hiv tat-specific factor 1-like protein, maker-scaffold270_size230592-snap-gene-1.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hiv tat-specific factor 1-like protein vs. L. salmonis genes
Match: EMLSAG00000000631 (supercontig:LSalAtl2s:LSalAtl2s109:798559:802919:-1 gene:EMLSAG00000000631 transcript:EMLSAT00000000631 description:"maker-LSalAtl2s109-snap-gene-8.35") HSP 1 Score: 125.176 bits (313), Expect = 2.145e-33 Identity = 69/169 (40.83%), Postives = 90/169 (53.25%), Query Frame = 0 Query: 41 FTDPHTQAVYVLNPAGTDWLPLAEADQAPPPASQPSDPAQPSPYRFDGQTYTHR-RADGQRFKWDLVEQSWAEDNSGQSSEESELDSGDEAPRLTEAEQKERAYRQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGFTPD 208 +TDP T+ YVLN + TDW+P E D Y FDG+TY HR + G++ +W+L + W + ESELDS E + ++A PGW N LKD +TG + Y+D DG YEWD +KNAWFP+ID +FMA YQLN GF D Sbjct: 35 YTDPWTKKEYVLNSSKTDWVPREETD-----------------YEFDGKTYIHRDKKTGRKRRWNLDSKEW-------ETSESELDSDSENEKPI----------VKKAMPGWNPDKNILKDNDTGVQTYKDPVDGTTYEWDSDKNAWFPKIDSEFMAXYQLNXGFXSD 169
BLAST of hiv tat-specific factor 1-like protein vs. SwissProt
Match: gi|81913100|sp|Q8BGC0.1|HTSF1_MOUSE (RecName: Full=HIV Tat-specific factor 1 homolog) HSP 1 Score: 53.9138 bits (128), Expect = 1.792e-7 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0 Query: 178 YEWDREKNAWFPRIDEDFMAQYQLNYGFTPD 208 YEWD +K AWFP+I EDF+A YQ NYGF+ D Sbjct: 51 YEWDLDKKAWFPKITEDFIATYQANYGFSSD 81
BLAST of hiv tat-specific factor 1-like protein vs. SwissProt
Match: gi|74754346|sp|O43719.1|HTSF1_HUMAN (RecName: Full=HIV Tat-specific factor 1; Short=Tat-SF1) HSP 1 Score: 53.9138 bits (128), Expect = 1.825e-7 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0 Query: 178 YEWDREKNAWFPRIDEDFMAQYQLNYGFTPD 208 YEWD +K AWFP+I EDF+A YQ NYGF+ D Sbjct: 50 YEWDLDKKAWFPKITEDFIATYQANYGFSND 80
BLAST of hiv tat-specific factor 1-like protein vs. SwissProt
Match: gi|75070769|sp|Q5RB63.1|HTSF1_PONAB (RecName: Full=HIV Tat-specific factor 1 homolog) HSP 1 Score: 53.9138 bits (128), Expect = 1.930e-7 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0 Query: 178 YEWDREKNAWFPRIDEDFMAQYQLNYGFTPD 208 YEWD +K AWFP+I EDF+A YQ NYGF+ D Sbjct: 50 YEWDLDKKAWFPKITEDFIATYQANYGFSND 80
BLAST of hiv tat-specific factor 1-like protein vs. nr
Match: gi|225714366|gb|ACO13029.1| (HIV Tat-specific factor 1 homolog [Lepeophtheirus salmonis]) HSP 1 Score: 128.642 bits (322), Expect = 2.251e-31 Identity = 70/169 (41.42%), Postives = 92/169 (54.44%), Query Frame = 0 Query: 41 FTDPHTQAVYVLNPAGTDWLPLAEADQAPPPASQPSDPAQPSPYRFDGQTYTHR-RADGQRFKWDLVEQSWAEDNSGQSSEESELDSGDEAPRLTEAEQKERAYRQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGFTPD 208 +TDP T+ YVLN + TDW+P E D Y FDG+TY HR + G++ +W+L + W + ESELDS E + ++A PGW N LKD +TG + Y+D DG YEWD +KNAWFP++D +FMA YQLNYGFT D Sbjct: 35 YTDPWTKKEYVLNSSKTDWVPREETD-----------------YEFDGKTYIHRDKKTGRKRRWNLDSKEW-------ETSESELDSDSENEKPI----------VKKAMPGWNPDKNILKDSDTGVQTYKDPVDGTTYEWDSDKNAWFPKMDSEFMAVYQLNYGFTSD 169
BLAST of hiv tat-specific factor 1-like protein vs. nr
Match: gi|1325309133|ref|XP_023336189.1| (HIV Tat-specific factor 1-like [Eurytemora affinis]) HSP 1 Score: 114.005 bits (284), Expect = 1.152e-25 Identity = 73/170 (42.94%), Postives = 93/170 (54.71%), Query Frame = 0 Query: 39 TRFTDPHTQAVYVLNPAGTDWLPLAEADQAPPPASQPSDPAQPSPYRFDGQTYTHRRADGQRFKWDLVEQSWAEDNSGQSSEESELDSGDEAPRLTEAEQKERAYRQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGFTPD 208 T +TD T Y + W + A PP Q + Y DG TY +R + G + KW+ W + Q S+ESE E TE E+K R YR+R+A PGW K Y KDPETG +Y+D QDG+ YEWD +K AWFP++ E+FMA YQLNYGFT D Sbjct: 108 TFYTDAQTHVRYKWDKDENCW-KTEDGGAALPPGPQ----VNSADYELDGDTYVYRDSSGVKHKWNKDANQW---DKQQDSDESE-----EDDNTTEEERKARQYRKRKAAPGWEAK-KYEKDPETGKTVYKDPQDGLTYEWDEDKKAWFPQLGEEFMAAYQLNYGFTND 263
BLAST of hiv tat-specific factor 1-like protein vs. nr
Match: gi|1228009931|ref|XP_021936890.1| (HIV Tat-specific factor 1 homolog isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 87.8113 bits (216), Expect = 1.316e-16 Identity = 63/225 (28.00%), Postives = 100/225 (44.44%), Query Frame = 0 Query: 14 AGASPPSAADEVPPREAYSTDAACRTRFTDPHTQAVYVLNPAGTDWLPLAEA-------------DQAPPPASQPS----------------DPAQPSPYRFDGQTYTHRR-ADGQRFKWDLVEQSWA--EDNSGQSSEESELDSGDEAPRLTEAEQKERAYRQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGFT 206 A PS DE+ + ++ C +T+P T+ Y+ + +W+ + D P ++ D + Y FDG++Y ++ G +K+D +QSW +D+ G +EE ++SGD +Q + +G Y D T Y DA DG +Y WDRE+NAWFP++D+DF+A YQ+NYGFT Sbjct: 55 TNAISPSKRDEIDNSNLHYEESVCV--YTNPVTKDQYIWDSNKHEWVVRSHGIVPSGEGSLEKCEDHVLKPETEVQNTNPESVGLLHCPPYYDKISSNDYEFDGESYCYKDPKTGVTYKFDNSKQSWVVKDDDCGACNEEC-VESGDSV------------IKQDMSSGTYG----YEGDTHT----YTDATDGTVYIWDRERNAWFPKVDDDFLALYQMNYGFT 256
BLAST of hiv tat-specific factor 1-like protein vs. nr
Match: gi|1228009939|ref|XP_021936894.1| (HIV Tat-specific factor 1 homolog isoform X3 [Zootermopsis nevadensis]) HSP 1 Score: 87.8113 bits (216), Expect = 1.320e-16 Identity = 63/225 (28.00%), Postives = 100/225 (44.44%), Query Frame = 0 Query: 14 AGASPPSAADEVPPREAYSTDAACRTRFTDPHTQAVYVLNPAGTDWLPLAEA-------------DQAPPPASQPS----------------DPAQPSPYRFDGQTYTHRR-ADGQRFKWDLVEQSWA--EDNSGQSSEESELDSGDEAPRLTEAEQKERAYRQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGFT 206 A PS DE+ + ++ C +T+P T+ Y+ + +W+ + D P ++ D + Y FDG++Y ++ G +K+D +QSW +D+ G +EE ++SGD +Q + +G Y D T Y DA DG +Y WDRE+NAWFP++D+DF+A YQ+NYGFT Sbjct: 47 TNAISPSKRDEIDNSNLHYEESVCV--YTNPVTKDQYIWDSNKHEWVVRSHGIVPSGEGSLEKCEDHVLKPETEVQNTNPESVGLLHCPPYYDKISSNDYEFDGESYCYKDPKTGVTYKFDNSKQSWVVKDDDCGACNEEC-VESGDSV------------IKQDMSSGTYG----YEGDTHT----YTDATDGTVYIWDRERNAWFPKVDDDFLALYQMNYGFT 248
BLAST of hiv tat-specific factor 1-like protein vs. nr
Match: gi|225710668|gb|ACO11180.1| (HIV Tat-specific factor 1 homolog [Caligus rogercresseyi]) HSP 1 Score: 87.0409 bits (214), Expect = 1.343e-16 Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 144 RQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGFTPD 208 + ++ PGW +N KD E+G + Y D DG LYEWD K AWFP+ID DFMA YQLNYGFT D Sbjct: 12 KIKKGMPGWNPSANISKDSESGTQTYTDPSDGTLYEWDASKKAWFPKIDTDFMAVYQLNYGFTSD 76
BLAST of hiv tat-specific factor 1-like protein vs. nr
Match: gi|1228009933|ref|XP_021936891.1| (HIV Tat-specific factor 1 homolog isoform X2 [Zootermopsis nevadensis] >gi|1228009935|ref|XP_021936892.1| HIV Tat-specific factor 1 homolog isoform X2 [Zootermopsis nevadensis] >gi|1228009937|ref|XP_021936893.1| HIV Tat-specific factor 1 homolog isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 87.8113 bits (216), Expect = 1.439e-16 Identity = 63/225 (28.00%), Postives = 100/225 (44.44%), Query Frame = 0 Query: 14 AGASPPSAADEVPPREAYSTDAACRTRFTDPHTQAVYVLNPAGTDWLPLAEA-------------DQAPPPASQPS----------------DPAQPSPYRFDGQTYTHRR-ADGQRFKWDLVEQSWA--EDNSGQSSEESELDSGDEAPRLTEAEQKERAYRQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGFT 206 A PS DE+ + ++ C +T+P T+ Y+ + +W+ + D P ++ D + Y FDG++Y ++ G +K+D +QSW +D+ G +EE ++SGD +Q + +G Y D T Y DA DG +Y WDRE+NAWFP++D+DF+A YQ+NYGFT Sbjct: 47 TNAISPSKRDEIDNSNLHYEESVCV--YTNPVTKDQYIWDSNKHEWVVRSHGIVPSGEGSLEKCEDHVLKPETEVQNTNPESVGLLHCPPYYDKISSNDYEFDGESYCYKDPKTGVTYKFDNSKQSWVVKDDDCGACNEEC-VESGDSV------------IKQDMSSGTYG----YEGDTHT----YTDATDGTVYIWDRERNAWFPKVDDDFLALYQMNYGFT 248
BLAST of hiv tat-specific factor 1-like protein vs. nr
Match: gi|646699606|gb|KDR10150.1| (HIV Tat-specific factor 1-like protein [Zootermopsis nevadensis]) HSP 1 Score: 87.8113 bits (216), Expect = 1.444e-16 Identity = 63/225 (28.00%), Postives = 100/225 (44.44%), Query Frame = 0 Query: 14 AGASPPSAADEVPPREAYSTDAACRTRFTDPHTQAVYVLNPAGTDWLPLAEA-------------DQAPPPASQPS----------------DPAQPSPYRFDGQTYTHRR-ADGQRFKWDLVEQSWA--EDNSGQSSEESELDSGDEAPRLTEAEQKERAYRQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGFT 206 A PS DE+ + ++ C +T+P T+ Y+ + +W+ + D P ++ D + Y FDG++Y ++ G +K+D +QSW +D+ G +EE ++SGD +Q + +G Y D T Y DA DG +Y WDRE+NAWFP++D+DF+A YQ+NYGFT Sbjct: 47 TNAISPSKRDEIDNSNLHYEESVCV--YTNPVTKDQYIWDSNKHEWVVRSHGIVPSGEGSLEKCEDHVLKPETEVQNTNPESVGLLHCPPYYDKISSNDYEFDGESYCYKDPKTGVTYKFDNSKQSWVVKDDDCGACNEEC-VESGDSV------------IKQDMSSGTYG----YEGDTHT----YTDATDGTVYIWDRERNAWFPKVDDDFLALYQMNYGFT 248
BLAST of hiv tat-specific factor 1-like protein vs. nr
Match: gi|759047730|ref|XP_011332895.1| (PREDICTED: HIV Tat-specific factor 1 homolog [Ooceraea biroi] >gi|607363830|gb|EZA58058.1| HIV Tat-specific factor 1-like protein [Ooceraea biroi]) HSP 1 Score: 85.1149 bits (209), Expect = 1.123e-15 Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 0 Query: 84 YRFDGQTYTHR-RADGQRFKWDLVEQSWAE---DNSGQSSEES--ELDSGDEAPRLTEAEQKERAYRQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGFT 206 Y FDGQTY + +A +++D W E DN G ++ES E + G+ P++ E + A+ G+ E Y D DG +Y WD+EKNAWFP++DEDFMA+YQ++YGFT Sbjct: 24 YEFDGQTYIYTDKATNITYRFDQKNNKWVEKKDDNCGSDNKESLDESEKGNTVPQVCEKRTETGAF-------GF----------ENDTHTYTDPNDGSVYFWDKEKNAWFPKVDEDFMAKYQMSYGFT 135
BLAST of hiv tat-specific factor 1-like protein vs. nr
Match: gi|939692751|ref|XP_014290410.1| (PREDICTED: HIV Tat-specific factor 1 homolog [Halyomorpha halys]) HSP 1 Score: 84.3445 bits (207), Expect = 2.229e-15 Identity = 43/124 (34.68%), Postives = 71/124 (57.26%), Query Frame = 0 Query: 84 YRFDGQTYTHR-RADGQRFKWDLVEQSWAEDNSGQSSEESELDSGDEAPRLTEAEQKERAYRQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGFT 206 Y FDG+TY + + ++WD + W + N G + +S++ S + + ++++ RQ ++ +G N L Y D DG +Y WD+EKNAWFP++DEDF+A+YQL+YGF+ Sbjct: 71 YVFDGETYVYTDKKTNASYRWDKNDNKWVQ-NEGITLTKSKIKSNENDEEVDTDDEEKEVIRQDMSKGTYGTDGNTL--------TYTDPNDGSVYVWDKEKNAWFPKVDEDFLARYQLSYGFS 185
BLAST of hiv tat-specific factor 1-like protein vs. nr
Match: gi|307199125|gb|EFN79835.1| (HIV Tat-specific factor 1-like protein [Harpegnathos saltator]) HSP 1 Score: 81.6481 bits (200), Expect = 2.232e-15 Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = 0 Query: 84 YRFDGQTYTHR-RADGQRFKWDLVEQSWAEDNSGQSSEESELDSGDEAPRLTEAEQKERAYRQRRAQPGWGQKSNYLKDPETGAELYRDAQDGMLYEWDREKNAWFPRIDEDFMAQYQLNYGF 205 Y FDGQTY + +A +K+D W + + +++ SG E E+KE A + + +G E Y D DG +Y WD+EKNAWFP++DEDFMA+YQ++YGF Sbjct: 17 YEFDGQTYIYTDKATNITYKFDQENNKWMIKKDNEKNSDNKESSG-------ETEKKENASSEVNSSGIFG--------FENDTHTYTDPNDGSMYIWDKEKNAWFPKVDEDFMAKYQMSYGF 124 The following BLAST results are available for this feature:
BLAST of hiv tat-specific factor 1-like protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of hiv tat-specific factor 1-like protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 3
BLAST of hiv tat-specific factor 1-like protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold270_size230592:204713..207899+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold270_size230592-snap-gene-1.22 ID=maker-scaffold270_size230592-snap-gene-1.22|Name=hiv tat-specific factor 1-like protein|organism=Tigriopus kingsejongensis|type=gene|length=3187bp|location=Sequence derived from alignment at scaffold270_size230592:204713..207899+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hiv tat-specific factor 1-like protein' has the following synonyms
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