GL12734, maker-scaffold303_size215788-snap-gene-1.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GL12734 vs. L. salmonis genes
Match: EMLSAG00000004716 (supercontig:LSalAtl2s:LSalAtl2s248:251011:269039:1 gene:EMLSAG00000004716 transcript:EMLSAT00000004716 description:"maker-LSalAtl2s248-augustus-gene-2.17") HSP 1 Score: 194.897 bits (494), Expect = 1.704e-59 Identity = 115/215 (53.49%), Postives = 147/215 (68.37%), Query Frame = 0 Query: 1 MAKLKYPPQGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPLQ-GPKMCTTLAMQGNLSGPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDFNNET------FVDHRCNVLDDLEPMNCKLYKYEKDKEGQPGLKDRCIQFDNNVISCMSGICKNVSMVYDCVYRSKLDDLIEDK-----DGRGFCNCNMCNNE 203 M K++YPPQGGEK LC TLFCTM+LSV+S VAIIY+IVIVYIP+ EL+S + KMCTTL+ GN+SG E CQ W SCEEWCLS CSHV+AAVR LGT + W C+ E F++H+CNVL DL +NCKL+ YEKD++ PG K+RCI+F N I+C +GIC+N+S VY ++S L DL + + G C+C +C E Sbjct: 1 MGKVQYPPQGGEKYLCFTLFCTMLLSVISCVAIIYAIVIVYIPSKIELESTIDPNSKMCTTLSKSGNISGLEDCQGWSSCEEWCLSVE---CSHVYAAVRNLGTEIDWINCEIPPENVTYSDEFINHKCNVLQDLPSLNCKLFPYEKDEDKNPGDKNRCIRFHNIQIACEAGICRNISSVYKSKFQSMLLDLEAKQPDSKSNKHGVCDCTLCPEE 212
BLAST of GL12734 vs. L. salmonis genes
Match: EMLSAG00000000269 (supercontig:LSalAtl2s:LSalAtl2s1041:19329:29949:-1 gene:EMLSAG00000000269 transcript:EMLSAT00000000269 description:"maker-LSalAtl2s1041-augustus-gene-0.32") HSP 1 Score: 173.326 bits (438), Expect = 8.497e-52 Identity = 107/198 (54.04%), Postives = 128/198 (64.65%), Query Frame = 0 Query: 1 MAKLKYPPQGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPLQ-GPKMCTTLAMQGNLSGPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCD--FNNE-----TFVDHRCNVLDDLEPMNCKLYKYEKDKEGQPGLKDRCIQFDNNVISCMSGICKNVSMVYDCVYRSKLDDLIEDKD 190 M K KYPPQGGEK LC TLFCTM+LSV+SAVAIIYSIVI+YIP+ L+S + KMCTTL+ NLSG ++C W SCEEWCLSKS K CSHVWAA R LGT + W CD ++NE TFV+HR G G K+RCI+F+N ISC +GICKN++ VY C ++SKL DL D Sbjct: 1 MPKTKYPPQGGEKHLCFTLFCTMLLSVISAVAIIYSIVIIYIPSKTVLESTIALDSKMCTTLSNDRNLSGIDTCAGWSSCEEWCLSKSNKECSHVWAAARNLGTEIDWTDCDIIYDNEEESLDTFVNHRYT-------------------NGNTGDKNRCIRFNNIQISCEAGICKNITAVYKCDFQSKLLDLSAKGD 179
BLAST of GL12734 vs. nr
Match: gi|1325288552|ref|XP_023329044.1| (uncharacterized protein LOC111701831 [Eurytemora affinis]) HSP 1 Score: 185.652 bits (470), Expect = 6.647e-52 Identity = 102/211 (48.34%), Postives = 130/211 (61.61%), Query Frame = 0 Query: 1 MAKLKYPPQGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPLQGPKMCTTLAMQGNLSG-PE-SCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDFNNETFVDHRCNVLDDLEPMNCKLYKYEKDKEGQPGLKDRCIQFDNNVISCMSGICKNVSMVYDCVYRSKLDDLIED--KDGR---GFCNCNMCNNEN 204 M K K PPQGGEK LCL +F T+M SV+ V +IYS VI+Y P+ +E+ + GPK CTT +Q N++G PE W SCEEWCLSK CS V+ +R+ G + W+GC F DH C L DLEPMNCK K+E ++ G K+ C QFD +VISC G CKNVSM+Y C ++ L+DL K+G G+CNCN C N Sbjct: 1 MPKPKLPPQGGEKWLCLGMFLTIMFSVVMVVTLIYSTVIIYKPSFEEMSKNIIGPKRCTTTLVQRNITGTPEDGICAWSSCEEWCLSKGASPCSKVFGVLRDRGADMTWEGCTLEEPWFFDHVCTTLADLEPMNCKRSKWEIERNGS---KEICKQFD-DVISCEMGECKNVSMIYSCTFQDTLEDLKMSWGKEGYVTDGYCNCNQCPESN 207
BLAST of GL12734 vs. nr
Match: gi|1325256706|ref|XP_023322370.1| (uncharacterized protein LOC111696850 [Eurytemora affinis]) HSP 1 Score: 181.03 bits (458), Expect = 2.650e-50 Identity = 105/209 (50.24%), Postives = 138/209 (66.03%), Query Frame = 0 Query: 1 MAKLKYPPQGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPLQGPKMCTTLAMQGNLS---GPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDFNNE-TFVDHRCNVLDDLEPMNCKLYKYEKDKEGQPGLKDRCIQFDNNVISCMSGICKNVSMVYDCVYRSKLDDLI-EDKDGRGFCNCNMCNNEN 204 MAKLK PPQGGEK LC+ F MM SVL V++IY IVI+YIP+++ELQ+ QGPK CTT ++ N++ G +C +W SCEEWCLS+ CS ++ +RE+G +V ++ CD E FVDH C LDDLE +NCK K E + PG ++ C+ F N +ISC G CKNVS +YDC+Y+ DL+ + KD GFCNCN C N Sbjct: 1 MAKLKLPPQGGEKWLCIFTFLFMMFSVLCTVSVIYCIVIIYIPSMEELQTDFQGPKRCTTSLVERNITSVPGDGNC-DWASCEEWCLSQGSSPCSKMYGILREIGASVTYEQCDLEPEGGFVDHLCTTLDDLEAVNCKRSKREPE---NPGNRELCVNF-NTMISCEKGYCKNVSRIYDCIYKDMYQDLLNKTKDSDGFCNCNRCTTSN 204
BLAST of GL12734 vs. nr
Match: gi|1325309403|ref|XP_023336324.1| (uncharacterized protein LOC111707445 [Eurytemora affinis]) HSP 1 Score: 85.8853 bits (211), Expect = 3.497e-16 Identity = 60/170 (35.29%), Postives = 84/170 (49.41%), Query Frame = 0 Query: 15 LCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPL-QGPKMCTTLAMQGNLSGPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDFNNETFVDHRCNVLDD--LEPMNCKLYKYEKDKEGQPGLKDRCIQFDNNVISCMSGICKNVSMVYDCVYRSK 181 +C TL L+VLS+V+IIY VIVY+PA EL+S + + P MCTT+ + E+C SC EWCL K C + AVRE GT V ++GC C +LD NCK ++C Q N + C G+C N+S V+ C ++ + Sbjct: 20 ICGTLCICQGLAVLSSVSIIYLSVIVYLPAKRELESGIGETPVMCTTVERRKKEHYSEACTSS-SCTEWCLGKGSGPCDQIHVAVRENGTDVDFEGCS----NVFRKECPILDSNTASEHNCK-------------KNNQCTQL-NGLFICQEGLCTNISEVFSCTWKRE 170
BLAST of GL12734 vs. nr
Match: gi|1022774745|gb|KZS18727.1| (Uncharacterized protein APZ42_015269 [Daphnia magna]) HSP 1 Score: 79.337 bits (194), Expect = 1.521e-13 Identity = 57/179 (31.84%), Postives = 90/179 (50.28%), Query Frame = 0 Query: 1 MAK--LKYPPQGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPLQG-PKMCTTLAMQGNLSGPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDFNNETFVDHRCNVLDDLEPMNCKLYKYEKDKEGQPGLKDRCIQFDNNVISCMSGICKNVSMVYDC 176 MAK +K P E +C +F +++VLSAV+I+Y V Y+P++ + S + P +CTT ++ E+C W SC EWCL+KS C +W +VR+ GT + +D C + V+ C +DL P + L + KD+C + +C G+C NV+ C Sbjct: 1 MAKRPVKKPEYPEESRICGLIFIFQLIAVLSAVSIVYLTVASYVPSIKAIASTYEEFPVICTTTLADDSV---ENC-TWLSCFEWCLTKSSGLCMQIWVSVRQNGTELAFDQC----QNQVEKSCTT-EDLIPTHRHLCR-----------KDQCENLL-GLFNCTKGVCVNVTSAMTC 158
BLAST of GL12734 vs. nr
Match: gi|1229891873|ref|XP_022166394.1| (uncharacterized protein LOC111030955 [Myzus persicae]) HSP 1 Score: 77.411 bits (189), Expect = 6.335e-13 Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 0 Query: 4 LKYPPQGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPL-QGPKMCTTLAMQGNLSGPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDFNNETFVDHRCNVLDDLEPMNCKLYKYEKDKEGQPGLKDRCIQFDNNVISCMSGICKNVSMVYDCVYRS 180 L PPQ + +C T+ M +VLS+VAI+Y V +Y+P + E +S + + P +CTT N+S + C +W SC EWCLSK C+ ++ +R+ G+ + C V+ C D P N K Y ++D C +C G+C N++ + C +R+ Sbjct: 12 LVVPPQ--DTRICGTICVCQMTAVLSSVAIVYLTVAIYMPTMREFKSGISEDPVVCTTTR---NVSS-QKC-DWSSCSEWCLSKPSGGCAQIYVNIRQNGSALLLHNCSH----VVNKTCFGFD---PENAKRYTC---------IRDECKTL-TGTFNCTDGVCINITDAFRCEFRN 165
BLAST of GL12734 vs. nr
Match: gi|328723608|ref|XP_003247891.1| (PREDICTED: uncharacterized protein LOC100568512 [Acyrthosiphon pisum]) HSP 1 Score: 77.411 bits (189), Expect = 6.457e-13 Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 0 Query: 4 LKYPPQGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPL-QGPKMCTTLAMQGNLSGPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDFNNETFVDHRCNVLDDLEPMNCKLYKYEKDKEGQPGLKDRCIQFDNNVISCMSGICKNVSMVYDCVYRS 180 L PPQ + +C T+ M +VLS+VAI+Y V +Y+P + E +S + + P +CTT N+S + C +W SC EWCLSK C+ ++ +R+ G+ + C V+ C D P N K Y ++D C +C G+C N++ + C +R+ Sbjct: 12 LVVPPQ--DTRICGTICVCQMTAVLSSVAIVYLTVAIYMPTMREFKSGISEDPVVCTTTR---NVSS-QKC-DWSSCSEWCLSKPSGGCAQIYVNIRQNGSALLLHNCSH----VVNKTCFGFD---PENAKRYTC---------IRDECKTL-TGTFNCTEGVCINITDAFRCEFRN 165
BLAST of GL12734 vs. nr
Match: gi|1130247594|ref|XP_019765485.1| (PREDICTED: uncharacterized protein LOC109541156 [Dendroctonus ponderosae]) HSP 1 Score: 77.411 bits (189), Expect = 6.919e-13 Identity = 56/181 (30.94%), Postives = 87/181 (48.07%), Query Frame = 0 Query: 4 LKYPPQGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPL-QGPKMCTTLAMQGNLSGPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDFNNETFVDHRCNVLDDLEPMNCKLYKYEKDKEGQPGLKDRCIQFD----NNVISCMSGICKNVSMVYDCVYR 179 L PPQ + +C T+ M VLS+VAI+Y V +Y+P+ LQS + + P MCTT+ E+C +W SC EWCLSK+ SC ++ +R G+ + C + F Y KD+E K+RCI + +C +G C +++ ++CVY+ Sbjct: 12 LVIPPQ--DTRICGTICLCQMTLVLSSVAIVYLTVAIYVPSTRALQSGISEHPVMCTTVRALT----VETC-DWGSCGEWCLSKTSGSCIQIYVNLRRNGSNLLLANCTNIAQKFC-------------------YGKDQE--VAKKNRCIADECKNLTGTFNCTTGTCIDITDSFECVYK 164
BLAST of GL12734 vs. nr
Match: gi|1163529207|gb|ARA68392.1| (TEH3 [Rhopalosiphum padi]) HSP 1 Score: 77.411 bits (189), Expect = 6.927e-13 Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 0 Query: 4 LKYPPQGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPL-QGPKMCTTLAMQGNLSGPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDFNNETFVDHRCNVLDDLEPMNCKLYKYEKDKEGQPGLKDRCIQFDNNVISCMSGICKNVSMVYDCVYRS 180 L PPQ + +C T+ M +VLS+VAI+Y V +Y+P + E +S + + P +CTT N+S + C +W SC EWCLSK C+ ++ +R+ G+ + C V+ C D P N K Y ++D C +C G+C N++ + C +R+ Sbjct: 12 LVVPPQ--DTRICGTICVCQMTAVLSSVAIVYLTVAIYMPTMREFKSGISEDPVVCTTTR---NVSS-QKC-DWSSCSEWCLSKPSGGCAQIYVNIRQNGSALLLHNCSH----VVNKTCFGFD---PENAKRYTC---------IRDECKTL-TGTFNCTDGVCINITDAFRCEFRN 165
BLAST of GL12734 vs. nr
Match: gi|985418986|ref|XP_015374977.1| (PREDICTED: uncharacterized protein LOC107169677 [Diuraphis noxia]) HSP 1 Score: 77.411 bits (189), Expect = 7.161e-13 Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 0 Query: 4 LKYPPQGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSPL-QGPKMCTTLAMQGNLSGPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDFNNETFVDHRCNVLDDLEPMNCKLYKYEKDKEGQPGLKDRCIQFDNNVISCMSGICKNVSMVYDCVYRS 180 L PPQ + +C T+ M +VLS+VAI+Y V +Y+P + E +S + + P +CTT N+S + C +W SC EWCLSK C+ ++ +R+ G+ + C V+ C D P N K Y ++D C +C G+C N++ + C +R+ Sbjct: 12 LVVPPQ--DTRICGTICVCQMTAVLSSVAIVYLTVAIYMPTMREFKSGISEDPVVCTTTR---NVSS-QKC-DWSSCSEWCLSKPSGGCAQIYVNIRQNGSALLLHNCSH----VVNKTCFGFD---PENAKRYTC---------IRDECKTL-TGTFNCTDGVCINITDAFRCEFRN 165
BLAST of GL12734 vs. nr
Match: gi|1325288377|ref|XP_023328949.1| (uncharacterized protein LOC111701769 [Eurytemora affinis]) HSP 1 Score: 72.7886 bits (177), Expect = 7.590e-13 Identity = 51/134 (38.06%), Postives = 73/134 (54.48%), Query Frame = 0 Query: 9 QGGEKSLCLTLFCTMMLSVLSAVAIIYSIVIVYIPALDELQSP-LQGPKMCTTLAMQGNLSGPESCQEWWSCEEWCLSKSGKSCSHVWAAVRELGTTVYWDGCDF--------NNETFVDH-RCNVLDDLEPMN 132 + E+++C L M ++VLS+V+++Y IVY+PA EL+S L P MCTT+ N + C W SC EWCLSK C+ V A VR+ GT + W C ++E V+ CN D+ EP+N Sbjct: 2 EAPERAVCCGLCLCMAVAVLSSVSLVYLTAIVYMPAKRELESGLLDQPAMCTTV----NSLHTDHCA-WASCFEWCLSKPN-FCTQVHAEVRKNGTNIVWKDCSLISDTVCPVSDEDLVERITCNNEDECEPVN 129 The following BLAST results are available for this feature:
BLAST of GL12734 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of GL12734 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of GL12734 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold303_size215788:174619..181250- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold303_size215788-snap-gene-1.14 ID=maker-scaffold303_size215788-snap-gene-1.14|Name=GL12734|organism=Tigriopus kingsejongensis|type=gene|length=6632bp|location=Sequence derived from alignment at scaffold303_size215788:174619..181250- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GL12734' has the following synonyms
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