lim domain and actin-binding protein 1, maker-scaffold299_size217019-snap-gene-1.31 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of lim domain and actin-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000001626 (supercontig:LSalAtl2s:LSalAtl2s128:1068810:1087380:1 gene:EMLSAG00000001626 transcript:EMLSAT00000001626 description:"maker-LSalAtl2s128-snap-gene-10.17") HSP 1 Score: 533.102 bits (1372), Expect = 5.086e-179 Identity = 342/733 (46.66%), Postives = 456/733 (62.21%), Query Frame = 0 Query: 53 ESLEIQDPFPIKAKTTTQEPTPTVPKGDGIEEKVDKKEDGENGERRKHHHKKHKKSRHIEKFEAFNKDKSNDPSREKSHRRKIHVRSKDPASIAKHLERSLNGGSSGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKGGSDQAGLTPRVSTDRYGIMEKLKRLQEGEDLDDLLAEIDDEMPDDPVAEEDPDEFGMTAMEKKTHKAEMMFTESGQDRRDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLLNSSANKVKKTRVDVRSENAKKFRDMFDKGEVPEGAANNADRVIKEKNHELEQMRKTKREQKEFFKKMEKGELDDPGSKPSEPKLLVGKFKDKS--NGEEGDQGDMELASLSNRFSFFENYKEK--EVTKTKKKTFRMSPSHEGEDIEGDLTTEVEEVRRHTTERDMARRDCKAGSVLKKFKEMEEKVLNGEDDVAEK----------------------RP-MKRFTPPRKLGSETGSDYSDDEYSDSDSYTDSYTG-SDYTDSDSESEEDETLKAIRATQRAKALRAKFEEWEHSQDAKEQERQMKLTDENGSSLDTASHLKKRFEALQLREEAESSGQQQQQPPKFRPKRFK 757 E E+ DPF TTT E K D+ + NG+++KH K E E + K+ S +KIHVRSKDP+ IA+ E+ N S KS+ RPIPPQ K+N CKIC KEPY+VER+VAEKSWWHKNCF+C C K+LNLDTY+SHEGVI+CK HHRELFQPK VK DII+V + +T + ++ DV K + +G+ K+ GLE+LDVGSKFKMFE G + G +S+DRYGIMEKLKRLQ+GE+L+DLLAEID+E+ P + E+ DE GMT ++KK H AE +F E G +R+++ A++R++ELK LR+ L G ++ ++ +F+D++ +K+KKT+VDVRSENAKKFRDMFDKGE PE N D+ EKN EL+Q+RK K +Q +FFK+ME+G+L+D K +PKLLVGK K S N ++ D+ +M SLSN+F+FFE+++EK E+ K KKT R+SPS + E D + EE +++ +E ++A+R+CKA SVL KFK+ME+KVLNGEDDV + RP +K+FTPPRK G+ +DS G E E DETL+AIRAT RAK LRAKFEEWE S DAK+Q RQM + DENG SL+T S+LK +FE+ +L +E G++ P F+ KRFK Sbjct: 54 EEQELPDPFSSTPLTTTTEKDICTSK--------DEVKSSTNGDKKKHRSKD-------ENGEKKPRKKNKKNGEGDSRSKKIHVRSKDPSRIARQFEK--NSQSKVSKSRKDVKRPIPPQQKVNQICKICEKEPYLVERIVAEKSWWHKNCFKCHQCKKILNLDTYVSHEGVIYCKVHHRELFQPKTVKSDIIDVNSS----VNTSEVVQL---------------------TDVVKCNPDGE--KYAGLEHLDVGSKFKMFE-SGHGERGNGGGISSDRYGIMEKLKRLQDGEELEDLLAEIDEEL---PSSSEEEDEIGMTNVQKKMHHAEKLFEEGGTERKNKLAEERKKELKGLRKKLTGGTRDSIMKEFDDIMLQKDSKIKKTKVDVRSENAKKFRDMFDKGEXPEAVVPN-DKSTFEKNQELDQIRKKKHDQLDFFKQMEEGKLED---KSVKPKLLVGKIKQTSEENIDDIDEAEM---SLSNKFTFFEHFEEKQEELLKKGKKTSRLSPSRWTQGNEED--EDAEETKKYMSETEIAKRECKARSVLNKFKDMEQKVLNGEDDVKKSDDPDKPVMTALGFLGRLPGVGDRPRLKQFTPPRKHGT-----------------SDSENGSDYSYSESEEEEVDETLRAIRATARAKQLRAKFEEWEDSPDAKDQIRQMMIHDENGESLETTSNLKAKFESFKLGDENTPGGRR----PHFQIKRFK 708
BLAST of lim domain and actin-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000002662 (supercontig:LSalAtl2s:LSalAtl2s153:787144:792721:1 gene:EMLSAG00000002662 transcript:EMLSAT00000002662 description:"snap_masked-LSalAtl2s153-processed-gene-8.9") HSP 1 Score: 68.5514 bits (166), Expect = 6.627e-12 Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 0 Query: 179 TCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMS-HEGVI----FCKPHHRELFQPKV----VKDDIIEVKAKPR---RRSST 258 TC C K YVVER+ AE ++H++CFRC C+ LL L +Y+ +GV+ FC PH+ E + K +D+I +V+AK R RR +T Sbjct: 980 TCHFCSKRVYVVERMSAEGKFFHRSCFRCDYCNILLRLGSYVYKRDGVLGGKFFCIPHYTETYLEKYRYRRKEDEIRDVEAKRRNELRRLTT 1071
BLAST of lim domain and actin-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000010186 (supercontig:LSalAtl2s:LSalAtl2s676:246967:250571:1 gene:EMLSAG00000010186 transcript:EMLSAT00000010186 description:"maker-LSalAtl2s676-augustus-gene-2.40") HSP 1 Score: 53.5286 bits (127), Expect = 1.818e-7 Identity = 28/69 (40.58%), Postives = 37/69 (53.62%), Query Frame = 0 Query: 171 PPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPK 239 P PK C CG+ Y E VA WHK CF+C+TC+KLL+ T H+ ++CK H + PK Sbjct: 6 PESPK----CPKCGRSVYAAEEKVAGGLKWHKACFKCETCNKLLDSTTCAEHDKKLYCKTCHGRHYGPK 70
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Match: gi|115502251|sp|Q4KM31.1|LIMD2_RAT (RecName: Full=LIM domain-containing protein 2) HSP 1 Score: 69.707 bits (169), Expect = 5.953e-13 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 0 Query: 158 SGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPK 239 S G S R + + ++ TC C K Y +ERLVA+K +H +CF CK C L+L +Y + G +CKPH ++LF+ K Sbjct: 19 SSGNSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCKPHFQQLFKSK 100
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Match: gi|81895993|sp|Q8BGB5.1|LIMD2_MOUSE (RecName: Full=LIM domain-containing protein 2) HSP 1 Score: 68.9366 bits (167), Expect = 1.280e-12 Identity = 31/82 (37.80%), Postives = 47/82 (57.32%), Query Frame = 0 Query: 158 SGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPK 239 S G S R + + ++ TC C K Y +ERLVA+K +H +CF CK C L+L +Y + G +C+PH ++LF+ K Sbjct: 19 SSGSSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCRPHFQQLFKSK 100
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Match: gi|74752322|sp|Q9BT23.1|LIMD2_HUMAN (RecName: Full=LIM domain-containing protein 2) HSP 1 Score: 68.5514 bits (166), Expect = 1.559e-12 Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 0 Query: 159 GGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPK 239 GG S R + + ++ TC C K Y +ERLVA+K +H +CF CK C L+L +Y + G +CKPH ++LF+ K Sbjct: 19 GGSSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSK 99
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Match: gi|115502250|sp|Q1LZA7.1|LIMD2_BOVIN (RecName: Full=LIM domain-containing protein 2) HSP 1 Score: 67.781 bits (164), Expect = 2.861e-12 Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 0 Query: 154 NGGSSGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPK 239 GGSS S R + + ++ TC C K Y +ERLVA+K +H +CF CK C L+L +Y + G +CKPH ++LF+ K Sbjct: 18 GGGSS---STVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHSSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSK 100
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Match: gi|81907868|sp|Q4U4S6.1|XIRP2_MOUSE (RecName: Full=Xin actin-binding repeat-containing protein 2; AltName: Full=Beta-xin; AltName: Full=Cardiomyopathy-associated protein 3; AltName: Full=Myogenic MEF2-activated Xin-related protein; AltName: Full=Myomaxin; AltName: Full=mXinbeta) HSP 1 Score: 73.9442 bits (180), Expect = 4.735e-12 Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 0 Query: 180 CKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPK 239 C IC K Y +E L+A+K +HK+CFRC CS L+L Y S G I+CKPH ++LF+ K Sbjct: 3257 CIICQKTVYPMECLIADKQNFHKSCFRCHHCSSKLSLGNYASLHGRIYCKPHFKQLFKSK 3316
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Match: gi|20138067|sp|Q9UHB6.1|LIMA1_HUMAN (RecName: Full=LIM domain and actin-binding protein 1; AltName: Full=Epithelial protein lost in neoplasm) HSP 1 Score: 71.633 bits (174), Expect = 1.572e-11 Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0 Query: 179 TCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPK 239 TC C K Y +ERL+A + +H +CFRC C+ L+L TY S G I+CKPH +LF+ K Sbjct: 389 TCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 449
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Match: gi|443286779|sp|B0KYV5.1|LIMA1_PIG (RecName: Full=LIM domain and actin-binding protein 1; AltName: Full=Epithelial protein lost in neoplasm) HSP 1 Score: 70.8626 bits (172), Expect = 2.690e-11 Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0 Query: 179 TCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPK 239 TC C K Y +ERL+A + +H +CFRC C+ L+L TY S G I+CKPH +LF+ K Sbjct: 385 TCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 445
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Match: gi|75335735|sp|Q9M047.1|WLI2B_ARATH (RecName: Full=LIM domain-containing protein WLIM2b; AltName: Full=Widely-expressed LIM protein 2B) HSP 1 Score: 65.855 bits (159), Expect = 6.647e-11 Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = 0 Query: 180 CKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTE 259 CK C K Y VE L A+ +HK+CF+C C L L +Y S EGV++CKPH +LF+ + + AK +S+ E Sbjct: 10 CKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKESGSFNKNFQSPAKSADKSTPE 89
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Match: gi|341941022|sp|Q9ERG0.3|LIMA1_MOUSE (RecName: Full=LIM domain and actin-binding protein 1; AltName: Full=Epithelial protein lost in neoplasm; Short=mEPLIN) HSP 1 Score: 69.3218 bits (168), Expect = 9.611e-11 Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 0 Query: 179 TCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPK 239 +C C K Y +ERL+A + +H +CFRC C+ L+L TY S G I+CKPH +LF+ K Sbjct: 387 SCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 447
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Match: gi|75278879|sp|O80839.1|PLI2A_ARATH (RecName: Full=LIM domain-containing protein PLIM2a; AltName: Full=Pollen-expressed LIM protein 2; Short=AtPLIM2) HSP 1 Score: 64.6994 bits (156), Expect = 2.582e-10 Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0 Query: 180 CKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQ 237 CK C K YV++ L E + +HK+CFRC C L + Y S +GV++CKPH +LF+ Sbjct: 10 CKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPHFEQLFK 67 HSP 2 Score: 56.225 bits (134), Expect = 2.048e-7 Identity = 28/82 (34.15%), Postives = 41/82 (50.00%), Query Frame = 0 Query: 180 CKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDA 261 C C K Y +E++ E +HK CFRC L +Y S GV++CK H +LF K + + + A RR +S+ A Sbjct: 106 CATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRSASSGGA 187
BLAST of lim domain and actin-binding protein 1 vs. nr
Match: gi|1325261416|ref|XP_023330930.1| (glutamic acid-rich protein-like [Eurytemora affinis]) HSP 1 Score: 351.288 bits (900), Expect = 9.853e-108 Identity = 210/421 (49.88%), Postives = 274/421 (65.08%), Query Frame = 0 Query: 55 LEIQDPFPIKAKTTTQEPTPTVPKGDGIEEKVDKKEDGEN-----GERRKHHHKKHKKSRHIEKFEAFNKDKSNDPSREKSHRRKIHVRSKDPASIAKHLERSLNGGSSGGKSK--SGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKGGSDQAGLTPRVSTDRYGIMEKLKRLQEGEDLDDLLAEIDDEMPD-DPVAEEDPDEFGMTAMEKKTHKAEMMFTESGQDRRDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLLNSSANKVKKTRVDVRSENAKKFRDMFDKGEVPEGAA 467 +++ DPF + EP PT+ K DKK +G GE + K KKS+H +KFE F K + E+ +KIHVRSKDP+ IA+ E G + SGR P P +I CKICGKEPY+VER+VAEKSWWHKNCFRC C K LNLDTY SH+GVI+CKPHHRELFQPK V D+ E K S ED IERH+ Q RKMETIVREN P+ + V K+ D++K++GL+ LDVGSKF MFEKG S++ +V++DRYGIMEKLKRL+ GE ++DLLAEID+EMP E+D ++ G+T ++KK AE MF E R+++ QR++ELK+LR+ LM G ++ +LD F+++ S K+KKT++DVRSENAKKF MF+KGE+PEG + Sbjct: 83 IDLPDPF-------SSEPIPTI--------KPDKKINGTTDSNGVGEEEEKKKKHRKKSKHHDKFEKFRKLEEKGSKGEEFRSKKIHVRSKDPSKIARQFENGSKEKEKGPRKSYISGREAPKPKPVEIIKLCKICGKEPYLVERIVAEKSWWHKNCFRCTDCKKTLNLDTYSSHQGVIYCKPHHRELFQPKPVLMDLTEEIMKKNLDFSMEDPIERHRNQERKMETIVRENKPVSL-EGVVKS--RVDDSKWEGLDKLDVGSKFLMFEKGMSEER--EHKVASDRYGIMEKLKRLEAGEAVEDLLAEIDEEMPSMSEDEEDDDEDTGLTQVQKKAQNAEKMFVEDS--RKEKLQQQRKKELKNLRDRLMAGTRDSILDSFDEI---SHKKIKKTQIDVRSENAKKFMSMFNKGEIPEGIS 478
BLAST of lim domain and actin-binding protein 1 vs. nr
Match: gi|1285019248|ref|XP_023021857.1| (protein-methionine sulfoxide oxidase mical3a isoform X4 [Leptinotarsa decemlineata]) HSP 1 Score: 209.92 bits (533), Expect = 1.488e-54 Identity = 184/612 (30.07%), Postives = 310/612 (50.65%), Query Frame = 0 Query: 173 QPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKGGSDQAGL---TPRVSTDRY-GIMEKLKRLQE-GEDL---DDLLAEIDDEMPD-------DPVAEEDPDEFGMTAMEKK-----THKAEM--MFTESGQDRRDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLL---NSSANKVKKTRVDVRSENAKKFRDMFDKGEVPEGAANNADRVIKEKNHELEQMRKTKREQKEFFKKMEKGELDDPGSK-PSEPKLLVGK---------FKDKSNGEEG--------DQGDMELASLSNRFSFFENYKEKEVTKTKKKTFRMSPSHEGEDIEGD-----LTTEVEEVRRHTTERD--MARRDCKAGSVLKKFKEMEEKVLNGEDDVAEKRPMKRFTPPRKLGSETGSDYSDDEYSDSDSYTDSYTGSDYTDSDSESEEDETLKAIRATQRAKALRAKFEEWEHSQDAKEQERQMKLTDENG--SSLDTASHLKKRFEAL 732 QP T CK C K+ + +E++ AEK+ WHKNCFRC CSK L ++TY+SHEG ++CKPH + LF PK V+++ + PR RK E I+REN P+ DV +A D+ D + L++L+V +F++FE+ ++ T V+ R I+ KL + Q+ G D+ DD L I E D D EDP + ++K+ T+ +E+ + Q+ RD R ++R++E++ +R L +G + + + ++ + S AN +K +++ S + K ++ F+KGE D E++ E+ Q +K+ + F ELD SK P + + K + K+ E+ D +++ A + RF FFE YKE E ++KTFR++P + ++ D + + E VR T D +A++ +L KF++MEE+ L E + +PMK FTPP +L T ++ +D++ S S+ ++ G D D+ + E + L+A RA RA LRAKFE+WE + +E+ + + + +E G S +++ L+ RFE++ Sbjct: 8 QPLDTTNCKACSKQVFQMEQIKAEKAIWHKNCFRCTECSKQLTVETYVSHEGNLYCKPHFKSLFAPKAVEEE-----SPPR---------------PRKPELIIRENQPLELPPDVVRASDKPD-LGLEELQSLNVKERFQVFEQYQTETQETDRGTATVNVKRSPSILSKLAKFQQKGMDIGVSDDSLNGIPVEGSDTEEEAEEDVPEGEDPTLYKAKRVQKEKPFHFTNLSEVKNKWEHGEQNSRDERREERKQEIQSIRNKLFMGKQGKMKEAYQQAVMQSESCANLIKSEKIE--SYDTKSLKERFEKGETFNEKETKGD---DEEDTEVFQSEISKKSRSLFL------ELDANASKAPQMSNVTIPKQNVKTAREAYLAKTASEDTVKSSEIIEDIVEVKTADIQQRFKFFETYKEPE---KERKTFRITPPRDPSQVKTDTPEREIYHDPEVVRAEDTIDDSIIAKKTHTTSKMLNKFRQMEEENLTKEQEPLSPKPMKSFTPPPEL-PRTENESADEQDSGSEEESE---GQDQMDNQNLPE--DLLEARRAA-RATQLRAKFEKWEQQEIRREESQAVNIGEEGGDESQIESTRSLRARFESM 577
BLAST of lim domain and actin-binding protein 1 vs. nr
Match: gi|1285019242|ref|XP_023021853.1| (LIM domain and actin-binding protein 1 isoform X1 [Leptinotarsa decemlineata]) HSP 1 Score: 208.379 bits (529), Expect = 3.037e-53 Identity = 184/612 (30.07%), Postives = 310/612 (50.65%), Query Frame = 0 Query: 173 QPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKGGSDQAGL---TPRVSTDRY-GIMEKLKRLQE-GEDL---DDLLAEIDDEMPD-------DPVAEEDPDEFGMTAMEKK-----THKAEM--MFTESGQDRRDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLL---NSSANKVKKTRVDVRSENAKKFRDMFDKGEVPEGAANNADRVIKEKNHELEQMRKTKREQKEFFKKMEKGELDDPGSK-PSEPKLLVGK---------FKDKSNGEEG--------DQGDMELASLSNRFSFFENYKEKEVTKTKKKTFRMSPSHEGEDIEGD-----LTTEVEEVRRHTTERD--MARRDCKAGSVLKKFKEMEEKVLNGEDDVAEKRPMKRFTPPRKLGSETGSDYSDDEYSDSDSYTDSYTGSDYTDSDSESEEDETLKAIRATQRAKALRAKFEEWEHSQDAKEQERQMKLTDENG--SSLDTASHLKKRFEAL 732 QP T CK C K+ + +E++ AEK+ WHKNCFRC CSK L ++TY+SHEG ++CKPH + LF PK V+++ + PR RK E I+REN P+ DV +A D+ D + L++L+V +F++FE+ ++ T V+ R I+ KL + Q+ G D+ DD L I E D D EDP + ++K+ T+ +E+ + Q+ RD R ++R++E++ +R L +G + + + ++ + S AN +K +++ S + K ++ F+KGE D E++ E+ Q +K+ + F ELD SK P + + K + K+ E+ D +++ A + RF FFE YKE E ++KTFR++P + ++ D + + E VR T D +A++ +L KF++MEE+ L E + +PMK FTPP +L T ++ +D++ S S+ ++ G D D+ + E + L+A RA RA LRAKFE+WE + +E+ + + + +E G S +++ L+ RFE++ Sbjct: 8 QPLDTTNCKACSKQVFQMEQIKAEKAIWHKNCFRCTECSKQLTVETYVSHEGNLYCKPHFKSLFAPKAVEEE-----SPPR---------------PRKPELIIRENQPLELPPDVVRASDKPDLG-LEELQSLNVKERFQVFEQYQTETQETDRGTATVNVKRSPSILSKLAKFQQKGMDIGVSDDSLNGIPVEGSDTEEEAEEDVPEGEDPTLYKAKRVQKEKPFHFTNLSEVKNKWEHGEQNSRDERREERKQEIQSIRNKLFMGKQGKMKEAYQQAVMQSESCANLIKSEKIE--SYDTKSLKERFEKGETFNEKETKGD---DEEDTEVFQSEISKKSRSLFL------ELDANASKAPQMSNVTIPKQNVKTAREAYLAKTASEDTVKSSEIIEDIVEVKTADIQQRFKFFETYKEPE---KERKTFRITPPRDPSQVKTDTPEREIYHDPEVVRAEDTIDDSIIAKKTHTTSKMLNKFRQMEEENLTKEQEPLSPKPMKSFTPPPEL-PRTENESADEQDSGSEEESE---GQDQMDNQNLPE--DLLEARRAA-RATQLRAKFEKWEQQEIRREESQAVNIGEEGGDESQIESTRSLRARFESM 577 HSP 2 Score: 68.9366 bits (167), Expect = 3.728e-8 Identity = 23/63 (36.51%), Postives = 39/63 (61.90%), Query Frame = 0 Query: 174 PKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELF 236 P I C+ C + Y +E++ +HKNCF+C CS +L +D+Y ++G+++C PH + LF Sbjct: 599 PSITVLCESCDGKVYPLEKISVHGHVYHKNCFKCMECSCVLRMDSYSYNQGLLYCTPHFKRLF 661
BLAST of lim domain and actin-binding protein 1 vs. nr
Match: gi|1227959127|ref|XP_021930354.1| (LIM domain and actin-binding protein 1 isoform X20 [Zootermopsis nevadensis]) HSP 1 Score: 198.749 bits (504), Expect = 8.763e-49 Identity = 197/705 (27.94%), Postives = 315/705 (44.68%), Query Frame = 0 Query: 130 SHRRKIHVRSKDPASIAKHLERSLNGGSSGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKG----GSDQAGLTPRVSTDRY-GIMEKLKRLQ-EGEDLDDLLAEIDDEMPDDPVAEEDPDEFG--------------MTAMEKKTHKAEMMFT---------ESGQDR-RDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLLNSSANKVKKTRVDVRSENAKKFRDMFDKGEV-------PEGAA--NNADRVIKEKNHELEQMRKTKREQKEFFKKMEKGELDD-----PGSKPSEPKLLVGKFKDKS---------------NGEEGDQGDMELASLSNRFSFFENYKEKEVTKTKKKTFRMSPSHEGE----DIEGDLTTEVEEVRRH-TTERDMARRDCKAGSVLKKFKEMEEKVLNGEDDVAEKRPMKRFTPPRKLGSETGSDYSDDEYSDSDSYTDSYTGSDYTDSDSESEEDETLKAIRATQRAKALRAKFEEWEHSQDAKEQERQMKLTDENG--------------SSLDTASHLKKRFEALQLREEAESSGQQQQQPPKFRPKRF 756 S + +HVRS D A + K +S S + CK CGK+ + +E++ AE++ WHKNCFRCK C+K L +D Y SHEG ++CKPH RELF+PK V D+ E PR RK E I+REN PI +V +A D+ D + L +L+V S++++FEK G+D VS R I+ KL R Q +G D+ DD + P E + +K + + F+ E+GQ R+ + +R++E++++R L +G + + + +E + S N K V VRSE AK ++ F++GEV EG +++ + + E E ++ + F +++ + P + P + L V + +S + + + +E A +SN+F FFE YKE E ++K FR++P EG+ E ++ + E VR E D + A +L F++MEE + ED +P+KRFTPP ++ ++ ++E + + D S+ EDE LK + RAKALRAKFE WE ++ + G SS+DT L+ RFE+L+ S Q +++ P+ + RF Sbjct: 281 SKKTVLHVRSVDAAKVQKQFNQSAESASEQ-----------------TSNCKSCGKQVFQMEQVKAERAVWHKNCFRCKECNKQLTVDIYSSHEGQLYCKPHFRELFKPKAVVDEDFE---PPR---------------LRKPEMIIRENQPIELPPEVVRASDKPDLG-LEELSSLNVKSRYQVFEKSDSLSGADVERSPSSVSVKRSPSILSKLARFQAKGMDI----GVTDDSLNGIPYEESSTSSDEDEEIEAEEGEADRDLIRSSRKQRERPVSFSKMEDIKCRWETGQAAWREEQRQERKQEIQNIRSRLFLGKQGKMKEMYEQAVKDSENLTTKKEVGVRSEKAKSIKERFERGEVLPDDDAVEEGVVKDDHSKKAVDEDMSVFEA--GISKKSRSLFLELDATAAKNHHQQQPSASPLKSPLPVDDARRRSRETVLLRQPSEDVVRSSDFVEDVKVETAEVSNKFKFFETYKEPE---KQRKQFRITPPREGQVKANSPEREIYRDPEVVRSEDKVEDDEVMKTNTAKKMLSIFRQMEENA-SKEDIPDGPKPLKRFTPPPDYTRDSETESDEEEEEEEEEDVDPNIVRS-----SDKIEDEFLKQAQNDARAKALRAKFERWEEKENRANANAATNASHAVGNLNGSLDLDQSSEHSSIDTTKSLRARFESLR-----NESQQPKEKVPRPKVNRF 929
BLAST of lim domain and actin-binding protein 1 vs. nr
Match: gi|1227959129|ref|XP_021930364.1| (LIM domain and actin-binding protein 1 isoform X21 [Zootermopsis nevadensis] >gi|1227959131|ref|XP_021930372.1| LIM domain and actin-binding protein 1 isoform X21 [Zootermopsis nevadensis] >gi|1227959143|ref|XP_021930432.1| LIM domain and actin-binding protein 1 isoform X21 [Zootermopsis nevadensis]) HSP 1 Score: 198.749 bits (504), Expect = 8.960e-49 Identity = 197/705 (27.94%), Postives = 315/705 (44.68%), Query Frame = 0 Query: 130 SHRRKIHVRSKDPASIAKHLERSLNGGSSGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKG----GSDQAGLTPRVSTDRY-GIMEKLKRLQ-EGEDLDDLLAEIDDEMPDDPVAEEDPDEFG--------------MTAMEKKTHKAEMMFT---------ESGQDR-RDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLLNSSANKVKKTRVDVRSENAKKFRDMFDKGEV-------PEGAA--NNADRVIKEKNHELEQMRKTKREQKEFFKKMEKGELDD-----PGSKPSEPKLLVGKFKDKS---------------NGEEGDQGDMELASLSNRFSFFENYKEKEVTKTKKKTFRMSPSHEGE----DIEGDLTTEVEEVRRH-TTERDMARRDCKAGSVLKKFKEMEEKVLNGEDDVAEKRPMKRFTPPRKLGSETGSDYSDDEYSDSDSYTDSYTGSDYTDSDSESEEDETLKAIRATQRAKALRAKFEEWEHSQDAKEQERQMKLTDENG--------------SSLDTASHLKKRFEALQLREEAESSGQQQQQPPKFRPKRF 756 S + +HVRS D A + K +S S + CK CGK+ + +E++ AE++ WHKNCFRCK C+K L +D Y SHEG ++CKPH RELF+PK V D+ E PR RK E I+REN PI +V +A D+ D + L +L+V S++++FEK G+D VS R I+ KL R Q +G D+ DD + P E + +K + + F+ E+GQ R+ + +R++E++++R L +G + + + +E + S N K V VRSE AK ++ F++GEV EG +++ + + E E ++ + F +++ + P + P + L V + +S + + + +E A +SN+F FFE YKE E ++K FR++P EG+ E ++ + E VR E D + A +L F++MEE + ED +P+KRFTPP ++ ++ ++E + + D S+ EDE LK + RAKALRAKFE WE ++ + G SS+DT L+ RFE+L+ S Q +++ P+ + RF Sbjct: 269 SKKTVLHVRSVDAAKVQKQFNQSAESASEQ-----------------TSNCKSCGKQVFQMEQVKAERAVWHKNCFRCKECNKQLTVDIYSSHEGQLYCKPHFRELFKPKAVVDEDFE---PPR---------------LRKPEMIIRENQPIELPPEVVRASDKPDLG-LEELSSLNVKSRYQVFEKSDSLSGADVERSPSSVSVKRSPSILSKLARFQAKGMDI----GVTDDSLNGIPYEESSTSSDEDEEIEAEEGEADRDLIRSSRKQRERPVSFSKMEDIKCRWETGQAAWREEQRQERKQEIQNIRSRLFLGKQGKMKEMYEQAVKDSENLTTKKEVGVRSEKAKSIKERFERGEVLPDDDAVEEGVVKDDHSKKAVDEDMSVFEA--GISKKSRSLFLELDATAAKNHHQQQPSASPLKSPLPVDDARRRSRETVLLRQPSEDVVRSSDFVEDVKVETAEVSNKFKFFETYKEPE---KQRKQFRITPPREGQVKANSPEREIYRDPEVVRSEDKVEDDEVMKTNTAKKMLSIFRQMEENA-SKEDIPDGPKPLKRFTPPPDYTRDSETESDEEEEEEEEEDVDPNIVRS-----SDKIEDEFLKQAQNDARAKALRAKFERWEEKENRANANAATNASHAVGNLNGSLDLDQSSEHSSIDTTKSLRARFESLR-----NESQQPKEKVPRPKVNRF 917
BLAST of lim domain and actin-binding protein 1 vs. nr
Match: gi|1130241757|ref|XP_019763811.1| (PREDICTED: uncharacterized protein LOC109540075 isoform X2 [Dendroctonus ponderosae]) HSP 1 Score: 199.134 bits (505), Expect = 1.152e-48 Identity = 201/702 (28.63%), Postives = 335/702 (47.72%), Query Frame = 0 Query: 115 EAFNKDKSNDPS-REKSHRRKIHVRSKDPASIAKHLERSLNGGSSGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKGGSDQAGLT--PRVSTD---RYGIMEKLKRLQE--------GEDLDDL------------LAEIDDEMPD----DPVAEEDPDEFGMTAMEKKTHKAEMMFTESGQDRRDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLL---NSSANKVKKTRVDVRSENAKKFRDMFDKGEVPEGAANNADRVIKEKNHELEQMRKTKREQKEFFKKMEKGELDDPGSKPSE------PKLLVGKFKDK-----------SNGEEGDQGDMELASLSNRFSFFENYKEKEVTKTKKKTFRMSPSHEGEDI-----EGDLTTEVEEVR--RHTTERDMARRDCKAGSVLKKFKEMEEKVLNGEDDVAEKRPMKRFTPPRKLGSETGSDYSDDEYSDSDSYTDSYTGSDYTDSDSESEEDETLKAIRATQRAKALRAKFEEWEHSQDAKEQERQMKLTDENG---SSLDTASHLKKRFEALQLREEAESSGQQQQQPPKFRPKRF 756 E FN +N S R K+H+RK +K A K++ + S+ + K G I +++T CK C K+ + +E++ AEK+ WHKNCFRC CSK L +DTY S++G ++CKPH + LF PK V++D + P+ RK E I+REN P DVA+A D+ + + L++L+V +F++FE+ S Q + R +T+ I+ KL + Q+ E LD + ID E PD V +E P F TAM + E G R+ R ++ ++E++++R L +G +E + + ++ + SS+N K + + + K ++ F+KGEV A D+ + + E + ++ + F ELD SKP + PKL V K ++ + E+ ++ ++ A + +F FFE YKE E +KK FR++P + + E ++ + E VR + + ++A+ A +L KF++MEE L E + +P+KRFTPP E S E S+ + D T E + ++A +A RAK LRAKFE+WE ++ +EQ+ + + +E G S +++ L+ RFE Q+R+ + + + P+ +P RF Sbjct: 638 ERFNNAGTNASSCRSKNHQRK-SCFTKFDALQKKNVLHVRSSDSTKAQEKFSNGAQI----EVSTNCKSCSKQVFQMEQIKAEKAVWHKNCFRCSECSKQLTVDTYESNDGSLYCKPHFKALFAPKAVEED-----SSPK---------------PRKTELIIRENQPQELPPDVARASDKPN-LGLEELQSLNVKERFQVFEQYQSQQTESSDFERGATNVKRSPSILSKLAKFQKHGMDVGVSNEALDGIPIEESDDSEVEEEEAIDGEDPDLVRAKRVQKEKP--FHFTAMSDVKKRWEQ-----GDHAREERREETKQEIQNIRTKLFMGKQEKMKEAYQQAVMESESSSNLRKNLSEKIEACDTKSIKERFEKGEV---ANEKLDKENRNEEEEEVYESEISKKSRSLF-----LELDASASKPPQVSPVAAPKLEVKKAREAYLERTSKEDVVKSTEQIEEIEVRTADIQEKFKFFETYKEPE---QQKKQFRITPPRDASQVKTETPEREIYRDPEVVRAEEYIDDSNVAKESHTASKMLNKFRQMEEN-LTREPETQGPKPLKRFTPP----PEPARPESRSEEESSEYEEEDEDEVDQTGKLPE----DLIEAQKAA-RAKQLRAKFEKWEANEIKREQQNSVNIVEEFGEEQSQIESTRVLRARFE--QMRD----TSSEAPKSPRVKPNRF 1279 HSP 2 Score: 68.9366 bits (167), Expect = 4.600e-8 Identity = 22/58 (37.93%), Postives = 37/58 (63.79%), Query Frame = 0 Query: 179 TCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELF 236 TC C + Y E++ + +HKNCF+C CS +L +D+Y ++G+++C PH + LF Sbjct: 1289 TCHSCSDKVYPFEKISIHGNIYHKNCFKCMECSSVLRMDSYCYNQGLLYCTPHFKRLF 1346
BLAST of lim domain and actin-binding protein 1 vs. nr
Match: gi|1227959133|ref|XP_021930382.1| (LIM domain and actin-binding protein 1 isoform X22 [Zootermopsis nevadensis] >gi|1227959135|ref|XP_021930392.1| LIM domain and actin-binding protein 1 isoform X22 [Zootermopsis nevadensis] >gi|1227959137|ref|XP_021930402.1| LIM domain and actin-binding protein 1 isoform X22 [Zootermopsis nevadensis] >gi|1227959139|ref|XP_021930412.1| LIM domain and actin-binding protein 1 isoform X22 [Zootermopsis nevadensis] >gi|1227959141|ref|XP_021930422.1| LIM domain and actin-binding protein 1 isoform X22 [Zootermopsis nevadensis]) HSP 1 Score: 198.364 bits (503), Expect = 1.171e-48 Identity = 197/705 (27.94%), Postives = 315/705 (44.68%), Query Frame = 0 Query: 130 SHRRKIHVRSKDPASIAKHLERSLNGGSSGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKG----GSDQAGLTPRVSTDRY-GIMEKLKRLQ-EGEDLDDLLAEIDDEMPDDPVAEEDPDEFG--------------MTAMEKKTHKAEMMFT---------ESGQDR-RDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLLNSSANKVKKTRVDVRSENAKKFRDMFDKGEV-------PEGAA--NNADRVIKEKNHELEQMRKTKREQKEFFKKMEKGELDD-----PGSKPSEPKLLVGKFKDKS---------------NGEEGDQGDMELASLSNRFSFFENYKEKEVTKTKKKTFRMSPSHEGE----DIEGDLTTEVEEVRRH-TTERDMARRDCKAGSVLKKFKEMEEKVLNGEDDVAEKRPMKRFTPPRKLGSETGSDYSDDEYSDSDSYTDSYTGSDYTDSDSESEEDETLKAIRATQRAKALRAKFEEWEHSQDAKEQERQMKLTDENG--------------SSLDTASHLKKRFEALQLREEAESSGQQQQQPPKFRPKRF 756 S + +HVRS D A + K +S S + CK CGK+ + +E++ AE++ WHKNCFRCK C+K L +D Y SHEG ++CKPH RELF+PK V D+ E PR RK E I+REN PI +V +A D+ D + L +L+V S++++FEK G+D VS R I+ KL R Q +G D+ DD + P E + +K + + F+ E+GQ R+ + +R++E++++R L +G + + + +E + S N K V VRSE AK ++ F++GEV EG +++ + + E E ++ + F +++ + P + P + L V + +S + + + +E A +SN+F FFE YKE E ++K FR++P EG+ E ++ + E VR E D + A +L F++MEE + ED +P+KRFTPP ++ ++ ++E + + D S+ EDE LK + RAKALRAKFE WE ++ + G SS+DT L+ RFE+L+ S Q +++ P+ + RF Sbjct: 268 SKKTVLHVRSVDAAKVQKQFNQSAESASEQ-----------------TSNCKSCGKQVFQMEQVKAERAVWHKNCFRCKECNKQLTVDIYSSHEGQLYCKPHFRELFKPKAVVDEDFE---PPR---------------LRKPEMIIRENQPIELPPEVVRASDKPDLG-LEELSSLNVKSRYQVFEKSDSLSGADVERSPSSVSVKRSPSILSKLARFQAKGMDI----GVTDDSLNGIPYEESSTSSDEDEEIEAEEGEADRDLIRSSRKQRERPVSFSKMEDIKCRWETGQAAWREEQRQERKQEIQNIRSRLFLGKQGKMKEMYEQAVKDSENLTTKKEVGVRSEKAKSIKERFERGEVLPDDDAVEEGVVKDDHSKKAVDEDMSVFEA--GISKKSRSLFLELDATAAKNHHQQQPSASPLKSPLPVDDARRRSRETVLLRQPSEDVVRSSDFVEDVKVETAEVSNKFKFFETYKEPE---KQRKQFRITPPREGQVKANSPEREIYRDPEVVRSEDKVEDDEVMKTNTAKKMLSIFRQMEENA-SKEDIPDGPKPLKRFTPPPDYTRDSETESDEEEEEEEEEDVDPNIVRS-----SDKIEDEFLKQAQNDARAKALRAKFERWEEKENRANANAATNASHAVGNLNGSLDLDQSSEHSSIDTTKSLRARFESLR-----NESQQPKEKVPRPKVNRF 916
BLAST of lim domain and actin-binding protein 1 vs. nr
Match: gi|1227959113|ref|XP_021930290.1| (LIM domain and actin-binding protein 1 isoform X13 [Zootermopsis nevadensis]) HSP 1 Score: 198.749 bits (504), Expect = 1.264e-48 Identity = 203/732 (27.73%), Postives = 325/732 (44.40%), Query Frame = 0 Query: 103 KKHKKSRHIEKFEAFNKDKSNDPSREKSHRRKIHVRSKDPASIAKHLERSLNGGSSGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKG----GSDQAGLTPRVSTDRY-GIMEKLKRLQ-EGEDLDDLLAEIDDEMPDDPVAEEDPDEFG--------------MTAMEKKTHKAEMMFT---------ESGQDR-RDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLLNSSANKVKKTRVDVRSENAKKFRDMFDKGEV-------PEGAA--NNADRVIKEKNHELEQMRKTKREQKEFFKKMEKGELDD-----PGSKPSEPKLLVGKFKDKS---------------NGEEGDQGDMELASLSNRFSFFENYKEKEVTKTKKKTFRMSPSHEGE----DIEGDLTTEVEEVRRH-TTERDMARRDCKAGSVLKKFKEMEEKVLNGEDDVAEKRPMKRFTPPRKLGSETGSDYSDDEYSDSDSYTDSYTGSDYTDSDSESEEDETLKAIRATQRAKALRAKFEEWEHSQDAKEQERQMKLTDENG--------------SSLDTASHLKKRFEALQLREEAESSGQQQQQPPKFRPKRF 756 K+H+KS KF+ +K + +HVRS D A + K +S S + CK CGK+ + +E++ AE++ WHKNCFRCK C+K L +D Y SHEG ++CKPH RELF+PK V D+ E PR RK E I+REN PI +V +A D+ D + L +L+V S++++FEK G+D VS R I+ KL R Q +G D+ DD + P E + +K + + F+ E+GQ R+ + +R++E++++R L +G + + + +E + S N K V VRSE AK ++ F++GEV EG +++ + + E E ++ + F +++ + P + P + L V + +S + + + +E A +SN+F FFE YKE E ++K FR++P EG+ E ++ + E VR E D + A +L F++MEE + ED +P+KRFTPP ++ ++ ++E + + D S+ EDE LK + RAKALRAKFE WE ++ + G SS+DT L+ RFE+L+ S Q +++ P+ + RF Sbjct: 572 KRHQKS-SFSKFDQLSK------------KTVLHVRSVDAAKVQKQFNQSAESASEQ-----------------TSNCKSCGKQVFQMEQVKAERAVWHKNCFRCKECNKQLTVDIYSSHEGQLYCKPHFRELFKPKAVVDEDFE---PPR---------------LRKPEMIIRENQPIELPPEVVRASDKPD-LGLEELSSLNVKSRYQVFEKSDSLSGADVERSPSSVSVKRSPSILSKLARFQAKGMDI----GVTDDSLNGIPYEESSTSSDEDEEIEAEEGEADRDLIRSSRKQRERPVSFSKMEDIKCRWETGQAAWREEQRQERKQEIQNIRSRLFLGKQGKMKEMYEQAVKDSENLTTKKEVGVRSEKAKSIKERFERGEVLPDDDAVEEGVVKDDHSKKAVDEDMSVFEA--GISKKSRSLFLELDATAAKNHHQQQPSASPLKSPLPVDDARRRSRETVLLRQPSEDVVRSSDFVEDVKVETAEVSNKFKFFETYKEPE---KQRKQFRITPPREGQVKANSPEREIYRDPEVVRSEDKVEDDEVMKTNTAKKMLSIFRQMEENA-SKEDIPDGPKPLKRFTPPPDYTRDSETESDEEEEEEEEEDVDPNIVRS-----SDKIEDEFLKQAQNDARAKALRAKFERWEEKENRANANAATNASHAVGNLNGSLDLDQSSEHSSIDTTKSLRARFESLR-----NESQQPKEKVPRPKVNRF 1234
BLAST of lim domain and actin-binding protein 1 vs. nr
Match: gi|646722736|gb|KDR23628.1| (LIM domain and actin-binding protein 1 [Zootermopsis nevadensis]) HSP 1 Score: 197.978 bits (502), Expect = 1.876e-48 Identity = 197/705 (27.94%), Postives = 315/705 (44.68%), Query Frame = 0 Query: 130 SHRRKIHVRSKDPASIAKHLERSLNGGSSGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKG----GSDQAGLTPRVSTDRY-GIMEKLKRLQ-EGEDLDDLLAEIDDEMPDDPVAEEDPDEFG--------------MTAMEKKTHKAEMMFT---------ESGQDR-RDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLLNSSANKVKKTRVDVRSENAKKFRDMFDKGEV-------PEGAA--NNADRVIKEKNHELEQMRKTKREQKEFFKKMEKGELDD-----PGSKPSEPKLLVGKFKDKS---------------NGEEGDQGDMELASLSNRFSFFENYKEKEVTKTKKKTFRMSPSHEGE----DIEGDLTTEVEEVRRH-TTERDMARRDCKAGSVLKKFKEMEEKVLNGEDDVAEKRPMKRFTPPRKLGSETGSDYSDDEYSDSDSYTDSYTGSDYTDSDSESEEDETLKAIRATQRAKALRAKFEEWEHSQDAKEQERQMKLTDENG--------------SSLDTASHLKKRFEALQLREEAESSGQQQQQPPKFRPKRF 756 S + +HVRS D A + K +S S + CK CGK+ + +E++ AE++ WHKNCFRCK C+K L +D Y SHEG ++CKPH RELF+PK V D+ E PR RK E I+REN PI +V +A D+ D + L +L+V S++++FEK G+D VS R I+ KL R Q +G D+ DD + P E + +K + + F+ E+GQ R+ + +R++E++++R L +G + + + +E + S N K V VRSE AK ++ F++GEV EG +++ + + E E ++ + F +++ + P + P + L V + +S + + + +E A +SN+F FFE YKE E ++K FR++P EG+ E ++ + E VR E D + A +L F++MEE + ED +P+KRFTPP ++ ++ ++E + + D S+ EDE LK + RAKALRAKFE WE ++ + G SS+DT L+ RFE+L+ S Q +++ P+ + RF Sbjct: 524 SKKTVLHVRSVDAAKVQKQFNQSAESASEQ-----------------TSNCKSCGKQVFQMEQVKAERAVWHKNCFRCKECNKQLTVDIYSSHEGQLYCKPHFRELFKPKAVVDEDFE---PPR---------------LRKPEMIIRENQPIELPPEVVRASDKPD-LGLEELSSLNVKSRYQVFEKSDSLSGADVERSPSSVSVKRSPSILSKLARFQAKGMDI----GVTDDSLNGIPYEESSTSSDEDEEIEAEEGEADRDLIRSSRKQRERPVSFSKMEDIKCRWETGQAAWREEQRQERKQEIQNIRSRLFLGKQGKMKEMYEQAVKDSENLTTKKEVGVRSEKAKSIKERFERGEVLPDDDAVEEGVVKDDHSKKAVDEDMSVFEA--GISKKSRSLFLELDATAAKNHHQQQPSASPLKSPLPVDDARRRSRETVLLRQPSEDVVRSSDFVEDVKVETAEVSNKFKFFETYKEPE---KQRKQFRITPPREGQVKANSPEREIYRDPEVVRSEDKVEDDEVMKTNTAKKMLSIFRQMEENA-SKEDIPDGPKPLKRFTPPPDYTRDSETESDEEEEEEEEEDVDPNIVRS-----SDKIEDEFLKQAQNDARAKALRAKFERWEEKENRANANAATNASHAVGNLNGSLDLDQSSEHSSIDTTKSLRARFESLR-----NESQQPKEKVPRPKVNRF 1172
BLAST of lim domain and actin-binding protein 1 vs. nr
Match: gi|1227959123|ref|XP_021930335.1| (LIM domain and actin-binding protein 1 isoform X18 [Zootermopsis nevadensis]) HSP 1 Score: 197.593 bits (501), Expect = 2.405e-48 Identity = 197/705 (27.94%), Postives = 315/705 (44.68%), Query Frame = 0 Query: 130 SHRRKIHVRSKDPASIAKHLERSLNGGSSGGKSKSGRGRPIPPQPKINTTCKICGKEPYVVERLVAEKSWWHKNCFRCKTCSKLLNLDTYMSHEGVIFCKPHHRELFQPKVVKDDIIEVKAKPRRRSSTEDAIERHKEQARKMETIVRENDPIGHGDDVAKADDEGDEAKFKGLENLDVGSKFKMFEKG----GSDQAGLTPRVSTDRY-GIMEKLKRLQ-EGEDLDDLLAEIDDEMPDDPVAEEDPDEFG--------------MTAMEKKTHKAEMMFT---------ESGQDR-RDRRADQRRRELKDLRESLMVGNKEHVLDQFEDLLNSSANKVKKTRVDVRSENAKKFRDMFDKGEV-------PEGAA--NNADRVIKEKNHELEQMRKTKREQKEFFKKMEKGELDD-----PGSKPSEPKLLVGKFKDKS---------------NGEEGDQGDMELASLSNRFSFFENYKEKEVTKTKKKTFRMSPSHEGE----DIEGDLTTEVEEVRRH-TTERDMARRDCKAGSVLKKFKEMEEKVLNGEDDVAEKRPMKRFTPPRKLGSETGSDYSDDEYSDSDSYTDSYTGSDYTDSDSESEEDETLKAIRATQRAKALRAKFEEWEHSQDAKEQERQMKLTDENG--------------SSLDTASHLKKRFEALQLREEAESSGQQQQQPPKFRPKRF 756 S + +HVRS D A + K +S S + CK CGK+ + +E++ AE++ WHKNCFRCK C+K L +D Y SHEG ++CKPH RELF+PK V D+ E PR RK E I+REN PI +V +A D+ D + L +L+V S++++FEK G+D VS R I+ KL R Q +G D+ DD + P E + +K + + F+ E+GQ R+ + +R++E++++R L +G + + + +E + S N K V VRSE AK ++ F++GEV EG +++ + + E E ++ + F +++ + P + P + L V + +S + + + +E A +SN+F FFE YKE E ++K FR++P EG+ E ++ + E VR E D + A +L F++MEE + ED +P+KRFTPP ++ ++ ++E + + D S+ EDE LK + RAKALRAKFE WE ++ + G SS+DT L+ RFE+L+ S Q +++ P+ + RF Sbjct: 332 SKKTVLHVRSVDAAKVQKQFNQSAESASEQ-----------------TSNCKSCGKQVFQMEQVKAERAVWHKNCFRCKECNKQLTVDIYSSHEGQLYCKPHFRELFKPKAVVDEDFE---PPR---------------LRKPEMIIRENQPIELPPEVVRASDKPDLG-LEELSSLNVKSRYQVFEKSDSLSGADVERSPSSVSVKRSPSILSKLARFQAKGMDI----GVTDDSLNGIPYEESSTSSDEDEEIEAEEGEADRDLIRSSRKQRERPVSFSKMEDIKCRWETGQAAWREEQRQERKQEIQNIRSRLFLGKQGKMKEMYEQAVKDSENLTTKKEVGVRSEKAKSIKERFERGEVLPDDDAVEEGVVKDDHSKKAVDEDMSVFEA--GISKKSRSLFLELDATAAKNHHQQQPSASPLKSPLPVDDARRRSRETVLLRQPSEDVVRSSDFVEDVKVETAEVSNKFKFFETYKEPE---KQRKQFRITPPREGQVKANSPEREIYRDPEVVRSEDKVEDDEVMKTNTAKKMLSIFRQMEENA-SKEDIPDGPKPLKRFTPPPDYTRDSETESDEEEEEEEEEDVDPNIVRS-----SDKIEDEFLKQAQNDARAKALRAKFERWEEKENRANANAATNASHAVGNLNGSLDLDQSSEHSSIDTTKSLRARFESLR-----NESQQPKEKVPRPKVNRF 980 The following BLAST results are available for this feature:
BLAST of lim domain and actin-binding protein 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of lim domain and actin-binding protein 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of lim domain and actin-binding protein 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold299_size217019:185457..200985+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold299_size217019-snap-gene-1.31 ID=maker-scaffold299_size217019-snap-gene-1.31|Name=lim domain and actin-binding protein 1|organism=Tigriopus kingsejongensis|type=gene|length=15529bp|location=Sequence derived from alignment at scaffold299_size217019:185457..200985+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'lim domain and actin-binding protein 1' has the following synonyms
Add to Basket
|