serum response factor, maker-scaffold280_size224562-snap-gene-1.17 (gene) Tigriopus kingsejongensis

Overview


Name	serum response factor
Unique Name	maker-scaffold280_size224562-snap-gene-1.17
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of serum response factor vs. L. salmonis genes
Match: EMLSAG00000002665 (supercontig:LSalAtl2s:LSalAtl2s153:855176:863745:1 gene:EMLSAG00000002665 transcript:EMLSAT00000002665 description:"maker-LSalAtl2s153-augustus-gene-8.12")

HSP 1 Score: 246.514 bits (628), Expect = 6.516e-80
Identity = 136/194 (70.10%), Postives = 152/194 (78.35%), Query Frame = 0

Query:   89 SSDEDS--DIKPP---------LGDRTAGTGRGKSTGPDPATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTS-VNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYNSHHAAAAAAHHHAYSPAS 270
            SSDED+  D+KPP               G G G  +G   + GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDP P G +   GDQRMSATGYEETEL YN+AA   +E+ QK RQMMY SH++ ++++ H+ +SP S
Sbjct:   99 SSDEDNIGDVKPPGLSSCSSSDTSSLRGGRGSGLKSGDSLSGGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPSPLGGAPTGGDQRMSATGYEETELXYNVAA---DEESQKXRQMMYXSHYSPSSSSGHNLFSPLS 289

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BLAST of serum response factor vs. L. salmonis genes
Match: EMLSAG00000000015 (supercontig:LSalAtl2s:LSalAtl2s1004:5890:19048:1 gene:EMLSAG00000000015 transcript:EMLSAT00000000015 description:"maker-LSalAtl2s1004-snap-gene-0.21")

HSP 1 Score: 56.6102 bits (135), Expect = 2.914e-9
Identity = 22/65 (33.85%), Postives = 41/65 (63.08%), Query Frame = 0

Query:  125 GRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI 189
            GR KI++  I ++  R  TF+KRK G+MKKAYELS L   ++ +++ +    ++ +A+  +  ++
Sbjct:    2 GRKKIQITRISDERNRQVTFTKRKFGLMKKAYELSVLCDCEISVIIFNSHNKLFQYASTDMDKVL 66

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BLAST of serum response factor vs. SwissProt
Match: gi|71153173|sp|Q24535.2|SRF_DROME (RecName: Full=Serum response factor homolog; Short=dSRF; AltName: Full=Protein blistered)

HSP 1 Score: 218.779 bits (556), Expect = 1.815e-66
Identity = 106/119 (89.08%), Postives = 110/119 (92.44%), Query Frame = 0

Query:  117 PATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIA 235
            PA GKKTKGRVKIKME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS+AGK LIQTCLNSPDP   G    GDQRMSATG+EETEL+YNIA
Sbjct:  158 PANGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVG---GGDQRMSATGFEETELSYNIA 273

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BLAST of serum response factor vs. SwissProt
Match: gi|2500872|sp|Q90718.1|SRF_CHICK (RecName: Full=Serum response factor; Short=SRF)

HSP 1 Score: 210.305 bits (534), Expect = 4.584e-64
Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 0

Query:  120 GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIA 235
            GKKT+GRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQV+LLVASETGHVYTFATRKLQPMITS+ GKALIQTCLNSPD  PP +    DQRMSATG+EET+LTY ++
Sbjct:    4 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDS-PPRSDPTTDQRMSATGFEETDLTYQVS 118

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BLAST of serum response factor vs. SwissProt
Match: gi|134877|sp|P23790.1|SRF_XENLA (RecName: Full=Serum response factor; Short=SRF)

HSP 1 Score: 209.534 bits (532), Expect = 5.330e-63
Identity = 102/126 (80.95%), Postives = 112/126 (88.89%), Query Frame = 0

Query:  110 GKSTGPDPATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIA 235
            G  +G  P  GKKT+GRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQV+LLVASETGHVYTFATRKLQPMITS+ GKALIQTCLNSPD  PP +  + DQRMSATG+EET+LTY ++
Sbjct:   84 GTVSGAKP--GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDS-PPRSDPSTDQRMSATGFEETDLTYQVS 206

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BLAST of serum response factor vs. SwissProt
Match: gi|134876|sp|P11831.1|SRF_HUMAN (RecName: Full=Serum response factor; Short=SRF)

HSP 1 Score: 209.92 bits (533), Expect = 1.750e-62
Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 0

Query:  120 GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIA 235
            GKKT+GRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQV+LLVASETGHVYTFATRKLQPMITS+ GKALIQTCLNSPD  PP +    DQRMSATG+EET+LTY ++
Sbjct:  137 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDS-PPRSDPTTDQRMSATGFEETDLTYQVS 251

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BLAST of serum response factor vs. SwissProt
Match: gi|81906791|sp|Q9JM73.1|SRF_MOUSE (RecName: Full=Serum response factor; Short=SRF)

HSP 1 Score: 207.223 bits (526), Expect = 1.929e-61
Identity = 98/116 (84.48%), Postives = 106/116 (91.38%), Query Frame = 0

Query:  120 GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIA 235
            GKKT+GRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQV+LLVASETGHVYTFATRKLQPMITS+ GKALIQTCLNSPD  PP +    DQRMSATG+EE +LTY ++
Sbjct:  133 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDS-PPRSDPTTDQRMSATGFEEPDLTYQVS 247

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BLAST of serum response factor vs. SwissProt
Match: gi|74897165|sp|Q54TY7.1|SRFA_DICDI (RecName: Full=Serum response factor homolog A; AltName: Full=DsSRF)

HSP 1 Score: 144.05 bits (362), Expect = 2.013e-38
Identity = 72/100 (72.00%), Postives = 81/100 (81.00%), Query Frame = 0

Query:  110 GKSTGPDPATGK---KTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPD 206
            G S    P+TG+   K  GR KIK+EFID+K RR+ TFSKRK GIMKKAYELSTLTGTQV+LLVASETGHVYTFAT KLQP+IT   GK LIQ+CLN+PD
Sbjct:   50 GTSEPSSPSTGECNGKKAGRRKIKIEFIDDKSRRHITFSKRKAGIMKKAYELSTLTGTQVLLLVASETGHVYTFATAKLQPLITRPEGKNLIQSCLNTPD 149

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BLAST of serum response factor vs. SwissProt
Match: gi|74897111|sp|Q54RY6.1|SRFB_DICDI (RecName: Full=Serum response factor homolog B)

HSP 1 Score: 138.272 bits (347), Expect = 7.112e-36
Identity = 66/90 (73.33%), Postives = 76/90 (84.44%), Query Frame = 0

Query:  121 KKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPP 210
            +K  GR KI +EFI +K RR+ TFSKRK+GIMKKAYELSTLTGTQV+L+VASETGHVYTFAT KLQP+IT   GK LIQ CLN+PD +PP
Sbjct:   33 EKKSGRRKINIEFIGDKSRRHITFSKRKSGIMKKAYELSTLTGTQVLLIVASETGHVYTFATPKLQPLITKQEGKTLIQACLNTPD-VPP 121

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BLAST of serum response factor vs. SwissProt
Match: gi|74656554|sp|Q5AFP3.1|MCM1_CANAL (RecName: Full=Transcription factor of morphogenesis MCM1)

HSP 1 Score: 126.716 bits (317), Expect = 2.614e-33
Identity = 59/87 (67.82%), Postives = 68/87 (78.16%), Query Frame = 0

Query:  120 GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPD 206
            GK  K R KI+++FI  K RR+ TFSKRK GIMKKAYELS LTGTQV+LLV SETG VYTF T KLQP++T   GK LIQ CLN+P+
Sbjct:   54 GKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVTKSEGKNLIQACLNAPE 140

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BLAST of serum response factor vs. SwissProt
Match: gi|126821|sp|P11746.2|MCM1_YEAST (RecName: Full=Pheromone receptor transcription factor; AltName: Full=GRM/PRTF protein)

HSP 1 Score: 124.02 bits (310), Expect = 5.236e-32
Identity = 55/89 (61.80%), Postives = 69/89 (77.53%), Query Frame = 0

Query:  117 PATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSP 205
            P    + K R KI+++FI+NK RR+ TFSKRK GIMKKA+ELS LTGTQV+LLV SETG VYTF+T K +P++T   G+ LIQ CLN+P
Sbjct:    9 PTNNGQQKERRKIEIKFIENKTRRHVTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGLVYTFSTPKFEPIVTQQEGRNLIQACLNAP 97

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BLAST of serum response factor vs. SwissProt
Match: gi|1168490|sp|P07249.2|ARGR1_YEAST (RecName: Full=Arginine metabolism regulation protein I; AltName: Full=Arginine-requiring protein 80)

HSP 1 Score: 102.064 bits (253), Expect = 6.888e-25
Identity = 45/84 (53.57%), Postives = 62/84 (73.81%), Query Frame = 0

Query:  123 TKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPD 206
            T  R K  + +I+NK RR+ TFSKR+ GIMKKAYELS LTG  ++LL+ + +G VYTF T KL+P++  D GK+LI+ C+N+ D
Sbjct:   77 TVTRRKQPIRYIENKTRRHVTFSKRRHGIMKKAYELSVLTGANILLLILANSGLVYTFTTPKLEPVVREDEGKSLIRACINASD 160

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BLAST of serum response factor vs. nr
Match: gi|1325335278|ref|XP_023349466.1| (myocyte-specific enhancer factor 2-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 279.641 bits (714), Expect = 6.274e-89
Identity = 172/288 (59.72%), Postives = 193/288 (67.01%), Query Frame = 0

Query:   44 DPHLHYGLPPASLPQSHVGGSALKRNADSAGLDMMGGTPSSAGGVSSDEDS-DIKPPLGDR----TAGTGRGKSTGPDPATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYNSHHAAAAAAHHHAYSPASSAAAAALFTPHSSATGLNSMSGHSPYGSHPGPSPSPASSAYGGGMSLSPGPTSHHS 326
            DPHL YGLPP       VG   +KR+ D+  +DMM G  SS      DEDS D KP +       T G GRGK     P  GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSD GKALIQTCLNSPDP PP  + + DQRMSATGYEETELTYN+    +E++QQKVRQMMY+SH++    + H+ +SP+ S    +    HS  T   + S    +    G S SP  S        SPGP  HHS
Sbjct:   82 DPHLQYGLPPM------VGN--MKRSVDAGQMDMMDGQDSS------DEDSQDTKPMIHPHDEYPTGGAGRGKPAPSTPLQGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDTGKALIQTCLNSPDP-PPIPASSADQRMSATGYEETELTYNV----NEDEQQKVRQMMYSSHYSHPQHS-HNLFSPSPSQYPVS----HSYITPHPAPSPSPSHHHPYGVSLSPTLSHSPTHHISSPGPPFHHS 345

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BLAST of serum response factor vs. nr
Match: gi|1325335276|ref|XP_023349465.1| (myocyte-specific enhancer factor 2-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 270.011 bits (689), Expect = 5.720e-85
Identity = 172/303 (56.77%), Postives = 193/303 (63.70%), Query Frame = 0

Query:   44 DPHLHYGLPPASLPQSHVGGSALKRNADSAGLDMMGGTPSSAGGVSSDEDS-DIKPPLGDR----TAGTGRGKSTGPDPATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALI---------------QTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYNSHHAAAAAAHHHAYSPASSAAAAALFTPHSSATGLNSMSGHSPYGSHPGPSPSPASSAYGGGMSLSPGPTSHHS 326
            DPHL YGLPP       VG   +KR+ D+  +DMM G  SS      DEDS D KP +       T G GRGK     P  GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSD GKALI               QTCLNSPDP PP  + + DQRMSATGYEETELTYN+    +E++QQKVRQMMY+SH++    + H+ +SP+ S    +    HS  T   + S    +    G S SP  S        SPGP  HHS
Sbjct:   82 DPHLQYGLPPM------VGN--MKRSVDAGQMDMMDGQDSS------DEDSQDTKPMIHPHDEYPTGGAGRGKPAPSTPLQGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDTGKALIQVCVQDNEYDMHTRVQTCLNSPDP-PPIPASSADQRMSATGYEETELTYNV----NEDEQQKVRQMMYSSHYSHPQHS-HNLFSPSPSQYPVS----HSYITPHPAPSPSPSHHHPYGVSLSPTLSHSPTHHISSPGPPFHHS 360

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BLAST of serum response factor vs. nr
Match: gi|6521960|emb|CAB62047.1| (Serum Response Factor [Artemia franciscana])

HSP 1 Score: 244.973 bits (624), Expect = 7.853e-76
Identity = 157/288 (54.51%), Postives = 180/288 (62.50%), Query Frame = 0

Query:   58 QSHVGGSALKRNADSAGLDMMGGTPSSAGGVSSDE-DSDIKPPLGDRTAGTGRGKSTGPD------------PATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYNSHHAAAAAAHHHAYSPASS-AAAAALFTPHSSATGLNSMSGHSPYGSHPGPSPSP---------ASSAYGGGMSLSPGPT 322
            Q HVG S L     S  L++  G   ++  V  +  + +++ PL     G   G S  PD            PA GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS+AGKALIQTCLNSPDP P G+   GDQRMSATG+EETELTYN+     ++  QKVRQMMY+ H   ++  HH    P  S     ++  PH     L  +S  S Y  H  P+ SP          SS  G  M+LSP PT
Sbjct:   38 QQHVGHSNL---GHSLNLNVHHGLKRTSENVKQEPLNMNLQDPLTGLDLGVSHG-SLSPDEDRSGPPSKKAPPANGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPDP-PNGS---GDQRMSATGFEETELTYNV-----QDDDQKVRQMMYSGHIPPSSTPHHLLSHPLQSPQYGGSMNHPHHGL--LPPVSNSSSYSMHGSPTSSPHPHHFVPHGLSSPSGSHMALSPAPT 310

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BLAST of serum response factor vs. nr
Match: gi|1330883023|gb|PNF18552.1| (hypothetical protein B7P43_G08491 [Cryptotermes secundus])

HSP 1 Score: 237.269 bits (604), Expect = 5.241e-73
Identity = 128/182 (70.33%), Postives = 143/182 (78.57%), Query Frame = 0

Query:   73 AGLDMMGGTPSSAGGVSSDEDSDIKPPLGDRTAGTGRGKSTGPDPATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYNSH 254
            AG+  +G   +S+      E SDI    GD +    + K+  P+   GKKTKGRVKIKME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS+AGKALIQTCLNSPDP P G  V GDQRMSATG+EETELTYNI    D+E  QKVRQ++Y+ H
Sbjct:   42 AGIQRVGVKRTSSDVCFDQEVSDI----GDDSFSQAQKKTPPPN---GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPDPPPSG--VGGDQRMSATGFEETELTYNI---GDDE--QKVRQLVYSPH 209

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BLAST of serum response factor vs. nr
Match: gi|939280263|ref|XP_014260738.1| (serum response factor homolog [Cimex lectularius])

HSP 1 Score: 236.498 bits (602), Expect = 1.362e-72
Identity = 117/139 (84.17%), Postives = 126/139 (90.65%), Query Frame = 0

Query:  114 GPDPATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYN 252
            G  P+ GKKTKGRVKIKME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS+AGKALIQTCLNSPDP P G+   GDQRMSATG+EETEL+YNI   ADEE  QKVRQ++Y+
Sbjct:  105 GSPPSNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPDPCPSGS--GGDQRMSATGFEETELSYNI---ADEE--QKVRQLVYS 236

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BLAST of serum response factor vs. nr
Match: gi|1227095778|gb|OXU20744.1| (hypothetical protein TSAR_000255 [Trichomalopsis sarcophagae])

HSP 1 Score: 236.113 bits (601), Expect = 8.491e-72
Identity = 120/151 (79.47%), Postives = 129/151 (85.43%), Query Frame = 0

Query:  107 TGRGKSTGPDPATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYNSHHAA 257
            T  G S    P+ GKKTKGRVKIKME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS+AGKALIQTCLNSPDP   G+S  GDQRMSATG+EETELTYNIA     + +QKVRQM+Y S H +
Sbjct:  128 TDLGISKKSPPSNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPDPPTSGSS--GDQRMSATGFEETELTYNIA-----DDEQKVRQMVYGSPHGS 271

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BLAST of serum response factor vs. nr
Match: gi|646712503|gb|KDR17235.1| (Serum response factor-like protein [Zootermopsis nevadensis])

HSP 1 Score: 235.343 bits (599), Expect = 1.029e-71
Identity = 130/194 (67.01%), Postives = 145/194 (74.74%), Query Frame = 0

Query:   65 ALKRNADSAGLDM-MGGTPSSA---GGVSSDEDSDIKPPLGDRTAGTGRGKSTGPDPATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYNSH 254
             +KR +     D  + G PS A   G   +D  SDI    GD +    + K+    P  GKKTKGRVKIKME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS+AGKALIQTCLNSPDP P G  V GDQRMSATG+EETELTYNI      + +QKVRQ++Y+ H
Sbjct:   66 GVKRTSSDVCFDQEVSGRPSMASQSGMGMTDCGSDI----GDDSFSQAQKKT---PPPNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPDPPPSG--VGGDQRMSATGFEETELTYNIG-----DDEQKVRQLVYSPH 245

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BLAST of serum response factor vs. nr
Match: gi|225543467|ref|NP_001139382.1| (serum response factor [Nasonia vitripennis])

HSP 1 Score: 235.728 bits (600), Expect = 1.054e-71
Identity = 120/151 (79.47%), Postives = 129/151 (85.43%), Query Frame = 0

Query:  107 TGRGKSTGPDPATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYNSHHAA 257
            T  G S    P+ GKKTKGRVKIKME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS+AGKALIQTCLNSPDP   G+S  GDQRMSATG+EETELTYNIA     + +QKVRQM+Y S H +
Sbjct:  128 TDLGISKKSPPSNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPDPPTSGSS--GDQRMSATGFEETELTYNIA-----DDEQKVRQMVYGSPHGS 271

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BLAST of serum response factor vs. nr
Match: gi|1241832597|gb|PBC28940.1| (Serum response factor [Apis cerana cerana])

HSP 1 Score: 233.802 bits (595), Expect = 1.534e-71
Identity = 115/142 (80.99%), Postives = 126/142 (88.73%), Query Frame = 0

Query:  117 PATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYNSHHAAA 258
            P+ GKKTKGRVKIKME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS+AGKALIQTCLNSPD  PP +  +GDQRMSATG+EETELTYNIA     + +QKVRQ++Y S H  +
Sbjct:   82 PSNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPD--PPASGSSGDQRMSATGFEETELTYNIA-----DDEQKVRQLVYGSPHGGS 216

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BLAST of serum response factor vs. nr
Match: gi|936714233|ref|XP_014235069.1| (serum response factor [Trichogramma pretiosum])

HSP 1 Score: 234.572 bits (597), Expect = 2.337e-71
Identity = 115/141 (81.56%), Postives = 128/141 (90.78%), Query Frame = 0

Query:  117 PATGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDAGKALIQTCLNSPDPMPPGTSVNGDQRMSATGYEETELTYNIAAAADEEQQQKVRQMMYNSHHAA 257
            P+ GKKTKGRVKIKME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS++GKALIQTCLNSPD  PP + V GDQRMSATG+EETEL+YNI   +DEE  QKVRQ++Y + H++
Sbjct:  128 PSNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSESGKALIQTCLNSPD--PPISGVTGDQRMSATGFEETELSYNI---SDEE--QKVRQLVYGTPHSS 261

The following BLAST results are available for this feature:

BLAST of serum response factor vs. L. salmonis genes
BLAST of serum response factor vs. SwissProt
BLAST of serum response factor vs. nr

BLAST of serum response factor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2


Match Name	E-value	Identity	Description
EMLSAG00000002665	6.516e-80	70.10	supercontig:LSalAtl2s:LSalAtl2s153:855176:863745:1...	[more]
EMLSAG00000000015	2.914e-9	33.85	supercontig:LSalAtl2s:LSalAtl2s1004:5890:19048:1 g...	[more]

BLAST of serum response factor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|71153173\|sp\|Q24535.2\|SRF_DROME	1.815e-66	89.08	RecName: Full=Serum response factor homolog; Short...	[more]
gi\|2500872\|sp\|Q90718.1\|SRF_CHICK	4.584e-64	85.34	RecName: Full=Serum response factor; Short=SRF	[more]
gi\|134877\|sp\|P23790.1\|SRF_XENLA	5.330e-63	80.95	RecName: Full=Serum response factor; Short=SRF	[more]
gi\|134876\|sp\|P11831.1\|SRF_HUMAN	1.750e-62	85.34	RecName: Full=Serum response factor; Short=SRF	[more]
gi\|81906791\|sp\|Q9JM73.1\|SRF_MOUSE	1.929e-61	84.48	RecName: Full=Serum response factor; Short=SRF	[more]
gi\|74897165\|sp\|Q54TY7.1\|SRFA_DICDI	2.013e-38	72.00	RecName: Full=Serum response factor homolog A; Alt...	[more]
gi\|74897111\|sp\|Q54RY6.1\|SRFB_DICDI	7.112e-36	73.33	RecName: Full=Serum response factor homolog B	[more]
gi\|74656554\|sp\|Q5AFP3.1\|MCM1_CANAL	2.614e-33	67.82	RecName: Full=Transcription factor of morphogenesi...	[more]
gi\|126821\|sp\|P11746.2\|MCM1_YEAST	5.236e-32	61.80	RecName: Full=Pheromone receptor transcription fac...	[more]
gi\|1168490\|sp\|P07249.2\|ARGR1_YEAST	6.888e-25	53.57	RecName: Full=Arginine metabolism regulation prote...	[more]

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BLAST of serum response factor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325335278\|ref\|XP_023349466.1\|	6.274e-89	59.72	myocyte-specific enhancer factor 2-like isoform X2...	[more]
gi\|1325335276\|ref\|XP_023349465.1\|	5.720e-85	56.77	myocyte-specific enhancer factor 2-like isoform X1...	[more]
gi\|6521960\|emb\|CAB62047.1\|	7.853e-76	54.51	Serum Response Factor [Artemia franciscana]	[more]
gi\|1330883023\|gb\|PNF18552.1\|	5.241e-73	70.33	hypothetical protein B7P43_G08491 [Cryptotermes se...	[more]
gi\|939280263\|ref\|XP_014260738.1\|	1.362e-72	84.17	serum response factor homolog [Cimex lectularius]	[more]
gi\|1227095778\|gb\|OXU20744.1\|	8.491e-72	79.47	hypothetical protein TSAR_000255 [Trichomalopsis s...	[more]
gi\|646712503\|gb\|KDR17235.1\|	1.029e-71	67.01	Serum response factor-like protein [Zootermopsis n...	[more]
gi\|225543467\|ref\|NP_001139382.1\|	1.054e-71	79.47	serum response factor [Nasonia vitripennis]	[more]
gi\|1241832597\|gb\|PBC28940.1\|	1.534e-71	80.99	Serum response factor [Apis cerana cerana]	[more]
gi\|936714233\|ref\|XP_014235069.1\|	2.337e-71	81.56	serum response factor [Trichogramma pretiosum]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold280_size224562	supercontig	scaffold280_size224562:178471..181954 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:regulation of transcription
Note	DNA-dependent

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold280_size224562-snap-gene-1.17-mRNA-1	maker-scaffold280_size224562-snap-gene-1.17-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold280_size224562:178471..181954+

gene from alignment at scaffold280_size224562:178471..181954+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold280_size224562-snap-gene-1.17 ID=maker-scaffold280_size224562-snap-gene-1.17|Name=serum response factor|organism=Tigriopus kingsejongensis|type=gene|length=3484bp|location=Sequence derived from alignment at scaffold280_size224562:178471..181954+ (Tigriopus kingsejongensis)
ATGATGCAGAGTGCCAATAACGGCCATTCCCACGGGTCACACCCGTCTGC
AGCCTCCCACTACCCGCCTCATCTCGATCCTCGCTACATGGAATACGCCA
ACATGGCCCATCACCACCCCGGGGTGGTGGACCCTCATCTCCATTACGGG
TTGCCACCCGCATCGCTGCCGCAAAGCCACGTGGGCGGTTCCGCTCTCAA
GAGAAATGCCGACTCGGCTGGTCTCGACATGATGGGTGGCACCCCGTCCT
CGGCCGGGGGCGTGTCCTCCGACGAGGATAGTGACATCAAACCGCCCCTG
GGCGATCGGACGGCCGGCACTGGGCGGGGCAAGAGCACTGGCCCAGATCC
GGCCACCGGCAAAAAGACCAAAGGCCGAGTGAAAATCAAAATGGAGTTCA
TCGACAACAAGCTCCGAAGGTACACCACCTTCTCCAAGCGGAAGACAGGC
ATCATGAAGAAGGTAGGTTCGCCGTTGTTGTGTCACACTGGGAACTCTTC
CCCGAAATGGCCCACCTAAGAATGGGCAGGAAGAGGAAGCTGGGACGGAG
GTTTCAAGGGGAGTCGGACTGCATCTGGCTATTTTCGCCCACTCGGGCCA
AGGGCGCAAAGTGGCGCTTGAACTTTCCTCCTGAGGCCAATTTGCCTGAT
TTGCCCATATTCAGCTCTGAAACAGAGCCAAAAACAACGTTCTCTCGTCT
CATGCTTTCCCTAAAGAAACATGAGAGGAACAGGACGCAATTGCTGTCCT
CGAGAACTTGCGTAGATCACATCTGCGGCCAATTTTTGAGCCTGTTTTGG
CCATGCCAAGCGCTCCCAATTAGCCTCACTTTCAGCTCCATTTCTGTACC
ATGGGATCAACTATAATGTATCGAAAAGATTCTCTTGGTCGACGAGAAAG
TGTGCTTCTACTCAAATGAAATGGGTGCTAGGTTTGCCTAATTTCAGATG
AGTCGATAATTGCAATTGCTCTCTGACCCTACTATTTACGCATTGGCATA
TCCTGGCTTTTCAGAACCAGTCCCTTGATTGCGCCTCTGCGTTGGATTAA
AGTTCAAAGTATTCGAATTCATTGAAAATATTTTGTTGCCACATAAACAG
GGATAGCCACGCTGAATATTTTTGTTCAAACGTTACGGTTAATACAACAA
AATGTGAGTGAACAATATATTTGTATAAATCACGACACCTACGTACACGT
CAGGAGAGAACCCAGCAGCCAATTGGTGCACAATTAAAGTAACAGATCAA
TGAGCAGCCATAAATATGGATATTCAACTCTAAAACATTTGCATGGCTAC
ATGCAATATTGCAATAATACGAGTTGTTCGAGATACGTTTGAATCATTTT
TGTATCAAGCAGAATATGGCGTGATACTAGTTTTAATTAACAAGCTGTGA
TTTCTTGTGATACTGTTTCACTGATCTGCTTCTGTCAGAGCCTGATACAA
GATATTACGCTAGCATATCTGTCTCGAATATGTGCTCATACGTGTATAGC
ATTGCGAGTATTTCAAGTGGGTTGGACATGTTCCTGTGAAATTTGCTTAG
CTCCATAGACTTTGATTAACACTCAGGTATCAAAATTTCACCCAGAGTTG
GGCTTTTGATAGGGTTGATATCTTGCCACCCATTGAGCTTTGTTTCTTCC
CCTCCAAGTTGATAAAGTATGTGTTCTCGCAATTGTGTGGTCATCTTGGT
CTTGTGAGCCATATATCATGCCACTTGATATGTCCAAGCGATATTCATCT
TTTCACTGCGACTCTAAATTTTACTGTCACCCAAGCTATCGGCCTCCCTT
TGGGTTCGATAGACTTTATTTCTGGAAAACGCTTGGCAGATGCGAGTTCA
AATTTGAAATGAAATGTTCATTCATTGCCCGACAGGCCTGAGAAACCATG
TCATATCACCATTTTTCTAGGTAAAACGCTTTTCTCCCAGGCCTGATTGT
ACTTGTTGACCGCTAGCGATTTCCTAATGCCTAAAGTGGCCCGAACCATA
TTTGTCCATCTCCAAAAATGGCGGCTGATTCGCTGCACCTAGTTCCTCTC
ATCCCCGAGTCAAATCCTCCACCTTGAGCAACGGCAATTGAAGTTTAGCA
AAGCTATACGGTTGTAAAAGCACGGTCTCAAAGCCCCTTAATTTTATTTG
TATCTTTGTATCTCTCATTGAAGCACCTGAATTCTTCAAGCAAGATTGCT
AAACACTATCGTTGCATTCTTAAGAGCGTTCATTGACTCTGACGGGGCCA
AACAATGATCGTTATACACTTGGATGAAAATATGCATTGCAAACCTGATA
ATAGGAATTGGCACAGTGTGGGGATCATCAAACCACTGCATTGCGGTCAA
ATTATGATAAGCAAAGAAGCTACTTGCTCTGTTGAATCTTCAACATAGAT
GTACGTTTGATCAGGGTTTACCTCAAGGTAGCCAAATGCTATCATCGAAA
AGCGGGACCCGTTTTAGTTGTCAAAATGTGGATACACCGGGCAAAAGCCC
TATCCAAGGCTCGAAGATTGAGATTGTGGCAAAAGCAGTGAGCACTTAAA
AAACTTTCTTTTGCTTGAGAACTAAGTGGCACATTAGTAAAACTTAACAA
ATGCAATAGTGTGGGTATAGAAGCAGCCTGTTCTGGAGCGTCAGCAATTT
GCCATGGTTCAGTTTGCTCGGTGCTATAATAAGTAAGCGCCTTGATCTAG
ATCGCTGTGAAAAAAATAGTTCATTCAAATGTAGGCAGGTTTGCTCATCT
CTCGAAGATTGTACAATAAGTCTAAATGTATTCAATTTGGGGTTTTCTGA
ATGGCGGTCCTCGCTCAAATTCAAAATGATAAGGCTTTTAGCTTGAAGTT
TGAGCCTTTGGAAATAGCTGATTCACTCCCCAGCGGCTTTTCTATGTTCC
CAATGTTTACGAAGTGTCCTTTTGCATTTCAGGCCTATGAGCTCTCAACT
CTGACCGGTACTCAGGTGATGCTTCTGGTGGCTTCGGAGACGGGTCACGT
GTACACGTTTGCCACCCGTAAGCTCCAGCCTATGATCACCTCAGATGCTG
GCAAGGCTCTCATTCAGACCTGCCTGAACTCCCCTGACCCGATGCCTCCA
GGCACGTCGGTCAACGGGGATCAGCGCATGTCGGCCACGGGTTACGAAGA
GACTGAGCTCACCTACAACATTGCCGCTGCTGCTGACGAGGAACAGCAAC
AAAAAGTAAGACAAATGATGTACAACAGCCACCACGCTGCAGCTGCAGCT
GCCCACCATCACGCCTACTCTCCGGCCTCGTCGGCCGCAGCCGCCGCACT
GTTCACGCCGCATTCATCGGCCACCGGTCTGAATTCCATGAGTGGGCACT
CGCCGTACGGGTCCCATCCGGGGCCCTCCCCTAGTCCCGCCTCGTCTGCC
TATGGCGGAGGCATGTCTTTATCCCCTGGCCCCACCTCCCACCACTCGCC
CCCCTTTGCCCCGCCCTCCCATTCGCAAAGATGA

Synonyms

The feature 'serum response factor' has the following synonyms


Synonym
Tk08832

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