ribosomal protein l6, maker-scaffold209_size256900-snap-gene-0.21 (gene) Tigriopus kingsejongensis

Overview


Name	ribosomal protein l6
Unique Name	maker-scaffold209_size256900-snap-gene-0.21
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of ribosomal protein l6 vs. L. salmonis genes
Match: EMLSAG00000008775 (supercontig:LSalAtl2s:LSalAtl2s545:156635:171883:1 gene:EMLSAG00000008775 transcript:EMLSAT00000008775 description:"maker-LSalAtl2s545-augustus-gene-1.15")

HSP 1 Score: 260.766 bits (665), Expect = 1.720e-85
Identity = 135/251 (53.78%), Postives = 175/251 (69.72%), Query Frame = 0

Query:   15 MAKNKNKGQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            MAKNK  G+PRNY L SGV RFGKSK YHKKA+YKF  ++ PK+          +A R AK       + +KL+                      RRVRP++TPG +A+ILAG HKGKR+V+LK+L +G+LLI+GPFK+N CP+RRINQR+++AT+TK+DVS +K+PE +NDDYFRR++A KK A   G +FE KKEEYKPS++RKKDQ+E+DKQLL  I KH +   LK YL+ +F L+KGQYPH M F
Sbjct:  224 MAKNKXVGKPRNYKLASGVVRFGKSKMYHKKAIYKF-XRQLPKR----------RAHRIAK-------KPEKLS----------------------RRVRPTLTPGTIAVILAGIHKGKRIVILKELSSGMLLISGPFKLNNCPIRRINQRYLLATSTKLDVSSIKMPENINDDYFRRLRAAKKPA---GSVFEGKKEEYKPSEQRKKDQVEVDKQLLNVIMKHPEASLLKQYLKKSFGLSKGQYPHNMKF 431

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BLAST of ribosomal protein l6 vs. L. salmonis genes
Match: EMLSAG00000010697 (supercontig:LSalAtl2s:LSalAtl2s709:221051:258340:-1 gene:EMLSAG00000010697 transcript:EMLSAT00000010697 description:"snap_masked-LSalAtl2s709-processed-gene-2.4")

HSP 1 Score: 107.071 bits (266), Expect = 4.516e-29
Identity = 61/146 (41.78%), Postives = 86/146 (58.90%), Query Frame = 0

Query:   24 PRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIA 169
            P  YTL      +  S    +K + + +   TP +   ++  FVEK V G KNGG RM+ VKKL ND+PT ++ V   I     K   RV PS+TPG + +IL G HKGK  V+LK+  +G+  I+GPFK N   +R+INQR+++A
Sbjct:   19 PLQYTLSED---YSYSMEQIQKVILRLINT-TPIEVEASKHVFVEKKVGGTKNGGTRMLHVKKLKNDFPTMERLV-HRITNKPKKLSCRVCPSLTPGTIPVILEGIHKGKITVILKEFSSGIFCISGPFKRNNFLIRKINQRYLLA 159

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BLAST of ribosomal protein l6 vs. L. salmonis genes
Match: EMLSAG00000003793 (supercontig:LSalAtl2s:LSalAtl2s205:25104:25900:-1 gene:EMLSAG00000003793 transcript:EMLSAT00000003793 description:"maker-LSalAtl2s205-augustus-gene-0.1")

HSP 1 Score: 98.9821 bits (245), Expect = 1.651e-26
Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = 0

Query:   62 NQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRF 166
            ++PTFVEK V   KNG  RM  VKKL ND+PT  + V   I +   K   RVR ++TP    +I A  HKGKR+V+LK+  +G+LLI G FK+N CP++RINQR+
Sbjct:   15 SRPTFVEKKVERTKNGSIRMGCVKKLRNDFPTVHRRVHR-IAKKPTKLSCRVRSTLTPENXIVIHAXIHKGKRIVILKEFRSGILLICGAFKLNNCPIKRINQRY 118

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BLAST of ribosomal protein l6 vs. SwissProt
Match: gi|85542092|sp|Q2YGT9.3|RL6_PIG (RecName: Full=60S ribosomal protein L6)

HSP 1 Score: 211.846 bits (538), Expect = 8.929e-67
Identity = 121/249 (48.59%), Postives = 164/249 (65.86%), Query Frame = 0

Query:   25 RNYTLESGVARFGKSKTYHKKAVYK----FLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGI----KQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            RN  L  G+ R+ +S  Y +KA+YK      K K  KK        V K V G KNGG R+V+++K+   YPT+D  VP  +    K+ F+KHVR++R SITPG + IIL G H+GKRV+ LKQL +GLLL+TGP  +N  PLRR +Q+F+IAT+TK+D+SGVK+PE L D YF++ K  +K   +EG+IF+ +KE+Y+ S++RK DQ  +D Q+L  IK     QG   YLR  FALT G YPHK+ F
Sbjct:   42 RNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED--VPRKLLSHGKKPFSKHVRKLRASITPGTILIILTGRHRGKRVIFLKQLSSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKL-RKPRHQEGEIFDTEKEKYEISEQRKVDQKAVDSQILRRIKAVPQLQG---YLRSVFALTNGIYPHKLVF 284

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BLAST of ribosomal protein l6 vs. SwissProt
Match: gi|67461090|sp|Q58DQ3.3|RL6_BOVIN (RecName: Full=60S ribosomal protein L6)

HSP 1 Score: 209.534 bits (532), Expect = 8.005e-66
Identity = 120/249 (48.19%), Postives = 164/249 (65.86%), Query Frame = 0

Query:   25 RNYTLESGVARFGKSKTYHKKAVYK----FLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGI----KQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            RN  L  G+ R+ +S  Y +KA+YK      K K  KK        V K V G KNGG R+V+++K+   YPT+D  VP  +    K+ F+KHVR++R SITPG + IIL G H+GKRVV LKQL +GLLL+TGP  +N  PLRR +Q+F+IAT+TK+D+SGVK+PE L D YF++ K  +K   +EG+IF+ ++E+Y+ +++RK DQ  +D Q+L  IK     QG   YLR  FALT G YPHK+ F
Sbjct:   45 RNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED--VPRKLLSHGKKPFSKHVRKLRASITPGTILIILTGRHRGKRVVFLKQLGSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDTYFKKKKL-RKPRHQEGEIFDTEREKYEITEQRKVDQKAVDSQILRRIKAVPQLQG---YLRSVFALTNGIYPHKVVF 287

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BLAST of ribosomal protein l6 vs. SwissProt
Match: gi|62296680|sp|P47911.3|RL6_MOUSE (RecName: Full=60S ribosomal protein L6; AltName: Full=TAX-responsive enhancer element-binding protein 107; Short=TAXREB107)

HSP 1 Score: 209.149 bits (531), Expect = 1.417e-65
Identity = 120/250 (48.00%), Postives = 162/250 (64.80%), Query Frame = 0

Query:   25 RNYTLESGVARFGKSKTYHKKAVYK-----FLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGI----KQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            RN  L  G+ R+ +S  Y +KA+YK        K   KK        V K V G KNGG R+V+++K+   YPT+D  VP  +    K+ F++HVRR+R SITPG V IIL G H+GKRVV LKQL +GLLL+TGP  IN  PLRR +Q+F+IAT+TKVD+S VK+P+ L D YF++ K  +K   +EG+IF+ +KE+Y+ +++RK DQ  +D Q+L  IK     QG   YLR  F+LT G YPHK+ F
Sbjct:   53 RNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGTRVVKLRKMPRYYPTED--VPRKLLSHGKKPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHLTDAYFKK-KQLRKPRHQEGEIFDTEKEKYEITEQRKADQKAVDLQILPKIKAVPQLQG---YLRSQFSLTNGMYPHKLVF 296

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BLAST of ribosomal protein l6 vs. SwissProt
Match: gi|71153689|sp|Q6QMZ4.3|RL6_CHILA (RecName: Full=60S ribosomal protein L6)

HSP 1 Score: 207.994 bits (528), Expect = 2.776e-65
Identity = 121/257 (47.08%), Postives = 167/257 (64.98%), Query Frame = 0

Query:   22 GQP---RNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQP------TFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGI----KQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            GQP   RN  L  G+ R+ +S  Y +KA+YK  +K T  K+   +         V K V G KNGG R+V+++K+   YPT+D  VP  +    K+ F++HVR++R SITPG V IIL G H+GKRVV LKQL +GLLL+TGP  +N  PLRR +Q+F+IAT+TK+D+S VK+P+ L D YF++ K  +K   +EG+IF+ +KE Y+ S++RK DQ  +D Q+L  IK       L+ YLR  FALT G YPHK+ F
Sbjct:   40 GQPHCSRNPVLVRGIGRYSRSAMYSRKALYK--RKYTAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED--VPRKLLSHGKKPFSQHVRKLRASITPGTVLIILTGRHRGKRVVFLKQLASGLLLVTGPLNLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKL-RKPRHQEGEIFDTEKERYQISEQRKVDQKAVDSQILPKIKAVPQ---LRGYLRSVFALTNGIYPHKLVF 288

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BLAST of ribosomal protein l6 vs. SwissProt
Match: gi|55584134|sp|P21533.5|RL6_RAT (RecName: Full=60S ribosomal protein L6; AltName: Full=Neoplasm-related protein C140)

HSP 1 Score: 207.608 bits (527), Expect = 5.455e-65
Identity = 119/250 (47.60%), Postives = 162/250 (64.80%), Query Frame = 0

Query:   25 RNYTLESGVARFGKSKTYHKKAVYK-----FLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGI----KQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            RN  L  G+ R+ +S  Y +KA+YK        K   KK        V K V G KNGG R+V+++K+   YPT+D  VP  +    K+ F++HVRR+R SITPG V IIL G H+GKRVV LKQL +GLLL+TGP  +N  PLRR +Q+F+IAT+TKVD+S VK+P+ L D YF++ K  +K   +EG+IF+ +KE+Y+ +++RK DQ  +D Q+L  IK     QG   YLR  F+LT G YPHK+ F
Sbjct:   55 RNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGTRVVKLRKMPRYYPTED--VPRKLLSHGKKPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLRRTHQKFVIATSTKVDISKVKIPKHLTDAYFKK-KPLRKPRHQEGEIFDTEKEKYEITEQRKADQKAVDSQILPKIKAVPQLQG---YLRSQFSLTNGMYPHKLVF 298

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BLAST of ribosomal protein l6 vs. SwissProt
Match: gi|1350762|sp|Q02878.3|RL6_HUMAN (RecName: Full=60S ribosomal protein L6; AltName: Full=Large ribosomal subunit protein eL6; AltName: Full=Neoplasm-related protein C140; AltName: Full=Tax-responsive enhancer element-binding protein 107; Short=TaxREB107)

HSP 1 Score: 204.142 bits (518), Expect = 9.386e-64
Identity = 118/249 (47.39%), Postives = 163/249 (65.46%), Query Frame = 0

Query:   25 RNYTLESGVARFGKSKTYHKKAVYK----FLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGI----KQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            RN  L  G+ R+ +S  Y +KA+YK      K K  KK        V K V G KNGG R+V+++K+   YPT+D  VP  +    K+ F++HVR++R SITPG + IIL G H+GKRVV LKQL +GLLL+TGP  +N  PLRR +Q+F+IAT+TK+D+S VK+P+ L D YF++ K  +K   +EG+IF+ +KE+Y+ +++RK DQ  +D Q+L  IK     QG   YLR  FALT G YPHK+ F
Sbjct:   46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED--VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKL-RKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQG---YLRSVFALTNGIYPHKLVF 288

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BLAST of ribosomal protein l6 vs. SwissProt
Match: gi|1350761|sp|P47991.1|RL6_CAEEL (RecName: Full=60S ribosomal protein L6)

HSP 1 Score: 170.244 bits (430), Expect = 2.028e-51
Identity = 90/155 (58.06%), Postives = 113/155 (72.90%), Query Frame = 0

Query:  113 VRPSITPGVVAIILAGAHKGKRVVVLKQLP-TGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEG-DIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            +R ++TPG V I+LAG HKGKRVV LKQLP +GLLL+TGP KING PLRRI Q F+IAT+ KV+VSGVK+PE +ND+YF+R    K  A+K G +IF + K EY  S++RKKD   +D  +L AIKKH + + L  YL   F+L K QYPHKM F
Sbjct:   67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATSLKVNVSGVKIPEHINDEYFKR----KSTAQKTGKNIFASGKTEYTVSEQRKKDIKTVDAPILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQF 217

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BLAST of ribosomal protein l6 vs. SwissProt
Match: gi|464621|sp|P34091.1|RL6_MESCR (RecName: Full=60S ribosomal protein L6; AltName: Full=YL16-like)

HSP 1 Score: 154.451 bits (389), Expect = 5.580e-45
Identity = 108/251 (43.03%), Postives = 144/251 (57.37%), Query Frame = 0

Query:   16 AKNKNKGQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKP-SDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            AK +     RN  L  G+ ++ +SK YHK+ ++    K        N   F + A + A +       V+K    YP  D   P   K+       ++R SITPG V IILAG  KGKRVV LKQL +GLLL+TGPFK+NG PLRR+NQ ++IAT+TKVD+SGV V EK +D YF +    KK  K EG+ FEA+K+E      E+K DQ  +D  LL+AI+   +   LKAYL   F+L  G  PH++ F
Sbjct:    4 AKQRKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAK--------NGGVFPKHAPKSADSKA-----VEKPPKFYPADDVKKPLINKR--KPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNV-EKFDDKYFGKKAE-KKNKKGEGEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEGVPE---LKAYLGARFSLKAGMKPHELVF 234

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BLAST of ribosomal protein l6 vs. SwissProt
Match: gi|74851017|sp|Q54D63.1|RL6_DICDI (RecName: Full=60S ribosomal protein L6)

HSP 1 Score: 146.362 bits (368), Expect = 7.037e-42
Identity = 86/174 (49.43%), Postives = 111/174 (63.79%), Query Frame = 0

Query:   97 HVPTGIKQYFAKHVRR---VRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFE--AKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
             +P  I+   AK V++   +R SITPG V IILAG   GKRVV LKQL +GL+LITGPFK+NG PLRRI+QR++IAT+TK+DVS VKV   +ND YF   K  K   K EG  F    K E+ K +D R  DQ  +D  +L  +KK    + L  YL+  F L KG++PH++ F
Sbjct:   68 SIPAEIRSTAAKKVQQKVALRKSITPGTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEK--KSTTKSEGAFFSDEKKAEKKKIADSRVADQKSVDSAILAVLKKE---KFLTVYLKTKFYLKKGEFPHQLKF 236

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BLAST of ribosomal protein l6 vs. SwissProt
Match: gi|353678102|sp|P0DJ56.1|RL6_TETTS (RecName: Full=60S ribosomal protein L6)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-38
Identity = 81/184 (44.02%), Postives = 109/184 (59.24%), Query Frame = 0

Query:   84 VKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGK--KQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            V K++  Y   D+  P   +Q       ++R  I PG V I+LAG  +GKRVV LKQL +GLLL+TGP+K+NG PL+R+NQ + ++T+TKVD++GV    K  DDYF R KA K  K   K     E KK+E +  + RK+DQ  +D  LL A+KK    + LK YL   F L     PH+M F
Sbjct:   12 VSKISKWYKADDEATPFHRRQLKKATATKLRNDIAPGTVLILLAGRFRGKRVVFLKQLKSGLLLVTGPYKVNGVPLKRVNQAYTLSTSTKVDLTGVNTA-KFEDDYFGREKARKNHKNLFKAELTEEQKKKETERKNARKQDQQAVDTPLLAAVKKV---EFLKNYLASKFTLNNNDRPHEMKF 191

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BLAST of ribosomal protein l6 vs. nr
Match: gi|961376286|gb|ALS04887.1| (60S ribosomal protein L6 [Pseudodiaptomus poplesia])

HSP 1 Score: 335.109 bits (858), Expect = 2.943e-113
Identity = 167/256 (65.23%), Postives = 200/256 (78.12%), Query Frame = 0

Query:   15 MAKNKNKGQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGI-----KQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            MAKNKNKG+PRNY L+SGV RF  SK +HKKA++KFLKK   KK +  +P FVEK ++G KNGG RMVRVKKL N+ PT D  V T I     K  F+KH R++RPS+TPGVVAIILAG HKGKRVVVLKQL TGLLLITGP K+NGCPLRRINQR+++AT T ++VSGVKVPE +ND YF R+K+  K  KK+G+IFE KKE+YKPS++RK DQ  +DKQ+LEAIKKH  G  LK+Y +  F L KG+YPHKM F
Sbjct:    1 MAKNKNKGKPRNYALDSGVYRFSASKMFHKKAIHKFLKKTVAKKPADKKPVFVEKKIKGDKNGGTRMVRVKKLTNNVPTMD--VKTCILHTKGKSVFSKHSRKLRPSLTPGVVAIILAGVHKGKRVVVLKQLETGLLLITGPLKLNGCPLRRINQRYLLATKTSINVSGVKVPETINDKYFARVKSDNK-VKKDGNIFENKKEDYKPSEQRKADQASVDKQVLEAIKKHPQGAALKSYFKAGFGLNKGEYPHKMIF 253

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BLAST of ribosomal protein l6 vs. nr
Match: gi|1148369146|gb|AQS22809.1| (60S ribosomal protein l6 [Pseudodiaptomus poplesia])

HSP 1 Score: 334.724 bits (857), Expect = 3.650e-113
Identity = 165/252 (65.48%), Postives = 198/252 (78.57%), Query Frame = 0

Query:   15 MAKNKNKGQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQD-KHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            MAKNKNKG+PRNY L+SGV RF  SK +HKKA++KFLKK   KK +  +P FVEK ++G KNGG RMVRVKKL N+ PT D K   T  K  F+KH R++RPS+TPGVV IILAG HKGKRVVVLKQL TGLLLITGP K+NGCPLRRINQR+++AT T ++VSGVKVPE +ND YF R+K+  K  KK+G+IFE KKE+YKPS++RK DQ  +DKQ+LEAIKKH  G  LK+Y +  F L KG+YPHKM F
Sbjct:    1 MAKNKNKGKPRNYALDSGVYRFSASKMFHKKAIHKFLKKTVAKKPADKKPVFVEKKIKGDKNGGTRMVRVKKLTNNVPTMDLKKKNTTRKSVFSKHSRKLRPSLTPGVVVIILAGVHKGKRVVVLKQLETGLLLITGPLKLNGCPLRRINQRYLLATKTSINVSGVKVPETINDKYFARVKSDNK-VKKDGNIFENKKEDYKPSEQRKADQASVDKQVLEAIKKHPQGAALKSYFKAGFGLNKGEYPHKMIF 251

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BLAST of ribosomal protein l6 vs. nr
Match: gi|961375738|gb|ALS04613.1| (60S ribosomal protein L6 [Pseudodiaptomus poplesia])

HSP 1 Score: 331.643 bits (849), Expect = 7.027e-112
Identity = 165/256 (64.45%), Postives = 199/256 (77.73%), Query Frame = 0

Query:   15 MAKNKNKGQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGI-----KQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            MAKNKNKG+PRNY L+SGV RF  SK +HKKA++KFLKK   KK +  +P FVEK ++G KNGG RMVRVKKL N+ PT D  V T I     K  F+KH R++RPS+TPGVVAIILAG HKGKRVV LKQL TGLLLITGP K+NGCPLRRINQR+++AT T ++VSGVKVPE +ND YF R+K+  K  KK+G+IFE KKE+YKPS++RK D+  +DKQ+LEAIKKH  G  LK+Y +  F L KG+YPHKM F
Sbjct:    1 MAKNKNKGKPRNYALDSGVYRFSASKMFHKKAIHKFLKKTVAKKPADKKPVFVEKKIKGDKNGGTRMVRVKKLTNNVPTMD--VKTCILHTKRKSVFSKHSRKLRPSLTPGVVAIILAGVHKGKRVVALKQLETGLLLITGPLKLNGCPLRRINQRYLLATKTSINVSGVKVPETINDKYFARVKSDNK-VKKDGNIFENKKEDYKPSEQRKADRASVDKQVLEAIKKHPQGAALKSYFKAGFGLNKGEYPHKMIF 253

[Close]

BLAST of ribosomal protein l6 vs. nr
Match: gi|961376190|gb|ALS04839.1| (60S ribosomal protein L6 [Pseudodiaptomus poplesia])

HSP 1 Score: 320.087 bits (819), Expect = 2.187e-107
Identity = 161/248 (64.92%), Postives = 193/248 (77.82%), Query Frame = 0

Query:   15 MAKNKNKGQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGI-----KQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKG 257
            MAKNKNKG+PRNY L+SGV RF  SK +HKKA++KFLKK   KK +  +P FVEK ++G KNGG RMVRVKKL N+ PT D  V T I     K  F+KH R++RPS+TPGVVAIILAG HKGKRVVVLKQL TGLLLITGP K+NGCPLRRINQR+++AT T ++VSGVKVPE +ND YF R+K+  K  KK+G+IFE KKE+YKPS++RK DQ  +DKQ+LEAIKKH  G  LK+Y +  F L KG
Sbjct:    1 MAKNKNKGKPRNYALDSGVYRFSASKMFHKKAIHKFLKKTVAKKPADKKPVFVEKKIKGDKNGGTRMVRVKKLTNNVPTMD--VKTCILHTKRKSVFSKHSRKLRPSLTPGVVAIILAGVHKGKRVVVLKQLETGLLLITGPLKLNGCPLRRINQRYLLATKTSINVSGVKVPETINDKYFARVKSDNK-VKKDGNIFENKKEDYKPSEQRKADQASVDKQVLEAIKKHPQGAALKSYFKAGFGLNKG 245

[Close]

BLAST of ribosomal protein l6 vs. nr
Match: gi|961375432|gb|ALS04460.1| (60S ribosomal protein L6 [Acartia pacifica] >gi|961375434|gb|ALS04461.1| 60S ribosomal protein L6 [Acartia pacifica])

HSP 1 Score: 316.235 bits (809), Expect = 9.084e-106
Identity = 158/251 (62.95%), Postives = 187/251 (74.50%), Query Frame = 0

Query:   15 MAKNKNKGQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            MAKNKNKG PRNYTL SGV+RF KS  YHKKA+YKFLKKK P K    +  FVEK V GAKNG  RMVRV+KLANDYPT  K V    +     H  ++R S+ PGVVAI+LAG HKGK VVVLKQL +GLLL+TGPFK+NGCPLRRINQR++IAT T VD+SGVKVP+ LNDDYFRR+KA  +  KK+G   E KK +Y  S++RKKDQ+E+DKQ++  + KH +   +K YL   F L KGQYPHKM F
Sbjct:    1 MAKNKNKGNPRNYTLASGVSRFSKSAMYHKKAIYKFLKKKAPAKKGERKAVFVEKKVGGAKNGETRMVRVRKLANDYPTATKLVGKKNRSCHKSHTAKLRKSLAPGVVAIVLAGNHKGKHVVVLKQLESGLLLVTGPFKLNGCPLRRINQRYVIATKTTVDISGVKVPDTLNDDYFRRVKA-TENVKKDGVFSENKKVKYTISEQRKKDQVEVDKQVMAVLGKHPESAMMKQYLASQFKLQKGQYPHKMIF 250

[Close]

BLAST of ribosomal protein l6 vs. nr
Match: gi|1339067834|ref|XP_023721010.1| (60S ribosomal protein L6 isoform X1 [Cryptotermes secundus] >gi|1339067836|ref|XP_023721011.1| 60S ribosomal protein L6 isoform X1 [Cryptotermes secundus] >gi|1339067838|ref|XP_023721012.1| 60S ribosomal protein L6 isoform X1 [Cryptotermes secundus] >gi|1330885975|gb|PNF19750.1| hypothetical protein B7P43_G14752 [Cryptotermes secundus] >gi|1330885976|gb|PNF19751.1| hypothetical protein B7P43_G14752 [Cryptotermes secundus] >gi|1330885977|gb|PNF19752.1| hypothetical protein B7P43_G14752 [Cryptotermes secundus])

HSP 1 Score: 279.256 bits (713), Expect = 5.585e-91
Identity = 138/250 (55.20%), Postives = 180/250 (72.00%), Query Frame = 0

Query:   16 AKNKNKGQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            A+ K  G+PRNY L +GV RF +S+ YHKKA+YKF+ KKT KK    +P  +EK + G KNG  R+V ++K  N YPT DK  P   K+ F++H R  RP++TPG + I+LAG HKGKRVV+LK L +GLLL+TGPFKIN CPLRRI+Q F+IAT+TK+D+SGVK+P+ +ND YFRR +  K+  K EGDIF  KKE YKPSD+RK DQ  +DKQ++E I+KH + + + AY    F L   QYPH+M F
Sbjct:   25 AEKKKPGKPRNYDLGNGVYRFSRSRMYHKKALYKFIGKKTEKKVKPVKPLTIEKKIGGEKNGETRIVLLRKRRNYYPTADKIKPHHSKKLFSQHKRYTRPTLTPGTICILLAGPHKGKRVVLLKVLASGLLLVTGPFKINACPLRRISQNFVIATSTKLDISGVKLPDTINDKYFRRNRQ-KRAKKAEGDIFNTKKEAYKPSDQRKADQQAVDKQIIEVIRKHPEKKHIFAYFSAMFGLRSSQYPHRMKF 273

[Close]

BLAST of ribosomal protein l6 vs. nr
Match: gi|264667343|gb|ACY71257.1| (ribosomal protein L6 [Chrysomela tremula])

HSP 1 Score: 276.944 bits (707), Expect = 3.637e-90
Identity = 139/249 (55.82%), Postives = 178/249 (71.49%), Query Frame = 0

Query:   17 KNKNKGQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            KN   G+PRNY L +GV RF K++ +HKKA+YKFL KK        +P  VEK + G KNGGKR V VKK    YPTQD+  P   K+YF++H R +R +ITPG + I+LAG+HKGKRVV LKQL +GLLL+TGPF IN CPLRRI+QR++IATATK+D+S VK+PE +ND YF R K  K+  K+EGDIF+ KKE YK S+ RK DQ  +D Q++ A+KKH+D + L AYL   + L   QYPH++ F
Sbjct:   17 KNHKPGKPRNYDLGNGVVRFSKTRMFHKKAIYKFLGKKVKAPKKPQKPRVVEKQIGGEKNGGKRFVLVKKRCASYPTQDRIKPRPAKKYFSQHKRTLRDTITPGTILILLAGSHKGKRVVFLKQLYSGLLLVTGPFGINACPLRRISQRYVIATATKIDISEVKLPENINDKYFER-KREKRAKKEEGDIFQTKKEGYKVSEVRKTDQKTVDTQVMAAVKKHADHKVLLAYLSAMWGLRSSQYPHRLKF 264

[Close]

BLAST of ribosomal protein l6 vs. nr
Match: gi|1272206509|gb|ATP16159.1| (putative 60S ribosomal protein L6 [Leptinotarsa decemlineata])

HSP 1 Score: 276.559 bits (706), Expect = 6.862e-90
Identity = 141/242 (58.26%), Postives = 178/242 (73.55%), Query Frame = 0

Query:   24 PRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            PRNY L +GV RF ++K +HKKA+YKF+ KKT       +   VEK + G KNG KR+V VKK    YPTQDK  P   ++YF++H R +R SITPG V I+LAG+HKGKRVV LKQL +GLLL+TGPF IN CPLRRI+QR++IAT TKVDVS V++P K+ND+YF R K  K+  K+EGDIF+ KKE YK SDERK+DQ ++DKQ+LEAI+ H D + LKAYL   + L   QYPH++ F
Sbjct:   29 PRNYDLGNGVLRFSRTKMFHKKAIYKFIGKKTKAAPKKKEIVVVEKPIGGEKNGEKRIVLVKKRRASYPTQDKIKPRPARKYFSQHKRSLRSSITPGTVLILLAGSHKGKRVVFLKQLYSGLLLVTGPFTINACPLRRISQRYVIATQTKVDVSKVEIPAKINDEYFAR-KREKRAKKEEGDIFQTKKEGYKVSDERKQDQEQLDKQILEAIRGHPDRKVLKAYLSAMWGLRSSQYPHRLKF 269

[Close]

BLAST of ribosomal protein l6 vs. nr
Match: gi|961349812|gb|ALR99800.1| (putative ribosomal protein L6 [Phaedon cochleariae])

HSP 1 Score: 274.633 bits (701), Expect = 3.407e-89
Identity = 135/244 (55.33%), Postives = 177/244 (72.54%), Query Frame = 0

Query:   22 GQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
            G+PRNY L +GV RF +++ +HKKA+YKF+ KK        +P  +EK + G KNGGKR V VKK    YPTQD+  P   K+ F++H R +R +ITPG + I+LAG+HKGKRVV LKQL +GLLL+TGPF IN CPLRRI+QR++IATATKVD+S VK+PE +ND YF R K  K+  K+EGDIF++KKE YK S+ERK DQ  +D Q++ AI+KH+D + L AYL   + L   QYPH++ F
Sbjct:   22 GKPRNYDLGNGVVRFSRTRMFHKKAIYKFIGKKVAATKKPQKPRVIEKQIGGEKNGGKRFVLVKKRRASYPTQDRIRPRPAKKSFSQHKRTLRDTITPGTILILLAGSHKGKRVVFLKQLHSGLLLVTGPFGINACPLRRISQRYVIATATKVDISEVKLPENINDKYFER-KREKRAKKEEGDIFQSKKEGYKVSEERKTDQKTVDTQIMAAIRKHADRKVLLAYLSAMWGLRSSQYPHRLNF 264

[Close]

BLAST of ribosomal protein l6 vs. nr
Match: gi|1227100186|gb|OXU23907.1| (hypothetical protein TSAR_014548 [Trichomalopsis sarcophagae])

HSP 1 Score: 273.478 bits (698), Expect = 1.224e-88
Identity = 136/244 (55.74%), Postives = 176/244 (72.13%), Query Frame = 0

Query:   22 GQPRNYTLESGVARFGKSKTYHKKAVYKFLKKKTPKKASTNQPTFVEKAVRGAKNGGKRMVRVKKLANDYPTQDKHVPTGIKQYFAKHVRRVRPSITPGVVAIILAGAHKGKRVVVLKQLPTGLLLITGPFKINGCPLRRINQRFIIATATKVDVSGVKVPEKLNDDYFRRIKAGKKQAKKEGDIFEAKKEEYKPSDERKKDQLEMDKQLLEAIKKHSDGQGLKAYLRHNFALTKGQYPHKMTF 265
             +PRNY L +GV RF +S+ YHKKA+YKF+ KKTPKK    +   +EK + G KNGG R V +KK   +YPT D  VP   K+ F  H R VRPS+ PG V I+LAG HKGKRVV+LK L +GLLL+TGPF IN CP+RRINQ ++IAT+T++++SG K+P+ +NDDYF+R K  K+  K+EGDIF  KKEEYKPS++RK DQ  +DK +++AIKK +D + L AYL   F L   QYPH+M F
Sbjct:   31 SRPRNYNLGNGVYRFSRSRMYHKKAIYKFIGKKTPKKEVPKKLVSIEKKINGEKNGGTRTVLLKKRKANYPTSDPIVPHPTKKCFKDHTRYVRPSLKPGTVLILLAGPHKGKRVVLLKALKSGLLLVTGPFLINACPMRRINQIYVIATSTRINLSGFKLPKHINDDYFKR-KHEKRAKKEEGDIFAKKKEEYKPSEQRKVDQKVIDKAVIDAIKKSADKKVLFAYLASMFGLRSSQYPHRMKF 273

The following BLAST results are available for this feature:

BLAST of ribosomal protein l6 vs. L. salmonis genes
BLAST of ribosomal protein l6 vs. SwissProt
BLAST of ribosomal protein l6 vs. nr

BLAST of ribosomal protein l6 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3


Match Name	E-value	Identity	Description
EMLSAG00000008775	1.720e-85	53.78	supercontig:LSalAtl2s:LSalAtl2s545:156635:171883:1...	[more]
EMLSAG00000010697	4.516e-29	41.78	supercontig:LSalAtl2s:LSalAtl2s709:221051:258340:-...	[more]
EMLSAG00000003793	1.651e-26	50.48	supercontig:LSalAtl2s:LSalAtl2s205:25104:25900:-1 ...	[more]

BLAST of ribosomal protein l6 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 16


Match Name	E-value	Identity	Description
gi\|85542092\|sp\|Q2YGT9.3\|RL6_PIG	8.929e-67	48.59	RecName: Full=60S ribosomal protein L6	[more]
gi\|67461090\|sp\|Q58DQ3.3\|RL6_BOVIN	8.005e-66	48.19	RecName: Full=60S ribosomal protein L6	[more]
gi\|62296680\|sp\|P47911.3\|RL6_MOUSE	1.417e-65	48.00	RecName: Full=60S ribosomal protein L6; AltName: F...	[more]
gi\|71153689\|sp\|Q6QMZ4.3\|RL6_CHILA	2.776e-65	47.08	RecName: Full=60S ribosomal protein L6	[more]
gi\|55584134\|sp\|P21533.5\|RL6_RAT	5.455e-65	47.60	RecName: Full=60S ribosomal protein L6; AltName: F...	[more]
gi\|1350762\|sp\|Q02878.3\|RL6_HUMAN	9.386e-64	47.39	RecName: Full=60S ribosomal protein L6; AltName: F...	[more]
gi\|1350761\|sp\|P47991.1\|RL6_CAEEL	2.028e-51	58.06	RecName: Full=60S ribosomal protein L6	[more]
gi\|464621\|sp\|P34091.1\|RL6_MESCR	5.580e-45	43.03	RecName: Full=60S ribosomal protein L6; AltName: F...	[more]
gi\|74851017\|sp\|Q54D63.1\|RL6_DICDI	7.037e-42	49.43	RecName: Full=60S ribosomal protein L6	[more]
gi\|353678102\|sp\|P0DJ56.1\|RL6_TETTS	1.264e-38	44.02	RecName: Full=60S ribosomal protein L6	[more]

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BLAST of ribosomal protein l6 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|961376286\|gb\|ALS04887.1\|	2.943e-113	65.23	60S ribosomal protein L6 [Pseudodiaptomus poplesia...	[more]
gi\|1148369146\|gb\|AQS22809.1\|	3.650e-113	65.48	60S ribosomal protein l6 [Pseudodiaptomus poplesia...	[more]
gi\|961375738\|gb\|ALS04613.1\|	7.027e-112	64.45	60S ribosomal protein L6 [Pseudodiaptomus poplesia...	[more]
gi\|961376190\|gb\|ALS04839.1\|	2.187e-107	64.92	60S ribosomal protein L6 [Pseudodiaptomus poplesia...	[more]
gi\|961375432\|gb\|ALS04460.1\|	9.084e-106	62.95	60S ribosomal protein L6 [Acartia pacifica] >gi\|96...	[more]
gi\|1339067834\|ref\|XP_023721010.1\|	5.585e-91	55.20	60S ribosomal protein L6 isoform X1 [Cryptotermes ...	[more]
gi\|264667343\|gb\|ACY71257.1\|	3.637e-90	55.82	ribosomal protein L6 [Chrysomela tremula]	[more]
gi\|1272206509\|gb\|ATP16159.1\|	6.862e-90	58.26	putative 60S ribosomal protein L6 [Leptinotarsa de...	[more]
gi\|961349812\|gb\|ALR99800.1\|	3.407e-89	55.33	putative ribosomal protein L6 [Phaedon cochleariae...	[more]
gi\|1227100186\|gb\|OXU23907.1\|	1.224e-88	55.74	hypothetical protein TSAR_014548 [Trichomalopsis s...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold209_size256900	supercontig	scaffold209_size256900:65702..68334 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold209_size256900-snap-gene-0.21-mRNA-1	maker-scaffold209_size256900-snap-gene-0.21-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold209_size256900:65702..68334-

gene from alignment at scaffold209_size256900:65702..68334-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold209_size256900-snap-gene-0.21 ID=maker-scaffold209_size256900-snap-gene-0.21|Name=ribosomal protein l6|organism=Tigriopus kingsejongensis|type=gene|length=2633bp|location=Sequence derived from alignment at scaffold209_size256900:65702..68334- (Tigriopus kingsejongensis)
GGAAAACATCAGTCGGCCTGTCAGCTGCTGAGCTTCCTTTTCAGTTGCGT
TACAGCCAAGGTAAGTGGTAAATAAATGTCGGGACACGAGCAATCCATGA
AAATCGGGCCCATCCCGCCGGCTTGGTTGGAAATTCACGCTGGGACCCGC
TGTCATCGCCACCCACCTCTCATGCCCGCCTCTTTCGCAGGACACGATGG
CCAAGAACAAGAATAAGGGCCAGCCCCGTAACTACACCCTGGAGTCGGGG
GTTGCCCGCTTCGGCAAGTCCAAGACCTACCACAAGAAGGCCGTGTACAA
GTTCTTGAAGAAGAAGACCCCCAAGAAGGCCTCGACCAACCAGCCCACTT
TCGTGGAGAAGGCGGTCCGCGGAGCCAAGAACGGCGGCAAGCGCATGGTC
CGCGTCAAGAAGCTGGCCAACGACTACCCCACGCAGGACAAGTAAGCGTC
CGTGAGGCTCAATTGCGCACGACCCAGCGCTGGGACATTGTTTCGGGAGC
TGATGAGCCACACTCAAGTCCAACCCCATACCCGGTTATGCGGCCCGAGA
GGCTTGGACGCGTGGGACATTTGAATCAATCGGACCTACCCATGCGGTTC
AACCCGCTTTTCAGGGCCCTCGGGGTTTGGTCGAATTCATGGGTCAGTCC
AGTCTTCACTGTTGGATGAATTCTGTCCGTTGAGCCTGATCGTCGCTAAG
ATTGGACGGTCACATGACATGAATGAAGACTATCCGAGGCGGGTCCGCCA
CTAACTATTGTTGGGGCCCTGTCCATAGCGACTACTTAACACAGAACCGC
TCCCGAGTTGTTTCGAAGACTCTAGTCCAGGCTGAGACACTGGTCCGCCG
TAAAACTTGAACCACCCGGGTTGGTCCTCTCAGAATTTGGGGTCAAATGG
GGGCAGTTGACTTTGGGCGAAACGGAGATTGAGATCAAGTCCACTGGCCC
ACCGTGGAAGTCATTGGCTTTAGCGGTAAACCAGTGTCGCCCAGCGCTGG
GACCAATGTTCCCATCTATGATGATCCATACTAATAGGAAATGCCGTCTG
ACACACACATGAAGCTATCTTAATCTCTGAGACCGGTTTCAAGTGTCGCT
GAGCTGACCCACCCGCGGAATCGACTCCTCATTCCCGTTTGTCCTTACAG
GCACGTGCCCACTGGCATCAAGCAGTACTTTGCCAAGCACGTCCGACGAG
TGCGCCCCTCCATCACCCCCGGCGTGGTGGCCATCATCTTGGCCGGTGCC
CACAAGGGCAAGCGCGTGGTCGTGCTTAAGCAGCTGCCCACGGGACTCCT
CTTGATCACGGGTAAGTGCGGCTGGTTGAATGGAGAGCTAGGCACCCAAT
GCAAGGCGGTGAGAACGTTCGACCGCCTCATCGCCAAGACCGGGCTGCTA
GATCGATTGTGCCCGGCCGTCCACCGGTGGTGGTGGATCAAATCACCCGC
CATGACCTCGACGGCTGGGAGCACACTTTTTCATACTTCAAGCGAGGTGA
CGAGGCGACAGCCAATGAATCACCGGTTGATAGTTGACCAGCTATTGTAA
GGGATCATTCACATGCAGTGCGAGTCTCTGCTAGATCAGTGCGAATCGCT
CGACGAGACGCTTGCTTTTCCCAACATTGTGAGACCATAAGCCACGTTTA
AGAGTCATTTGGCGACTCAGACCAGTCAGTAGCCGCTTGGTTTCATGATT
TAGGCTGGACTTGCAGTTGACGGGCCAGTTTATTTCAATACCGTAGGCAA
GTATTACCATCCAACAGATATACTCTTTTCTTAATCATGAAGTGGGAGAG
GCCAAAGCTCCGCCACGCCACTGATTGGGAACGTTTCCAAAGAATTTTCC
ATTAATTAGTCAACCTGGGCCATTATTCGAATTCAACCGCCCGAAAAACT
TCGAGGAAAGTACGAAAGTTACTCCAACCCAAGCACTCGGTACCCTCTGC
GTACCCAGTATTATTGAATCGGCTCCAGCAGTTCAAATTCAGTATGACTA
GGCCTGTGGGAGGCTAGAAGTCGATTAGACATTTTTCGTCGTAATTAACG
GGAAGCATATCTATCCACTTTTCTCAGCGATCGTCCAGGAGTCTGAAAAT
CCACTTGCGATTTTTCCAGTTTTGGTGCTAGACCATCTCGTTGCTCTCCG
GGACCCAGCTCTTACTTGGCCGCGACTTGATGTTTGTTTCTTGTTGCAGG
TCCCTTCAAGATCAATGGCTGTCCTCTTCGACGCATCAATCAGCGCTTCA
TCATTGCCACCGCCACCAAGGTGGACGTGTCCGGCGTGAAGGTGCCCGAG
AAGTTGAACGACGACTACTTCCGTCGCATCAAGGCTGGCAAGAAGCAGGC
TAAGAAGGAGGGAGACATCTTCGAGGCCAAGAAGGAGGAGTACAAGCCTT
CTGATGAGCGCAAGAAGGACCAGCTGGAGATGGACAAGCAGTTGCTGGAA
GCCATCAAGAAGCACTCCGACGGCCAGGGCCTGAAGGCCTATCTGAGGCA
CAACTTTGCTCTCACCAAAGGACAGTATCCTCACAAAATGACCTTCTAGA
TCCGAGTATACTGTCTTGTTCCATCGAAAATATAAAACCCTGGGATAAAA
CTACTGTCCTGTGTGGTCTTCACCCGACGTTAT

Synonyms

The feature 'ribosomal protein l6' has the following synonyms


Synonym
Tk05655

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