va5_rhybr ame: full, maker-scaffold202_size261857-snap-gene-1.20 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of va5_rhybr ame: full vs. L. salmonis genes
Match: EMLSAG00000006832 (supercontig:LSalAtl2s:LSalAtl2s385:192918:203974:-1 gene:EMLSAG00000006832 transcript:EMLSAT00000006832 description:"maker-LSalAtl2s385-augustus-gene-2.6") HSP 1 Score: 149.058 bits (375), Expect = 4.122e-36 Identity = 105/319 (32.92%), Postives = 148/319 (46.39%), Query Frame = 0
Query: 59 EAFRGPPGVGQNIAWALTKDVNFTQIIDDLWYRDISQVQPGHIEDFQ------------------QVGCGWTQFPVTDSSPIRMMNSGLLAKYGMGGENKTLFENFFVCNYGVGGNVLGESVFNC---DDGSSPSSPAKSAEQASLDAMKDLSSTVIKYQDQYQNASPEIKDAIQTCLEAISCIDQSALRTSNGCLSVQSKCLDSS-----VDRLPQQSDDDLISRLECHIGELLCG--LAKTFEQCKKDHASCMDSRATGPVAATTTQAPSRGNVKQSATTRPITRVTTNGPTIGSTH--LDLS-STTTTLTSIGLEI 346
E P QN+AWALTK+VNF++IIDDLWY+DI+ QPG+I++F VGCGW QFP M S + Y G ENFFVCNYGVGGNV GE V++C ++ P+ P E I++ ++Y +SP+I++ IQ C EAISC ++S R C ++ C+ + LP+ D + EC I +LC L FE C + + C +R T + + +TT +TT+ +H +D+S TT TS L I
Sbjct: 148 EWIELPKXXXQNVAWALTKNVNFSKIIDDLWYKDINNFQPGYIKEFNVDDADGSLMTQIIWGRTTHVGCGWXQFP---------MGSHVDDLYPEGEX-----ENFFVCNYGVGGNVPGEPVYDCLNKEEAVLPTLPTFGLE--------------IQFGERYPTSSPQIQEEIQACFEAISCENKSPKR---NCQNLAFSCMREMEKELLIFVLPK----DRVRVFECRIEFILCSVELEPGFEMCNEFYEFCKVNRLTSATDVVISSKDVDLTTIRPSTTMANRALTTSSRLSALSHPKIDISFYNTTARTSYSLAI 431 HSP 2 Score: 132.88 bits (333), Expect = 3.612e-31 Identity = 91/286 (31.82%), Postives = 152/286 (53.15%), Query Frame = 0
Query: 469 YPRIDMRFYNASERSEERLAICLNSLECT-EDVPQCQQLLLICNQGLNVTQIHKKVLEKLTECMIQDIICFLQGGASNYEFCRTRFESCVDIILPNNVRI---PLYDPSLQEESDFDLTNLEAFVEISGLTNHSEG-----SDGSIAGNVTHNVFDSISNTLGGIQVSDAIGNKTLDEILADSSTLKVFQDIHIILNDNPEESNGTFVALTVNGTKIMV----DIDNPAVVLDPNSFIEGFDKQANLDNSTKKMLIEEIINNFKAVGTVC--AFCSHPSLEEDELL 739
+P+ID+ FYN + R+ LAICL +C E C L CNQGL+++ + V +KL+EC I DI+C L G S Y FC+ ++E C DII+PN++ I PL + ++LE F+ + GLT+ + + ++ NVT+NV ++ N GGI++ N ++ E+L D+ TL +FQDI +I+ N E N T +++ G ++ D+DN V+ ++ G + Q+++ + + E+I ++ + T C C E E+L
Sbjct: 411 HPKIDISFYNTTARTSYSLAICLEGSKCNGEHNNTCFTLQSECNQGLDLSAVPNPVRKKLSECAIDDILCHLDGSISTY-FCQKKYEICADIIIPNDITISALPLLRSTSHGSGSVGNSHLEPFLFLLGLTDIANDIKNVPNTENVLTNVTNNVLGALDNAFGGIEILPM--NTSIYELLQDNETLPIFQDIVVIIKTN-EIDNSTEYSVSGQGPIDVIDRFPDLDNATVIFSTSNIKIGGEGQSSIRDPIVDHIKEKIRDSLSEIATECNQHICFQAINESKEVL 692 HSP 3 Score: 97.0561 bits (240), Expect = 2.974e-20 Identity = 86/215 (40.00%), Postives = 120/215 (55.81%), Query Frame = 0
Query: 1240 IEYINTVPD-------EDDQTFDNNLNILFSRESSADIVNATVVEDFDYARRIRDSKRNLGIATIWSIIVGAISLLLIGLFIFMIIARRRRRS------YSTTTPTVSRNTLTGTPI-IVDTPS-----PSVSSVF--NSGLHSAENGDPVMPIDGHQTIVTSYEEYM-FAGGARGSIMSSLPPPADSGPTSLESNPDVPLTQDLSDRDDYLFSR 1432
+EYI PD EDD+ +++ LN L SSA+IV A+VVED +YAR IR+S R +GI TI SI +G + L L +F +ARRRRR Y ++P+ SR T T +P+ V+TPS PS + ++G S+ N DPV+ IDGHQTI++SY E++ A A+ P P P T++LSD +YLF+R
Sbjct: 2822 VEYI---PDNKIISYTEDDKLYESGLNFLSGGGSSANIVEASVVEDLNYARSIRNS-RGMGIGTIASITIGILVLFGFALLVFFAVARRRRRYLDDGNIYGISSPSQSRTTFTDSPLGTVETPSMSELRPSFTDEVPPSTGALSSGN-DPVLQIDGHQTIISSYNEFLNLAENAQ------TPSP-----------PSSHRTKNLSDSSEYLFAR 3014
BLAST of va5_rhybr ame: full vs. L. salmonis genes
Match: EMLSAG00000001943 (supercontig:LSalAtl2s:LSalAtl2s133:467280:542329:-1 gene:EMLSAG00000001943 transcript:EMLSAT00000001943 description:"maker-LSalAtl2s133-augustus-gene-4.14") HSP 1 Score: 78.9518 bits (193), Expect = 1.077e-14 Identity = 53/174 (30.46%), Postives = 71/174 (40.80%), Query Frame = 0
Query: 17 KWDDELARIAQIWADQCASVIYFHGSDMY-PKVFHERGTERTTEAFRGPPGVGQNIAWALTKD----VNFTQIIDDLWYRDISQVQPGHIEDF---------------------QQVGCGWTQFPVTDSSPIRMMNSGLLAKYGMGGENKTLFENFFVCNYGVGGNVLGESVFN 164
+WD ELAR+AQ WADQCA V Y P ++H++ R + F G GQN+A ++K N ++I W+ I P +E F VGCGW QF KY FENF VCNYG N+ + V++
Sbjct: 141 QWDPELARVAQKWADQCAEVDYKEDIKRKDPLLYHDKHANRKIDRFSNWQGTGQNVARDISKGKPGIFNAHKLIRH-WFNQIRFFDPAGVESFGSGNQCSQGIGYYTQLVWQDTTHVGCGWVQFQYRG-----------FEKY---------FENFLVCNYGPSANIWKQPVYD 293
BLAST of va5_rhybr ame: full vs. L. salmonis genes
Match: EMLSAG00000011068 (supercontig:LSalAtl2s:LSalAtl2s747:71658:81234:-1 gene:EMLSAG00000011068 transcript:EMLSAT00000011068 description:"maker-LSalAtl2s747-augustus-gene-0.5") HSP 1 Score: 53.5286 bits (127), Expect = 3.787e-7 Identity = 43/154 (27.92%), Postives = 68/154 (44.16%), Query Frame = 0
Query: 18 WDDELARIAQIWADQCASVIYFHGSDMYPKVFHERGTERTTEAFRGPP--GVGQNIA--WALTK--DVNFTQIIDDLWYRDISQVQPGHIEDFQQVGCGWT--QFPVTDSSPIRMMNSGLLAKYGMGGENKTLFENFFVCNYGVGGNVLGESVF 163
WDD LA AQ+WA QC + H++ R T F P VGQN+A W+ K + N+ +I WY ++S +++++ G + + + G + Y N ++ VCNYG GGN+LG+ V+
Sbjct: 595 WDDNLALSAQMWALQCPNA-------------HDK--NRLTPEFHDHPYVWVGQNLAFLWSSVKSSNRNYEDMIKG-WYNEVSDFPSKNVKNYSNAGAKGVVGHYTTMIWGSTKKIGCGFVHHYDRTQLNNP-YKKTLVCNYGKGGNILGQEVY 731
BLAST of va5_rhybr ame: full vs. SwissProt
Match: gi|313471715|sp|B2MVK7.1|VA5_RHYBR (RecName: Full=Venom allergen 5; AltName: Full=Antigen 5; AltName: Full=Cysteine-rich venom protein; Short=CRVP; Flags: Precursor) HSP 1 Score: 58.9214 bits (141), Expect = 3.811e-8 Identity = 47/152 (30.92%), Postives = 71/152 (46.71%), Query Frame = 0
Query: 18 WDDELARIAQIWADQCASVIYFHGSDMYPKVFHERGTERTTEAFRGPPGVGQNIAWALTKDVNFTQIID--DLWYRDISQVQPGHIEDFQQVGCG----WTQFPVTDSSPIRMMNSGLLAKYGMGGENKTLFENFFVCNYGVGGNVLGESVF 163
WDDELA++AQ WA+QC + H++ R+ F VGQN+A T +F +++ LW ++S +I+ G +TQ S+ + G + K+ G NK +F VCNYG GN LG+SV+
Sbjct: 102 WDDELAKVAQTWANQCT-------------INHDKC--RSVSRF----SVGQNLASKSTTGNDFPPVVELIQLWENEVSDFDKNNIKSLPASGISKTGHYTQMVWAKSNK---LGCGSI-KHHKDGWNK----HFLVCNYGPSGNYLGQSVY 226
BLAST of va5_rhybr ame: full vs. nr
Match: gi|1325294344|ref|XP_023330457.1| (uncharacterized protein LOC111702892 [Eurytemora affinis]) HSP 1 Score: 191.815 bits (486), Expect = 4.334e-45 Identity = 127/405 (31.36%), Postives = 183/405 (45.19%), Query Frame = 0
Query: 17 KWDDELARIAQIWADQCASVIYFHGSDMYPKVFHERGTERTTEAFRGPPGVGQNIAWALTKDVNFTQIIDDLWYRDISQVQPGHIEDFQ--------------------QVGCGWTQFPVTDSSPIRMMNSGLLAKYGMGGENKTLFENFFVCNYGVGGNVLGESVFNCDDGSSPSSPAKSAEQASLDAMKDLSSTVIKYQDQYQNASPEIKDAIQTCLEAISCIDQSAL---------------RTSNGCLSVQSKCLD-----SSVDRLPQQSDDDLISRLECHIGELLCGLAKTFEQCKKDHASCMDSR------ATGPV--------AATTTQAPSRGNVKQSATTRPITRVTTNG-----PTIGSTHLDLSSTTTTLTSIGLEITTISPFEQSGLRPNGK 362
+WD ELA AQ+WADQCA ++Y G +YPK+FHE+ +R+T F PGVGQNIAWALT+++N TQIIDDLWY+DIS++ P +EDFQ +GCGW Q VT++ +Y + + +EN FVCNYG+GGNV+G+ VF +D + + + ++K +Q ASP + + +CL+AI C++ L T C C S R S EC I +LC T+ C + C+ + +T P + T TQ + T +T VT PTI S+ + + +TT S G+EITT +P S + N +
Sbjct: 120 EWDTELAETAQVWADQCAMIVYKDG--VYPKIFHEKSFQRSTSRFNSAPGVGQNIAWALTQELNLTQIIDDLWYKDISKLTPEQLEDFQPGQLDPDSLLVTQMLWGQTTHIGCGWLQIEVTEN------------RYADVYDGR--YENIFVCNYGIGGNVVGQPVFEHNDCLTELPTYTPSPPSP----------ILKSGEQ---ASPVDRSRLASCLDAILCLEAPKLLSEISTEIMTVEVNPETEESCRKYADLCFYPLNTPSGFSR----------SVFECRIESILCSQNTTWGDCNTNLQDCIQASEKTVEGSTKPTGLEFSELGSETYTQEGRQTTTASYLVTDRVTAVTDKTLSDPVPTISSSAFE--AVSTTFKSPGVEITTTNPLFASKTQQNSE 483 HSP 2 Score: 105.531 bits (262), Expect = 8.889e-19 Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 0
Query: 1261 LFSRESSADIVNATVVEDFDYARRIRDSKRNLGIATIWSIIVGAISLLLIGLFIFMIIARRRRRSYSTTTPTV----SRNTLTGT-PIIVDTPSPSVSSVFNSGLHSAE--NGDPVMPIDGHQTIVTSYEEYM-FAGGARGSIMSSLPPPADS 1405
LF+ S++ +V ATV+ED YAR IR ++GIA I SI++G ++LL L +F+ +ARRRR TT+ T SR T GT + D P + ++ + ++E D V+P+DGHQTI+ S+E+++ +R SI+SSLPPP +S
Sbjct: 5690 LFADTSNSGVVKATVIEDTSYARSIR--PPSVGIAAIVSIVIGTLALLCFSLMVFLTMARRRRMLEETTSQTAYTSTSRYTPEGTHSFVSDLKQPYAAEEYSPNVSASEIHRDDVVIPVDGHQTIIGSFEDFLEVPASSRPSILSSLPPPPNS 5840
BLAST of va5_rhybr ame: full vs. nr
Match: gi|1325266933|ref|XP_023339610.1| (SCO-spondin-like [Eurytemora affinis]) HSP 1 Score: 78.5666 bits (192), Expect = 9.248e-11 Identity = 58/174 (33.33%), Postives = 75/174 (43.10%), Query Frame = 0
Query: 18 WDDELARIAQIWADQCASVIY---FHGSDMYPKVFHERGTERTTEAFRGPPGVGQNIAWALTKDV----NFTQIIDDLWYRDISQVQPGHIEDFQ---------------------QVGCGWTQFPVTDSSPIRMMNSGLLAKYGMGGENKTLFENFFVCNYGVGGNVLGESVF 163
WDDELAR+AQ WADQCA V Y + D P +FH+ R +F GVGQN+A +++ V N T +I W+R I P ++ F VGCGW+QF G G FENF VCNYG N+ + V+
Sbjct: 34 WDDELARVAQKWADQCADVDYKEDYKRQD--PSLFHDPHPNRKVFSFSDWRGVGQNVARDISRGVTGKFNATSLIGH-WFRQIRLFDPEGVKAFGSGNQCGTGVGYYTQLVWENTTHVGCGWSQFQY----------------RGFPG----YFENFLVCNYGPAANIWKDPVY 184
BLAST of va5_rhybr ame: full vs. nr
Match: gi|936688307|ref|XP_014222133.1| (venom allergen 3-like isoform X2 [Trichogramma pretiosum]) HSP 1 Score: 64.3142 bits (155), Expect = 2.798e-8 Identity = 52/158 (32.91%), Postives = 75/158 (47.47%), Query Frame = 0
Query: 15 NSKWDDELARIAQIWADQCASVIYFHGSDMYPKVFHERGTERTTEAFRGPPGVGQNIAW-ALTKDVNFTQIID--DLWYRDISQVQPGHIEDFQQVGCG------WTQFPVTDSSPIRMMNSGLLAKYGMGGENKTLFENFFVCNYGVGGNVLGESVF 163
N +WDDELA +AQ WAD+C I+ H ER +R T VGQNIA+ + T D+N +I + +WY ++ + F+ G +TQ ++ M G + KY G NK + VCNYG GGN LG+ ++
Sbjct: 3 NLEWDDELAAVAQRWADKC---IWGHD--------RERNVKRFT--------VGQNIAYLSTTGDINSLKIEEMVYMWYDEVVHYSKDDVLKFRNKGANGQPIGHYTQMIWAKTTK---MGCGAV-KYRDGNYNKF----YIVCNYGPGGNFLGQPLY 133
BLAST of va5_rhybr ame: full vs. nr
Match: gi|936688305|ref|XP_014222132.1| (venom allergen 3-like isoform X1 [Trichogramma pretiosum]) HSP 1 Score: 64.6994 bits (156), Expect = 6.406e-8 Identity = 52/161 (32.30%), Postives = 76/161 (47.20%), Query Frame = 0
Query: 12 YRSNSKWDDELARIAQIWADQCASVIYFHGSDMYPKVFHERGTERTTEAFRGPPGVGQNIAW-ALTKDVNFTQIID--DLWYRDISQVQPGHIEDFQQVGCG------WTQFPVTDSSPIRMMNSGLLAKYGMGGENKTLFENFFVCNYGVGGNVLGESVF 163
+ N +WDDELA +AQ WAD+C I+ H ER +R T VGQNIA+ + T D+N +I + +WY ++ + F+ G +TQ ++ M G + KY G NK + VCNYG GGN LG+ ++
Sbjct: 48 FMPNLEWDDELAAVAQRWADKC---IWGHD--------RERNVKRFT--------VGQNIAYLSTTGDINSLKIEEMVYMWYDEVVHYSKDDVLKFRNKGANGQPIGHYTQMIWAKTTK---MGCGAV-KYRDGNYNKF----YIVCNYGPGGNFLGQPLY 181
BLAST of va5_rhybr ame: full vs. nr
Match: gi|1000725979|ref|XP_015585577.1| (PREDICTED: venom allergen 3-like [Cephus cinctus]) HSP 1 Score: 65.4698 bits (158), Expect = 7.950e-8 Identity = 47/156 (30.13%), Postives = 70/156 (44.87%), Query Frame = 0
Query: 15 NSKWDDELARIAQIWADQCASVIYFHGSDMYPKVFHERGTERTTEAFRGPPGVGQNIAWALTKDVNFTQIID---DLWYRDISQVQPGHIEDFQ---QVGCGWTQFPVTDSSPIRMMNSGLLAKYGMGGENKTLFENFFVCNYGVGGNVLGESVFN 164
N WD EL ++AQ WA+QC G D T R + FR VGQN+A T+ T ++ DLWY ++ H+ ++ VG +TQ D+ ++ G + G N T + VCNYG GN++G ++N
Sbjct: 99 NITWDKELEQVAQRWANQCN-----FGHD----------TCRIVDRFR----VGQNVAIQATRGTTATSLLSRLVDLWYNEVKLFNNTHVSKYRFEPDVG-HYTQMIWADT---HLIGCGAIRYIASNGWNNT----YLVCNYGPAGNIIGRPIYN 227
BLAST of va5_rhybr ame: full vs. nr
Match: gi|1285007762|ref|XP_023015803.1| (uncharacterized protein LOC111505261 isoform X1 [Leptinotarsa decemlineata]) HSP 1 Score: 64.6994 bits (156), Expect = 8.545e-7 Identity = 45/154 (29.22%), Postives = 71/154 (46.10%), Query Frame = 0
Query: 18 WDDELARIAQIWADQCASVIYFHGSDMYPKVFHERGTERTTEAFRGPPGVGQNIAWALTKDVNFTQIIDDL--WYRDISQVQPGHIEDFQQVGCG------WTQFPVTDSSPIRMMNSGLLAKYGMGGENKTLFENFFVCNYGVGGNVLGESVF 163
WD+EL+ +AQ WADQC ++ D R T+ F VGQNI A+T + N +I + + WY+ +S V P I+ F + G +TQ + + G +N ++ + F+CNYG GNV+G ++
Sbjct: 92 WDEELSLMAQRWADQCVNINATFQHDFC----------RKTDRF----DVGQNILTAVTINSNLPEIANLILSWYKQVSDVIPSDIKYFSGIRRGQLVIGQYTQLVWAKTEYV-----GCALSVFKESKNNKVYNHRFICNYGPAGNVIGAPIY 226 The following BLAST results are available for this feature:
BLAST of va5_rhybr ame: full vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of va5_rhybr ame: full vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of va5_rhybr ame: full vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 6
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold202_size261857:118006..138066+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold202_size261857-snap-gene-1.20 ID=maker-scaffold202_size261857-snap-gene-1.20|Name=va5_rhybr ame: full|organism=Tigriopus kingsejongensis|type=gene|length=20061bp|location=Sequence derived from alignment at scaffold202_size261857:118006..138066+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'va5_rhybr ame: full' has the following synonyms
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