atp-dependent rna helicase ddx55, maker-scaffold365_size194585-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Match: EMLSAG00000010227 (supercontig:LSalAtl2s:LSalAtl2s679:403636:405959:-1 gene:EMLSAG00000010227 transcript:EMLSAT00000010227 description:"maker-LSalAtl2s679-augustus-gene-3.17") HSP 1 Score: 583.178 bits (1502), Expect = 0.000e+0 Identity = 332/614 (54.07%), Postives = 432/614 (70.36%), Query Frame = 0 Query: 15 WDCLGLHPSLMSTLAR--LGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQK-HEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKS---VTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKST---MTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKE--KEDETTKISQRTPSTLANFYMICQPD-QKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRN-SVPIFAIHGKKG-KRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLE-AQEDLDELEEDYKILKKIRKGKINKDAFDKEIDLEA 613 W L L ++ + L F MTP+QA AIPLFL +KDV AEAVTGSGKTLAF +PIL LL+ K H+IGA+I+SPTRELA+QI +V+E FL I L +L IGG V + FE+EGA+II+ATPGRLED+L+GK++S K+ +G K +IL+LDEADRLL LGFE IN I+SFLPKQRRT LFSATQTKD+++LIRAGLRNPVLV VKE KE+E + TP L N+YM C P +KFA L+ FL+ E +K M+FF+TCACVEYFS +LER L++ + P+FA+HG+KG R ++F+ F+ G+LVCTDV++RGVD P+V WV+QFD P AEAFVHR GRTAR G G ALL LLP ED+Y+DFI INQKV +V + L K L +R+W +DR + + KAFVS+V+AYSKHECKYIL++KDLPFGELA AYGLLKMP+MPELK + V GF P+ + N IKYK+K++E SRQ+KLK YKE+G WPG K+ L QAWS + V++Q R K + L+ SE + +K + +QED D+LE+D+++LKK++KGK+++ +D +I LE+ Sbjct: 13 WSVLPLKSKVILDVIHNDLKFKKMTPIQAXAIPLFLGLKDVCAEAVTGSGKTLAFVIPILEILLNSSNEESKVHDIGALILSPTRELASQISQVLEVFLSKIPSLNSLLIIGGGGSSSVGETLRKFEKEGAKIIIATPGRLEDILTGKTESINQLKAEKMARGFKSTKILILDEADRLLRLGFETAINTIISFLPKQRRTSLFSATQTKDLDELIRAGLRNPVLVKVKEHGKENELS-----TPIKLTNYYMKCDPPAKKFATLLKFLKT-EAAGKKTMVFFSTCACVEYFSTLLERFLKDDNTPVFALHGQKGGTRFKIFDKFKKLDMGVLVCTDVLSRGVDFPDVEWVVQFDAPKTAEAFVHRIGRTARSGAVGNALLLLLPTEDSYIDFIKINQKVDFDKMEV--ITGLPKTL-PVIRNWLLHDRDLMEKGIKAFVSYVRAYSKHECKYILKVKDLPFGELASAYGLLKMPKMPELKKIKVTGFIPEKV---DLNSIKYKEKLREDSRQKKLKIYKESGKWPGMKEHL----SDTQAWS----RNVERQXRKKLRHLV------SEKKRREKEKISQEDEDDLEKDFRLLKKLKKGKVSQKEYDDDIKLES 600
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Match: EMLSAG00000002659 (supercontig:LSalAtl2s:LSalAtl2s153:555306:559625:1 gene:EMLSAG00000002659 transcript:EMLSAT00000002659 description:"maker-LSalAtl2s153-augustus-gene-5.7") HSP 1 Score: 243.047 bits (619), Expect = 3.155e-72 Identity = 164/491 (33.40%), Postives = 262/491 (53.36%), Query Frame = 0 Query: 25 MSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLR-NPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGKK--GKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARI-GHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSM-RNDGFNQIKYKDKMKEKS 510 ++ + +GF MT +QA IP L+ +D+ A TGSGKTL+F +P + + L+ + ++ G II+SPTREL+ Q V+ E LK H L +GG + ++ + G I+VATPGRL D L +K + K L+ L++DEADR+L +GFE+ + I+ LPK+R+T LFSAT TK E L++ L+ P+ + + D T S L Y+IC P +K L+ + R +K M+FF++C V+Y + + +P+ +IHGK+ KR F F +A SG+L+CTDV ARG+DIP+V+W++Q+DP + + ++HR GRTAR G G ALL L P E V F+ ++ + + + ++ QL + + A +AF +V AY H K I ++ L + + G + P + ++ K +P + +N F ++K + K+K Sbjct: 131 LNGIQDMGFSQMTEIQAQTIPHLLEGRDLVGAAKTGSGKTLSFLIPAVELIYKLKF-MPRNGTGVIIISPTRELSMQTFGVLRELLKYHCHTYG-LVMGGANRNTEAQKLNK-GINIVVATPGRLLDHLRN-TKDFL-------YKNLQCLIIDEADRILDVGFEEEMKKIIQLLPKKRQTMLFSATTTKKTEDLVKLALKKEPIYIGIDSANDNGAA----TVSGLEQGYVIC-PSEKRLLLLFTFLKKNRK-KKVMVFFSSCMSVKYHHELFNYI---DLPVQSIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPDVDWIVQYDPTDDPKEYIHRVGRTARGEGGKGHALLILRPEE---VGFLRYLRQANVPLNEFEFSWSKVSDIQPQLEKLISKNYFLNASAKEAFKGYVXAYESHSLKQIFNVQTLDLKAVGKSLGFVSPPHI-DIGVYSSKHARPRKIQKNKDFEKVKIFKQGKKKG 597
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Match: EMLSAG00000007706 (supercontig:LSalAtl2s:LSalAtl2s449:21910:24507:-1 gene:EMLSAG00000007706 transcript:EMLSAT00000007706 description:"maker-LSalAtl2s449-snap-gene-0.33") HSP 1 Score: 226.483 bits (576), Expect = 1.065e-64 Identity = 153/458 (33.41%), Postives = 241/458 (52.62%), Query Frame = 0 Query: 37 TPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHG--KKGKRHRVFEDF-RSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNED-----------AYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELK 480 T +Q +I L + DV A TG GKTLAF +PIL LL E + +GA++++PTRELA QI E + + K L IGGK + + I++ TPGRL + + + L+ILVLDEADR L LGF +T+N IL LPK+R+T LFSATQT+ ++ L R L+NPV VS+ E +K S TP L YM+C+ D+K L++F++ ++ K ++F +C YF +L++ +R V + ++G + +R ++E+F + S +L TD+ ARG+D P+V+WV Q D P + + ++HR GRTAR G +L+ L P+E+ ++ I +N K Q ++ NL D + ++A +AF S++++ + K I + + A + GL+ P++ LK Sbjct: 126 TQIQKESIGLCFRGSDVLGAAKTGCGKTLAFVIPILE-LLHREKWTKLDGLGALVITPTRELAYQIFETLRKVGKH-HEFSAGLVIGGKDLQYETKRLS--TCNIVICTPGRLLQHMDENPQFDPIT--------LQILVLDEADRCLDLGFAETMNAILGNLPKERQTLLFSATQTRSIKDLGRLSLKNPVYVSIHEH----SKFS--TPEKLTQNYMVCELDKKMDMLLSFIKSHRKS--KTLVFVQSCKQARYFQELLKK-IRVGVSVLGLYGTLHQLRRMSIYEEFCQEENSMVLFATDIAARGLDFPKVDWVFQLDCPEDGKTYLHRVGRTARHASIGKSLMLLTPSEEEGMLKQLSIHRVPIERIEVNPKKLTTCQ-----MKIEANLAG--------DNNLKEMAQRAFQSYIKSIYLMKNKAIFDVFQIETDTYARSLGLVVTPKVRFLK 549
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Match: EMLSAG00000000991 (supercontig:LSalAtl2s:LSalAtl2s116:1961290:1963414:1 gene:EMLSAG00000000991 transcript:EMLSAT00000000991 description:"maker-LSalAtl2s116-augustus-gene-19.39") HSP 1 Score: 209.149 bits (531), Expect = 1.808e-59 Identity = 150/510 (29.41%), Postives = 261/510 (51.18%), Query Frame = 0 Query: 11 STTTWDCLGLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKML---FIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPK------QRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETT-------KISQRTPSTLANFYMICQPDQKFANLIAFL--RQPERTTEKFMLFFATCACVEYFSVVLERLLRN----SVPIFAIHGK--KGKRHRVFEDFRSAKSGL------LVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDA--------------SELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKH--ECKYILRLKDLPFGELAMAYGLLKMP 474 S + +D G+HP ++ L +G T VQ++ IP L KDV + TGSGK LA ALP+LH+L ++ TP + +D G +++ GG+ S+ + G I+V+TPGRL D + K+K+ SK+ LV DEADR+L LG+E+ +N I++ + + +R+T L SAT T+ + +L L++P V + + + ++ P L +++ + L +F+ + ++ +K ++F AT V+Y + E+ L + ++ +HG +G+R +VF DFR SG+ L+CTDV ARG+D+P+V+W++Q++PP + +VHR GRTARIG G++LLF+LP+E ++ + NQK+ + D + A NL ++ D ++ ++ ++A+VSF+++Y+ + E +++ KDL G +A ++GL P Sbjct: 91 SQSQFDGHGIHPYIIKNLDSMGISRPTAVQSATIPRILAGKDVLVKXQTGSGKXLAXALPLLHSLQAI-TP--------------------------QIHRDSGFFARIVPGVLHGGEKRKSEKARLRK-GLNILVSTPGRLLDHIH-KTKTLDLSKI-------HYLVFDEADRMLDLGYERDVNDIINAISENSSEEIKRQTILLSATLTQGIRQLSEVSLKHPDYVDITSTDGNSVMAISDDLQVDTAVPENLQQTFIVVPAKLRLITLSSFILWKCGGKSMKKILIFLATQDMVDYHHTLFEQSLYSEEGKNIKFMKLHGNMDQGERTKVFNDFREIDSGVISSGLVLLCTDVAARGLDLPKVDWIVQYNPPISTADYVHRIGRTARIGLKGSSLLFVLPSETGFLHEVE-NQKLARFVELTVDRVLEKVFPSDKRRSLEQAATNLQLKMETLIVEDSQLKEMGSQAYVSFIRSYASYPKEVRHLFCFKDLHLGHIAKSFGLRDAP 563
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9") HSP 1 Score: 203.756 bits (517), Expect = 6.119e-59 Identity = 136/375 (36.27%), Postives = 205/375 (54.67%), Query Frame = 0 Query: 10 DSTTTWDCLGLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQ--RRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGKKGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFL 382 + TTT+ LGL L LG+ T + +Q AIP+ L +D+ A TGSGKT AFALP+L +LL E P A++++PTRELA QI E E+ K IG +K ++ +GG + S ++ II+ATPGRL D + + S L+ L++DEADR+L++ FE ++ ILS LP+ R+ LFSAT TK V KL RA LR+PV V V K K+ Q +Y+ K L+ + E F++F +TC+ +++L L ++P+ + KR F++ +L+ TDV +RG+DIP V+ V+ +D P++++ ++HR GRTAR G G A+ F+ Sbjct: 21 EDTTTFSDLGLTEVLCEACESLGWKTPSKIQKEAIPVALTGRDIIGLAETGSGKTAAFALPVLQSLL--EKP---QRFFALVLTPTRELAYQISEQFEKLGKSIG-VKCVVLVGGMDMVSQALVLGKK-PHIIIATPGRLIDHMENTKGFDLRS--------LKYLIMDEADRILNMDFEIEVDKILSALPRGEGRKNMLFSATMTKKVAKLQRASLRDPVRVEVSSKYQTVDKLLQ--------YYLFIPLKYKEMYLVHIIN--ELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNG-QMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITFV 369
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30") HSP 1 Score: 197.593 bits (501), Expect = 4.050e-54 Identity = 124/379 (32.72%), Postives = 197/379 (51.98%), Query Frame = 0 Query: 14 TWDCLGLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFA-IHG--KKGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAY 389 W G+ ++ L R G+ TP+Q AIP+ + +D+ A TGSGKTLAF LP+ +++ + AII++PTREL QIG+ I++F K I + + GG ++ + + GA+IIV TPGR+ D+L+ S + + +VLDEADR+ +GFE ++ I+ ++ +FSAT + +E L R L PV V+V + I Q + + + KF L+ L Q R++E ++ F E+ +L+ L+ S A +HG + R + +F++ K +LV T V ARG+D+ E+ V+ +D P++ E +VHRCGRT R G+ G A FL P + Y Sbjct: 223 NWTHAGVSQRILDLLKRNGYEKPTPIQTQAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMAQPELEEGDGPIAIIMTPTRELCMQIGKEIKKFSKAIKGARSVCVYGGTGISEQIAELKR-GAEIIVCTPGRMIDMLAANSGRVTNCRR------ITYVVLDEADRMFDMGFEPQVSRIIDNCRPDKQMVMFSATFPRQMEALARRILCKPVEVTVGGRSVVCKDIDQSV--------YVLEEEHKFLKLLELLGQ--RSSEGLIIIFVDKQ--EHADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATFLTPEQGRY 582
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Match: EMLSAG00000012967 (supercontig:LSalAtl2s:LSalAtl2s98:1266421:1269115:1 gene:EMLSAG00000012967 transcript:EMLSAT00000012967 description:"maker-LSalAtl2s98-augustus-gene-12.20") HSP 1 Score: 183.726 bits (465), Expect = 9.590e-50 Identity = 124/376 (32.98%), Postives = 199/376 (52.93%), Query Frame = 0 Query: 15 WDCLGLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGKKGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYV 390 + +GL + + + G+ TP+Q IPL L+ +DV A TGSGKT AF +P+L L S + + A+I+SPTREL+ Q +E K G LK M +GG+S+ +++ATPGR L ++ + ++ +V DEADRL LGF + + IL L R+T LFSAT K + + +AGL +P LV + D TKI P TL+ ++ C+ + K A L+ L++ E+ ++F AT VEY ++L+ ++ I++ ++ + F S + +L+ TD+ ARG+DIP ++ V+ + P+ ++ F+HR GR AR G G A+ F+ +E AY+ Sbjct: 33 FQSMGLSREVFRGIQKKGYKVPTPIQRKTIPLILEGRDVVGMARTGSGKTGAFLIPLLEKLCSG----NRGKPRAMILSPTRELSLQTLRFFKELAKFSG-LKAMSILGGESMEKQFAGMHN-NPDVLIATPGRFVHL---------CVEMNLRLDAIQYVVFDEADRLFELGFGEQLKEILGRLSDDRQTLLFSATLPKLLVEFAKAGLNDPTLVRL----DVDTKI----PETLSLAFISCRDEGKPALLVHILQKLIAKEEQTIVFLATRHHVEYIHLLLDSAEISNTYIYSQLDPSARKINTAK-FTSNQCSVLLVTDLAARGIDIPLLDNVINYHFPAKSKLFIHRVGRVARAGRSGLAISFVAGDELAYM 384
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Match: EMLSAG00000011335 (supercontig:LSalAtl2s:LSalAtl2s781:205091:212596:-1 gene:EMLSAG00000011335 transcript:EMLSAT00000011335 description:"maker-LSalAtl2s781-augustus-gene-2.34") HSP 1 Score: 180.644 bits (457), Expect = 6.094e-48 Identity = 129/377 (34.22%), Postives = 205/377 (54.38%), Query Frame = 0 Query: 16 DCLGLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVT---SDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGL-RNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGKKGKRHRV--FEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNE 386 D LGL P L+ +G TPVQ + + LK + A TGSGKT AFALPIL L E P + + A++++PTRELA QIG+ + K + +K + +GG+ + S+++T I++ATPGRL D L +S +SKL +K + LV+DEADRLL GF++ ++ I + +P +R+T LF+AT T+ ++ LI + P +E ED+ + + T +TL +Y++ D + A L+ + + +L+ C FS V ++H K +R R+ FRS + +L+ TDV +RG+DI +V +V+ + P++A+ +VHR GRTAR G G + L P++ Sbjct: 77 DILGLKPWLLRQCETIGLKAPTPVQQATVSKILKGANGVGIAKTGSGKTAAFALPILDALS--EDP---YGVFALVLTPTRELAYQIGDTFKILGKPLN-VKVSIIVGGRDMVMQGSELST----SPHILIATPGRLADHL----QSITSSKL---LKKIRFLVIDEADRLLEGGFDEQLSQIFTAIPSERQTLLFTATHTEALKDLIEVNSDKQPFFY--REGEDDASSL---TVNTLEQYYVLTPADFRDAYLVGXDHEMPGGVSQCILY-NIC-----FSNV------------SLHSMKPQRERLQSLSRFRSHLAKILIATDVASRGLDIQQVEYVINHNIPTDAKDYVHRVGRTARAGRXGXXISLLXPHD 413
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Match: EMLSAG00000007141 (supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1 gene:EMLSAG00000007141 transcript:EMLSAT00000007141 description:"maker-LSalAtl2s402-augustus-gene-4.12") HSP 1 Score: 167.933 bits (424), Expect = 1.919e-46 Identity = 113/377 (29.97%), Postives = 205/377 (54.38%), Query Frame = 0 Query: 14 TWDCLGLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQ-KFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGKKGKRHR--VFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNED 387 T+D +GL L+ + GF + +Q +I LK +DV A+A +G+GKT F++ IL S++T ++ E +++SPTRELA QI +V+ L D +++ IGG ++ D+ + G ++ TPGR+ D++ ++ T +G+K +LVLDEAD +L+ GF++ I + +LP + L SAT ++ ++ + +P+ + VK E T F++ + ++ KF L T + ++F T V++ + E++ + + ++HG ++ R + ++FRS +S +L+ TDV ARG+D+ +V+ V+ +D P+N E ++HR GR+ R G G A+ F + N+D Sbjct: 29 TFDSMGLREDLLRGIYAYGFEKPSAIQQRSIKPILKGRDVIAQAQSGTGKTATFSISILQ---SIDTTMR--ETQCLVLSPTRELAVQIQKVLLA-LGDYMNVQCHACIGGTNLGEDIRKLDY-GQHVVSGTPGRVYDMIRRRTLRT------RGIK---MLVLDEADEMLNKGFKEQIYDVYRYLPPFTQIALISATLPHEILEMTSKFMADPIRILVKRDE--------LTLEGXKQFFVAVEREEWKFDTLCDLY--DTLTITQAVIFCNTKRKVDWLT---EKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF-VKNDD 375
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Match: EMLSAG00000002458 (supercontig:LSalAtl2s:LSalAtl2s1472:18624:24320:1 gene:EMLSAG00000002458 transcript:EMLSAT00000002458 description:"maker-LSalAtl2s1472-snap-gene-0.14") HSP 1 Score: 172.94 bits (437), Expect = 1.542e-45 Identity = 126/392 (32.14%), Postives = 188/392 (47.96%), Query Frame = 0 Query: 24 LMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPL---QKHEIGAIIVSPTRELATQIGEVIEEFL-----KDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGKKGK--RHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDG--TALLFLLPNEDAYVD----FIAINQKV 399 ++ L G T +Q IP L +D+ A TGSGK+L F LPI+ L E L Q +IV P+RELA QI E I + ++ L IGG S + M ++ G I+VATPGRL DLL+ K ++ L LDEADR++ +GFE+ + I S+ QR+T LFSAT K ++ ++ L P+ V+V + I Q + + K ++I L++ T +L FA + + E LL V ++HG K + R + DFR+ + +LV TDV ++G+D P + V+ +D P + E +VHR GRT R G T ++ L +E+ +D I QKV Sbjct: 984 IIKALKEKGIERPTSIQMQGIPAVLSGRDLIGIAYTGSGKSLVFILPIVMFCLEQEKRLPFVQNEGPYGLIVVPSRELAKQIHESIYSYFSYLKKNSFPEIRSCLAIGGTSSSETMDVVKK-GVHIVVATPGRLMDLLNKK---------MLNLEICRYLCLDEADRMIDMGFEEDVRTIFSYFKGQRQTLLFSATMPKKIQNFAQSALVKPITVNVGRAGAASMNIIQEVEYV--------KSEAKVVHIIEMLKK----TPPPVLIFAERK--QDVDAIHEYLLLKGVSAVSVHGGKDQDDRSKAVTDFRNLRKDVLVATDVASKGLDFPCIQHVINYDMPDDIENYVHRIGRTGRGNFKGYATTMINKLVDENVLLDLKHLLIEAKQKV 1351
BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Match: gi|115502145|sp|Q6ZPL9.2|DDX55_MOUSE (RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD box protein 55) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 318/620 (51.29%), Postives = 412/620 (66.45%), Query Frame = 0 Query: 14 TWDCLG--LHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEI-----------DLEAMDTDED 619 W+ L LHP ++ L LGF MTPVQ++ IPLF+K KDVAAEAVTGSGKTLAF +PIL LL E L+K+++GAI+++PTRELA QI EV+ F K ++L+IGG++ D+ F++ G IIVATPGRLED+ K++ L VK L++LVLDEADRLL +GFE +IN IL FLPKQRRTGLFSATQT++VE L+RAGLRNPV +SVKEK + +Q+TPS L N YMIC+ D+KF L+ FLR R EK ++FF+TCACVEY+ LE LL+ V I IHGK K KR+++F +FR +SG+LVCTDVMARG+DIPEVNWVLQ+DPPSNA AFVHRCGRTARIGH G+AL+FLLP E+AY++F+AINQK L + + +L+ +LR DR VF+ KAFVSFVQAY+KHEC I RLKDL F LA + LL+MPRMPEL+ F P + D I +KDK++EK RQ+ L+ ++ S +K KF +AWS + KK +K+ K++ E D ED++EL D ++LKK +KGKI ++ F+K + DL D +ED Sbjct: 8 AWESLQVPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGL---DLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASS-TQKTPSRLENHYMICKADEKFNQLVHFLRS--RQQEKHLVFFSTCACVEYYGKALEALLKK-VKILCIHGKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNT---IDLLPKLRAMALADRAVFEKGMKAFVSFVQAYAKHECSLIFRLKDLDFAGLARGFALLRMPRMPELRGKQFPDFVPVDIDTD---TIPFKDKIREKQRQKLLEQKRKERSENEGRK----KFIKNKAWSKQKAKKERKKKMNAKRKK-------DEGSDID----DEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTSAKRTVQLTDLGVSDLEED 599
BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Match: gi|82199952|sp|Q6AZV7.1|DDX55_XENLA (RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD box protein 55) HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0 Identity = 309/609 (50.74%), Postives = 411/609 (67.49%), Query Frame = 0 Query: 9 MDSTT--TWDCL--GLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQ---LRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEI 609 M++ T TWD L L+ S+ TL L F MTPVQ++ IPLF+ KD+AAEA+TGSGKTLAF +P+L LL E L+K+++GA+I++PTRELA QI EV+ F K ++L IGG + D+ F+E G IIVATPGRLED+ ++ L VK L++L+LDEADRLL +GFE +IN IL FLPKQRRTGLFSATQT+++E L+RAGLRNPV ++VKEK T +Q+TP L N+YMIC+ D+KF LIAFL++ R EK ++FF+TCACVEY+ LE LL+ V + IHGK K KR+R+F +FR SG+LVCTDVMARG+DI EVNWV+Q+DPPS+A AFVHRCGRTARIGH G+AL+FLLP E++YV F++INQK L Q++ + ++ +L+ +L+ DR VF+ KAFVS+VQAY+KHEC I R+KDL F LA +GLL+MPRMPELK F + D I YKDK +EK RQ+ LK KE G K F +AWS + +K +KQ L+ KK+E + G D+DEL +D ++LK+++KGKI ++ F+K++ Sbjct: 1 MENVTEGTWDSLPQKLNGSIRRTLEELKFTHMTPVQSATIPLFMNNKDIAAEAITGSGKTLAFVIPLLEILLKREEKLKKNQVGALIITPTRELAVQIDEVLSCFTKHFPQFSQILLIGGSNPVDDVRKFKEHGGNIIVATPGRLEDMFRRQADGL---DLVICVKTLDVLILDEADRLLDMGFEASINTILGFLPKQRRTGLFSATQTQELENLVRAGLRNPVRIAVKEKGVAATS-TQKTPIRLQNYYMICKADEKFNKLIAFLQK--RKQEKHLVFFSTCACVEYYGKALEMLLK-PVKVMCIHGKMKHKRNRIFTEFRKINSGILVCTDVMARGIDIHEVNWVVQYDPPSSASAFVHRCGRTARIGHHGSALVFLLPMEESYVSFLSINQKCPL--QEMTELI-ISVDLLPKLKAMAETDRAVFEKGMKAFVSYVQAYAKHECNLIFRVKDLDFSSLARGFGLLRMPRMPELKGKNFSDFVSTLIDTDS---IAYKDKNREKQRQKMLKERKEKLETEGRK-----HFAKNKAWSKQKARKEKKQKVALKRKKEEGSDIDEG--------------DVDELLQDTRLLKRLKKGKITEEEFEKQL 577
BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Match: gi|82197869|sp|Q5ZLN8.1|DDX55_CHICK (RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD box protein 55) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 303/598 (50.67%), Postives = 405/598 (67.73%), Query Frame = 0 Query: 15 WDCL--GLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEI 609 W L L P ++ L LGF MTPVQ++ IPLF+ KDVAAEAVTGSGKTLAF +PIL LL E L+K ++GAII++PTRELA QI EV+ F K ++L IGG++ D+ F+E G IIVATPGRLEDL K+ L VK L++LVLDEADRLL +GFE ++N IL+FLPKQRRTGLFSATQT++VE L+RAGLRNPV +SVKEK T +Q+TP+ L N+YMIC+ D+KF L+ FLRQ ++ EK ++FF+TCACVEY+ LE L++ V I IHGK K KR+++F +FR G+LVCTDVMARG+DIPEV+WVLQ+DPPS+A AFVHRCGRTARIG+ G+AL+FLLP E++Y++F++INQK + P + L +L+ +L+ DR VF+ KAFVS++QAY+KHEC I R+KDL F LA + LLKMP+MPEL+ F P ++ D I +KDK +EK RQ++L+ ++ KK KF ++WS QK R KK++L + S D ED++EL D ++LK+++KGKI+++ F+K + Sbjct: 9 WSSLPVALSPGVLRALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGL---DLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAATN-TQKTPTRLENYYMICKADEKFNQLVHFLRQHKQ--EKHLVFFSTCACVEYYGKALESLIKQ-VKIMCIHGKMKHKRNKIFTEFRRLAGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNAGSALVFLLPMEESYINFLSINQKCPMQEMQ-PQRNVL--DLLPKLKSMALADRAVFEKGMKAFVSYIQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKMPELRGKCFPDFTPVTVNTDS---IPFKDKNREKQRQKQLEQQRKEREESEGKK----KFIKNKSWSK------QKAKREKKRKLTAKRKREEGSDMED-----EDMEELLNDTRLLKRLKKGKISEEEFEKRL 578
BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Match: gi|115502143|sp|Q2NL08.1|DDX55_BOVIN (RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD box protein 55) HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0 Identity = 315/625 (50.40%), Postives = 414/625 (66.24%), Query Frame = 0 Query: 14 TWDCLG--LHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKN---LISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKL--KTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEI-----------DLEAMDTDED 619 +W+ L LHP ++S L LGF MTPVQ++ IPLF+K KDVAAEAVTGSGKTLAF +PI LL E +K ++GAII++PTRELA QI EV+ F K ++L+IGG++ D+ F+E G IIVATPGRLED+ K++ L V+ LE+LVLDEADRLL +GFE +IN IL FLPKQRRTGLFSATQT++VE L+RAGLRNPV +SVKEK + +Q+TPS L N YM+C+ D+KF L+ FLR ++ EK ++FF+TCACVEY+ LE L++ V I IHGK K KR+++F +FR +SG+LVCTDVMARG+DIPEVNWVLQ+DPPSNA AFVHRCGRTARIGH G+AL+FLLP E++Y+ F+AINQK L +L KN L+ +L+ DR VF+ KAFVS+VQAY+KHEC I RLKDL F LA + LL+MP+MPEL+ F P + D I +KDK++EK RQ++L + KE G + KF +AWS + KK +K+ +K + + +E ED++EL D ++LKK +KGKI ++ F+K + DLE D ++D Sbjct: 8 SWESLPVPLHPKVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIEEILLRREEKFKKSQVGAIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGRLEDMFRRKAEGL---DLASCVRSLEVLVLDEADRLLDMGFETSINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASS-TQKTPSRLENHYMVCKADEKFNQLVHFLRNHKQ--EKHLVFFSTCACVEYYGKALETLVK-GVKIMCIHGKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYISFLAINQKCPL------QEMKLQKNTADLLPKLKAMALGDRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVNTD---TIPFKDKIREKQRQKQLLEQQRKEKTENDGRR-----KFIKNKAWSKQKAKKEKKKKLTEK----------RKREEGSDVE-DEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTSGKRSTNKADLEISDLEDD 600
BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Match: gi|296439376|sp|Q8NHQ9.3|DDX55_HUMAN (RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD box protein 55) HSP 1 Score: 555.444 bits (1430), Expect = 0.000e+0 Identity = 286/532 (53.76%), Postives = 376/532 (70.68%), Query Frame = 0 Query: 14 TWDCLG--LHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWS 542 +W+ L LHP ++ L LGF MTPVQ++ IPLF++ KDVAAEAVTGSGKTLAF +PIL LL E L+K ++GAII++PTRELA QI EV+ F K ++L+IGG++ D+ F+++G IIVATPGRLED+ K++ L V+ L++LVLDEADRLL +GFE +IN IL FLPKQRRTGLFSATQT++VE L+RAGLRNPV VSVKEK + +Q+TPS L N+YM+C+ D+KF L+ FLR ++ EK ++FF+TCACVEY+ LE L++ V I IHGK K KR+++F +FR +SG+LVCTDVMARG+DIPEVNWVLQ+DPPSNA AFVHRCGRTARIGH G+AL+FLLP E++Y++F+AINQK L Q++ A +L+ +L+ DR VF+ KAFVS+VQAY+KHEC I RLKDL F LA + LL+MP+MPEL+ F P + D I +KDK++EK RQ+ L+ + + ++ KF +AWS Sbjct: 8 SWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGL---DLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASS-AQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQ--EKHLVFFSTCACVEYYGKALEVLVK-GVKIMCIHGKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPL--QEMKPQRNTA-DLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVNTD---TIPFKDKIREKQRQKLLEQQRREKTENEGRR----KFIKNKAWS 522
BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Match: gi|74947993|sp|Q9VHU1.1|DDX55_DROME (RecName: Full=Probable ATP-dependent RNA helicase DDX55 homolog; Short=DEAD box protein 55) HSP 1 Score: 547.354 bits (1409), Expect = 0.000e+0 Identity = 307/620 (49.52%), Postives = 397/620 (64.03%), Query Frame = 0 Query: 11 STTTWDCLGLHP---SLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSL--ETPLQKHEIGAIIVSPTRELATQIGEVIEEFLK--DIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKV---TLLAQDVPDASELAKNL---ISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSG-FSESVKADKLE--AQEDLDELEEDYKILKKIRKGKINKDAFDKEIDLEA 613 S W L P +++ + GF MTPVQ +AIPL L KDV+AEAVTGSGKTLAF +P+L L ETP EIGA+++SPTRELA QI EV+ +FL+ D+ HL + L +GG S+ D+ T E I+V TPGRLEDL K L VK LE LVLDEADRLL LGF+ ++N IL +LP+QRRTGLFSATQT +V LIRAGLRNPVLVSVKEK S TP+ L NFY I +P+ KF L+ FL P K M+FF TCACVEY++ L LL + IHGK K KR V E FR+ +L+CTDV+ARG+D+PE+ WV+Q+DPPS A +FVHR GRTAR G++G AL+FLLP+EDAYV F+ INQKV LL ++ DA K L + QL Q D+ V+D +AFVS V+AY+KHEC ILRLKDL G++A AYGLL++PRMPELK G+ + D +++ YK+ KE+ RQ+K++TY++TGSWPG K+ Q K+ K +K+LR KK+ K S S K K + +QEDLDEL D ++ K+++K KI+++ FDK + +E Sbjct: 2 SRKKWSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETPCILVCTPGRLEDLFQRKGDDL---NLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFSATQTTEVTDLIRAGLRNPVLVSVKEK------ASVNTPARLQNFYRIVEPELKFVALLEFLSSPATVIGKVMVFFPTCACVEYWAEALPPLLPKRT-VLGIHGKMKNKRANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPSEDAYVHFLKINQKVELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKHECSAILRLKDLDLGKMATAYGLLQLPRMPELKNYQGGGYVAPAFEVD-LSKLTYKNAQKEQVRQKKMETYEQTGSWPGQKQHKKRVESWDQTKKAKLDAKSKKELRKAKKQRKKAAEAEASRSGKGKKRQQFSQEDLDELASDIRLFKRLKKNKISEEDFDKAMGIEG 610
BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Match: gi|146345411|sp|Q8JHJ2.2|DDX55_DANRE (RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD box protein 55) HSP 1 Score: 545.043 bits (1403), Expect = 0.000e+0 Identity = 298/591 (50.42%), Postives = 408/591 (69.04%), Query Frame = 0 Query: 20 LHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEI 609 LH +++ TL LGF MTPVQ++ IPLF+ KDVAAEAVTGSGKTLAF +P L LL E L+K ++GA+I++PTRELA QI EV+ FL+ ++L IGG + D+ + +GA II+ATPGRLED+ K+ L VK L++LVLDEADRLL +GFE ++N IL +LPKQRRTGLFSATQT+++EKL+RAGLRNPV ++VKEK + + Q+TP+ L+N+Y +C+ ++KF L+AFLRQ + EK ++FF+TCACVEYF LE L++N V I IHGK K KR+++F DFR+ KSG+LVCTDVMARG+DIPEVNWVLQ+DPPS+A +FVHRCGRTARIG+ G AL+FLLP E++YV+F++INQK L Q ++ +++ +L+ DR +F+ +AFVS+VQAY+KHEC I R+KDL F LA + LL++P+MPEL+ FK +++ D I++KDK +EK RQ+ L KE + L F +AWS + KK +K+ R K +L D A+EDL+EL D ++LKK++KGKI ++ FDK++ Sbjct: 16 LHDNILQTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKREEKLKKMQVGALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPGRLEDMFRRKADGL---DLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSV-QKTPAKLSNYYTMCRAEEKFNTLVAFLRQHKH--EKQLVFFSTCACVEYFGKALEVLVKN-VSIHCIHGKMKHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTARIGNQGNALVFLLPMEESYVNFLSINQKCPL--QSFSSVKDVV-DVLPKLKAMALGDRAMFEKGMRAFVSYVQAYAKHECSLIFRIKDLDFAALARGFALLRLPKMPELRGKTFPDFKAEAIDTD---TIRFKDKNREKQRQKWLAEQKE------KEVPLRKNFIKNKAWSKQKIKKDRKKKRLPKAKL-----------DQDSDAAEEDLNELMNDTRLLKKLKKGKITEEDFDKQM 576
BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Match: gi|143361417|sp|Q761Z9.2|RH18_ORYSJ (RecName: Full=DEAD-box ATP-dependent RNA helicase 18; AltName: Full=BRI1-KD-interacting protein 115; Short=BIP115) HSP 1 Score: 439.884 bits (1130), Expect = 9.087e-146 Identity = 255/603 (42.29%), Postives = 361/603 (59.87%), Query Frame = 0 Query: 19 GLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKIS-------QRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERL--LRNSVPIFAIHG--KKGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELK--TVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLK-TYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDK 607 L P ++ L GF TPVQA+AIPL L KDVA +A TGSGKTLAF +P++ L +P + HE+ II+SPTREL++QI V + F + + ML +GG + +++ EEEGA I+V TPG+L D++ + T+ K LEIL+LDEADRLL LGF++ I I+S LPK RRTGLFSATQT+ V++L +AGLRNPV V VK + T K +TP L YMIC+ K + L+ FL Q +K M++FATCACV+Y+++VL L L+ S PI HG K+G R + F + SG+LVCTDV ARG+DIP V+ ++Q+DPP + F+HR GRTAR +G A++FLLP ED YV+F+ + V L + + S A +++ Q+R DR V + AFVSFV+AY +H C YI KDL G L M YGLL++P MPE+K ++ ++GF P +++ +IKYKDK +EK RQ+ LK +E P +K P++ K GK+ Q ++ +ED+DEL +Y++LKK+++G I++D ++K Sbjct: 29 ALSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPGKLFDVM--ERLDTLN------YKNLEILILDEADRLLDLGFQKQITSIISKLPKLRRTGLFSATQTEAVKELAKAGLRNPVRVEVKTEVKPTGKDGAQQELGPSKTPLGLRLEYMICEASNKSSQLVDFLVQ--NNGKKIMVYFATCACVDYWAIVLPLLDSLKGS-PIIPYHGKMKQGPREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLK-RRGVPLTER---ECSTNAVDIVPQIRSAALEDRNVMEKGLTAFVSFVRAYKEHHCSYIFSWKDLEIGRLGMEYGLLQIPSMPEVKHHSLSLEGFTP--VKDVDVTKIKYKDKAREKQRQKTLKRKAEELALRPEIEKRRKAPEKPEKPKRKKTGKQRQ------------------------AVQTKEDMDELANEYRLLKKLKRGVIDEDEYEK 590
BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Match: gi|75334017|sp|Q9FLB0.1|RH18_ARATH (RecName: Full=DEAD-box ATP-dependent RNA helicase 18) HSP 1 Score: 427.557 bits (1098), Expect = 1.202e-141 Identity = 245/597 (41.04%), Postives = 359/597 (60.13%), Query Frame = 0 Query: 20 LHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLL-SLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEK---EDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERL-LRNSVPIFAIHG--KKGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKT--VYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDK 607 L ++ L + F TPVQA+ IPL KDVA +A TGSGKTLAF +P++ L S P + H++ +I+SPTREL+TQI V + F+ + ++ +L +GG+ V +DM EEEG +++ TPGRL D+ M + LEIL+LDEADRLL +GF++ +N I+S LPKQRRTGLFSATQT+ VE+L +AGLRNPV V V+ K E + +TPS L YM C+ D+K + L+ L + + +K ++FF TCA V+Y+ +VL ++ S+ + IHG K+ R + F A SG L+CTDV ARG+DIP +++V+Q+DPP + F HR GRTAR+G G A++FLLP E+AYV+F+ I ++V L + SE A ++I +R DR V + KAFVSFV+AY +H C +I R KDL G+LAM YGLL +P M E+K + +GF P + F +IK+KDK +EK RQ+ L+ KE +K + D A ++ KK ++L K+++ I + ED + ++ DYK++ K++KG I +D +++ Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPGRLSDI--------MERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKKSSQLVDLLIK--NSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFLLPKEEAYVEFMRI-RRVPLEER---KCSEDASDVIPIIRSAAMKDRAVMEKGLKAFVSFVRAYKEHHCSFIFRWKDLEIGKLAMGYGLLYLPSMSEVKQHRLSSEGFTP--VEGVKFEEIKFKDKYREKQRQQNLQVRKEKRQEEKKEKGKRKRVD---ASASNDPKKASRKLTGKQRQTI---------------QTAEDEEVMDRDYKLMIKVKKGLIKEDEYER 585
BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Match: gi|74896812|sp|Q54EC2.1|DDX55_DICDI (RecName: Full=Probable ATP-dependent RNA helicase ddx55; AltName: Full=DEAD box protein 55) HSP 1 Score: 398.282 bits (1022), Expect = 2.072e-129 Identity = 225/561 (40.11%), Postives = 321/561 (57.22%), Query Frame = 0 Query: 7 TTMDSTTTWDCL--GLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHL-------------------------------------------KKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERL-LRNSVPIFAIHGK--KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYK 519 T+ T W+ L L S ++T+ RLGF +M+PVQ++ IPLF+ KDV EA TGSGKTLAF +PI+ +L ET L+K +I +II+SPTRELA QI +V+ EFL D+ + +L IGG + D+ ++ G I++ TPGR ++ L+ ++ K K+ E+L+LDEADRLL +GF IN IL LPKQRRTGLFSATQT +V++L R G+RNP VSV K ET + Q P+TL N YMI +++ L+ FL K +++F TC+ V+YF +L+ + + + P F++HGK +R +VF+ F A +G L+ TD+ ARG+DIP V+WVLQ+D P + +AFVHR GRTAR+G DG AL+FL P ED+Y++F+ I +KV L+ +E N++ +++ NDR + + A VS V+ Y +H C YI L G LA +GLL +PRMPE++ + D +I YK+K KEK R EK+ K Sbjct: 2 TSKVDTGGWNKLENKLSDSTLNTINRLGFKSMSPVQSAVIPLFMSNKDVLVEACTGSGKTLAFVIPIIEKILKRETNLKKTDIASIIISPTRELAIQIQQVLLEFLNDLNRIDDQNDLENIKTLEDELLEEQEEEENEKEEEEIEKKKKKKKIEISSLLLIGGTDIYQDLVNYKNYGGNILIGTPGRTDEFLTRVVRNDQQFKFKE----FEMLILDEADRLLDMGFHLPINSILLKLPKQRRTGLFSATQTSEVKELARTGMRNPFKVSVSVKHIETHE-DQSIPTTLDNRYMIVPVEERLNQLVHFLLN-HIDKNKIIIYFLTCSTVDYFFKILQSVKVLSGKPFFSLHGKAPHSQRIKVFDSFSQATNGCLLSTDLAARGLDIPNVDWVLQYDSPQDPKAFVHRIGRTARMGRDGNALIFLSPEEDSYIEFLKI-KKVPLVEM---VKAENVTNVLPEIKKISFNDREIMEKGVIAMVSHVRGYKEHLCPYIFVFHRLNIGLLATGFGLLYLPRMPEIRDKTLIAEWTSGYTKDQILKIAYKEKKKEKQRLEKVNKIK 552
BLAST of atp-dependent rna helicase ddx55 vs. nr
Match: gi|1339050123|ref|XP_023713326.1| (ATP-dependent RNA helicase DDX55 isoform X1 [Cryptotermes secundus] >gi|1330902581|gb|PNF27904.1| ATP-dependent RNA helicase DDX55 [Cryptotermes secundus] >gi|1330902582|gb|PNF27905.1| ATP-dependent RNA helicase DDX55 [Cryptotermes secundus]) HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0 Identity = 312/610 (51.15%), Postives = 420/610 (68.85%), Query Frame = 0 Query: 14 TWDCLG--LHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEK------EDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGS-KKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMK---SGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEID 610 W+ L L S T+ +GF MTPVQA+ IPL LK KDVAAEAVTGSGKTLAF +P+L L + L++HE+G II+SPTRELATQ V+ FL + H+ +ML IGG SV++D+ F+ +GA I++ATPGRLEDLL K + + VK LE+LVLDEADRLL LGFE+T+ IL +LP+QRRTGLFSATQTKDV +L+RAGLRNPV V++ EK + + ++ TPSTLAN+Y +C+P++K A L+ FLR + + +KFMLFF+TCACVEYF+ VL+ LL +FAIHG+ KG R + F+ F+ AKSG+L+CTDVM RGVDI +VNWV+Q+DPP +A AFVHRCGRTARIG+ G+AL+ LLP EDAYVDFI NQKV L+ + P A + +S +R Q DR V D A +AF S + AYS++EC ILRLKDL FG LA +GLLK+P+MPEL+ V F+ + FN I Y D+ +E+ RQEKLK YK+TG WP S +KS + WS +++++ + ++++ K + SG S+ + L QED+DEL +D ++KK+++ KI+++ FD + D Sbjct: 4 NWNKLDVKLSASTKKTIHEMGFERMTPVQAACIPLLLKNKDVAAEAVTGSGKTLAFIIPMLELLQNRSETLKRHEVGGIIISPTRELATQTSRVLAYFLHHVEHITQMLLIGGNSVSADVDCFKAKGANILIATPGRLEDLLMRKCDINLPA----AVKSLELLVLDEADRLLDLGFEKTLTTILQYLPRQRRTGLFSATQTKDVVQLVRAGLRNPVFVTIHEKCHNKSIDTRSDEVDLSTPSTLANYYTVCKPEEKLATLVGFLRS-QGSHQKFMLFFSTCACVEYFAAVLKVLL-AEFQVFAIHGRMKGTRCKDFDSFQKAKSGVLICTDVMGRGVDIRDVNWVIQYDPPKSAAAFVHRCGRTARIGNQGSALVMLLPTEDAYVDFIYRNQKVHLVEMETPLP---AADTLSCVRSIQLKDRAVMDKALRAFTSHIHAYSRYECNVILRLKDLNFGTLATGFGLLKLPKMPELQGKDVSDFEEVHI---DFNSIPYMDRQRERIRQEKLKIYKKTGIWPKSDQKSKRRSCRQTEPWSLSKQHRMERKSKRDRRKIKKQQQQDSGRSKCKRKRNL-CQEDIDELAKDIALIKKLKRRKISQEEFDDQFD 600
BLAST of atp-dependent rna helicase ddx55 vs. nr
Match: gi|1228002934|ref|XP_021933351.1| (ATP-dependent RNA helicase DDX55 isoform X2 [Zootermopsis nevadensis] >gi|646703508|gb|KDR12156.1| ATP-dependent RNA helicase DDX55 [Zootermopsis nevadensis]) HSP 1 Score: 595.119 bits (1533), Expect = 0.000e+0 Identity = 323/614 (52.61%), Postives = 427/614 (69.54%), Query Frame = 0 Query: 15 WDCLGLHPSLMS--TLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKED--------ETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWP----GSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMK---SGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEID 610 W L + S ++ T+ +GF TMTPVQA+ IPL LK KDVA EAVTGSGKTLAF +P+L L L++HE+G II+SPTRELA Q +V+ FL HL +ML +GG SV +D+ F +GA I++ATPGRLEDLL+ + S VK LE+LVLDEADRLL LGFE+T+ IL +LP+QRRTGLFSATQ K++E+L+RAGLRNPVLV+V EK + T IS TPSTLAN+Y IC+P++K A+L+ FL+ + + +KFMLFF+TCACVEYF+ VL ++L + + +FAIHGK K KR++VF+ FR A SG+L+CTDVMARGVDIPEV+WV+Q+DPPS+A +FVHRCGRTARIG+ G+AL+ LLP EDAYVDFI NQKV L+ P A + IS +R Q DR V D A +AFVS +QAY+KHEC ILRLKDL FG LA GLLK+P+MPEL+ V F + ++ D N I YKD +E+ RQEKLK Y+ETG WP SK+ + +P WS +K++++ + ++L K + SG K + +QED+DEL +D ++KK+++ KI+K+ FD++ D Sbjct: 5 WSKLDVKLSALTKKTIHEMGFKTMTPVQAACIPLLLKNKDVAVEAVTGSGKTLAFIIPMLELLQHRSERLKRHEVGGIIISPTRELAIQTSQVLAHFLHHSDHLTQMLLVGGNSVAADVDYFRVKGANILIATPGRLEDLLTRNCDINLPS----AVKSLELLVLDEADRLLDLGFERTLTTILQYLPRQRRTGLFSATQAKELEQLVRAGLRNPVLVAVHEKSQNKSVSTGPDETDIS--TPSTLANYYTICKPEEKLASLVGFLKS-QGSHQKFMLFFSTCACVEYFASVL-KILFSELQVFAIHGKMKDKRYKVFDSFRKATSGVLICTDVMARGVDIPEVHWVIQYDPPSSAASFVHRCGRTARIGNQGSALVILLPTEDAYVDFIYRNQKVHLVYMKTPSP---AVDTISSVRSLQLKDRAVMDKAIRAFVSHIQAYAKHECNVILRLKDLNFGRLATGLGLLKLPKMPELRGKDVSDF--EEVKID-LNSIPYKDCQRERIRQEKLKIYRETGVWPKTQQASKRISCKQTEP---WSLSKQRKIERKNKRDTRKLRKQQQQDSGVYTKHKRKRNVSQEDIDELAKDIALIKKLKRKKISKEQFDEQFD 601
BLAST of atp-dependent rna helicase ddx55 vs. nr
Match: gi|156384956|ref|XP_001633398.1| (predicted protein [Nematostella vectensis] >gi|156220467|gb|EDO41335.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 590.497 bits (1521), Expect = 0.000e+0 Identity = 305/600 (50.83%), Postives = 420/600 (70.00%), Query Frame = 0 Query: 13 TTWDCL--GLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELI-KMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKE 608 +TW+ L + ++++ ++ F TMTPVQA+AIPLF+ KDVA EAVTGSGKTLAF +PI+ +L E L+KHEIGA+I++PTRELA QI EV+ ++DI +++++L IGG +D+ F+ EGA II+ TPGRLED L+ + L +K LE+LVLDEADRLL +GFE +IN IL +LPKQRRTGLFSATQT +VE L+RAGLRNPV V+V+EK +T + QRTPSTL NFY+IC+ +KF+ L+AFL+ R +K M+FF+TCACV YFS L + L N V I A+HGK K RH++F+ FR +SG+LVCTDVMARGVDIPEVNWV+Q+DPPS+A AFVHRCGRTARIG++G A++FLLP ED+YVDFI+INQKV L A + PD A N+ ++L+ DR +F+ KAFVSFVQAY KHEC I R K+L G LA +GLL++P MPEL+ V + F P + +++I+Y++K +EK RQ++++ E+G +KK + AWS ++++++ R ++E K K F Q DLDEL + +++KK+++GKI+ + F++E Sbjct: 3 STWESSRPSLSQTTLNSMKKMNFSTMTPVQAAAIPLFMSNKDVAVEAVTGSGKTLAFVIPIIEIILRREDKLKKHEIGALIITPTRELAQQIDEVVSTLVEDIPNIRRLLLIGGADPNADLKAFKYEGANIIIGTPGRLEDFLARQQDGI---NLASHLKSLEVLVLDEADRLLDMGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVREKLTKTKNV-QRTPSTLQNFYLICRSHEKFSQLVAFLKA--RKDKKNMVFFSTCACVNYFSKALTKFLPN-VHIMALHGKMKSNRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHRCGRTARIGNEGNAVVFLLPTEDSYVDFISINQKVPLQALE-PDKD--APNITAKLKKLATKDRDLFEKGTKAFVSFVQAYKKHECSLIFRFKELDLGLLAEGFGLLRLPSMPELRGVTIDSFTPHDI---DYDKIRYQEKAREKQRQKRIQALVESGGEGVAKKK---RKKETVAWSRNKERQIKREKRRARREFQRKQKHKFD----------QNDLDELASEARLVKKLKQGKISSEQFNEE 576
BLAST of atp-dependent rna helicase ddx55 vs. nr
Match: gi|1229166187|ref|XP_022096211.1| (ATP-dependent RNA helicase DDX55-like isoform X1 [Acanthaster planci]) HSP 1 Score: 587.8 bits (1514), Expect = 0.000e+0 Identity = 322/613 (52.53%), Postives = 420/613 (68.52%), Query Frame = 0 Query: 15 WDCL--GLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAK-NLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRND-GFNQIKYKDKMKEKSRQEKLKTYKETGSWP---GSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEIDLEAMDTDED 619 W+ L L + +L ++GF MTPVQA+AIPLF+ KDVAAEAVTGSGKTLAF +PIL LL ETPL+K E+GAII++PTRELA QI EV+ +F + L + L IGG ++ +D+ +++GA IIVATPGRLEDL K L V+ LE+LVLDEADRLL +GF+ +IN ILS+LPKQRRTGLFSATQT +VE LIRAGLRNPV ++VKEK+ + + Q+TP TL N+Y+IC+ D+KF LIAFLR+ EK M+FF+TC CV+YFS L +L+ + + ++HGK K +R+ VF +FR SG+LVCTDVMARGVDIPEV+WVLQ+DPPSNA AFVHRCGRTARIG+ G AL+FLLP EDAYVDFI +NQK L Q P E+ K +++ +LR + DR +F+ +AFVSFVQAYSKHEC I RLKDL F LA + LL+MP+MPELK K F PD D ++ I Y++K +EK RQ +K ++ G G K+ L Q WS K K ++Q R ++KE K K +LE +EDL+EL +D +++KK++ GKI+ FDKE+ L+ +E+ Sbjct: 5 WESLPVSLSKTTHKSLQQMGFDRMTPVQAAAIPLFMNNKDVAAEAVTGSGKTLAFVIPILEILLRRETPLKKREVGAIILTPTRELALQIDEVLSDFTTFLPQLTQQLVIGGSNLANDIKQIQDKGANIIVATPGRLEDLFQRKD---FGLNLPAMVRSLEVLVLDEADRLLDMGFKTSINMILSYLPKQRRTGLFSATQTDEVEALIRAGLRNPVRITVKEKKT-SANVIQKTPMTLKNYYLICESDEKFNLLIAFLRK--HREEKHMIFFSTCHCVDYFSKALREILKKTT-VLSLHGKMKRRRNAVFSEFRKLNSGVLVCTDVMARGVDIPEVHWVLQYDPPSNASAFVHRCGRTARIGNTGNALVFLLPTEDAYVDFIQLNQKTPL--QRYPIHEEVEKIDVLPRLRKIAQKDRAMFEGGTRAFVSFVQAYSKHECSLIFRLKDLDFARLARGFALLRMPKMPELKG---KTF-PDFQTLDVDYSAIPYREKAREKQRQTNMKRVQDGGGTSRKKGPKRKL-------QPWSKKQEIKEKRQDRRQRKEHAKKKK--------RQLE-EEDLNELMQDARLVKKLKTGKISDAEFDKEMGLKDASQEEE 588
BLAST of atp-dependent rna helicase ddx55 vs. nr
Match: gi|1250109708|ref|XP_022595527.1| (ATP-dependent RNA helicase DDX55 [Seriola dumerili]) HSP 1 Score: 585.874 bits (1509), Expect = 0.000e+0 Identity = 305/607 (50.25%), Postives = 422/607 (69.52%), Query Frame = 0 Query: 9 MDSTT--TWDCL--GLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKK-VQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEI 609 MD+TT TWD L LH S++ TL L F MTPVQ++ IPLF+ KDVAAEAVTGSGKTLAF +P++ LL E L+K ++GA++++PTRELA QI EV+ +FL +++L IGG + D+ F+++GA I++ATPGRLED+ KS L VK L++LVLDEADRLL +GFE ++N ILS+LPKQRRTGLFSATQT+++EKL+RAGLRNPV ++VKEK T +Q+TP+ L+N+Y IC+ + KF NL+AFLRQ + EK ++FF+TCACVEY+ LE L++ V + IHGK K KR+++F DFRS KSG+LVCTDVMARG+DIP+VNWVLQ+DPPS+A AFVHRCGRTARIG+ G AL+FLLP E+ YV+F++INQK L Q +P S++ +++ +++ DR +FD +AFVS+VQAY+KHEC I R+KDL F LA + LL++P+MPEL+ F ++ + I+YKDK ++K RQ+ LK +ET P F ++WS + KK +K++ AK+K E D ED+ EL D ++LKK++KG+I+++AF+K++ Sbjct: 1 MDNTTDGTWDSLPVQLHESILQTLEELKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPVIELLLKREEKLKKMQVGALVITPTRELALQISEVMGQFLHKFPQFRQILLIGGTNPIEDVEKFKDQGANIVIATPGRLEDMFRRKSDGL---DLASSVKSLDVLVLDEADRLLDMGFEASLNTILSYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAATAAAQKTPARLSNYYTICRSEHKFNNLVAFLRQHKH--EKNLVFFSTCACVEYYGRALETLVKK-VSVCCIHGKMKNKRNKIFADFRSLKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHRCGRTARIGNQGNALVFLLPMEETYVNFLSINQKCPL--QKMPPVSDVV-DVLPKVKAMSLADRAMFDRGMRAFVSYVQAYAKHECSLIFRIKDLDFASLARGFALLRLPKMPELRGKTFPDFAETTVDTE---TIRYKDKNRQKQRQKMLKE-RETNPLPRR------TFTKNKSWSKQKAKKDRRKKVSAKRKH--------DEDSDVD----NEDMKELLNDTRLLKKLKKGQISEEAFEKQL 576
BLAST of atp-dependent rna helicase ddx55 vs. nr
Match: gi|1233207320|ref|XP_022202846.1| (ATP-dependent RNA helicase DDX55-like [Nilaparvata lugens]) HSP 1 Score: 584.719 bits (1506), Expect = 0.000e+0 Identity = 316/610 (51.80%), Postives = 421/610 (69.02%), Query Frame = 0 Query: 13 TTWDCLGLHPSLMSTLAR----LGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFL-KDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQR---NDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWS-NKVGKKVQKQLRAKKKELIKMKS--GFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEID 610 T+W+ + P L +T + LGF +MTPVQAS IPLFLK KDVAAEAVTGSGKTLAF +P+L + P +KHEIG II+SPTRELA Q V++ F+ +D + + +GG SV D+ +F++ GA +I+ATPGRLEDL + + L VK LE+LVLDEADRLL LGFE+T+N I +LPKQRRTGLFSATQTK+VE LIRAGLRNPV VSVK+K D T +S TP L N+Y + + K L+ F++ E +K++LF +TCACV+YFS+V++++L + + +F IHGK K R++VFE F+SA+ G+++CTDVMARG+DIP+++WV+Q+DPPS+A FVHRCGRTARIG++G+ALLFLLPNE+AY+DFI NQK L +PD+ +L + R Q+ DR VFD AN+AFVS++QAY KHEC +LR+KDL FG LA +GLL++P+MPELK + F P + FN I YK+K +E SRQEKL+ YK TGSWPG P WS NK K Q++ R KKKE K K+ G ++ K K +QE++DEL +D ++KK +K KI ++ F+ E D Sbjct: 11 TSWN--DITPKLSTTTLKAVEDLGFTSMTPVQASCIPLFLKNKDVAAEAVTGSGKTLAFLIPLLEIMKRRNEPWKKHEIGGIIISPTRELALQTKGVLDHFINQDDSNFISLFAVGGNSVLKDVDSFKKNGANVIIATPGRLEDLFTHADIN-----LPLAVKSLEVLVLDEADRLLDLGFEKTLNTIFQYLPKQRRTGLFSATQTKEVEMLIRAGLRNPVAVSVKQKNDSTNSLS--TPLNLHNYYFTVEANDKLDALVNFIKT-EGYNKKYILFMSTCACVDYFSIVIKKIL-SGLKLFFIHGKMKNNRYKVFESFKSAEDGMMICTDVMARGIDIPDIDWVIQYDPPSSASQFVHRCGRTARIGNEGSALLFLLPNEEAYLDFIQRNQKTQLSC--LPDSKKLFRKSDKTFRAVQKMQLQDRDVFDKANRAFVSYIQAYGKHECSIVLRVKDLQFGRLATGFGLLRLPKMPELKNKTITDFTPFDV---DFNSIAYKNKQREVSRQEKLEQYKTTGSWPGKPAKHRTASVP---WSLNKQMKADQQEKRNKKKEYRKRKAEEGKQKAKKKRKAVSQEEIDELMKDVAMIKKFKKKKITEEQFNNEFD 601
BLAST of atp-dependent rna helicase ddx55 vs. nr
Match: gi|1270061761|ref|XP_022793437.1| (ATP-dependent RNA helicase DDX55-like [Stylophora pistillata]) HSP 1 Score: 584.334 bits (1505), Expect = 0.000e+0 Identity = 313/601 (52.08%), Postives = 411/601 (68.39%), Query Frame = 0 Query: 13 TTWDCLG--LHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQA-WSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEI 609 TTW L L S++ + + GF MTPVQA+ IPLF+ KDVA EAVTGSGKTLAF +PI+ LL E L+KH++GAII++PTRELA QI EV+ F +D+ LK++L IGG ++ F+ +G II+ TPGRLEDL++ K + L V+ LE+LVLDEADRLL LGFE +IN IL FLPKQRRTGLFSATQT +VE L+RAGLRNPV V+V+EK +K QRTPSTL NFY C+ KF+ L++FL+ R T K M+FF+TCACV YFS LER L N V + +IHGK K KRH+VF+ FR KSG+L+CTDVMARGVDIPEV+WV+QFDPPS+A AFVHRCGRTARIG+ G ALLFLLP E++YV+FI+INQKV L + ++ ++ +LR DR V++ KAFVSFVQ Y KHEC I R DL G+LA +GLLK+P MPELK V F+P + D ++ YKDK +EK R+ KL ETGS P S K KF + WS +KV+++ R ++E +KM+ ++ + + +++L++L D ++KK++ GKI+K+ D ++ Sbjct: 3 TTWSELSPSLSNSVLDIMDKFGFQKMTPVQAATIPLFMSNKDVAVEAVTGSGKTLAFLIPIVEMLLQREEKLKKHDVGAIIITPTRELAKQIDEVLRTFTEDLVQLKQLLLIGGVDPAENLQRFKSDGGHIIIGTPGRLEDLMTRKQEGL---DLAAHVRSLEVLVLDEADRLLDLGFEDSINTILGFLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVREKYS-NSKSDQRTPSTLKNFYTTCESQVKFSRLVSFLKA--RKTCKNMVFFSTCACVNYFSKALERFLSN-VKVLSIHGKMKSKRHKVFDSFRKLKSGVLICTDVMARGVDIPEVDWVIQFDPPSSASAFVHRCGRTARIGNQGNALLFLLPAEESYVEFISINQKVPLQSFEIEGE---VTDVTPKLRQMAMKDRDVYEKGMKAFVSFVQFYRKHECSLIFRSSDLELGKLATGFGLLKLPIMPELKDKRV-DFEPVDVDVD---KLYYKDKNREKQRKRKLLESSETGSDPTSSKK--KKFRKETVPWSKNKERKVKREKRKARREFLKMQ------LQKHRYD-EDELEDLARDALLVKKLKAGKISKEEVDSQL 580
BLAST of atp-dependent rna helicase ddx55 vs. nr
Match: gi|348535433|ref|XP_003455205.1| (PREDICTED: ATP-dependent RNA helicase DDX55 [Oreochromis niloticus]) HSP 1 Score: 582.408 bits (1500), Expect = 0.000e+0 Identity = 311/615 (50.57%), Postives = 424/615 (68.94%), Query Frame = 0 Query: 9 MDSTT--TWDCL--GLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEIDLEAMDTDE 618 MD+TT TWD L L+ ++ TL L F MTPVQ++ IPLF+ KDVAAEAVTGSGKTLAF +PI+ LL E L+K ++GA++++PTRELA QI EV+E+F++ K++L IGG + D+ F+++GA I++ATPGRLED+ KS L VK L++LVLDEADRLL +GFE ++N IL +LPKQRRTGLFSATQT+++EKL+RAGLRNPV ++VKEK +Q+TPS L+N+Y IC+ + KF NL+AFLRQ + EK ++FF+TCACVEY+ VLE L++ V I IHGK K KR+ +F DFR KSG+LVCTDVMARG+DIP+VNWVLQ+DPPS+A AFVHRCGRTARIG+ G AL+FLLP E+ YV+F++INQK L Q + ++ +++ +++ DR +F+ KAFVS+VQAY+KHEC I R KDL FG LA + LL++PRMPELK F ++ D I+YKDK +EK RQ+ L K+ +P KK+ F +AWS + GKK ++Q A K++ +E D EDL EL +D ++LKK++KG+I+++ F+++I A D+ Sbjct: 1 MDNTTDGTWDRLPVKLNEKILQTLDELKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKLKKMQVGALVITPTRELAVQISEVMEQFIEKFPQFKQILLIGGSNPAEDVEKFKDKGANIVIATPGRLEDMFRRKSDGL---DLASSVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGLAAAATAQKTPSRLSNYYTICRAEDKFNNLVAFLRQHKH--EKLLVFFSTCACVEYYGRVLEMLVKK-VTIHCIHGKMKHKRNSIFADFRKLKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHRCGRTARIGNYGDALVFLLPMEETYVNFLSINQKCPL--QKMSPIKDVV-DVLPKVKAMALEDRAMFERGKKAFVSYVQAYAKHECSLIFRTKDLDFGCLARGFALLRLPRMPELKDKTFPDFIETTVDTD---TIRYKDKNREKQRQKALAELKDKTPFP--KKN----FVKNKAWSKQKGKKERRQKMAAKRK-------HNEDSDVD----DEDLKELLDDTRLLKKLKKGQISEEDFEQQITSGAKSKDK 586
BLAST of atp-dependent rna helicase ddx55 vs. nr
Match: gi|1083272203|ref|XP_018610921.1| (PREDICTED: ATP-dependent RNA helicase DDX55 [Scleropages formosus]) HSP 1 Score: 581.637 bits (1498), Expect = 0.000e+0 Identity = 305/601 (50.75%), Postives = 418/601 (69.55%), Query Frame = 0 Query: 15 WDCL--GLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKE--TGSWPGSKKSLMGKFDPQQAWSNKVGKK-VQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEI 609 W+ L ++ ++ TLA L F MTPVQA+ IPLF+ KDVAAEAVTGSGKTLAF +P+L LL E L+K ++GA+I++PTRELA QI EV+E F++ +++L IGG + D+ F GA I++ TPGRLED+ K+ L VK L++LVLDEADRLL +GFE ++N IL FLPKQRRTGLFSATQT+++EKL+RAGLRNPV ++VKEK T + Q+TP+ L+NFYM+C+ D+KF L+AFLRQ + EK ++FF+TCACVEY+ LE L++N VP+ IHGK K KR+++F +FR KSG+LVCTDVMARG+DIPEVNWVLQ+DPPS+A AFVHRCGRTARIG+ G+AL+FLLP E++YV+F++INQK L Q +P ++ +++ +L+ DR VF+ +AFVS+VQAY+KHEC I R+KDL FG LA + LL+MPRMPEL+ F +++ D I+YKDK +EK RQ++L KE + P K F +AWS + KK +K++ AK+K+ E D ED+ EL D ++LK+++KGKI+++ F+K++ Sbjct: 10 WETLPVKINDQILRTLAELEFTHMTPVQAACIPLFVGNKDVAAEAVTGSGKTLAFVIPLLEILLRREEKLKKMQVGALIITPTRELALQISEVVERFIQSFPQFRQILLIGGSNPIEDVEKFRTFGANIVIGTPGRLEDMFRRKADGL---DLASCVKSLDVLVLDEADRLLDMGFEASLNTILGFLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAATSV-QKTPARLSNFYMVCRADEKFNTLVAFLRQHKH--EKQLVFFSTCACVEYYGRALELLVKN-VPVHCIHGKMKHKRNKIFSEFRKLKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGNQGSALVFLLPMEESYVNFLSINQKCPL--QQMPLVKDVV-DVLPKLKAMALGDRAVFERGMRAFVSYVQAYAKHECSLIFRVKDLDFGALARGFALLRMPRMPELRAKTFPDFVEEAVDTDA---IRYKDKNREKQRQKQLAEKKERKVETLPTRK-----NFQKNKAWSKQKSKKDRRKRMAAKRKQ--------DEGSDVD----DEDMKELLNDTRLLKRLKKGKISEEDFEKQL 580
BLAST of atp-dependent rna helicase ddx55 vs. nr
Match: gi|584020149|ref|XP_006804764.1| (PREDICTED: ATP-dependent RNA helicase DDX55-like [Neolamprologus brichardi]) HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0 Identity = 307/606 (50.66%), Postives = 420/606 (69.31%), Query Frame = 0 Query: 9 MDSTT--TWDCL--GLHPSLMSTLARLGFHTMTPVQASAIPLFLKMKDVAAEAVTGSGKTLAFALPILHTLLSLETPLQKHEIGAIIVSPTRELATQIGEVIEEFLKDIGHLKKMLFIGGKSVTSDMTTFEEEGAQIIVATPGRLEDLLSGKSKSTMTSKLKQGVKCLEILVLDEADRLLSLGFEQTINGILSFLPKQRRTGLFSATQTKDVEKLIRAGLRNPVLVSVKEKEDETTKISQRTPSTLANFYMICQPDQKFANLIAFLRQPERTTEKFMLFFATCACVEYFSVVLERLLRNSVPIFAIHGK-KGKRHRVFEDFRSAKSGLLVCTDVMARGVDIPEVNWVLQFDPPSNAEAFVHRCGRTARIGHDGTALLFLLPNEDAYVDFIAINQKVTLLAQDVPDASELAKNLISQLRDWQRNDRRVFDLANKAFVSFVQAYSKHECKYILRLKDLPFGELAMAYGLLKMPRMPELKTVYVKGFKPDSMRNDGFNQIKYKDKMKEKSRQEKLKTYKETGSWPGSKKSLMGKFDPQQAWSNKVGKKVQKQLRAKKKELIKMKSGFSESVKADKLEAQEDLDELEEDYKILKKIRKGKINKDAFDKEI 609 MD+TT TWD L L+ ++ TL L F MTPVQ++ IPLF+ KDVAAEAVTGSGKTLAF +PI+ LL E L+K ++GA++++PTRELA QI EV+E+F++ K++L IGG + D+ F+++GA I++ATPGRLED+ KS L VK L++LVLDEADRLL +GFE ++N IL +LPKQRRTGLFSATQT+++EKL+RAGLRNPV ++VKEK +Q+TPS L+N+Y IC+ + KF NL+AFLRQ + EK ++FF+TCACVEY+ LE L++ V I IHGK K KR+ +F DFR KSG+LVCTDVMARG+DIP+VNWVLQ+DPPS+A AFVHRCGRTARIG+ G AL+FLLP E+ YV+F++INQK L Q + ++ +++ +++ DR +F+ KAFVS+VQAY+KHEC I R KDL FG LA + LL++PRMPEL+ F ++ D I+YKDK +EK RQ+ L K+ +P KK+ F +AWS + GKK ++Q A K++ +E D EDL EL +D ++LKK++KG+I+++ F+++I Sbjct: 1 MDNTTDGTWDRLPVKLNEKILQTLDELKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKLKKMQVGALVITPTRELAVQISEVMEQFIEKFPQFKQILLIGGSNPAEDVEKFKDKGANIVIATPGRLEDMFRRKSDGL---DLASSVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGLAPAATAQKTPSRLSNYYTICRAEDKFNNLVAFLRQHKH--EKLLVFFSTCACVEYYGRALETLVKK-VTIHCIHGKMKHKRNSIFADFRKLKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHRCGRTARIGNYGNALVFLLPMEETYVNFLSINQKCPL--QKMSPIKDVV-DVLPKVKAMALEDRAMFERGTKAFVSYVQAYAKHECSLIFRTKDLDFGCLARGFALLRLPRMPELRDKTFPDFIETTVDTD---TIRYKDKNREKQRQKALAELKDKTPFP--KKN----FIKNKAWSKQKGKKERRQKMAAKRK-------HNEDSDVD----DEDLKELLDDTRLLKKLKKGQISEEDFEQQI 577 The following BLAST results are available for this feature:
BLAST of atp-dependent rna helicase ddx55 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of atp-dependent rna helicase ddx55 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of atp-dependent rna helicase ddx55 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold365_size194585:113793..120339- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold365_size194585-snap-gene-0.24 ID=maker-scaffold365_size194585-snap-gene-0.24|Name=atp-dependent rna helicase ddx55|organism=Tigriopus kingsejongensis|type=gene|length=6547bp|location=Sequence derived from alignment at scaffold365_size194585:113793..120339- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'atp-dependent rna helicase ddx55' has the following synonyms
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