low quality protein: tubulin beta chain, maker-scaffold291_size219542-snap-gene-1.20 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Match: EMLSAG00000006934 (supercontig:LSalAtl2s:LSalAtl2s393:534131:535258:-1 gene:EMLSAG00000006934 transcript:EMLSAT00000006934 description:"augustus_masked-LSalAtl2s393-processed-gene-5.1") HSP 1 Score: 483.797 bits (1244), Expect = 9.536e-173 Identity = 236/258 (91.47%), Postives = 251/258 (97.29%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVH+QAGQCGNQIG KFWEIISDEHG+DPTG+Y G SDLQLER NVYYNEA+GG YVPRA+LVDLEPGTMDSVRS PYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELV+SVLDVVRKE+ESCDCLQGFQ+THSLGGGTGSG+GTLLISK+REEYPDRIM TYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETFCIDNEALYDICFRTLKLT+PTYGDLNHLVSLTMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHMQAGQCGNQIGTKFWEIISDEHGMDPTGTYRGDSDLQLERTNVYYNEASGGMYVPRAILVDLEPGTMDSVRSSPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVESVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYDICFRTLKLTSPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 258
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Match: EMLSAG00000012488 (supercontig:LSalAtl2s:LSalAtl2s91:475359:477762:-1 gene:EMLSAG00000012488 transcript:EMLSAT00000012488 description:"maker-LSalAtl2s91-augustus-gene-4.6") HSP 1 Score: 484.567 bits (1246), Expect = 5.106e-172 Identity = 237/258 (91.86%), Postives = 249/258 (96.51%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVHIQAGQCGNQIGAKFWEIISDEHG+DP G Y GT+DLQLER++VYYNEA KYVPRA+L+DLEPGTMDSVRSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELV SVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLT PTYGDLNHLVSLTMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPNGQYAGTTDLQLERIDVYYNEAGNSKYVPRAILIDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVXSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 152.14 bits (383), Expect = 1.473e-42 Identity = 72/83 (86.75%), Postives = 80/83 (96.39%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYEDEEGEVDV 340 MA+TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA+ D+++++ DEEGE +V Sbjct: 363 MASTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASVDDDEYF-DEEGEAEV 444
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Match: EMLSAG00000012802 (supercontig:LSalAtl2s:LSalAtl2s975:15052:16371:-1 gene:EMLSAG00000012802 transcript:EMLSAT00000012802 description:"augustus_masked-LSalAtl2s975-processed-gene-0.1") HSP 1 Score: 470.7 bits (1210), Expect = 1.258e-166 Identity = 229/252 (90.87%), Postives = 245/252 (97.22%), Query Frame = 0 Query: 7 IQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 +QAGQCGNQIG KFWEIISDEHG+DPTG+Y GTSDLQLER NVYYNEA+GG YVPRAVLVDLEPGTMDSVRS PYG++FRPDNFVFGQSGAGNNWAKGHYTEGAELV+SVLDVVRKE+ESCDC QGFQ+THSLGGGTGSG+GTLLISK+REEYP+RIM TYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETFCIDNEALYDICFRTLKLT+PTYGDLNHLVSLTMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MQAGQCGNQIGTKFWEIISDEHGIDPTGTYHGTSDLQLERTNVYYNEASGGMYVPRAVLVDLEPGTMDSVRSSPYGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELVESVLDVVRKESESCDCXQGFQLTHSLGGGTGSGMGTLLISKVREEYPERIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYDICFRTLKLTSPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 252 HSP 2 Score: 139.043 bits (349), Expect = 8.373e-38 Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 325 MA TFIGNSTAIQE+FKRIS+QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA Sbjct: 357 MAXTFIGNSTAIQEIFKRISDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 424
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Match: EMLSAG00000001054 (supercontig:LSalAtl2s:LSalAtl2s1173:83588:119241:-1 gene:EMLSAG00000001054 transcript:EMLSAT00000001054 description:"maker-LSalAtl2s1173-augustus-gene-0.19") HSP 1 Score: 470.7 bits (1210), Expect = 7.786e-164 Identity = 236/252 (93.65%), Postives = 247/252 (98.02%), Query Frame = 0 Query: 7 IQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 +QAGQCGNQIGAKFWEIISDEHG+DPTG+Y G SDLQLER+NV YNEA+GGKYVPRAVLVDLEPGTMDSVRSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ+THSLGGG GSG+GTLLISKIREEYPDRIM TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MQAGQCGNQIGAKFWEIISDEHGIDPTGTYHGDSDLQLERINVXYNEASGGKYVPRAVLVDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 252 HSP 2 Score: 146.362 bits (368), Expect = 1.925e-39 Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEE 328 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA++E Sbjct: 357 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAEDE 427
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Match: EMLSAG00000011226 (supercontig:LSalAtl2s:LSalAtl2s76:1083015:1084748:-1 gene:EMLSAG00000011226 transcript:EMLSAT00000011226 description:"augustus_masked-LSalAtl2s76-processed-gene-10.4") HSP 1 Score: 462.611 bits (1189), Expect = 3.019e-163 Identity = 219/258 (84.88%), Postives = 247/258 (95.74%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVH+QAGQCGNQIG+KFWE+ISDEH + P+G+YEG QLER+ VYYNEA+ KYVPRA+L+DLEPGTM+++RSG YGQ+F+PDNFVFGQSGAGNNWAKGHYTEGAELV+SV+DVVRKEAE+CDC+QGFQ+THSLGGGTGSG+GTLLISK+REEYPDRIM TYSV+PSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL++PTYGDLNHLVS+TMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHSISPSGAYEGNDPQQLERIEVYYNEASSSKYVPRAILLDLEPGTMNAIRSGTYGQIFKPDNFVFGQSGAGNNWAKGHYTEGAELVESVMDVVRKEAETCDCIQGFQLTHSLGGGTGSGMGTLLISKMREEYPDRIMKTYSVIPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSITMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 143.665 bits (361), Expect = 2.170e-39 Identity = 70/83 (84.34%), Postives = 76/83 (91.57%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYEDEEGEVDV 340 MA+TFIGNSTAIQE+FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A AD+ Y+DEE D+ Sbjct: 363 MASTFIGNSTAIQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAEADDYA-YDDEENPDDL 444
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Match: EMLSAG00000002099 (supercontig:LSalAtl2s:LSalAtl2s1395:101524:103761:1 gene:EMLSAG00000002099 transcript:EMLSAT00000002099 description:"maker-LSalAtl2s1395-snap-gene-0.23") HSP 1 Score: 270.011 bits (689), Expect = 1.149e-88 Identity = 151/375 (40.27%), Postives = 214/375 (57.07%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTG--SYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM------------------------------------AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYEDEEGE 337 MRE + I GQ G Q+G WE+ EHG P G + + + + + +++E GGK+VPRA+ VDLEP +D VR+G Y QLF P+ V G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQGF + HS GGGTGSG +LL+ ++ +Y + + +S+ P+P+V+ VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S IT LRF G LN DL + N+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L + Y+E D D E EEG+ Sbjct: 1 MRECLSIHIGQAGCQMGNACWELYCLEHGXQPDGLXPSDKVTAITDDSFSTFFSETGGGKHVPRAIFVDLEPSVIDEVRTGTYRQLFHPEQMVTGKEDAANNYARGHYTIGKEMVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVAXAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDLPTYTNLNRLIGQIVSSITASLRFDGALNVDLNEFQTNLTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKXQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAAL---EKDYEEVGMDSND-AEGEEGD 371
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Match: EMLSAG00000005772 (supercontig:LSalAtl2s:LSalAtl2s310:106023:107838:-1 gene:EMLSAG00000005772 transcript:EMLSAT00000005772 description:"maker-LSalAtl2s310-augustus-gene-1.30") HSP 1 Score: 231.491 bits (589), Expect = 8.011e-73 Identity = 120/260 (46.15%), Postives = 165/260 (63.46%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQL--ERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MRE + + GQ G QIG WE+ EHG+ P G + + N +++E GK+VPRAV VDLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQGF + HS GGGTGSG +LL+ ++ +Y + + +S+ P+P+VS VVEPYNA L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S IT LRF G LN DL + N++ Sbjct: 1 MRECISVHIGQAGCQIGNACWELYCLEHGIQPDGQMPSDKTIGAGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260 HSP 2 Score: 62.003 bits (149), Expect = 6.222e-11 Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0 Query: 253 LAVNMMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 319 LA + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 368 LAKVPRCVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Match: EMLSAG00000010676 (supercontig:LSalAtl2s:LSalAtl2s707:155162:174325:-1 gene:EMLSAG00000010676 transcript:EMLSAT00000010676 description:"maker-LSalAtl2s707-augustus-gene-1.14") HSP 1 Score: 214.927 bits (546), Expect = 1.205e-66 Identity = 109/287 (37.98%), Postives = 167/287 (58.19%), Query Frame = 0 Query: 2 REIVHIQAGQCGNQIGAKFWEIISDEHGVDPTG---SYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMMAATFIGNSTAIQELFKRISEQFTAMFR 285 REI+ I GQ G QIG WE+ EHG+DP G +++ + +++E G KYVPRA+ +DLEP +D +R+G Y +LF P+ + + A NN+A+GHYT G + S ++ +R + C+ LQGF++ HS GGGTGSG +LL+ + + +P + V +S+ P+P++S +VEPYN L H +E D F +DN A+Y++C + L L +P+Y +LN L++ +S IT LRF G LN DL + N++ I A S+ F M + Sbjct: 3 REILSIHLGQAGXQIGNACWELYCLEHGIDPNGFISEQNESTNPERNSFQTFFHEGQGSKYVPRAIFIDLEPSVIDEIRTGSYKRLFHPNQLLSDKEDAANNYARGHYTIGQNFIHSTVEQIRNMVDQCESLQGFKVFHSFGGGTGSGFTSLLMEVLTDNFPKKSKVGFSIYPAPEMSTAIVEPYNTILYTHATLELCDVAFLVDNHAIYELCVKKLHLDSPSYSNLNRLIAQVISTITASLRFDGALNVDLCEFQTNLVPYPRIHFPLATYGPVVSTSDAFHQMLK 289 HSP 2 Score: 64.6994 bits (156), Expect = 7.136e-12 Identity = 31/88 (35.23%), Postives = 57/88 (64.77%), Query Frame = 0 Query: 247 NADLRKLAVNMMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYEDE 334 N DL K++ A + N+TAI++ +++++ +F MF ++AF+HWY GEGM+E EF+E+ ++ L +Y++ + EE Y+D+ Sbjct: 342 NGDLAKVS---RAVCCLSNTTAIKDAWEKLNHKFDLMFSKRAFVHWYVGEGMEEGEFSESREDLAALELDYEELLNNESSEE--YDDD 424
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Match: EMLSAG00000009110 (supercontig:LSalAtl2s:LSalAtl2s574:155788:161572:-1 gene:EMLSAG00000009110 transcript:EMLSAT00000009110 description:"maker-LSalAtl2s574-augustus-gene-1.14") HSP 1 Score: 217.624 bits (553), Expect = 2.173e-64 Identity = 112/255 (43.92%), Postives = 158/255 (61.96%), Query Frame = 0 Query: 7 IQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLE---RVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 I GQ G QIG K W++ S EHG+D G+ SD E ++ +Y + GK+VPR + +DLEP +D +RSGPY +LF P + V G+ A NN+A+GHYT G + D +D +R+ +CD LQGF + HS GGGTGSG +LL I++EY + + ++V PSP+VS VVEPYN L H +++ + +F + NEA+YDIC L + PTY DLN L++ S +T LRF G LN DL + N++ Sbjct: 423 IHIGQAGCQIGEKCWQLFSLEHGIDEEGNVPPRSDNSPEGSRDLSTFYEISQTGKHVPRCLFLDLEPTVVDGIRSGPYRKLFNPMSIVHGREDAANNFARGHYTVGNQFFDVAMDRIRRAVTNCDALQGFLIYHSFGGGTGSGFASLLSEHIKDEYKRKCSLNFTVYPSPRVSTAVVEPYNTILGTHFTMDSMNCSFLVGNEAIYDICLNKLDVQRPTYVDLNRLIAQVTSSVTASLRFEGSLNMDLNEFQTNLV 677 HSP 2 Score: 71.633 bits (174), Expect = 7.275e-14 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 0 Query: 241 RFPGQLNADLRKLAVNMMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ------EATADEEDFYEDEEGE 337 +FP + D LA +A + N+TA+ E + RI +F +F ++AF+HWYTGEGMDE EF EA N+ L +Y + T ++E FYE+ E Sbjct: 774 QFPMKAIPD-SNLAECPKSACMLANTTAMAEAWNRIGHKFDLLFSKRAFVHWYTGEGMDEDEFVEARENVAALEKDYYEVSGDTPSDSPTNNKESFYEEAAME 875
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Match: EMLSAG00000002834 (supercontig:LSalAtl2s:LSalAtl2s1635:89512:92973:1 gene:EMLSAG00000002834 transcript:EMLSAT00000002834 description:"maker-LSalAtl2s1635-snap-gene-0.11") HSP 1 Score: 209.149 bits (531), Expect = 2.480e-64 Identity = 109/248 (43.95%), Postives = 159/248 (64.11%), Query Frame = 0 Query: 16 IGAKFWEIISDEHGVDPTGSYE-----GTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 +G WE+ EHG+ P G G++D + N +++E GK+VPRAV VDLEP +D +R+G Y Q F P+ V G+ A NN+A+GHYT G E++D VLD +RK +++C LQGF + HS GGGTGSG +LL+ ++ +Y + + +S+ P+P+V+ VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S IT LRF G LN DL + N++ Sbjct: 1 MGNACWELYCLEHGIQPDGHMPSDKTVGSAD---DSFNTFFSETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQXFHPEQLVTGKEDAANNYARGHYTIGKEILDLVLDRIRKLSDNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 245 HSP 2 Score: 68.9366 bits (167), Expect = 3.631e-13 Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 0 Query: 253 LAVNMMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYEDEEGE 337 LA A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E D D EDEEGE Sbjct: 353 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE---DLAALEKDYEEVGMDSLD-PEDEEGE 433
BLAST of low quality protein: tubulin beta chain vs. SwissProt
Match: gi|12585365|sp|O17449.1|TBB1_MANSE (RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin) HSP 1 Score: 495.738 bits (1275), Expect = 5.957e-175 Identity = 242/258 (93.80%), Postives = 255/258 (98.84%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVHIQAGQCGNQIGAKFWEIISDEHG+DPTG+Y G SDLQLER+NVYYNEA+GGKYVPRA+LVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+TPTYGDLNHLVSLTMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 146.362 bits (368), Expect = 5.593e-39 Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEE 328 M+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADE+ Sbjct: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADED 433
BLAST of low quality protein: tubulin beta chain vs. SwissProt
Match: gi|1174596|sp|P41937.1|TBB4_CAEEL (RecName: Full=Tubulin beta-4 chain; AltName: Full=Beta-4-tubulin) HSP 1 Score: 495.352 bits (1274), Expect = 9.372e-175 Identity = 241/258 (93.41%), Postives = 255/258 (98.84%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVHIQAGQCGNQIGAKFWE+ISDEHG+DPTG+Y G SDLQLER+NVYYNEA+GGKYVPRA LVDLEPGTMDSVR+GP+GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAESCDCLQGFQMTHSLGGGTGSG+GTLLISKIREEYPDRIM+T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVS+TMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 148.673 bits (374), Expect = 7.818e-40 Identity = 70/82 (85.37%), Postives = 78/82 (95.12%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYEDEEGEVD 339 MAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAD+E +++ + +V+ Sbjct: 363 MAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEGEFDEHDQDVE 444
BLAST of low quality protein: tubulin beta chain vs. SwissProt
Match: gi|25091355|sp|Q24560.2|TBB1_DROME (RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin) HSP 1 Score: 493.812 bits (1270), Expect = 3.207e-174 Identity = 243/258 (94.19%), Postives = 254/258 (98.45%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVHIQAGQCGNQIGAKFWEIISDEHG+D TG+Y G SDLQLER+NVYYNEA+GGKYVPRAVLVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 140.198 bits (352), Expect = 1.072e-36 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 324 M+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT Sbjct: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
BLAST of low quality protein: tubulin beta chain vs. SwissProt
Match: gi|121987496|sp|Q27U48.1|TBB1_GLOMM (RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin) HSP 1 Score: 493.812 bits (1270), Expect = 3.207e-174 Identity = 243/258 (94.19%), Postives = 254/258 (98.45%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVHIQAGQCGNQIGAKFWEIISDEHG+D TG+Y G SDLQLER+NVYYNEA+GGKYVPRAVLVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 140.198 bits (352), Expect = 1.072e-36 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 324 M+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT Sbjct: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
BLAST of low quality protein: tubulin beta chain vs. SwissProt
Match: gi|135489|sp|P11833.1|TBB_PARLI (RecName: Full=Tubulin beta chain; AltName: Full=Beta-tubulin) HSP 1 Score: 493.812 bits (1270), Expect = 3.905e-174 Identity = 241/258 (93.41%), Postives = 254/258 (98.45%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVH+QAGQCGNQIGAKFWE+ISDEHG+DPTG+Y G SDLQLER+NVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 140.584 bits (353), Expect = 7.268e-37 Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 325 M+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA Sbjct: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of low quality protein: tubulin beta chain vs. SwissProt
Match: gi|401166|sp|P30883.1|TBB4_XENLA (RecName: Full=Tubulin beta-4 chain) HSP 1 Score: 493.426 bits (1269), Expect = 4.787e-174 Identity = 241/258 (93.41%), Postives = 254/258 (98.45%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVH+QAGQCGNQIGAKFWE+ISDEHG+DPTG+Y G SDLQLER+NVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 140.584 bits (353), Expect = 7.885e-37 Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 325 M+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA Sbjct: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of low quality protein: tubulin beta chain vs. SwissProt
Match: gi|55977480|sp|P68371.1|TBB4B_HUMAN (RecName: Full=Tubulin beta-4B chain; AltName: Full=Tubulin beta-2 chain; AltName: Full=Tubulin beta-2C chain >gi|55977481|sp|P68372.1|TBB4B_MOUSE RecName: Full=Tubulin beta-4B chain; AltName: Full=Tubulin beta-2C chain >gi|93140718|sp|Q3MHM5.1|TBB4B_BOVIN RecName: Full=Tubulin beta-4B chain; AltName: Full=Tubulin beta-2C chain) HSP 1 Score: 493.041 bits (1268), Expect = 6.023e-174 Identity = 241/258 (93.41%), Postives = 254/258 (98.45%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVH+QAGQCGNQIGAKFWE+ISDEHG+DPTG+Y G SDLQLER+NVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 135.576 bits (340), Expect = 5.202e-35 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 322 M+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ Sbjct: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
BLAST of low quality protein: tubulin beta chain vs. SwissProt
Match: gi|29337144|sp|Q9NFZ6.1|TBB2_ECHMU (RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-tubulin 2) HSP 1 Score: 492.271 bits (1266), Expect = 1.226e-173 Identity = 238/258 (92.25%), Postives = 254/258 (98.45%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVHIQAGQCGNQIGAKFWE+ISDEHG+DPTG+Y G SDLQLER+NVYYNEA+GGKYVPRA+LVDLEPGTMDSVR+GP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV+RKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+ PTYGDLNHLVS TMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRAGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSNPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 138.272 bits (347), Expect = 5.129e-36 Identity = 63/68 (92.65%), Postives = 68/68 (100.00%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 325 M+ATF+GNSTAIQELF+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA Sbjct: 363 MSATFVGNSTAIQELFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of low quality protein: tubulin beta chain vs. SwissProt
Match: gi|81892373|sp|Q6P9T8.1|TBB4B_RAT (RecName: Full=Tubulin beta-4B chain; AltName: Full=Tubulin beta-2C chain) HSP 1 Score: 491.5 bits (1264), Expect = 2.939e-173 Identity = 240/258 (93.02%), Postives = 253/258 (98.06%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVH+QAGQCGNQIGAKFWE+ISDEHG+DPTG+Y G SDLQLER+NVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+T CLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTACLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 135.576 bits (340), Expect = 5.255e-35 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 322 M+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ Sbjct: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
BLAST of low quality protein: tubulin beta chain vs. SwissProt
Match: gi|417855|sp|P32882.1|TBB2_CHICK (RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-tubulin class-II) HSP 1 Score: 490.73 bits (1262), Expect = 5.480e-173 Identity = 239/258 (92.64%), Postives = 253/258 (98.06%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVHIQAGQCGNQIGAKFWE+ISDEHG+DPTGSY G SDLQLER+NVYYNEATG KYVPRA+LVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM T+SV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMV 258 HSP 2 Score: 140.584 bits (353), Expect = 7.339e-37 Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 325 M+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA Sbjct: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of low quality protein: tubulin beta chain vs. nr
Match: gi|1108484278|emb|CRK87275.1| (CLUMA_CG001077, isoform A [Clunio marinus]) HSP 1 Score: 643.654 bits (1659), Expect = 0.000e+0 Identity = 318/340 (93.53%), Postives = 333/340 (97.94%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEE-DFYEDEEGEVD 339 MREIVHIQAGQCGNQIGAKFWEIISDEHG+D TG+Y G SDLQLER+NVYYNEA+GGKYVPRAVLVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSG+TTCLRFPGQLNADLRKLAVNMM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADE+ +F E++E EVD Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFDEEQEAEVD 340
BLAST of low quality protein: tubulin beta chain vs. nr
Match: gi|1227098414|gb|OXU22587.1| (hypothetical protein TSAR_000622 [Trichomalopsis sarcophagae]) HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0 Identity = 308/324 (95.06%), Postives = 321/324 (99.07%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 324 MREIVHIQAGQCGNQIGAKFWEIISDEHG+DPTG+Y G SDLQLER+NVYYNEA+GGKYVPRA+LVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+TPTYGDLNHLVSLTMSG+TTCLRFPGQLNADLRKLAVNMM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 324 HSP 2 Score: 464.922 bits (1195), Expect = 1.435e-155 Identity = 228/264 (86.36%), Postives = 250/264 (94.70%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEAT------GGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMM 258 MREIVH+QAGQCGNQIGAKFWE+IS+EHG+D +G Y G SDLQLER++VYYNEA+ GGKYVPRA+L+DLEPGTMD+VRSG YG+LFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM TYSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLK++ P+YGDLNHLVSLTMSG+TTCLRFPGQLNADLRKLAVNM+ Sbjct: 339 MREIVHLQAGQCGNQIGAKFWEVISEEHGIDQSGIYHGDSDLQLERIDVYYNEASVATSTNGGKYVPRAILLDLEPGTMDAVRSGAYGKLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 602 HSP 3 Score: 143.28 bits (360), Expect = 4.584e-34 Identity = 69/80 (86.25%), Postives = 75/80 (93.75%), Query Frame = 0 Query: 258 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYEDEEGE 337 M++TFIGN+TAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT EEDF ++ G+ Sbjct: 707 MSSTFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATT-EEDFETEDAGD 785
BLAST of low quality protein: tubulin beta chain vs. nr
Match: gi|1253265805|gb|PDM61987.1| (HLH domain containing protein [Pristionchus pacificus]) HSP 1 Score: 623.239 bits (1606), Expect = 0.000e+0 Identity = 305/340 (89.71%), Postives = 324/340 (95.29%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNMMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYEDEEGEVDV 340 MREIVH+QAGQCGNQIGAKFWE+ISDEHG+ P GSY G SDLQLER+NVYYNEA GGKYVPRAVLVDLEPGTMDSVRSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD VLDVVRKEAE CDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM ++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLT P YGDLNHLVS+TMSG+TTCLRFPGQLNADLRKLAVNMM+ATFIGNSTAIQELFKRISEQF AMFRRKAFLHWYTGEGMDEMEF+EAESNMNDLVSEYQQYQEA+A+++ +E EGE D+ Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGSYAGESDLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTNPNYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMMSATFIGNSTAIQELFKRISEQFGAMFRRKAFLHWYTGEGMDEMEFSEAESNMNDLVSEYQQYQEASAEDDGEFEG-EGETDM 339
BLAST of low quality protein: tubulin beta chain vs. nr
Match: gi|1233630808|gb|OZF84245.1| (hypothetical protein FL82_15407, partial [Caenorhabditis remanei] >gi|1338211151|gb|POM52080.1| hypothetical protein FL81_01352 [Caenorhabditis remanei]) HSP 1 Score: 620.542 bits (1599), Expect = 0.000e+0 Identity = 311/367 (84.74%), Postives = 331/367 (90.19%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNM----------------------------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYEDEEGEVD 339 MREIVHIQAGQCGNQIGAKFWE+ISDEHG+DPTG+Y G SDLQLER+NVYYNEA+GGKYVPRA LVDLEPGTMDSVR+GP+GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAESCDCLQGFQMTHSLGGGTGSG+GTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVS+TMSG+TTCLRFPGQLNADLRKLAVNM MAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAD+E +++ + +V+ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEGEFDEHDQDVE 367
BLAST of low quality protein: tubulin beta chain vs. nr
Match: gi|1233670876|gb|OZG23056.1| (hypothetical protein FL83_02252, partial [Caenorhabditis latens]) HSP 1 Score: 615.92 bits (1587), Expect = 0.000e+0 Identity = 311/380 (81.84%), Postives = 331/380 (87.11%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNM-----------------------------------------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYEDEEGEVD 339 MREIVHIQAGQCGNQIGAKFWE+ISDEHG+DPTG+Y G SDLQLER+NVYYNEA+GGKYVPRA LVDLEPGTMDSVR+GP+GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAESCDCLQGFQMTHSLGGGTGSG+GTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVS+TMSG+TTCLRFPGQLNADLRKLAVNM MAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAD+E +++ + +V+ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRCSSTNPPEFPLQIRVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEGEFDEHDQDVE 380
BLAST of low quality protein: tubulin beta chain vs. nr
Match: gi|931572434|ref|XP_014200768.1| (PREDICTED: LOW QUALITY PROTEIN: tubulin beta chain [Pan paniscus]) HSP 1 Score: 606.675 bits (1563), Expect = 0.000e+0 Identity = 304/356 (85.39%), Postives = 319/356 (89.61%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNM--------------------------------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 324 MREIVHIQAGQCGNQIGAKFWE+ISDEHG+DPTG+Y G SDLQL+R++VYYNEATGGKYVPRA+LVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TTCLRFPGQLNADLRKLAVNM MA TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+AT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 356
BLAST of low quality protein: tubulin beta chain vs. nr
Match: gi|1108464096|emb|CRL07770.1| (CLUMA_CG020724, isoform A [Clunio marinus]) HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0 Identity = 297/342 (86.84%), Postives = 319/342 (93.27%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNM---------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEDFYED 333 MREIVH+Q GQCGNQIG+KFWEIISDEHG+DP G Y G +DLQLER+NVYYNE G +YVPR+VLVDLEPGTMDSVRS PYG+LFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL+V+RKE+E CDCLQGFQ+THSLGGGTGSG+GTLLI+KIREEYPDRI+ TYSV+PSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLT+P+YGDLNHLVS+TMSG+TTCLRFPGQLNADLRKLAVNM M ATFIGNSTAIQE+FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADE+ YED Sbjct: 1 MREIVHLQVGQCGNQIGSKFWEIISDEHGIDPNGHYHGDTDLQLERINVYYNEVNGNRYVPRSVLVDLEPGTMDSVRSSPYGKLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLEVIRKESEGCDCLQGFQLTHSLGGGTGSGMGTLLIAKIREEYPDRILSTYSVIPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTSPSYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPATFIGNSTAIQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDVEYED 342
BLAST of low quality protein: tubulin beta chain vs. nr
Match: gi|966653950|gb|KTF88804.1| (hypothetical protein cypCar_00012704 [Cyprinus carpio]) HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0 Identity = 303/362 (83.70%), Postives = 319/362 (88.12%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNM--------------------------------------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 324 MREIVHIQAGQCGNQIGAKFWE+ISDEHG+DPTG+Y G SDLQL+R++VYYNEATGGKYVPRA+LVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TTCLRFPGQLNADLRKLAVNM MA TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+AT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 362
BLAST of low quality protein: tubulin beta chain vs. nr
Match: gi|565298281|gb|ETE57399.1| (Tubulin beta-2A chain [Ophiophagus hannah]) HSP 1 Score: 602.823 bits (1553), Expect = 0.000e+0 Identity = 301/345 (87.25%), Postives = 317/345 (91.88%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVNM--------------------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 325 MREIVHIQAGQCGNQIGAKFWE+ISDEHG+D TGSY G SDLQLER++VYYNEA G KYVPRA+LVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM T+SV+PSPKVSDTVVEPYNATLSVHQLVENTDET+ IDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TTCLRFPGQLNADLRKLAVNM M+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDHTGSYHGDSDLQLERISVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 345
BLAST of low quality protein: tubulin beta chain vs. nr
Match: gi|820996791|ref|XP_012364365.1| (PREDICTED: tubulin beta-2A chain isoform X8 [Nomascus leucogenys] >gi|1214045394|ref|XP_021573985.1| tubulin beta-2A chain isoform X10 [Carlito syrichta]) HSP 1 Score: 601.282 bits (1549), Expect = 0.000e+0 Identity = 303/368 (82.34%), Postives = 318/368 (86.41%), Query Frame = 0 Query: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGVDPTGSYEGTSDLQLERVNVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGLGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTCLRFPGQLNADLRKLAVN-------------------------------------------MMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 325 MREIVHIQAGQCGNQIGAKFWE+ISDEHG+DPTGSY G SDLQLER+NVYYNEA G KYVPRA+LVDLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ+THSLGGGTGSG+GTLLISKIREEYPDRIM T+SV+PSPKVSDTVVEPYNATLSVHQLVENTDET+ IDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TTCLRFPGQLNADLRKLAVN MM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 368 The following BLAST results are available for this feature:
BLAST of low quality protein: tubulin beta chain vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 20
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BLAST of low quality protein: tubulin beta chain vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of low quality protein: tubulin beta chain vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold291_size219542:166827..168505+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold291_size219542-snap-gene-1.20 ID=maker-scaffold291_size219542-snap-gene-1.20|Name=low quality protein: tubulin beta chain|organism=Tigriopus kingsejongensis|type=gene|length=1679bp|location=Sequence derived from alignment at scaffold291_size219542:166827..168505+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'low quality protein: tubulin beta chain' has the following synonyms
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