cuticle protein, maker-scaffold2768_size12490-snap-gene-0.3 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000001415 (supercontig:LSalAtl2s:LSalAtl2s1241:84693:85124:1 gene:EMLSAG00000001415 transcript:EMLSAT00000001415 description:"augustus-LSalAtl2s1241-processed-gene-0.12") HSP 1 Score: 108.612 bits (270), Expect = 7.293e-32 Identity = 65/111 (58.56%), Postives = 78/111 (70.27%), Query Frame = 0 Query: 19 IFALLALAAVFLADNPHP-PYRPAPA----PYQPEPKY-EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGCVADVQYAGEAKYE 122 + ALLA+A AD P PY PAPA PY P P Y E+PA YQY YAV DEY+ L+F A+E R+GY+T+G Y V LPDGR QTV+Y+V + SG VADV Y+GEAKYE Sbjct: 3 LSALLAVAMSAPADTYRPAPYHPAPAYKPAPYHPAPSYKEDPAIYQYQYAVSDEYAGLNFGADEARDGYSTNGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEAKYE 113
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000001414 (supercontig:LSalAtl2s:LSalAtl2s1241:78790:79435:1 gene:EMLSAG00000001414 transcript:EMLSAT00000001414 description:"augustus-LSalAtl2s1241-processed-gene-0.11") HSP 1 Score: 101.679 bits (252), Expect = 5.631e-29 Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 0 Query: 42 PAPYQPEPKY-EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGCVADVQYAGEAKYE 122 PAPY P P Y E+PA YQY YAV DEY+ L+F A+E R+GY+T G Y V LPDGR QTV+Y+V + SG VADV Y+GEAKYE Sbjct: 42 PAPYHPAPSYKEDPAVYQYQYAVSDEYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEAKYE 124
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000009893 (supercontig:LSalAtl2s:LSalAtl2s643:512403:512841:-1 gene:EMLSAG00000009893 transcript:EMLSAT00000009893 description:"augustus-LSalAtl2s643-processed-gene-4.10") HSP 1 Score: 96.6709 bits (239), Expect = 2.881e-27 Identity = 59/107 (55.14%), Postives = 72/107 (67.29%), Query Frame = 0 Query: 16 MKTIFALLALAAVFLADNPHPPYRPAPAPYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGCVADVQYAGEAKY 121 MKT A+ AL A+ +AD+P P + + E PA YQY YAVKD+YS ++F A+E R+GYAT GSY V LPDGR QTVTYSV + SG VADV Y+GE KY Sbjct: 1 MKTFIAVSALLALAIADHPAPYHPAPAPYHPAPSYNEVPAAYQYQYAVKDDYSGVNFGADEARDGYATKGSYTVALPDGRLQTVTYSVTDAYSGYVADVXYSGEPKY 107
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000009892 (supercontig:LSalAtl2s:LSalAtl2s643:493611:494175:1 gene:EMLSAG00000009892 transcript:EMLSAT00000009892 description:"augustus-LSalAtl2s643-processed-gene-4.8") HSP 1 Score: 93.5893 bits (231), Expect = 3.799e-26 Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 0 Query: 16 MKTIFALLALAAVFLADNPHPPYRPAPAPYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGCVADVQYAGE 118 MKT A+ AL A+ +AD+P P + + E PA YQY YAVKD+YS ++F A+E R+GYAT GSY V LPDGR QTVTYSV + SG VADV +GE Sbjct: 1 MKTFIAVSALLALAIADHPAPYHPAPAPYHPAPSYNEVPAAYQYQYAVKDDYSGVNFGADEARDGYATKGSYTVALPDGRLQTVTYSVTDAYSGYVADVXXSGE 104
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000012059 (supercontig:LSalAtl2s:LSalAtl2s85:1250196:1251194:1 gene:EMLSAG00000012059 transcript:EMLSAT00000012059 description:"snap-LSalAtl2s85-processed-gene-11.56") HSP 1 Score: 90.5077 bits (223), Expect = 1.732e-24 Identity = 57/118 (48.31%), Postives = 73/118 (61.86%), Query Frame = 0 Query: 16 MKTIFALLALAAVFLADN-PHP---PYRP-------APAPYQPEPKYEEPAQ-YQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGCVADVQYAGEAKY 121 K + A + LA+V+ + PHP PY P APAP PKYEEPAQ Y + Y V D+YS +F+A E +G T+GSY+V LPDGR QTV+Y+V+ +G VADVQY G Y Sbjct: 2 FKLLVASVLLASVYGDHSAPHPSPAPYHPPQPAPYHAPAPSYHSPKYEEPAQPYAFQYGVADDYSGSNFSAEENADGKITTGSYKVALPDGRIQTVSYTVDAYNGFVADVQYEGTPVY 119
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000004844 (supercontig:LSalAtl2s:LSalAtl2s2560:13440:35521:-1 gene:EMLSAG00000004844 transcript:EMLSAT00000004844 description:"augustus-LSalAtl2s2560-processed-gene-0.2") HSP 1 Score: 90.8929 bits (224), Expect = 5.915e-24 Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 0 Query: 37 PYRPAP---APYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGCVADVQYAGEAKYE 122 PY PAP +PY E Y+ PA YQY YAV D+Y+ +F NE R+GY+T+G Y+V LPDGRTQ V Y+V + SG VADV+Y G+A Y+ Sbjct: 131 PYHPAPTHKSPYHAE-SYDTPAVYQYGYAVADDYAGTNFAQNENRDGYSTAGEYRVGLPDGRTQIVNYNVADAYSGYVADVKYEGQAHYD 219
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000009894 (supercontig:LSalAtl2s:LSalAtl2s643:527852:528501:1 gene:EMLSAG00000009894 transcript:EMLSAT00000009894 description:"augustus-LSalAtl2s643-processed-gene-4.12") HSP 1 Score: 88.5817 bits (218), Expect = 1.045e-23 Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 0 Query: 52 EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGCVADVQYAGE 118 E PA YQY YAVKD+YS ++F A+E R+GYAT GSY V LPDGR QTVTYSV + SG VADV Y+GE Sbjct: 83 EVPAAYQYQYAVKDDYSGVNFGADETRDGYATKGSYTVALPDGRLQTVTYSVTDAYSGYVADVTYSGE 150
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000009004 (supercontig:LSalAtl2s:LSalAtl2s5650:4067:4550:1 gene:EMLSAG00000009004 transcript:EMLSAT00000009004 description:"snap-LSalAtl2s5650-processed-gene-0.3") HSP 1 Score: 86.2705 bits (212), Expect = 2.779e-23 Identity = 56/120 (46.67%), Postives = 68/120 (56.67%), Query Frame = 0 Query: 16 MKTIFALLALAAVFLADNPHPPYRPAPAPY------------QPEPKY-EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGCVADVQYAGEAKY 121 MK+ AL AL A+ AD+P P P P Y E+P YQY YAV DEY L+F A+E R+GY+T G V LPDGR QTV+Y+V + SG VADV Y+GE KY Sbjct: 1 MKSFIALSALLAIAFADHPAPAPYHPAPAPYXPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYXGLNFEADEARDGYSTQGKXSVALPDGRIQTVSYNVADAYSGYVADVTYSGEPKY 120
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000005113 (supercontig:LSalAtl2s:LSalAtl2s26:142964:143594:1 gene:EMLSAG00000005113 transcript:EMLSAT00000005113 description:"augustus-LSalAtl2s26-processed-gene-1.2") HSP 1 Score: 86.2705 bits (212), Expect = 3.958e-23 Identity = 51/108 (47.22%), Postives = 60/108 (55.56%), Query Frame = 0 Query: 16 MKTIFALLALAAVFLADNPHPPYRPAPAPYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGD--SGCVADVQYAGEAKY 121 MK + A AL A+ A Y P P YE+PA Y Y Y V D+YS +F +E R+GY TSG Y V LPDGR QTV Y V GD +G VADV Y+G Y Sbjct: 1 MKILLAFSALIALTSAQG-----------YHPTPSYEQPAHYAYNYGVVDDYSGNNFGQSESRDGYVTSGEYHVQLPDGRLQTVNYHV-GDAYTGYVADVTYSGTPSY 96
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000008499 (supercontig:LSalAtl2s:LSalAtl2s524:110868:111424:-1 gene:EMLSAG00000008499 transcript:EMLSAT00000008499 description:"maker-LSalAtl2s524-augustus-gene-1.42") HSP 1 Score: 85.1149 bits (209), Expect = 1.413e-22 Identity = 52/115 (45.22%), Postives = 67/115 (58.26%), Query Frame = 0 Query: 16 MKTIFALLALAAVFLADNPHPP----YRPAPAPYQPEPKYEEPAQ----YQYAYAVKDEYSQLDFNANEEREGYAT-SGSYQVLLPDGRTQTVTYSVNGDSGCVADVQYAGEAKY 121 M + L L A AD P+ P Y+ AP YQP Y++P + Y Y VKD+Y+ FN NEE++ Y GSY V LPDGR QTVTY + ++G VADV+Y GEA+Y Sbjct: 1 MFKLIVLSVLIAAAFADQPYAPPPPVYKQAPV-YQPAKGYKDPELPPQPFAYQYGVKDDYTGAAFNKNEEQDSYGNLQGSYSVNLPDGRVQTVTYHADAENGFVADVKYEGEAQY 114
BLAST of cuticle protein vs. SwissProt
Match: gi|75026432|sp|Q9V7U0.1|RESIL_DROME (RecName: Full=Pro-resilin; Flags: Precursor) HSP 1 Score: 56.225 bits (134), Expect = 3.183e-9 Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 0 Query: 52 EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGCVADVQYAGEAK 120 +EPA+Y++ Y V+D S L F +E R+G T+G Y VLLPDGR Q V Y + G ++Y G+A Sbjct: 340 DEPAKYEFNYQVEDAPSGLSFGHSEMRDGDFTTGQYNVLLPDGRKQIVEYEAD-QQGYRPQIRYEGDAN 407
BLAST of cuticle protein vs. nr
Match: gi|155966288|gb|ABU41097.1| (putative cuticle protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 100.138 bits (248), Expect = 3.900e-24 Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0 Query: 42 PAPYQPEPKY-EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGCVADVQYAGEAKYE 122 PAPY P P Y E+PA YQY YAV DEY+ L+F A+E R+GY+T G Y V LPDGR QTV Y+V + SG VADV Y+GEAKYE Sbjct: 41 PAPYHPAPSYKEDPAVYQYQYAVSDEYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVAYNVADAYSGYVADVTYSGEAKYE 123
BLAST of cuticle protein vs. nr
Match: gi|155966279|gb|ABU41093.1| (BCS-1 protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 98.5969 bits (244), Expect = 5.434e-24 Identity = 55/88 (62.50%), Postives = 62/88 (70.45%), Query Frame = 0 Query: 37 PYRPAPAPYQPEPKY-EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGCVADVQYAGEAKYE 122 PY PA APY P Y EEPA YQY YAV DEY+ L+F A+E R+GY+T G Y V LPDGR QTV Y V + SG VADV Y+GE KYE Sbjct: 11 PYPPALAPYHAAPSYKEEPAAYQYQYAVSDEYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVNYDVADAYSGYVADVTYSGEPKYE 98
BLAST of cuticle protein vs. nr
Match: gi|1325286541|ref|XP_023327997.1| (cuticle protein 7-like [Eurytemora affinis]) HSP 1 Score: 98.2117 bits (243), Expect = 2.799e-23 Identity = 58/118 (49.15%), Postives = 73/118 (61.86%), Query Frame = 0 Query: 10 ITTTSNMKTIFALLALAAVFLADNPHPPYRPAPAPYQP-----EPKY-EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGCVADVQYAGEAKY 121 T + NMK A+ +L A+ A APAP P P+Y +EPA+Y + +AVKD+Y+ ++ E REGYATSGSY V LPDGR Q VTYSVNGD G VA+V Y G A+Y Sbjct: 9 FTQSYNMKVFLAVSSLLAISAA---------APAPDTPGYAPAAPQYADEPAKYAFNWAVKDDYTNNNYGQEETREGYATSGSYYVALPDGRLQKVTYSVNGDGGYVAEVSYEGTAQY 117
BLAST of cuticle protein vs. nr
Match: gi|1325267609|ref|XP_023342074.1| (cuticle protein 7-like [Eurytemora affinis]) HSP 1 Score: 97.4413 bits (241), Expect = 9.478e-23 Identity = 59/109 (54.13%), Postives = 67/109 (61.47%), Query Frame = 0 Query: 16 MKTIFALLALAAVFLADNPHPPYRPAPAP-YQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGCVADVQYAGEAKYE 122 M F + AL A+ ADN AP Y EP Y+EPA Y Y YAV D+YS FNA E R+GY+TSGSY V LPDGR QTV Y V + SG VADV Y+GEA Y Sbjct: 1 MFKCFVVTALFALTAADN---------APRYGAEPSYDEPAVYSYNYAVADDYSGSRFNAGESRDGYSTSGSYSVNLPDGRIQTVNYKVADAYSGYVADVTYSGEASYS 100
BLAST of cuticle protein vs. nr
Match: gi|1214785061|gb|ASK05861.1| (chitin-binding protein [Macrobrachium nipponense]) HSP 1 Score: 94.3597 bits (233), Expect = 1.506e-22 Identity = 55/104 (52.88%), Postives = 64/104 (61.54%), Query Frame = 0 Query: 18 TIFALLALAAVFLADNPHPPYRPAPAPYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGCVADVQYAGEAKY 121 T+ LLA+ AV AD + PAP+ + P P PAQY + YAVKD+YS DF E R GY T GSY V LPDGR Q V Y V GDSG +A V Y GEA+Y Sbjct: 4 TVIVLLAVMAVASADPVTSYHAPAPSYHAPAPA--GPAQYNFNYAVKDDYSGNDFGHEEGRNGYDTQGSYYVQLPDGRLQKVDYVVKGDSGYLAQVNYQGEAQY 105
BLAST of cuticle protein vs. nr
Match: gi|225713136|gb|ACO12414.1| (Cuticle protein 7 [Lepeophtheirus salmonis]) HSP 1 Score: 90.8929 bits (224), Expect = 7.327e-21 Identity = 55/113 (48.67%), Postives = 67/113 (59.29%), Query Frame = 0 Query: 16 MKTIFALLALAAVFLADNPHPPYRPAPAPYQ-PEPKY------EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGCVADVQYAGEAKY 121 + + A + LA+V L D+ H P+ PA APY P P Y E P Y + Y V D+YS F A E +G TSGSYQV LPDGR QTVTY+V+G +G VADV Y G Y Sbjct: 2 FRFMIASILLASV-LGDH-HAPHHPALAPYHAPSPSYKPTRYDESPQPYAFKYGVSDDYSGAQFTAEENADGKITSGSYQVALPDGRIQTVTYTVDGYNGFVADVTYEGTPSY 112
BLAST of cuticle protein vs. nr
Match: gi|290462725|gb|ADD24410.1| (Cuticle protein 18.6, isoform B [Lepeophtheirus salmonis]) HSP 1 Score: 88.1965 bits (217), Expect = 8.128e-20 Identity = 57/117 (48.72%), Postives = 73/117 (62.39%), Query Frame = 0 Query: 17 KTIFALLALAAVFLADN-PHP---PYRP-APAPYQP------EPKYEEPAQ-YQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGCVADVQYAGEAKY 121 K + A + LA+V+ + PHP PY P PAPY PKYEEPA+ Y + Y V D+YS +F+A E +G TSGSY+V LPDGR QTV+Y+V+ +G VADVQY G Y Sbjct: 3 KLLVASVLLASVYGDHSAPHPSPAPYHPPQPAPYHTPASSYHSPKYEEPAKPYAFQYGVADDYSGSNFSAEENADGKITSGSYKVALPDGRIQTVSYTVDAYNGFVADVQYEGTPVY 119
BLAST of cuticle protein vs. nr
Match: gi|1022757890|gb|KZS04483.1| (putative Cuticular protein [Daphnia magna]) HSP 1 Score: 87.0409 bits (214), Expect = 1.081e-19 Identity = 55/110 (50.00%), Postives = 64/110 (58.18%), Query Frame = 0 Query: 16 MKTIFALLALAAVFLADNPHPPYRP--APAPYQPEPKYEEPA--QYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGCVADVQYAGEAKY 121 MK I L L AV + PPY+P + Y + Y PA Y Y Y VKD Y+ +F E R+G T G YQVLLPDGR Q VTY VNG SG VADV+Y G+AKY Sbjct: 1 MKVII-LSTLIAVVIGT---PPYQPNNGYSSYNYDVNYYAPAYPAYNYGYHVKDPYTYSEFGHEETRKGDNTKGQYQVLLPDGRRQVVTYYVNGKSGFVADVKYIGDAKY 106
BLAST of cuticle protein vs. nr
Match: gi|1022773440|gb|KZS17536.1| (Cuticular protein [Daphnia magna]) HSP 1 Score: 86.6557 bits (213), Expect = 2.261e-19 Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 0 Query: 15 NMKTIFALLALAAVFLADNPHPPYRPAPAPYQPEPKYEE---PAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGCVADVQYAGEAKY 121 ++ I A L++A V +A P Y A +P YE+ P + +A+AVKDE S+ D++ +E +G T+GSY+V+LPDGRTQ VTY + ++G VADV+Y GEA+Y Sbjct: 2 QVQIIVAFLSMAVVLIAGQEQPQYASGVA----KPSYEQQQAPMPHSFAWAVKDEPSKNDYSHQQESDGKVTTGSYRVVLPDGRTQIVTYKAD-ENGYVADVKYEGEARY 106
BLAST of cuticle protein vs. nr
Match: gi|1325286982|ref|XP_023328231.1| (calphotin-like [Eurytemora affinis]) HSP 1 Score: 91.6633 bits (226), Expect = 4.327e-19 Identity = 53/100 (53.00%), Postives = 64/100 (64.00%), Query Frame = 0 Query: 22 LLALAAVFLADNPHPPYRPAPAPYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNG-DSGCVADVQYAGEAK 120 + +AA F+ PP R AP EPA Y Y+Y VKD+Y +DF A+E R+ TSGSYQVLLPDGR QTVTY+V+G DSG +ADV Y GE K Sbjct: 1 MRIVAAAFVFSLATPPSRGDTAPVY---GVSEPANYAYSYIVKDDYFGVDFKADESRQVDLTSGSYQVLLPDGRIQTVTYTVDGYDSGYIADVSYNGEPK 97 The following BLAST results are available for this feature:
BLAST of cuticle protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of cuticle protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of cuticle protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2768_size12490:10798..11248- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold2768_size12490-snap-gene-0.3 ID=maker-scaffold2768_size12490-snap-gene-0.3|Name=cuticle protein|organism=Tigriopus kingsejongensis|type=gene|length=451bp|location=Sequence derived from alignment at scaffold2768_size12490:10798..11248- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cuticle protein' has the following synonyms
Add to Basket
|