pre-mrna-processing-splicing factor 8, maker-scaffold3155_size9965-snap-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of pre-mrna-processing-splicing factor 8 vs. L. salmonis genes
Match: EMLSAG00000006337 (supercontig:LSalAtl2s:LSalAtl2s346:204870:208506:1 gene:EMLSAG00000006337 transcript:EMLSAT00000006337 description:"augustus_masked-LSalAtl2s346-processed-gene-2.2") HSP 1 Score: 195.667 bits (496), Expect = 1.645e-61 Identity = 93/151 (61.59%), Postives = 112/151 (74.17%), Query Frame = 0 Query: 69 VKVNKWDGSAVKNALDDAVKEILINKPQFEEDHGLMDARLLIGGVAVAVSMFALLWDYLHPFPTSKPVLIGCVGTYFVLMGVLTFYTTYMEKGIFVVALEKDPSGLDPPCKWEASSHMKKFDDVYSLTVSVEDGKTKKTRDASFTRSCGDF 219 VK+ KWDG AVKNALDD V+E+L +K + ED L D RL+I AVA +MFALLWD+L+PFP S+P+LI CVGTYF LM V T YTTY KGIFVV ++KDP+GLDP C+WEASS+MKKFDD+Y LT++ DG KK R SC F Sbjct: 9 VKICKWDGIAVKNALDDGVREVLTSKLPYSEDFSLSDGRLIICATAVAXAMFALLWDFLYPFPLSRPILIFCVGTYFFLMIVFTLYTTYKIKGIFVVVIQKDPAGLDPDCRWEASSNMKKFDDMYELTLAFIDGNNKKKRVFFQLISCKFF 159
BLAST of pre-mrna-processing-splicing factor 8 vs. L. salmonis genes
Match: EMLSAG00000004392 (supercontig:LSalAtl2s:LSalAtl2s230:287889:295493:-1 gene:EMLSAG00000004392 transcript:EMLSAT00000004392 description:"maker-LSalAtl2s230-snap-gene-3.13") HSP 1 Score: 185.267 bits (469), Expect = 3.156e-51 Identity = 97/157 (61.78%), Postives = 108/157 (68.79%), Query Frame = 0 Query: 276 NKFPAL--REASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 N+ P L ++ ST S VMSEH WDG+KTIVITCS TPGSCSLTAYKL PSGFEWGK NTDKGN PKGYLPSHYEKVQMLLSDR L F+ + EL L NPKEFYHEVHRP+HF+NFAS E +G D GADR+ + Sbjct: 2215 NELPQLSPQDISTH---SRVMSEHTSWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKNNTDKGNXPKGYLPSHYEKVQMLLSDRSLPFYEI---------------------ELSLANPKEFYHEVHRPSHFMNFASFE-EGVDWNGADREDML 2346
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Match: gi|67460824|sp|Q6P2Q9.2|PRP8_HUMAN (RecName: Full=Pre-mRNA-processing-splicing factor 8; AltName: Full=220 kDa U5 snRNP-specific protein; AltName: Full=PRP8 homolog; AltName: Full=Splicing factor Prp8; AltName: Full=p220) HSP 1 Score: 234.187 bits (596), Expect = 1.143e-66 Identity = 103/140 (73.57%), Postives = 123/140 (87.86%), Query Frame = 0 Query: 291 SNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 + +M+++ WDG+KTI+ITCS TPGSC+LTAYKL PSG+EWG+QNTDKGNNPKGYLPSHYE+VQMLLSDRFLGFFMVP+Q SWNYNFMGVRH+ +MKYEL L NPKEFYHEVHRP+HFLNFA L++ + ADR+ L+ Sbjct: 2197 AKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLY 2334
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Match: gi|269849633|sp|Q99PV0.2|PRP8_MOUSE (RecName: Full=Pre-mRNA-processing-splicing factor 8; AltName: Full=Splicing factor Prp8) HSP 1 Score: 234.187 bits (596), Expect = 1.143e-66 Identity = 103/140 (73.57%), Postives = 123/140 (87.86%), Query Frame = 0 Query: 291 SNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 + +M+++ WDG+KTI+ITCS TPGSC+LTAYKL PSG+EWG+QNTDKGNNPKGYLPSHYE+VQMLLSDRFLGFFMVP+Q SWNYNFMGVRH+ +MKYEL L NPKEFYHEVHRP+HFLNFA L++ + ADR+ L+ Sbjct: 2197 AKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLY 2334
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Match: gi|73919436|sp|Q5BJI9.1|SPCS2_DANRE (RecName: Full=Probable signal peptidase complex subunit 2; AltName: Full=Microsomal signal peptidase 25 kDa subunit; Short=SPase 25 kDa subunit) HSP 1 Score: 204.912 bits (520), Expect = 5.876e-63 Identity = 95/179 (53.07%), Postives = 130/179 (72.63%), Query Frame = 0 Query: 69 VKVNKWDGSAVKNALDDAVKEILINKPQFEEDHGLMDARLLIGGVAVAVSMFALLWDYLHPFPTSKPVLIGCVGTYFVLMGVLTFYTTYMEKGIFVVALEKDPSGLDPPCKWEASSHMKKFDDVYSLTVSVEDGKTKKTRDASFTRSCGDFVDENGLVCLELVEKAVNKIKSTLEGVKK 247 VK++KWDG+AVKN+LDDA K++LI K + E L+D RL I V+ ++ AL+WDYLHPFP SKPVL CV +YF++MG+LT YT+Y EK IF+VA++KDP+G+DP W SS +K+FDD Y+L +S DGKTK++R+ FT+S F DENG + ++ EK V+K+ TL KK Sbjct: 21 VKIDKWDGAAVKNSLDDAAKKVLIEKYGYLESFNLVDGRLFICTVSCLFTIVALIWDYLHPFPESKPVLACCVVSYFIMMGILTLYTSYKEKNIFLVAMQKDPAGMDPDHSWCLSSSLKRFDDQYTLRMSFTDGKTKQSRETEFTKSVSVFFDENGTLVMDQYEKYVSKLHDTLATEKK 199
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Match: gi|73919440|sp|Q5M8Y1.1|SPCS2_XENTR (RecName: Full=Probable signal peptidase complex subunit 2; AltName: Full=Microsomal signal peptidase 25 kDa subunit; Short=SPase 25 kDa subunit) HSP 1 Score: 199.134 bits (505), Expect = 8.016e-61 Identity = 95/185 (51.35%), Postives = 133/185 (71.89%), Query Frame = 0 Query: 63 EDQPEVVKVNKWDGSAVKNALDDAVKEILINKPQFEEDHGLMDARLLIGGVAVAVSMFALLWDYLHPFPTSKPVLIGCVGTYFVLMGVLTFYTTYMEKGIFVVALEKDPSGLDPPCKWEASSHMKKFDDVYSLTVSVEDGKTKKTRDASFTRSCGDFVDENGLVCLELVEKAVNKIKSTLEGVKK 247 +D+P VK++KWDGSAVKN+LDDA K++L+ K ++ E+ L+D RL+I ++ ++ AL+WDYLHPFP SKPVL CV +YF++MG+LT YT+Y EK IF+VA KDP+G+DP W SS +K+FDD Y+L V+ GKTK RDA FT+S F D+NG + ++L E V+K+ +L KK Sbjct: 17 DDKP--VKIDKWDGSAVKNSLDDAAKKVLLEKYRYVENFCLIDGRLIICTISCVFAIVALVWDYLHPFPESKPVLAICVISYFLMMGILTIYTSYKEKSIFLVAHRKDPAGMDPDDIWHLSSSLKRFDDKYTLKVTYISGKTKAQRDAEFTKSIARFFDDNGTLVMDLFEPEVSKLHDSLAMEKK 199
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Match: gi|20140233|sp|Q9CYN2.1|SPCS2_MOUSE (RecName: Full=Signal peptidase complex subunit 2; AltName: Full=Microsomal signal peptidase 25 kDa subunit; Short=SPase 25 kDa subunit) HSP 1 Score: 193.356 bits (490), Expect = 3.347e-58 Identity = 87/185 (47.03%), Postives = 133/185 (71.89%), Query Frame = 0 Query: 63 EDQPEVVKVNKWDGSAVKNALDDAVKEILINKPQFEEDHGLMDARLLIGGVAVAVSMFALLWDYLHPFPTSKPVLIGCVGTYFVLMGVLTFYTTYMEKGIFVVALEKDPSGLDPPCKWEASSHMKKFDDVYSLTVSVEDGKTKKTRDASFTRSCGDFVDENGLVCLELVEKAVNKIKSTLEGVKK 247 +D+P VK++KWDGSAVKN+LDD+ K++L+ K ++ E+ GL+D RL I ++ ++ AL+WDY+HPFP SKPVL CV +YFV+MG+LT YT+Y EK IF+VA KDP+G+DP W+ SS +K+FDD Y+L ++ G+TK+ R+A FT+S F D +G + ++ E ++++ +L +K Sbjct: 42 DDKP--VKIDKWDGSAVKNSLDDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERK 224
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Match: gi|3183167|sp|Q28250.1|SPCS2_CANFA (RecName: Full=Signal peptidase complex subunit 2; AltName: Full=Microsomal signal peptidase 25 kDa subunit; Short=SPase 25 kDa subunit) HSP 1 Score: 192.971 bits (489), Expect = 5.079e-58 Identity = 87/185 (47.03%), Postives = 133/185 (71.89%), Query Frame = 0 Query: 63 EDQPEVVKVNKWDGSAVKNALDDAVKEILINKPQFEEDHGLMDARLLIGGVAVAVSMFALLWDYLHPFPTSKPVLIGCVGTYFVLMGVLTFYTTYMEKGIFVVALEKDPSGLDPPCKWEASSHMKKFDDVYSLTVSVEDGKTKKTRDASFTRSCGDFVDENGLVCLELVEKAVNKIKSTLEGVKK 247 +D+P VK++KWDGSAVKN+LDD+ K++L+ K ++ E+ GL+D RL I ++ ++ AL+WDY+HPFP SKPVL CV +YFV+MG+LT YT+Y EK IF+VA KDP+G+DP W+ SS +K+FDD Y+L ++ G+TK+ R+A FT+S F D +G + ++ E ++++ +L +K Sbjct: 42 DDKP--VKIDKWDGSAVKNSLDDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERK 224
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Match: gi|73919438|sp|Q4R512.1|SPCS2_MACFA (RecName: Full=Signal peptidase complex subunit 2; AltName: Full=Microsomal signal peptidase 25 kDa subunit; Short=SPase 25 kDa subunit) HSP 1 Score: 191.815 bits (486), Expect = 1.133e-57 Identity = 87/185 (47.03%), Postives = 133/185 (71.89%), Query Frame = 0 Query: 63 EDQPEVVKVNKWDGSAVKNALDDAVKEILINKPQFEEDHGLMDARLLIGGVAVAVSMFALLWDYLHPFPTSKPVLIGCVGTYFVLMGVLTFYTTYMEKGIFVVALEKDPSGLDPPCKWEASSHMKKFDDVYSLTVSVEDGKTKKTRDASFTRSCGDFVDENGLVCLELVEKAVNKIKSTLEGVKK 247 +D+P VK++KWDGSAVKN+LDD+ K++L+ K ++ E+ GL+D RL I ++ ++ AL+WDY+HPFP SKPVL CV +YFV+MG+LT YT+Y EK IF+VA KDP+G+DP W+ SS +K+FDD Y+L ++ G+TK+ R+A FT+S F D +G + ++ E ++++ +L +K Sbjct: 42 DDKP--VKIDKWDGSAVKNSLDDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLAVERK 224
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Match: gi|73919439|sp|Q5RAY6.1|SPCS2_PONAB (RecName: Full=Signal peptidase complex subunit 2; AltName: Full=Microsomal signal peptidase 25 kDa subunit; Short=SPase 25 kDa subunit) HSP 1 Score: 191.815 bits (486), Expect = 1.195e-57 Identity = 86/180 (47.78%), Postives = 131/180 (72.78%), Query Frame = 0 Query: 63 EDQPEVVKVNKWDGSAVKNALDDAVKEILINKPQFEEDHGLMDARLLIGGVAVAVSMFALLWDYLHPFPTSKPVLIGCVGTYFVLMGVLTFYTTYMEKGIFVVALEKDPSGLDPPCKWEASSHMKKFDDVYSLTVSVEDGKTKKTRDASFTRSCGDFVDENGLVCLELVEKAVNKIKSTL 242 +D+P VK++KWDGSAVKN+LDD+ K++L+ K ++ E+ GL+D RL I ++ ++ AL+WDY+HPFP SKPVL CV +YFV+MG+LT YT+Y EK IF+VA KDP+G+DP W+ SS +K+FDD Y+L ++ G+TK+ R+A FT+S F D +G + ++ E ++++ +L Sbjct: 42 DDKP--VKIDKWDGSAVKNSLDDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSL 219
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Match: gi|6648110|sp|Q15005.3|SPCS2_HUMAN (RecName: Full=Signal peptidase complex subunit 2; AltName: Full=Microsomal signal peptidase 25 kDa subunit; Short=SPase 25 kDa subunit) HSP 1 Score: 191.815 bits (486), Expect = 1.315e-57 Identity = 86/180 (47.78%), Postives = 131/180 (72.78%), Query Frame = 0 Query: 63 EDQPEVVKVNKWDGSAVKNALDDAVKEILINKPQFEEDHGLMDARLLIGGVAVAVSMFALLWDYLHPFPTSKPVLIGCVGTYFVLMGVLTFYTTYMEKGIFVVALEKDPSGLDPPCKWEASSHMKKFDDVYSLTVSVEDGKTKKTRDASFTRSCGDFVDENGLVCLELVEKAVNKIKSTL 242 +D+P VK++KWDGSAVKN+LDD+ K++L+ K ++ E+ GL+D RL I ++ ++ AL+WDY+HPFP SKPVL CV +YFV+MG+LT YT+Y EK IF+VA KDP+G+DP W+ SS +K+FDD Y+L ++ G+TK+ R+A FT+S F D +G + ++ E ++++ +L Sbjct: 42 DDKP--VKIDKWDGSAVKNSLDDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSL 219
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Match: gi|20140346|sp|Q9VYY2.1|SPCS2_DROME (RecName: Full=Signal peptidase complex subunit 2; AltName: Full=Microsomal signal peptidase 25 kDa subunit; Short=SPase 25 kDa subunit) HSP 1 Score: 186.808 bits (473), Expect = 5.390e-56 Identity = 92/190 (48.42%), Postives = 131/190 (68.95%), Query Frame = 0 Query: 62 TEDQPEVVKVNKWDGSAVKNALDDAVKEILI-NKPQFEEDHGLMDARLLIGGVAVAVSMFALLWDYLHPFPTSKPVLIGCVGTYFVLMGVLTFYTTYMEKGIFVVALEKDPSGLDPPCKWEASSHMKKFDDVYSLTVSVEDGKTKKTRDASFTRSCGDFVDENGLVCLELVEKAVNKIKSTLEGVKKDSS 250 ++ E+VKVNKWDGSAVK+ALDDAVK L+ ++PQ +E GL++ RL + +AV+V++ A WD+ HPFP S+PVL+ V YF L+G+LT ++++ EKG F VAL+KD + WEASS M+K+DD Y LT+SV D K K R+ S +SC F+D+NG+V LV VN++ + L KK++S Sbjct: 8 SQQGEELVKVNKWDGSAVKHALDDAVKTCLLGDRPQLKEQFGLVNTRLALCALAVSVAIMAHAWDFTHPFPESRPVLLFSVLAYFALLGILTLHSSFREKGTFAVALQKDK---ERERLWEASSDMRKYDDKYLLTLSVRDTKNGKRREQSSNKSCAAFIDQNGIVLDNLVANEVNRLFNALAADKKNAS 194
BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Match: gi|1059400747|ref|XP_017773299.1| (PREDICTED: pre-mRNA-processing-splicing factor 8-like, partial [Nicrophorus vespilloides]) HSP 1 Score: 248.44 bits (633), Expect = 1.187e-76 Identity = 119/156 (76.28%), Postives = 128/156 (82.05%), Query Frame = 0 Query: 276 NKFPALREASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALFV 431 N+ P L S +M E+ WDG+KTI+IT S TPGSCSLTAYKL PSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRH+ SMKY+L L NPKEFYHEVHRPAHFLNF+SLED DG GADR+ F Sbjct: 110 NELPQLSPQDIN-THSRLMDENSNWDGEKTIIITSSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPSMKYDLQLANPKEFYHEVHRPAHFLNFSSLED--GDGAGADREDAFA 262
BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Match: gi|668457741|gb|KFB45731.1| (Dsim\GD15247-PA-like protein [Anopheles sinensis]) HSP 1 Score: 240.35 bits (612), Expect = 7.641e-75 Identity = 112/155 (72.26%), Postives = 130/155 (83.87%), Query Frame = 0 Query: 276 NKFPALREASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 N+ P L A +MSE+ WDG+KTIVITCS TPGSCSLTAYKL PSG+EWG +NTDKGNNPKGYLPSHYE+VQMLLS++FLGFFMVP+QGSWNYNFMGVRH+ +MKYEL L NPKEFYHE+HRP+HFL F+SLE+ G DG GADR+ +F Sbjct: 12 NELPQLSPQDITTHAR-IMSENPAWDGEKTIVITCSFTPGSCSLTAYKLTPSGYEWGHKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEIHRPSHFLLFSSLEEAG-DGNGADREDMF 164
BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Match: gi|815771651|ref|XP_012235984.1| (PREDICTED: pre-mRNA-processing-splicing factor 8 [Linepithema humile]) HSP 1 Score: 259.225 bits (661), Expect = 8.191e-73 Identity = 122/155 (78.71%), Postives = 132/155 (85.16%), Query Frame = 0 Query: 276 NKFPALREASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 N+ P L A VM+E+ +WDG+KTIVITCS TPGSCSLTAYKL PSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRH+ +MKYEL L NPKEFYHEVHRPAHFLNF+SLED DG GADR+ +F Sbjct: 2220 NELPQLSPQDISTHA-RVMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPAHFLNFSSLED--GDGVGADREDMF 2371
BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Match: gi|751237120|ref|XP_011172427.1| (PREDICTED: pre-mRNA-processing-splicing factor 8 [Solenopsis invicta]) HSP 1 Score: 258.84 bits (660), Expect = 1.145e-72 Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 0 Query: 276 NKFPALREASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 N+ P L A +M+E+ +WDG+KTIVITCS TPGSCSLTAYKL PSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRH+ +MKYEL L NPKEFYHEVHRPAHFLNF+SLED DG GADR+ +F Sbjct: 2219 NELPQLSPQDISTHA-RIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPAHFLNFSSLED--GDGVGADREDMF 2370
BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Match: gi|1070150630|ref|XP_018357932.1| (PREDICTED: pre-mRNA-processing-splicing factor 8 [Trachymyrmex cornetzi] >gi|1009407915|gb|KYN27328.1| Pre-mRNA-processing-splicing factor 8 [Trachymyrmex cornetzi]) HSP 1 Score: 258.84 bits (660), Expect = 1.156e-72 Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 0 Query: 276 NKFPALREASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 N+ P L A +M+E+ +WDG+KTIVITCS TPGSCSLTAYKL PSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRH+ +MKYEL L NPKEFYHEVHRPAHFLNF+SLED DG GADR+ +F Sbjct: 2220 NELPQLSPQDISTHA-RIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPAHFLNFSSLED--GDGVGADREDMF 2371
BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Match: gi|1069682735|ref|XP_018302633.1| (PREDICTED: pre-mRNA-processing-splicing factor 8 [Trachymyrmex zeteki] >gi|1069682738|ref|XP_018302634.1| PREDICTED: pre-mRNA-processing-splicing factor 8 [Trachymyrmex zeteki] >gi|1012982231|gb|KYQ56045.1| Pre-mRNA-processing-splicing factor 8 [Trachymyrmex zeteki]) HSP 1 Score: 258.84 bits (660), Expect = 1.167e-72 Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 0 Query: 276 NKFPALREASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 N+ P L A +M+E+ +WDG+KTIVITCS TPGSCSLTAYKL PSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRH+ +MKYEL L NPKEFYHEVHRPAHFLNF+SLED DG GADR+ +F Sbjct: 2220 NELPQLSPQDISTHA-RIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPAHFLNFSSLED--GDGVGADREDMF 2371
BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Match: gi|1070606004|ref|XP_018400624.1| (PREDICTED: pre-mRNA-processing-splicing factor 8 [Cyphomyrmex costatus] >gi|1009374256|gb|KYM98040.1| Pre-mRNA-processing-splicing factor 8 [Cyphomyrmex costatus]) HSP 1 Score: 258.84 bits (660), Expect = 1.167e-72 Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 0 Query: 276 NKFPALREASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 N+ P L A +M+E+ +WDG+KTIVITCS TPGSCSLTAYKL PSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRH+ +MKYEL L NPKEFYHEVHRPAHFLNF+SLED DG GADR+ +F Sbjct: 2220 NELPQLSPQDISTHA-RIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPAHFLNFSSLED--GDGVGADREDMF 2371
BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Match: gi|801400213|ref|XP_012060652.1| (PREDICTED: pre-mRNA-processing-splicing factor 8 [Atta cephalotes] >gi|1068397316|ref|XP_018047006.1| PREDICTED: pre-mRNA-processing-splicing factor 8 [Atta colombica] >gi|1009358836|gb|KYM83996.1| Pre-mRNA-processing-splicing factor 8 [Atta colombica]) HSP 1 Score: 258.84 bits (660), Expect = 1.167e-72 Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 0 Query: 276 NKFPALREASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 N+ P L A +M+E+ +WDG+KTIVITCS TPGSCSLTAYKL PSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRH+ +MKYEL L NPKEFYHEVHRPAHFLNF+SLED DG GADR+ +F Sbjct: 2220 NELPQLSPQDISTHA-RIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPAHFLNFSSLED--GDGVGADREDMF 2371
BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Match: gi|746862176|ref|XP_011061994.1| (PREDICTED: pre-mRNA-processing-splicing factor 8 [Acromyrmex echinatior] >gi|332020392|gb|EGI60812.1| Pre-mRNA-processing-splicing factor 8 [Acromyrmex echinatior]) HSP 1 Score: 258.84 bits (660), Expect = 1.167e-72 Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 0 Query: 276 NKFPALREASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 N+ P L A +M+E+ +WDG+KTIVITCS TPGSCSLTAYKL PSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRH+ +MKYEL L NPKEFYHEVHRPAHFLNF+SLED DG GADR+ +F Sbjct: 2220 NELPQLSPQDISTHA-RIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPAHFLNFSSLED--GDGVGADREDMF 2371
BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Match: gi|826420689|ref|XP_012525283.1| (PREDICTED: pre-mRNA-processing-splicing factor 8 [Monomorium pharaonis]) HSP 1 Score: 258.84 bits (660), Expect = 1.178e-72 Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 0 Query: 276 NKFPALREASTKRMASNVMSEHEVWDGKKTIVITCSPTPGSCSLTAYKLMPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHEASMKYELPLRNPKEFYHEVHRPAHFLNFASLEDDGADGRGADRDALF 430 N+ P L A +M+E+ +WDG+KTIVITCS TPGSCSLTAYKL PSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRH+ +MKYEL L NPKEFYHEVHRPAHFLNF+SLED DG GADR+ +F Sbjct: 2219 NELPQLSPQDISTHA-RIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPAHFLNFSSLED--GDGVGADREDMF 2370 The following BLAST results are available for this feature:
BLAST of pre-mrna-processing-splicing factor 8 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of pre-mrna-processing-splicing factor 8 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 20
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BLAST of pre-mrna-processing-splicing factor 8 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold3155_size9965:233..7642- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold3155_size9965-snap-gene-0.1 ID=maker-scaffold3155_size9965-snap-gene-0.1|Name=pre-mrna-processing-splicing factor 8|organism=Tigriopus kingsejongensis|type=gene|length=7410bp|location=Sequence derived from alignment at scaffold3155_size9965:233..7642- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'pre-mrna-processing-splicing factor 8' has the following synonyms
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