splicing arginine serine-rich 7, maker-scaffold2012_size22666-snap-gene-0.17 (gene) Tigriopus kingsejongensis

Overview
Namesplicing arginine serine-rich 7
Unique Namemaker-scaffold2012_size22666-snap-gene-0.17
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Match: EMLSAG00000009270 (supercontig:LSalAtl2s:LSalAtl2s591:151036:155497:-1 gene:EMLSAG00000009270 transcript:EMLSAT00000009270 description:"maker-LSalAtl2s591-augustus-gene-1.13")

HSP 1 Score: 89.7373 bits (221), Expect = 1.030e-20
Identity = 35/69 (50.72%), Postives = 55/69 (79.71%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISR 77
            K++IGN++E +RKSELR EFEKFGE+ D+++++G+A +TY +  ++  AI  MDG ++ G KLRVE+S+
Sbjct:    4 KIYIGNLNETIRKSELRQEFEKFGEISDLFVNHGFAHLTYVDTRSSEDAIRIMDGEVFFGSKLRVEMSQ 72
[Close]
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Match: EMLSAG00000009359 (supercontig:LSalAtl2s:LSalAtl2s599:215116:228556:-1 gene:EMLSAG00000009359 transcript:EMLSAT00000009359 description:"maker-LSalAtl2s599-augustus-gene-2.23")

HSP 1 Score: 55.8398 bits (133), Expect = 8.833e-9
Identity = 22/78 (28.21%), Postives = 45/78 (57.69%), Query Frame = 0 
Query:    7 GCKVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDK 84
            GC+V +G +  +  +S++R  F K+ +  D+ +   +AF+ +     A  A+  +DG+ + G ++ VE++RG   +DK
Sbjct:   37 GCRVXVGXLPXDTSRSDIRDIFSKYRDRFDMKLKTRFAFIEFDYHRDADHAVDNLDGLTFRGRRISVEVARGPRTADK 114
[Close]
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Match: EMLSAG00000007347 (supercontig:LSalAtl2s:LSalAtl2s4162:3600:4079:1 gene:EMLSAG00000007347 transcript:EMLSAT00000007347 description:"augustus_masked-LSalAtl2s4162-processed-gene-0.0")

HSP 1 Score: 51.9878 bits (123), Expect = 1.749e-8
Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0 
Query:    4 AEPGCKVFIGNIHENVRKSELRSEFEKFGEVLDVYISN-GYAFVTYGEASAASSAISEMDGIMYMGEKLRVEIS 76
            +E   K+F+  + +   +S L  EF K G V DVYI+  GYAFVT   +  A  A  +++G    G++L+VEI+
Sbjct:    3 SEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA 76
[Close]
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Match: EMLSAG00000005475 (supercontig:LSalAtl2s:LSalAtl2s294:4530:9586:-1 gene:EMLSAG00000005475 transcript:EMLSAT00000005475 description:"maker-LSalAtl2s294-augustus-gene-0.9")

HSP 1 Score: 53.5286 bits (127), Expect = 3.189e-8
Identity = 24/73 (32.88%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:    7 GCKVFIGNIHENVRKSELRSEFEKFGEVLDVYISNG-YAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRG 78
            GC+VF+GN+  +VR+ ++   FE++G V +++I +G Y F  + +   A  A+ +++G     E++ VE +RG
Sbjct:   39 GCRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYRDADDAVYKLNGCELNSERITVEHARG 111
[Close]
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Match: EMLSAG00000002556 (supercontig:LSalAtl2s:LSalAtl2s1510:24535:24822:1 gene:EMLSAG00000002556 transcript:EMLSAT00000002556 description:"augustus_masked-LSalAtl2s1510-processed-gene-0.4")

HSP 1 Score: 49.6766 bits (117), Expect = 3.826e-8
Identity = 27/69 (39.13%), Postives = 41/69 (59.42%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISN-GYAFVTYGEASAASSAISEMDGIMYMGEKLRVEIS 76
            K+F+  + +   +S L  EF K G V DVYI+  GYAFVT   +  A  A  +++G    G++L+VEI+
Sbjct:    8 KLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA 76
[Close]
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Match: EMLSAG00000003333 (supercontig:LSalAtl2s:LSalAtl2s182:509525:511178:-1 gene:EMLSAG00000003333 transcript:EMLSAT00000003333 description:"maker-LSalAtl2s182-augustus-gene-5.31")

HSP 1 Score: 51.2174 bits (121), Expect = 2.291e-7
Identity = 24/73 (32.88%), Postives = 42/73 (57.53%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYI--------SNGYAFVTYGEASAASSAISEMDGIMYMGEKLRV 73
            K++IG++H ++ +  LR  FE FG+++ + +        S GY F+TY EA  A  A+ +M+G    G  ++V
Sbjct:  237 KLYIGSLHFDITEEMLRGIFEPFGKIMSIQLMMDTDTGRSKGYGFLTYAEAEDAKKALEQMNGFELAGRPIKV 309
[Close]
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Match: EMLSAG00000007146 (supercontig:LSalAtl2s:LSalAtl2s402:743406:749121:1 gene:EMLSAG00000007146 transcript:EMLSAT00000007146 description:"maker-LSalAtl2s402-augustus-gene-7.14")

HSP 1 Score: 50.8322 bits (120), Expect = 2.644e-7
Identity = 24/73 (32.88%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAH 81
            +V++G +   VR+ ++     K+G+V +V + NGY FV + +   A  A  +++G  +MGE++ VE++RG  H
Sbjct:   16 RVYMGGLSHRVRERDVEKLIRKYGKVREVSLKNGYGFVEFDDYRDADDACYDLNGKEFMGERVTVELARGTPH 88
[Close]
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Match: EMLSAG00000012034 (supercontig:LSalAtl2s:LSalAtl2s858:196241:197383:1 gene:EMLSAG00000012034 transcript:EMLSAT00000012034 description:"augustus_masked-LSalAtl2s858-processed-gene-2.3")

HSP 1 Score: 49.6766 bits (117), Expect = 5.130e-7
Identity = 27/86 (31.40%), Postives = 45/86 (52.33%), Query Frame = 0 
Query:    8 CKVFIGNIHENVRKSELRSEFEKFGEVLDVYISN---GYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRS 90
            CK+F+G I +N+   ++R  FE FG V DVYI      + FVT+ E+  A S    + G  +  + + + I+   +   +  MGR+
Sbjct:  231 CKIFVGRITQNMDGDDIRKHFETFGAVKDVYIPKPFRSFCFVTFNESRVAQS----LWGKEHTLKGVTICIASAHSKLKESEMGRT 312
[Close]
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Match: EMLSAG00000002605 (supercontig:LSalAtl2s:LSalAtl2s151:61867:66000:1 gene:EMLSAG00000002605 transcript:EMLSAT00000002605 description:"maker-LSalAtl2s151-augustus-gene-0.11")

HSP 1 Score: 48.9062 bits (115), Expect = 6.227e-7
Identity = 21/69 (30.43%), Postives = 44/69 (63.77%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISR 77
            ++++GNI ++ R+ ++   F+ +G++ +V + NGY FV + +   A  A+ ++DG    G ++RVE +R
Sbjct:    7 RLYLGNISDDTRERDVEKFFKGYGKLREVALKNGYGFVEFEDHRDADDAVQDLDGKDMNGSRVRVEFAR 75
[Close]
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Match: EMLSAG00000011164 (supercontig:LSalAtl2s:LSalAtl2s75:177881:179657:-1 gene:EMLSAG00000011164 transcript:EMLSAT00000011164 description:"maker-LSalAtl2s75-snap-gene-1.5")

HSP 1 Score: 49.6766 bits (117), Expect = 7.783e-7
Identity = 30/109 (27.52%), Postives = 57/109 (52.29%), Query Frame = 0 
Query:    6 PGCKVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGR--AHSDKRGMGRSSDYGRSDGPRPR-----GGGPP 107
            P  ++FIGN+  +V + +++S F+++G + ++ +   +AFV +     A +AI++ +G      K+ + +++ R   H  K  +   S   RS    PR     GGGPP
Sbjct:   12 PNSRIFIGNLDPSVYEEDIKSTFKRYGRIGEIVMRKSFAFVQFDSPDQAQNAIAKENGESIKSRKMSLSLAKARNSKHERKEDVPFHSQNKRSRHENPRRRQNSGGGPP 120
[Close]
BLAST of splicing arginine serine-rich 7 vs. SwissProt
Match: gi|51338672|sp|P84103.1|SRSF3_HUMAN (RecName: Full=Serine/arginine-rich splicing factor 3; AltName: Full=Pre-mRNA-splicing factor SRP20; AltName: Full=Splicing factor, arginine/serine-rich 3 >gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName: Full=Pre-mRNA-splicing factor SRP20; AltName: Full=Protein X16; AltName: Full=Splicing factor, arginine/serine-rich 3 >gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName: Full=Splicing factor, arginine/serine-rich 3)

HSP 1 Score: 58.151 bits (139), Expect = 4.971e-9
Identity = 30/82 (36.59%), Postives = 48/82 (58.54%), Query Frame = 0 
Query:    8 CKVFIGNIHENVRKSELRSEFEKFGEVLDVYISN---GYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRG 86
            CKV++GN+  N  K+EL   F  +G +  V+++    G+AFV + +   A+ A+ E+DG    G ++RVE+S G   S  RG
Sbjct:   10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNRG 91
[Close]
BLAST of splicing arginine serine-rich 7 vs. SwissProt
Match: gi|3929381|sp|Q24491.1|RX21_DROME (RecName: Full=RNA-binding protein Rsf1; AltName: Full=RNA-binding protein Rox21)

HSP 1 Score: 57.7658 bits (138), Expect = 9.434e-9
Identity = 27/74 (36.49%), Postives = 46/74 (62.16%), Query Frame = 0 
Query:    7 GCKVFIGNIHENVRKSELRSEFEKFGEVLDVYISN---GYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISR 77
            G +V++GN+ + V+K +L  EF K+G++  V+I+    G+AFV +     A  A   ++G   +G +LRVEIS+
Sbjct:    6 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEISK 79
[Close]
BLAST of splicing arginine serine-rich 7 vs. SwissProt
Match: gi|62510825|sp|Q94901.1|LARK_DROME (RecName: Full=RNA-binding protein lark)

HSP 1 Score: 58.5362 bits (140), Expect = 2.253e-8
Identity = 30/87 (34.48%), Postives = 46/87 (52.87%), Query Frame = 0 
Query:    2 ASAEPGCKVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMG 88
            A   P  K+F+GN+ +  R  E+R  F+K+G V++  I   Y FV          AI E++G +  G+ L+V++S  R    K GMG
Sbjct:   80 APNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRP-KPGMG 165
[Close]
BLAST of splicing arginine serine-rich 7 vs. SwissProt
Match: gi|62511030|sp|Q6IQ97.1|RBM41_DANRE (RecName: Full=RNA-binding protein 4.1; AltName: Full=RNA-binding motif protein 4.1)

HSP 1 Score: 56.9954 bits (136), Expect = 8.569e-8
Identity = 41/130 (31.54%), Postives = 61/130 (46.92%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRSSDYGRSDGPRPRGGGPPLARRDDYR-----DSNGPPYRGRGGGRGRGY 133
            K+ +GNI  +    ELR++FE++G V++  I   YAFV       A  AIS +D   + G+ + V++S  R  +   GMG  +   R           PL +   YR     +  GP     GG RGRG+
Sbjct:   79 KLHVGNISSSCTNQELRAKFEEYGPVVECDIVKDYAFVHMERVEDAMEAISGLDNTAFQGKLMSVKLSTSRLRTAP-GMGERTGCYRCGQEGHWSKECPLDQNGSYREGPSSEGFGPVRFDSGGDRGRGF 207
[Close]
BLAST of splicing arginine serine-rich 7 vs. SwissProt
Match: gi|73621448|sp|Q5RC41.1|RBM14_PONAB (RecName: Full=RNA-binding protein 14; AltName: Full=RNA-binding motif protein 14)

HSP 1 Score: 56.9954 bits (136), Expect = 1.052e-7
Identity = 24/69 (34.78%), Postives = 42/69 (60.87%), Query Frame = 0 
Query:    8 CKVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEIS 76
             K+F+GN+       ELRS FE+ G V++  +   YAFV   + + A +AI++++G    G+++ VE+S
Sbjct:   79 WKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELS 147
[Close]
BLAST of splicing arginine serine-rich 7 vs. SwissProt
Match: gi|73913750|sp|Q96PK6.2|RBM14_HUMAN (RecName: Full=RNA-binding protein 14; AltName: Full=Paraspeckle protein 2; Short=PSP2; AltName: Full=RNA-binding motif protein 14; AltName: Full=RRM-containing coactivator activator/modulator; AltName: Full=Synaptotagmin-interacting protein; Short=SYT-interacting protein)

HSP 1 Score: 56.9954 bits (136), Expect = 1.100e-7
Identity = 24/69 (34.78%), Postives = 42/69 (60.87%), Query Frame = 0 
Query:    8 CKVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEIS 76
             K+F+GN+       ELRS FE+ G V++  +   YAFV   + + A +AI++++G    G+++ VE+S
Sbjct:   79 WKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELS 147
[Close]
BLAST of splicing arginine serine-rich 7 vs. SwissProt
Match: gi|73621446|sp|Q5EA36.1|RBM14_BOVIN (RecName: Full=RNA-binding protein 14; AltName: Full=RNA-binding motif protein 14)

HSP 1 Score: 56.9954 bits (136), Expect = 1.171e-7
Identity = 24/69 (34.78%), Postives = 42/69 (60.87%), Query Frame = 0 
Query:    8 CKVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEIS 76
             K+F+GN+       ELRS FE+ G V++  +   YAFV   + + A +AI++++G    G+++ VE+S
Sbjct:   79 WKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELS 147
[Close]
BLAST of splicing arginine serine-rich 7 vs. SwissProt
Match: gi|73621447|sp|Q8C2Q3.1|RBM14_MOUSE (RecName: Full=RNA-binding protein 14; AltName: Full=RNA-binding motif protein 14)

HSP 1 Score: 56.6102 bits (135), Expect = 1.302e-7
Identity = 24/69 (34.78%), Postives = 42/69 (60.87%), Query Frame = 0 
Query:    8 CKVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEIS 76
             K+F+GN+       ELRS FE+ G V++  +   YAFV   + + A +AI++++G    G+++ VE+S
Sbjct:   79 WKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELS 147
[Close]
BLAST of splicing arginine serine-rich 7 vs. SwissProt
Match: gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE (RecName: Full=RNA-binding motif protein, X chromosome; AltName: Full=Heterogeneous nuclear ribonucleoprotein G; Short=hnRNP G)

HSP 1 Score: 54.299 bits (129), Expect = 5.272e-7
Identity = 28/84 (33.33%), Postives = 43/84 (51.19%), Query Frame = 0 
Query:    1 MASAEPGCKVFIGNIHENVRKSELRSEFEKFGEVLDVYI--------SNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEIS 76
            MA A+   K+FIG ++    +  L + F KFG + +V +        S G+AFVTY     A  A  EM+G    G+ ++VE +
Sbjct:    1 MAEADRPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAAREMNGKPLDGKPIKVEQA 84
[Close]
BLAST of splicing arginine serine-rich 7 vs. SwissProt
Match: gi|20981728|sp|Q13247.2|SRSF6_HUMAN (RecName: Full=Serine/arginine-rich splicing factor 6; AltName: Full=Pre-mRNA-splicing factor SRP55; AltName: Full=Splicing factor, arginine/serine-rich 6)

HSP 1 Score: 53.9138 bits (128), Expect = 6.175e-7
Identity = 25/70 (35.71%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRG 78
            +V+IG +  NVR+ +++  F  +G +L+V + NGY FV + ++  A  A+ E++G    GE++ VE +RG
Sbjct:    3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
[Close]
BLAST of splicing arginine serine-rich 7 vs. nr
Match: gi|1325283430|ref|XP_023326415.1| (proline-rich protein 2-like [Eurytemora affinis])

HSP 1 Score: 102.064 bits (253), Expect = 3.402e-20
Identity = 46/74 (62.16%), Postives = 54/74 (72.97%), Query Frame = 0 
Query:    1 MASAEPGCKVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVE 74
            MA    GCKVF+GNI E VRK +LR+ FEKFGEV +V+ISNG+ FVT+ E  AA  A  EM G +Y GEKLRVE
Sbjct:    1 MAEPPVGCKVFVGNISELVRKQDLRASFEKFGEVEEVFISNGFGFVTFLEPRAADKACEEMHGTIYSGEKLRVE 74
[Close]
BLAST of splicing arginine serine-rich 7 vs. nr
Match: gi|225714554|gb|ACO13123.1| (Splicing factor, arginine/serine-rich 7 [Lepeophtheirus salmonis] >gi|290462113|gb|ADD24104.1| Splicing factor, arginine/serine-rich 7 [Lepeophtheirus salmonis])

HSP 1 Score: 89.7373 bits (221), Expect = 1.062e-16
Identity = 35/69 (50.72%), Postives = 55/69 (79.71%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISR 77
            K++IGN++E +RKSELR EFEKFGE+ D+++++G+A +TY +  ++  AI  MDG ++ G KLRVE+S+
Sbjct:    4 KIYIGNLNETIRKSELRQEFEKFGEISDLFVNHGFAHLTYVDTRSSEDAIRIMDGEVFFGSKLRVEMSQ 72
[Close]
BLAST of splicing arginine serine-rich 7 vs. nr
Match: gi|1139751372|ref|XP_019922130.1| (PREDICTED: RNA-binding protein lark isoform X1 [Crassostrea gigas])

HSP 1 Score: 74.7146 bits (182), Expect = 8.629e-12
Identity = 46/131 (35.11%), Postives = 68/131 (51.91%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRSSDYGRS--------DGP------RPRGGGPPLARRDDYRDSNGPPYRGR 125
            K++IGN+ E  RK++L+  FE +G+V++  I   Y F+ +   + A  A + +DG+ + G KL+VE+S  +    K GMG   +  R         D P      +PRG  PP   RD YRD   P YR R
Sbjct:    8 KLYIGNLPETCRKADLQKMFEAYGKVIECDIVRNYCFIHFENPNEAKMAQANLDGVDFEGVKLKVEMSHSKVRQ-KPGMGGKGECYRCGKEGHWSKDCPKGPSRGKPRGPEPPY--RDPYRDPYDPYYRDR 135
[Close]
BLAST of splicing arginine serine-rich 7 vs. nr
Match: gi|1139751376|ref|XP_019922132.1| (PREDICTED: RNA-binding protein lark isoform X3 [Crassostrea gigas])

HSP 1 Score: 73.559 bits (179), Expect = 1.523e-11
Identity = 46/131 (35.11%), Postives = 68/131 (51.91%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRSSDYGRS--------DGP------RPRGGGPPLARRDDYRDSNGPPYRGR 125
            K++IGN+ E  RK++L+  FE +G+V++  I   Y F+ +   + A  A + +DG+ + G KL+VE+S  +    K GMG   +  R         D P      +PRG  PP   RD YRD   P YR R
Sbjct:    8 KLYIGNLPETCRKADLQKMFEAYGKVIECDIVRNYCFIHFENPNEAKMAQANLDGVDFEGVKLKVEMSHSKVRQ-KPGMGGKGECYRCGKEGHWSKDCPKGPSRGKPRGPEPPY--RDPYRDPYDPYYRDR 135
[Close]
BLAST of splicing arginine serine-rich 7 vs. nr
Match: gi|1139751374|ref|XP_019922131.1| (PREDICTED: RNA-binding protein lark isoform X2 [Crassostrea gigas])

HSP 1 Score: 73.559 bits (179), Expect = 2.124e-11
Identity = 46/131 (35.11%), Postives = 68/131 (51.91%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRSSDYGRS--------DGP------RPRGGGPPLARRDDYRDSNGPPYRGR 125
            K++IGN+ E  RK++L+  FE +G+V++  I   Y F+ +   + A  A + +DG+ + G KL+VE+S  +    K GMG   +  R         D P      +PRG  PP   RD YRD   P YR R
Sbjct:    8 KLYIGNLPETCRKADLQKMFEAYGKVIECDIVRNYCFIHFENPNEAKMAQANLDGVDFEGVKLKVEMSHSKVRQ-KPGMGGKGECYRCGKEGHWSKDCPKGPSRGKPRGPEPPY--RDPYRDPYDPYYRDR 135
[Close]
BLAST of splicing arginine serine-rich 7 vs. nr
Match: gi|1009524736|ref|XP_015905985.1| (RNA-binding protein lark isoform X3 [Parasteatoda tepidariorum])

HSP 1 Score: 72.7886 bits (177), Expect = 3.031e-11
Identity = 49/134 (36.57%), Postives = 65/134 (48.51%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRSSDYGRSDGPRPRGGGPPLARRDDYRDSNGPPY----RGRGGGRGRGYGMDRP 138
            K+++GN+ EN    EL+  FEK+GEV +  I   YAFV       A +AI  ++ I +MG K+ VEIS  +    + GMG      R    R         R    R +NGPP      G GG R   +GMDRP
Sbjct:    5 KIYVGNLPENAHNGELQELFEKYGEVKECDIVKNYAFVHMSSEEEAKTAIEALNNIDFMGSKISVEISHSKVR-QRPGMGGKGQCYRCG--RQGHWSKECPRNPATRMNNGPPIGYPTGGYGGDRFSRFGMDRP 135
[Close]
BLAST of splicing arginine serine-rich 7 vs. nr
Match: gi|405974565|gb|EKC39200.1| (RNA-binding protein 4 [Crassostrea gigas])

HSP 1 Score: 72.7886 bits (177), Expect = 3.474e-11
Identity = 46/131 (35.11%), Postives = 68/131 (51.91%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRSSDYGRS--------DGP------RPRGGGPPLARRDDYRDSNGPPYRGR 125
            K++IGN+ E  RK++L+  FE +G+V++  I   Y F+ +   + A  A + +DG+ + G KL+VE+S  +    K GMG   +  R         D P      +PRG  PP   RD YRD   P YR R
Sbjct:    8 KLYIGNLPETCRKADLQKMFEAYGKVIECDIVRNYCFIHFENPNEAKMAQANLDGVDFEGVKLKVEMSHSKVRQ-KPGMGGKGECYRCGKEGHWSKDCPKGPSRGKPRGPEPPY--RDPYRDPYDPYYRDR 135
[Close]
BLAST of splicing arginine serine-rich 7 vs. nr
Match: gi|1009524732|ref|XP_015905968.1| (RNA-binding protein lark isoform X1 [Parasteatoda tepidariorum])

HSP 1 Score: 72.7886 bits (177), Expect = 3.588e-11
Identity = 49/134 (36.57%), Postives = 65/134 (48.51%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRSSDYGRSDGPRPRGGGPPLARRDDYRDSNGPPY----RGRGGGRGRGYGMDRP 138
            K+++GN+ EN    EL+  FEK+GEV +  I   YAFV       A +AI  ++ I +MG K+ VEIS  +    + GMG      R    R         R    R +NGPP      G GG R   +GMDRP
Sbjct:    7 KIYVGNLPENAHNGELQELFEKYGEVKECDIVKNYAFVHMSSEEEAKTAIEALNNIDFMGSKISVEISHSKVR-QRPGMGGKGQCYRCG--RQGHWSKECPRNPATRMNNGPPIGYPTGGYGGDRFSRFGMDRP 137
[Close]
BLAST of splicing arginine serine-rich 7 vs. nr
Match: gi|1242790084|ref|XP_022335184.1| (RNA-binding protein lark-like [Crassostrea virginica])

HSP 1 Score: 72.7886 bits (177), Expect = 3.591e-11
Identity = 45/131 (34.35%), Postives = 67/131 (51.15%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRSSDYGRS--------DGP------RPRGGGPPLARRDDYRDSNGPPYRGR 125
            K+++GN+ E  RK++L+  FE +G+V++  I   Y F+ +   + A  A + +DG  + G KL+VE+S  +    K GMG   +  R         D P      +PRG  PP   RD YRD   P YR R
Sbjct:    8 KLYVGNLPETCRKADLQKMFEAYGKVIECDIVRNYCFIHFENPNEAKMAQANLDGADFEGAKLKVELSHSKVRQ-KPGMGGKGECYRCGKEGHWSKDCPKGPSRGKPRGPEPPY--RDPYRDPYDPYYRDR 135
[Close]
BLAST of splicing arginine serine-rich 7 vs. nr
Match: gi|1009524734|ref|XP_015905977.1| (RNA-binding protein lark isoform X2 [Parasteatoda tepidariorum])

HSP 1 Score: 72.0182 bits (175), Expect = 5.999e-11
Identity = 49/134 (36.57%), Postives = 65/134 (48.51%), Query Frame = 0 
Query:    9 KVFIGNIHENVRKSELRSEFEKFGEVLDVYISNGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRSSDYGRSDGPRPRGGGPPLARRDDYRDSNGPPY----RGRGGGRGRGYGMDRP 138
            K+++GN+ EN    EL+  FEK+GEV +  I   YAFV       A +AI  ++ I +MG K+ VEIS  +    + GMG      R    R         R    R +NGPP      G GG R   +GMDRP
Sbjct:    7 KIYVGNLPENAHNGELQELFEKYGEVKECDIVKNYAFVHMSSEEEAKTAIEALNNIDFMGSKISVEISHSKVRQ-RPGMGGKGQCYRCG--RQGHWSKECPRNPATRMNNGPPIGYPTGGYGGDRFSRFGMDRP 137
The following BLAST results are available for this feature:
BLAST of splicing arginine serine-rich 7 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 10
Match NameE-valueIdentityDescription
EMLSAG000000092701.030e-2050.72supercontig:LSalAtl2s:LSalAtl2s591:151036:155497:-... [more]
EMLSAG000000093598.833e-928.21supercontig:LSalAtl2s:LSalAtl2s599:215116:228556:-... [more]
EMLSAG000000073471.749e-837.84supercontig:LSalAtl2s:LSalAtl2s4162:3600:4079:1 ge... [more]
EMLSAG000000054753.189e-832.88supercontig:LSalAtl2s:LSalAtl2s294:4530:9586:-1 ge... [more]
EMLSAG000000025563.826e-839.13supercontig:LSalAtl2s:LSalAtl2s1510:24535:24822:1 ... [more]
EMLSAG000000033332.291e-732.88supercontig:LSalAtl2s:LSalAtl2s182:509525:511178:-... [more]
EMLSAG000000071462.644e-732.88supercontig:LSalAtl2s:LSalAtl2s402:743406:749121:1... [more]
EMLSAG000000120345.130e-731.40supercontig:LSalAtl2s:LSalAtl2s858:196241:197383:1... [more]
EMLSAG000000026056.227e-730.43supercontig:LSalAtl2s:LSalAtl2s151:61867:66000:1 g... [more]
EMLSAG000000111647.783e-727.52supercontig:LSalAtl2s:LSalAtl2s75:177881:179657:-1... [more]
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BLAST of splicing arginine serine-rich 7 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
gi|51338672|sp|P84103.1|SRSF3_HUMAN4.971e-936.59RecName: Full=Serine/arginine-rich splicing factor... [more]
gi|3929381|sp|Q24491.1|RX21_DROME9.434e-936.49RecName: Full=RNA-binding protein Rsf1; AltName: F... [more]
gi|62510825|sp|Q94901.1|LARK_DROME2.253e-834.48RecName: Full=RNA-binding protein lark[more]
gi|62511030|sp|Q6IQ97.1|RBM41_DANRE8.569e-831.54RecName: Full=RNA-binding protein 4.1; AltName: Fu... [more]
gi|73621448|sp|Q5RC41.1|RBM14_PONAB1.052e-734.78RecName: Full=RNA-binding protein 14; AltName: Ful... [more]
gi|73913750|sp|Q96PK6.2|RBM14_HUMAN1.100e-734.78RecName: Full=RNA-binding protein 14; AltName: Ful... [more]
gi|73621446|sp|Q5EA36.1|RBM14_BOVIN1.171e-734.78RecName: Full=RNA-binding protein 14; AltName: Ful... [more]
gi|73621447|sp|Q8C2Q3.1|RBM14_MOUSE1.302e-734.78RecName: Full=RNA-binding protein 14; AltName: Ful... [more]
gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE5.272e-733.33RecName: Full=RNA-binding motif protein, X chromos... [more]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN6.175e-735.71RecName: Full=Serine/arginine-rich splicing factor... [more]

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BLAST of splicing arginine serine-rich 7 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325283430|ref|XP_023326415.1|3.402e-2062.16proline-rich protein 2-like [Eurytemora affinis][more]
gi|225714554|gb|ACO13123.1|1.062e-1650.72Splicing factor, arginine/serine-rich 7 [Lepeophth... [more]
gi|1139751372|ref|XP_019922130.1|8.629e-1235.11PREDICTED: RNA-binding protein lark isoform X1 [Cr... [more]
gi|1139751376|ref|XP_019922132.1|1.523e-1135.11PREDICTED: RNA-binding protein lark isoform X3 [Cr... [more]
gi|1139751374|ref|XP_019922131.1|2.124e-1135.11PREDICTED: RNA-binding protein lark isoform X2 [Cr... [more]
gi|1009524736|ref|XP_015905985.1|3.031e-1136.57RNA-binding protein lark isoform X3 [Parasteatoda ... [more]
gi|405974565|gb|EKC39200.1|3.474e-1135.11RNA-binding protein 4 [Crassostrea gigas][more]
gi|1009524732|ref|XP_015905968.1|3.588e-1136.57RNA-binding protein lark isoform X1 [Parasteatoda ... [more]
gi|1242790084|ref|XP_022335184.1|3.591e-1134.35RNA-binding protein lark-like [Crassostrea virgini... [more]
gi|1009524734|ref|XP_015905977.1|5.999e-1136.57RNA-binding protein lark isoform X2 [Parasteatoda ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2012_size22666supercontigscaffold2012_size22666:17148..18503 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold2012_size22666-snap-gene-0.17-mRNA-1maker-scaffold2012_size22666-snap-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold2012_size22666:17148..18503-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold2012_size22666-snap-gene-0.17 ID=maker-scaffold2012_size22666-snap-gene-0.17|Name=splicing arginine serine-rich 7|organism=Tigriopus kingsejongensis|type=gene|length=1356bp|location=Sequence derived from alignment at scaffold2012_size22666:17148..18503- (Tigriopus kingsejongensis)
ATGGCCAGTGCCGAGCCGGGCTGCAAAGTATTCATCGGCAACATCCATGA
AAATGTGAGAAAGTCAGAGCTGCGCAGCGAGTTCGAGAAATTCGGCGAAG
TCCTAGACGTGTACATCTCCAACGGCTACGCCTTCGTCACCTATGGCGAG
GCCAGTGCGGCCTCCTCGGCCATCAGCGAGATGGACGGCATCATGTACAT
GGGCGAGAAGCTCCGGGTGGAGATCTCGCGCGGACGCGCCCACTCGGACA
AGCGCGGCATGGGACGATCCTCGGACTACGGGCGGAGTGACGGGCCCCGA
CCCCGAGGCGGGGGACCGCCCTTAGCTAGGCGTGACGACTATCGCGACTC
CAACGGCCCACCCTACCGCGGACGAGGCGGTGGGCGCGGCCGAGGCTACG
GCATGGATCGACCGCCACCCATGCGAGACGGACCGCCCCGATATGAGCGA
CGCGACGCCCCCCACGACTACCGCGGCGGAGGCGGCTCATCCCGCCTGGA
GAGCCGAGTGGGCGGCTACGAGCGTCGACGCTCACCCTCACCTCTACCGG
CCTCGGCTCCACGCTCGTATGGGGACGACATGGGCGGGTATGGATCGCGA
TCCTCGCGCCACTACCCGCCAGCCAGCGACCTCCCCTTGTCGCCACCTCG
ACGCTCCTCCGTATTAGATGATCGCCGTCGATCGCCACCGCCTTCCCGCA
GATTCGAGCGCGATGGTCCCTCCTTTCGCCGAAGAACGCCTCCGCCTCTG
CCTCATCGGCGCGACGACATAGGCCGCCGACCCATGACACCGCCCGGACC
TCCGGGGGGCGGCCGCTTTCGCAGCCGCTCGCCCATGGAACGTTACGCCA
GCGGGTAATGCTATACTCAGTTTCGTGCATGGTTTCTCTTTCAGCATTTG
TTTTCAGTCCCGCCACCGGCCTATCCAGGACGCCGAGTGGCCTTTGCGCC
CACAGCATTCGTGCCCTTGAAGAACGGGCCCACACTGGCCAGTCAGGATT
CTGCATTCCGAACGGCTCCGCTTAAGAATTCGTGATTCCCCTCCTAAATC
TAGTCCCATCTCTCTGAAACTTTTAGACCAAGACCGGAGTATTCCGAACG
AAGAGCGCCAGAGTTCAGCCCTCGCGAATCTCGGCCTTCCTTTAGCCGGG
GCGGCGGTGGTCGAGGCCGCCCCAGGTACGACGATGACCAAGGGCGAGGC
CGGGGCGGCGGCTACTATGGCGGCTCGGGTGGACGAGGGGGTTCCTTCTC
CTCTCATCGAGACGACCGTGATCCACCGGCCAGAAGTTCCAGCGGGGGCG
GCGGGGGCAGCTTCGGAGGAGGTGGACGCCATCGCTCGCCTCGACCCAGA
TATTAG
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Synonyms
The feature 'splicing arginine serine-rich 7' has the following synonyms
Synonym
Tk01854
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