMFKTGYRLKQ 253

The following BLAST results are available for this feature:

BLAST of sugar abc transporter permease vs. L. salmonis genes
BLAST of sugar abc transporter permease vs. SwissProt
BLAST of sugar abc transporter permease vs. nr

BLAST of sugar abc transporter permease vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 4


Match Name	E-value	Identity	Description
EMLSAG00000001342	2.143e-17	42.98	supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 ...	[more]
EMLSAG00000000736	2.800e-15	43.00	supercontig:LSalAtl2s:LSalAtl2s1118:20544:21383:1 ...	[more]
EMLSAG00000000074	7.697e-14	37.61	supercontig:LSalAtl2s:LSalAtl2s100:66414:68636:-1 ...	[more]
EMLSAG00000001147	4.800e-11	43.84	supercontig:LSalAtl2s:LSalAtl2s118:91392:124552:1 ...	[more]

BLAST of sugar abc transporter permease vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|84027834\|sp\|P0AFN8.1\|YADH_ECO57	1.620e-50	36.14	RecName: Full=Inner membrane transport permease Ya...	[more]
gi\|549484\|sp\|P36879.1\|YADG_ECOLI	2.020e-33	41.15	RecName: Full=Uncharacterized ABC transporter ATP-...	[more]
gi\|75018031\|sp\|Q8T6J0.1\|ABCA7_DICDI	1.672e-22	37.78	RecName: Full=ABC transporter A family member 7; A...	[more]
gi\|74996515\|sp\|Q54DT1.1\|ABCA9_DICDI	2.051e-22	38.94	RecName: Full=ABC transporter A family member 9; A...	[more]
gi\|239938767\|sp\|P94440.2\|YFIL_BACSU	4.476e-20	36.52	RecName: Full=Uncharacterized ABC transporter ATP-...	[more]
gi\|124015175\|sp\|Q39GT7.2\|NODI_BURL3	4.652e-20	48.48	RecName: Full=Nod factor export ATP-binding protei...	[more]
gi\|399405\|sp\|P32010.1\|DRRA_STRPE	8.100e-20	34.76	RecName: Full=Daunorubicin/doxorubicin resistance ...	[more]
gi\|122978951\|sp\|Q1BWI2.1\|NODI_BURCA	8.200e-20	48.48	RecName: Full=Nod factor export ATP-binding protei...	[more]
gi\|124015172\|sp\|Q62K72.2\|NODI_BURMA	8.641e-19	48.48	RecName: Full=Nod factor export ATP-binding protei...	[more]
gi\|124015174\|sp\|Q63TX3.2\|NODI_BURPS	8.641e-19	48.48	RecName: Full=Nod factor export ATP-binding protei...	[more]

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BLAST of sugar abc transporter permease vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1067243299\|gb\|OED36339.1\|	1.934e-150	83.00	sugar ABC transporter permease [Chromatiales bacte...	[more]
gi\|551334819\|ref\|WP_022954256.1\|	6.317e-144	78.26	ABC transporter permease [Leucothrix mucor]	[more]
gi\|931402808\|gb\|KPJ91172.1\|	1.554e-140	78.26	sugar ABC transporter permease [Gammaproteobacteri...	[more]
gi\|1247530427\|gb\|PCJ85776.1\|	9.212e-140	77.08	sugar ABC transporter permease [Thiotrichaceae bac...	[more]
gi\|1043113658\|ref\|WP_065353255.1\|	1.134e-139	75.89	ABC transporter permease [Candidatus Thioglobus si...	[more]
gi\|927545169\|ref\|WP_053819704.1\|	3.233e-139	75.89	ABC transporter permease [Candidatus Thioglobus si...	[more]
gi\|1273646552\|gb\|PID47235.1\|	9.133e-137	75.10	sugar ABC transporter permease [Proteobacteria bac...	[more]
gi\|1214907790\|ref\|WP_088917796.1\|	9.755e-136	76.68	ABC transporter permease [Granulosicoccus antarcti...	[more]
gi\|1214623896\|gb\|ASJ72490.1\|	1.025e-135	76.68	Inner membrane transport permease YadH [Granulosic...	[more]
gi\|1232291417\|gb\|OYV76649.1\|	5.778e-135	74.31	sugar ABC transporter permease [Chromatiales bacte...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1_size3401120	supercontig	scaffold1_size3401120:675760..677123 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold1_size3401120-snap-gene-6.38-mRNA-1	maker-scaffold1_size3401120-snap-gene-6.38-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1_size3401120:675760..677123+

gene from alignment at scaffold1_size3401120:675760..677123+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold1_size3401120-snap-gene-6.38 ID=maker-scaffold1_size3401120-snap-gene-6.38|Name=sugar abc transporter permease|organism=Tigriopus kingsejongensis|type=gene|length=1364bp|location=Sequence derived from alignment at scaffold1_size3401120:675760..677123+ (Tigriopus kingsejongensis)
ATGCCGAAAGACCCGGCCTATCTAGAGAAACTGCTGAAGCAGCTCTCTTT
GTGGGACAAAAAAGACAATATCCTGATGCATCTATCCGGTGGCATGAAGC
GCCGGGTACTGATCGCCAAAGCCTTGTCGCATGAGCCACGGGTGTTGTTT
CTCGATGAGCCCACGGCGGGCGTAGACGTCGAACTGCGCAAAGACATGTG
GAAGATCGTCGAAGAGCTGCGCGCCGACGGTGTCACCATTATTTTGACCA
CGCACTATATAGAAGAGGCCGAGGCCATTGCCGATCGTGTGGGCGTGATC
AATGGGGGCCGACTGTTGTTGGTGGAAGACAAAGACACGCTCATGGCCAA
GATGGGTGAGAAGCAGCTGATTGTGGAGCTGCGCGAGGCGGTGCAGCAAG
TGCCTGAGTCTTTGGCGAAGTACAACTTAGAGCTAGCCACCGACGGTGGC
AAGCTCACCTACAGTTACGATGTGCGCGGAGAGCGCACGGGTATCACGGC
ACTGTTGCAGGACCTCAGTGATGCGGGACTTGGCGTGAAGGATATCGTCA
CGCGTCAGAGTTCTCTCGAAGAAATATTCGTCAACCTAGTGGAGGAGAGT
GCATGAACCTGCACGCGGTCAAAGTCATCTATTACAACGAGATGCTACGC
ACCTGGAATACTCTGCTGCAGAGCATTGCCTCGCCCGTGATCTCCACTGC
TTTGTATTTTGTGGTGTTTGGTGCGGCGATAGGCTCGCGCATTGAATCTG
TTGAGGGTGTGCCTTACGGCTCGTTTATCGTGCCGGGAATGATGATGTTA
TCGCTGCTGACGCAGAGTATTTCTAATGCGTCGTTTGGTATCTACTTCCC
TAAGTTCACCGGCACCATCTACGAGGTGCTGTCTGCGCCGATCTCTTTTG
TGGAGATATTGCTGGGTTATGTCGGGGCAGCGGCCACCAAATCCTTCATC
ATCGGTGTGATCATTCTCATCACCGCGGGATTTTTTGTTGAGCTGCGCAT
CCTGCACCCGGTCTGGATGATGTCTTTCTTTATCCTGACTTGCATTACCT
TTGCCTTGTTCGGTTTTATTATTGGTGTATGGGCAGATAATTTTGAGAAG
CTTCAATTGGTGCCCATGCTGATTGTGACACCTCTGGTATTTCTCGGGGG
CAGCTTCTATTCCATCAGTATGTTGCCGCCCCTGTGGCAGAAAATCACGC
TGTTCAACCCTGTGTTGTATTTGGTCAGTGGGTTTCGCTGGAGTTTTTTC
GGTGTGGCAGATGTGCCCGTTGGCTGGAGCCTAGCGATGATCGGCTTCTT
CTTGGCTGTTTGTCTTTTGGTGGTCGCGTGGATGTTTAAGACCGGCTACA
AGTTACGTCAGTAA

Synonyms

The feature 'sugar abc transporter permease' has the following synonyms


Synonym
Tk04866

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