tetratricopeptide repeat, maker-scaffold373_size192110-snap-gene-0.34 (gene) Tigriopus kingsejongensis

Overview
Nametetratricopeptide repeat
Unique Namemaker-scaffold373_size192110-snap-gene-0.34
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of tetratricopeptide repeat vs. L. salmonis genes
Match: EMLSAG00000001047 (supercontig:LSalAtl2s:LSalAtl2s1172:36964:40530:-1 gene:EMLSAG00000001047 transcript:EMLSAT00000001047 description:"maker-LSalAtl2s1172-augustus-gene-0.32")

HSP 1 Score: 228.409 bits (581), Expect = 5.790e-68
Identity = 119/298 (39.93%), Postives = 184/298 (61.74%), Query Frame = 0
Query:   70 EEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRIL--TKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTG------------------------DTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLDLADQ 341
            E D   ++L++ IKLGIL  Q+ +L+KAEM+LH+ALK A DI+  +G+ Y+  +LAN+AFE+GDY+KAEKL+ DV++R+L   K TP + NS++E+SLKLA++YA  ++ +KA  GF FC  + +KK+K                          D D+D++ LWGM +D + +YLL +G   +A   F+ A+  +  L G+ HTQSL ILNS+G+  SL+ + ++A  YF KA+ L   E+ E +  YLVNLGM+ I+  +K +AL AC +   + +   + E   E+  C+ L  +
Sbjct:  631 ENDSPQDRLVDTIKLGILNIQRDELEKAEMILHMALKMAHDISDTNGVVYINDLLANMAFEKGDYLKAEKLFSDVIQRLLGPPKNTPLQDNSIVEISLKLAQIYAVKKEDKKAEEGFSFCMRSMKKKVKDNQGLLYFVCIKRYDSLFEFRHVYIIDIDEDSLILWGMCQDKYGEYLLSKGQAKSALQHFESAYKAAVSLLGEKHTQSLNILNSLGSTHSLLGNYSEASEYFKKAITL--NEDSEYVQRYLVNLGMSYIQTGLKTDALKACKKGIEISRERKDSETETEASECIKLTQK 926          
BLAST of tetratricopeptide repeat vs. SwissProt
Match: gi|74866120|sp|Q8SYD0.1|TTC19_DROME (RecName: Full=Tetratricopeptide repeat protein 19 homolog, mitochondrial; Flags: Precursor)

HSP 1 Score: 175.637 bits (444), Expect = 1.218e-50
Identity = 104/300 (34.67%), Postives = 165/300 (55.00%), Query Frame = 0
Query:   39 PPSGMDAPLVWGFSFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYL-VNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337
            P SG    + W FS   F   L G G D K E  E+  +LI  IK  IL  Q+   DKAE MLH+AL+ AQDI S DGITYVF ++AN+A ER  + KAEK++ DVMKR+  +G  +E+  ++ +S K+A +       EK+  GF +      K ++    D D + L+G++++WF Q L+ +G Y  A   F+ AF T   ++G  +  S+ ILN++      ++   +A     +A+ L    +D      L  NLG+  +++ +  +A  AC  A  +G++  N + VE++++CL+
Sbjct:   62 PASGSSGGMFWAFS-AAFTLNLFG-GADEKEETPEE--KLIKTIKRSILCIQREQYDKAEQMLHLALRMAQDIQSKDGITYVFDLMANLAMEREQFKKAEKIFTDVMKRLFAEGHTEESPKILHISSKIAHMSQLQGDLEKSFQGFTWTLQQLAKLLEKMPDDKDILELYGLTKNWFGQLLMKQGKYLEAKNLFKEAFDTLINVYGAVNDASVTILNNISVAYVNLEKYAEARETLLEAMELTKELKDATQEGILQANLGLVYLREGLMSQAENACRLAWKLGKQHQNPDAVEQAEYCLN 357          
BLAST of tetratricopeptide repeat vs. SwissProt
Match: gi|332321826|sp|A4QP73.2|TTC19_DANRE (RecName: Full=Tetratricopeptide repeat protein 19, mitochondrial; Short=TPR repeat protein 19; Flags: Precursor)

HSP 1 Score: 145.206 bits (365), Expect = 6.894e-39
Identity = 97/300 (32.33%), Postives = 152/300 (50.67%), Query Frame = 0
Query:   47 LVWGFSFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIK----------TGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336
            L WG       GG     +D K EE +  ++LI  +K    +   G+LD A+  LH A++ A  +++ D I Y ++++AN+AF RG    AEKL+K  M  +L+ GTPQ+ N++IEMSLKLA +YA+  + E A  GF+FC+D+ E K+           + +   DT  L G+S D  A+YL     +  A   ++ A     E  G+SH Q+LV+++ + TV  L   + +A+ Y  KAV L            L N+    +      E+      A A+   +G+ E +E+ Q  L
Sbjct:   88 LAWGAVAFSLFGG-----SDEKTEEQKLEDELILLLKKAKYSMMIGELDAADGFLHRAVRLAHQMHNNDAIIYTYSLMANLAFVRGQLDNAEKLFKAAMSFMLSGGTPQDDNALIEMSLKLASIYATQNKNELAEHGFQFCTDSLEAKMDKQKDLPPESLSDEERKDTRLLLGLSLDARARYLAANHRFIGACRDYRHALQICQEEQGESHPQTLVLMSDLATVLDLRGKHDEALVYVKKAVELGQAAGHPEQHVLLGNMAGILMHNGEFEESAKLYQEALALAHTAGDAEAIEQLQEGL 382          
BLAST of tetratricopeptide repeat vs. SwissProt
Match: gi|332321761|sp|D4A6D7.1|TTC19_RAT (RecName: Full=Tetratricopeptide repeat protein 19, mitochondrial; Short=TPR repeat protein 19; Flags: Precursor)

HSP 1 Score: 121.709 bits (304), Expect = 1.938e-30
Identity = 89/276 (32.25%), Postives = 135/276 (48.91%), Query Frame = 0
Query:   32 RFSPPRGPPS-GMDAPLVWGFSFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIK---------TGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLG 297
            R +P RG     + A L W FS T         G D   E + +  QL+   KL I+   K + + AE++LH AL+ A + ++   ITY + ++AN+AF RG    AE+L+K  M  +L  G  QE N+++E+SLKLA +YA+  + E A+ G++FC  T E KI+           +   +T  L GM  D  A+YLL     S A   ++ A     E+ G+ H Q++V+++ + T          A  Y  +A  LA       L   L NL 
Sbjct:   46 RGAPARGHRVLPLLAALAW-FSRTA--AAEEQPGEDATDEAEAEIIQLLKRAKLSIM---KDEPEAAELILHDALRLAYESDNKKAITYTYDLMANLAFIRGQLENAEQLFKATMSYLLGGGMKQEDNAIVEISLKLANIYAAQNKQEFALAGYEFCISTLEGKIEREKELAEDIMSEERANTYLLLGMCLDSCARYLLFSKQLSQAQRMYEKALQICQEIQGERHPQTIVLMSDLATALDAQGHFDDAYIYMQRASDLAREINHPELHMVLSNLA 315          
BLAST of tetratricopeptide repeat vs. SwissProt
Match: gi|52783457|sp|Q8CC21.1|TTC19_MOUSE (RecName: Full=Tetratricopeptide repeat protein 19, mitochondrial; Short=TPR repeat protein 19; Flags: Precursor)

HSP 1 Score: 121.709 bits (304), Expect = 2.305e-30
Identity = 80/243 (32.92%), Postives = 123/243 (50.62%), Query Frame = 0
Query:   64 GTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIK---------TGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLG 297
            G D   E + +  QL+   KL I+   K + + AE++LH AL+ A + ++   ITY + ++AN+AF RG    AE+L+K  M  +L  G  QE N++IE+SLKLA +YA+  + E A+ G++FC  T E KI+           +   +T  L GM  D  A+YLL     S A   ++ A     E+ G+ H Q++V+++ + T          A  Y  +A  LA       L   L NL 
Sbjct:   76 GEDASDEAEAEIIQLLKQAKLSIM---KDEPEAAELILHDALRLAYESDNRKAITYTYDLMANLAFIRGQLENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLANIYAAQNKQEFALAGYEFCISTLEGKIEREKELAEDIMSEETANTYLLLGMCLDSCARYLLFSKQLSQAQRMYEKALQICQEIQGERHPQTIVLMSDLATTLDAQGHFDDAYIYMQRASDLAREINHPELHMVLSNLA 315          
BLAST of tetratricopeptide repeat vs. SwissProt
Match: gi|332278244|sp|Q6DKK2.4|TTC19_HUMAN (RecName: Full=Tetratricopeptide repeat protein 19, mitochondrial; Short=TPR repeat protein 19; Flags: Precursor)

HSP 1 Score: 120.939 bits (302), Expect = 4.849e-30
Identity = 79/231 (34.20%), Postives = 122/231 (52.81%), Query Frame = 0
Query:   77 QLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIK----------TGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLG 297
            QL+   KL I+   K + ++AE++LH AL+ A   ++   ITY + ++AN+AF RG    AE+L+K  M  +L  G  QE N++IE+SLKLA +YA+  + E AV G++FC  T E+KI+          + +   +T  L GM  D  A+YLL     S A   ++ A   S E+ G+ H Q++V+++ + T         +A  Y  +A  LA       L   L NL 
Sbjct:   98 QLLKRAKLSIM---KDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQLENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIEREKELAEDIMSVEEKANTHLLLGMCLDACARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIVLMSDLATTLDAQGRFDEAYIYMQRASDLARQINHPELHMVLSNLA 325          
BLAST of tetratricopeptide repeat vs. nr
Match: gi|242019346|ref|XP_002430122.1| (tetratricopeptide repeat protein, putative [Pediculus humanus corporis] >gi|212515213|gb|EEB17384.1| tetratricopeptide repeat protein, putative [Pediculus humanus corporis])

HSP 1 Score: 221.861 bits (564), Expect = 1.326e-65
Identity = 118/287 (41.11%), Postives = 183/287 (63.76%), Query Frame = 0
Query:   52 SFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEED-ENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337
            SFT  +   +GL    K +E+ D ++LI  IK GIL  QK D  +AE MLH AL+ AQD+   DGITY++ +LAN+AF    Y+KAEKL+  V++R++ KG  +++N +I++SLKLA+++ + +++ KA  G+KFC DT + K+K  D D+DT+ALWGMS DW+A++LL+    + A   FQ A+    ++ G  H Q++V+LN +GTV SL+ DN  A+SY  KA  +  +  D ++L    +NLG   + + M RE+  AC     M ++  +   V E+++CLD
Sbjct:   96 SFTKEILKTLGL---QKEKEETDESKLIMAIKRGILLIQKKDFKRAEEMLHSALRLAQDMEDEDGITYIYDILANLAFSTEQYVKAEKLFVSVLQRLIAKGEEKDSNRVIDISLKLAKIFETKKEFNKAEQGYKFCIDTLDPKLK--DEDEDTLALWGMSMDWYARFLLEVNRKTDALKCFQKAYEMCVKVNGLLHEQTVVLLNDLGTVCSLLGDNEGALSYLEKAKNIGKSLPDMKDLAAIYINLGQLYLMREMYRESKLACQEGMKMAKKREDESTVSEAKNCLD 377          
BLAST of tetratricopeptide repeat vs. nr
Match: gi|1228015937|ref|XP_021939938.1| (tetratricopeptide repeat protein 19 homolog, mitochondrial [Zootermopsis nevadensis] >gi|646694745|gb|KDR08095.1| Tetratricopeptide repeat protein 19 [Zootermopsis nevadensis])

HSP 1 Score: 210.69 bits (535), Expect = 7.566e-62
Identity = 112/282 (39.72%), Postives = 171/282 (60.64%), Query Frame = 0
Query:   57 LGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEED-ENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337
            L    GL  D   EE E    LI  IK G+L  QKG+  KAE MLHIALK AQD  +YDGITY++ +LAN+A+ERG+Y KAEKL+  VM+ +L+ G P+  N MI +SLKL+ +Y   +   KA  GFKFC  + +   + G  D+DT+ LW M+ DW+A++L++      AF  F+ A+    ++ G ++ +++V+LN +GT+  + +D   A+SY ++AV +     D E+  T L+NLG   +K+ M +EA      A    ++  N ++++E+  CLD
Sbjct:   73 LFNFFGLRNDDIEEEPE----LITTIKRGVLLTQKGEFKKAEQMLHIALKLAQDQQNYDGITYIYDLLANIAYERGEYGKAEKLFLSVMQHLLSVGVPKTDNRMIHISLKLSNIYKIKKDIRKAEEGFKFCVLSLQSNNEKGRCDEDTLLLWAMALDWYARFLVEVNRLPEAFDCFKKAYHLCVKINGMNNEETVVLLNDLGTICFVQNDFDSAISYLTQAVSIGNKLPDMEDFGTILINLGTVYMKKGMMKEAKQVYKDALQNAKKHNNVQVLKEASTCLD 350          
BLAST of tetratricopeptide repeat vs. nr
Match: gi|926627653|ref|XP_013779409.1| (tetratricopeptide repeat protein 19, mitochondrial-like [Limulus polyphemus])

HSP 1 Score: 211.846 bits (538), Expect = 2.734e-61
Identity = 106/292 (36.30%), Postives = 183/292 (62.67%), Query Frame = 0
Query:   55 GFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGD---------TDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337
              L G++G     K EE E+   LI+ IK G+L+ QKGDL+ AE +LH+ALK A+D  +  GITY++ +LAN+AFE+ ++ KAE L+ +VMKR++  GTP++ N+++EMSLKL+ +Y+  +  EKA  GF++C     K+I++ D         T+ D + LW MS DW+A++L+ +GD   A   ++ +   S ++ G SH ++L+++N +G+VAS+  D   A+SY ++A+   T EE  +LP++  NLG+  +++   + A   C +   + ++  N+    E++ C++
Sbjct:  138 ALLAGILGSLGFQKDEEKEEV--LISTIKRGVLSIQKGDLNTAEQILHVALKIAEDEMNPQGITYIYDLLANIAFEKQEHQKAEALFVEVMKRMIASGTPKDDNAILEMSLKLSTIYSEQKLEEKAEDGFRYCFQVLNKRIQSIDLEKVDIFTETEQDDIILWAMSCDWYARHLMSKGDLKNAQQLYEKSLAVSEKVNGPSHPKTLILMNDIGSVASMRKDFDVAISYLNQAIDRGTVEESSDLPSFYCNLGVTLMQKGDLQNAFKTCDKGFQLARKLKNKVAQSEAKKCIE 427          
BLAST of tetratricopeptide repeat vs. nr
Match: gi|1325267859|ref|XP_023343302.1| (tetratricopeptide repeat protein 19 homolog, mitochondrial-like [Eurytemora affinis] >gi|1325267861|ref|XP_023343311.1| tetratricopeptide repeat protein 19 homolog, mitochondrial-like [Eurytemora affinis] >gi|1325267863|ref|XP_023343319.1| tetratricopeptide repeat protein 19 homolog, mitochondrial-like [Eurytemora affinis])

HSP 1 Score: 204.912 bits (520), Expect = 4.929e-60
Identity = 112/294 (38.10%), Postives = 180/294 (61.22%), Query Frame = 0
Query:   46 PLVWGFSFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKI-KTGD-TDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337
            PLV     +GFL  L   G   + E + D   L+  IK GILA Q+GDL +A+ + HIALK A DI   +GIT+++ +LAN A ERG   +AE+L+ D++KR+L+ G PQ++N+++E+SLKLA++++     +KA  GF+FC+ TQ+ K+ K G    +DT+AL+G+  D  AQ+ L +G    A + F+ A L S  + G+ H Q+LVI NS+ +V SL  +  +AV+  S+ +  A +   + LPT+L+N G+  ++  +  +A   CTRA+   +   + E   E+  C++
Sbjct:   35 PLV----LSGFLSWL---GISQQSEPEND---LLITIKRGILAVQEGDLKRADQIFHIALKMAFDIGHEEGITHIYCLLANTALERGLVGQAERLFTDILKRLLSSGEPQDSNAVVEISLKLAQIFSGQNNLQKAEQGFEFCTKTQQLKVEKEGSACSEDTLALYGLCLDKSAQFYLGQGRLEQAESGFRSAVLLSSRIHGEEHEQTLVINNSLASVLSLKGETNQAVTLLSRVITTAESTSCQYLPTFLINRGIIELRAGLIDKAELDCTRAREAAKSLKDEEARREATECIN 318          
BLAST of tetratricopeptide repeat vs. nr
Match: gi|1316157681|ref|XP_023223947.1| (tetratricopeptide repeat protein 19, mitochondrial-like [Centruroides sculpturatus])

HSP 1 Score: 201.83 bits (512), Expect = 5.079e-59
Identity = 106/266 (39.85%), Postives = 165/266 (62.03%), Query Frame = 0
Query:   78 LINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDD-------DTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336
            LI  IK+GIL+ QK + + AE  LH+ALK AQ+  + +  TY++ +LANVAF++ DY KAEKL+ +V +RILT+G  ++ +++IE+SLKL+++Y+  +QY+KA  GFKFC  TQ+KK+     D+       +T+ LW M  DW+A++L+DRG    A   F+ A   S  + G SH Q+LV++N +G+VASL  D   AV  F  A+  +   E  +L ++  NLG   I++     A  AC  A  + ++  N+   E+++ CL
Sbjct:   29 LITIIKMGILSLQKEEYNNAESTLHLALKMAQERANTEAETYIYDILANVAFQKEDYAKAEKLFLEVTRRILTQGKAEDDDAVIEISLKLSKIYSKLKQYDKAETGFKFCIHTQQKKLDLMKLDNTLTEEQQNTLVLWAMGIDWYARHLMDRGYLQDAQKYFEKALAVSERINGASHPQTLVLINDIGSVASLRKDFDSAVEMFKTAIERSKENETPDLSSFYCNLGTTYIRKGEPVLARSACHTALKLAKKFKNKLASEDAKECL 294          
BLAST of tetratricopeptide repeat vs. nr
Match: gi|1000762072|ref|XP_015604091.1| (PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Cephus cinctus])

HSP 1 Score: 203.371 bits (516), Expect = 7.308e-59
Identity = 106/285 (37.19%), Postives = 169/285 (59.30%), Query Frame = 0
Query:   55 GFLGGLVGL-GTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEED-ENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337
            G      GL G+D K  ED+    LI  IK  IL  Q+ D  KAE MLHIAL+QAQ +  Y+ ITY++ ++AN+AF+ GDY KAEKL+  VM+R+++ GTP++   +I +SLK+A++Y      +KA  GF FC  + +K+I +   D+D + LW M+ DW+A+ L ++  ++ A   F  A+     + G  H Q++V+LN +GT++SL  D+ +A+ Y S+AV +     D  +L +  VNLG   +K+ +   A  +C     + +   N E + E+ +CL+
Sbjct:   73 GTAAAFFGLFGSDEK--EDDKIPDLIMAIKRSILLIQREDFKKAEQMLHIALRQAQTLQHYEAITYIYDIMANLAFDVGDYQKAEKLFVSVMQRLISTGTPKDDMKIIHISLKMAKIYQMTGDIQKAEDGFDFCFKSLQKRIDSHKEDEDVILLWAMTLDWYARLLFEQSRHTEALNSFLKAYELCVRINGREHEQTVVLLNDLGTISSLRGDDDEAIDYLSEAVEIGKKLPDMVDLGSIHVNLGNVYMKKGLYEAAKKSCQEGWKLSKNRNNEESLTEASNCLN 355          
BLAST of tetratricopeptide repeat vs. nr
Match: gi|1253752458|ref|XP_022660218.1| (tetratricopeptide repeat protein 19 homolog, mitochondrial-like [Varroa destructor] >gi|1268021523|ref|XP_022708167.1| tetratricopeptide repeat protein 19 homolog, mitochondrial-like isoform X1 [Varroa jacobsoni] >gi|1268021525|ref|XP_022708172.1| tetratricopeptide repeat protein 19 homolog, mitochondrial-like isoform X1 [Varroa jacobsoni] >gi|1268021527|ref|XP_022708180.1| tetratricopeptide repeat protein 19 homolog, mitochondrial-like isoform X2 [Varroa jacobsoni])

HSP 1 Score: 202.986 bits (515), Expect = 1.786e-58
Identity = 113/309 (36.57%), Postives = 182/309 (58.90%), Query Frame = 0
Query:   41 SGMDAPLVWGFSFTG--FLGGLVG-LGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKK----IKTGDT------DDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336
            +G  +   W F  T    LGG++  LG + K +++ED   ++  IK GILA Q+ D  KAE MLH+ALK +Q+       TY F +LA++A   GD  KAEKLY +VM+R++  GT ++ N++IE+S KLA V++     +KA  G++FC DTQEKK    IK  +       + ++VALWGM  DW++++L+ RG Y+ A +    +   S ++FG+SH Q+LV+ N +  V +++ D  +++    + + L + E+ E+LP +L NLG   IK     +A   C RA+ + ++  N   +E ++ CL
Sbjct:   54 NGYGSSQTWQFIATPPLRLGGILAFLGLESKDKDEED--SVVTTIKRGILAFQRKDYKKAERMLHLALKMSQERMDTQAETYCFDLLADIALAHGDLDKAEKLYVEVMRRLIISGTAKDDNAIIEISAKLANVFSKRHDDKKAEQGYQFCIDTQEKKLGELIKNFNNVSFTPEEKNSVALWGMCMDWYSKHLISRGKYAYARSLLSQSLEVSRKIFGESHEQTLVVKNDLALVNTMLKDYKESIRILEEIIGLDSVEQSEDLPAFLCNLGENYIKNGDFDKAQECCERAKELAKKQNNEMAIEVAESCL 360          
BLAST of tetratricopeptide repeat vs. nr
Match: gi|665798525|ref|XP_008547140.1| (PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Microplitis demolitor] >gi|665798527|ref|XP_008547141.1| PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Microplitis demolitor] >gi|665798529|ref|XP_008547142.1| PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Microplitis demolitor])

HSP 1 Score: 201.445 bits (511), Expect = 1.893e-58
Identity = 116/347 (33.43%), Postives = 187/347 (53.89%), Query Frame = 0
Query:    2 ISLRLLRPLAIASPIAR--SFAQTRPR--------RPDPRRFSPPRGPPSGMDAPLVWGFSFTGFLGGLVGLGTDHKGEEDEDFN-QLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATT-EEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336
            +S+R LR  ++   +    +F QT  R        R +  +F   R           W +     +GG+   G +   ++DE+   +LI  IK  IL  QK +  KAE MLH+AL+QAQ IN Y+G+TYV+ V+AN+AF+ G+  K+  L+K VM+R+L+ GT Q    +I MSLK+A +Y      + A  G+KFC +  E+      TD+D + LW MSRDW+A  LL     S A   +Q ++    E++G +H Q++++LN +GTV  L+  + +A+ Y + A+   +   E   L +  VNLG   IK+++  EA  AC       +++ ++E  +++  CL
Sbjct:    1 MSMRFLRATSLFRRVVHFDNFKQTTSRFKSLSLSLRNNQEKFKFRRSK---------WNY----VIGGVSLFGFNFGSKDDEEIEPELIMTIKRSILLIQKEEYKKAEQMLHVALRQAQTINHYEGVTYVYDVMANLAFQVGEIQKSIDLFKIVMQRLLSTGTEQNDTKIIHMSLKVANLYQRAGDNKTAEEGYKFCIEKIEEHAVKNPTDEDILVLWAMSRDWYANMLLSESRLSEALENYQKSYQLCTEIYGKNHEQTVILLNDLGTVCCLLGQHDRALGYLNDAIETGSKLPECPELSSIYVNLGNVYIKKSLYNEAKVACFEGLKRAKKNEDQECRDQANLCL 334          
BLAST of tetratricopeptide repeat vs. nr
Match: gi|755959317|ref|XP_011304360.1| (PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Fopius arisanus] >gi|755959320|ref|XP_011304361.1| PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Fopius arisanus] >gi|755959323|ref|XP_011304362.1| PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Fopius arisanus])

HSP 1 Score: 201.445 bits (511), Expect = 1.997e-58
Identity = 111/281 (39.50%), Postives = 167/281 (59.43%), Query Frame = 0
Query:   58 GGLVGLGTDHKGEEDEDFN-QLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATT-EEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336
            GGL  LG    G+EDE+   +LI  IK  IL  Q+G+  KAE MLH+AL QAQ +  YDGITYV+ VLAN+AFE GD  K++KL+  VM+R+++ GT +    MI +SLKLAR+Y       KA  G+ FC     ++ KT   D+D + LWGM+ DW+ ++LL +     A   +Q A     ++ GD H Q++V+LN +GTV  L+ +  KA+ + S A+ +     E  +L +  VN+G   +K+++  EA  ACT    + +++ + E  E++  CL
Sbjct:   47 GGLAFLGIFGFGKEDEELEPELITTIKRSILLIQRGEYKKAEQMLHVALHQAQTLQHYDGITYVYDVLANLAFEVGDVEKSKKLFVSVMQRLMSTGTAEGDMKMIHISLKLARLYEISGDPGKAENGYAFCLKHVLEQAKTSPEDEDVLLLWGMTLDWYGKFLLSQSRLPEALKCYQQAHKLCQQVHGDEHEQTVVLLNDLGTVYCLLGEYEKALGHLSDAILIGEKLPEMSDLSSIHVNIGNVYLKRSLYNEARDACTVGLKLAKKNNDIECQEQANACL 327          
BLAST of tetratricopeptide repeat vs. nr
Match: gi|817221202|ref|XP_012286118.1| (tetratricopeptide repeat protein 19 homolog, mitochondrial isoform X2 [Orussus abietinus])

HSP 1 Score: 201.445 bits (511), Expect = 2.226e-58
Identity = 113/319 (35.42%), Postives = 182/319 (57.05%), Query Frame = 0
Query:   19 SFAQTRPRRPDPRRFSPPRGPPSGMDAPLVWGFSFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATT-EEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336
            S A    ++ D  R    R P +     L +GF          GL  + K EEDE  ++LI  IK  IL  QKG+  KAE MLH+AL+QAQ +  YD ITY++ +LAN+AF+ GDY KAE L+  VM+R+++ GTPQ    +I +SLK+A+ +       KA  G+KFC  T ++ I +G  ++D + L  M+ DW+A++LL +   + A+  F  ++  S ++ G  H Q++++LN +GTV+S++ +  +A+ YF++A  +     E E+L    +NLG   I + +   A  AC +   + +   N E + E+++CL
Sbjct:   29 SHALIHSQKMDRNRQESGRQPFNNKFLLLAFGF---------FGLLNEKKPEEDE--SELIMTIKRSILLTQKGEYKKAEQMLHVALRQAQTLQHYDAITYIYDLLANLAFDMGDYGKAEPLFVSVMQRLISTGTPQNDLKIIHISLKVAKSFQHKGDVRKAEDGYKFCLKTLQEHIDSGTNNEDVMLLRAMTMDWYARFLLSQSRLTEAYKNFLQSYELSVQVNGKVHDQTVILLNDLGTVSSMLGNEDQALEYFTEAAEIGKNLPEMEDLGWIHINLGKLYIIKGLYDAAKKACEKGFLISKARNNEESLAEARNCL 336          
The following BLAST results are available for this feature:
BLAST of tetratricopeptide repeat vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000010475.790e-6839.93supercontig:LSalAtl2s:LSalAtl2s1172:36964:40530:-1... [more]
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BLAST of tetratricopeptide repeat vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
gi|74866120|sp|Q8SYD0.1|TTC19_DROME1.218e-5034.67RecName: Full=Tetratricopeptide repeat protein 19 ... [more]
gi|332321826|sp|A4QP73.2|TTC19_DANRE6.894e-3932.33RecName: Full=Tetratricopeptide repeat protein 19,... [more]
gi|332321761|sp|D4A6D7.1|TTC19_RAT1.938e-3032.25RecName: Full=Tetratricopeptide repeat protein 19,... [more]
gi|52783457|sp|Q8CC21.1|TTC19_MOUSE2.305e-3032.92RecName: Full=Tetratricopeptide repeat protein 19,... [more]
gi|332278244|sp|Q6DKK2.4|TTC19_HUMAN4.849e-3034.20RecName: Full=Tetratricopeptide repeat protein 19,... [more]
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BLAST of tetratricopeptide repeat vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|242019346|ref|XP_002430122.1|1.326e-6541.11tetratricopeptide repeat protein, putative [Pedicu... [more]
gi|1228015937|ref|XP_021939938.1|7.566e-6239.72tetratricopeptide repeat protein 19 homolog, mitoc... [more]
gi|926627653|ref|XP_013779409.1|2.734e-6136.30tetratricopeptide repeat protein 19, mitochondrial... [more]
gi|1325267859|ref|XP_023343302.1|4.929e-6038.10tetratricopeptide repeat protein 19 homolog, mitoc... [more]
gi|1316157681|ref|XP_023223947.1|5.079e-5939.85tetratricopeptide repeat protein 19, mitochondrial... [more]
gi|1000762072|ref|XP_015604091.1|7.308e-5937.19PREDICTED: tetratricopeptide repeat protein 19 hom... [more]
gi|1253752458|ref|XP_022660218.1|1.786e-5836.57tetratricopeptide repeat protein 19 homolog, mitoc... [more]
gi|665798525|ref|XP_008547140.1|1.893e-5833.43PREDICTED: tetratricopeptide repeat protein 19 hom... [more]
gi|755959317|ref|XP_011304360.1|1.997e-5839.50PREDICTED: tetratricopeptide repeat protein 19 hom... [more]
gi|817221202|ref|XP_012286118.1|2.226e-5835.42tetratricopeptide repeat protein 19 homolog, mitoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold373_size192110supercontigscaffold373_size192110:77698..79202 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold373_size192110-snap-gene-0.34-mRNA-1maker-scaffold373_size192110-snap-gene-0.34-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold373_size192110:77698..79202+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold373_size192110-snap-gene-0.34 ID=maker-scaffold373_size192110-snap-gene-0.34|Name=tetratricopeptide repeat|organism=Tigriopus kingsejongensis|type=gene|length=1505bp|location=Sequence derived from alignment at scaffold373_size192110:77698..79202+ (Tigriopus kingsejongensis)
AGCCACTTCAGTCACTTCATGATCAGCTTGCGCCTCCTCCGGCCTCTGGC CATTGCCAGTCCCATCGCTCGGTCTTTCGCCCAGACCCGTCCCCGGAGAC CCGATCCCAGGCGTTTCAGCCCACCCCGAGGTCCACCCTCGGGCATGGAC GCGCCTCTCGTGTGGGGTTTTTCCTTCACCGGCTTCTTGGGTGGGCTGGT TGGCCTGGGCACTGATCACAAGGGGGAAGAGGATGAGGACTTCAATCAAC TCATCAACAACATTAAACTTGGGATCCTGGCCCAGCAGGTACCACTCGAG TCCTTATCACTCTGGGGGTAAATGTTAGTGCCCAAACTCCTTTGCTCTCA TTTCTCCCCTTCCCTAAGAAAGGTGATCTGGACAAGGCGGAGATGATGCT TCACATTGCCTTGAAGCAAGCTCAAGATATCAATAGCTACGACGGCATCA CCTACGTCTTCACCGTTCTGGCCAATGTGGCCTTTGAAAGGGTAGGCACA TCTTTCCCCAATATGTACCCTACCATACCATAGGCGTGCACGTTCCAGGG CCCAGAGGGAGACACGGACGTGAACGAATTAGGGCATATTGGGATTGTGC GCAAACGTGCACTGATATCATTGACCTGAGACCCTCCCAATGTTCTCATA GGGTGACTATATGAAGGCGGAGAAGCTCTACAAGGACGTGATGAAACGCA TCCTAACCAAGGGAACGCCTCAGGAAGCCAACAGCATGATTGAAATGTCC CTCAAGCTCGCCCGGGTGTATGCCTCGTGGCAGCAGTACGAAAAAGCTGT CCTCGGATTCAAATTCTGCTCGGACACCCAAGAGAAGAAGATCAAAACCG GTAGAGAGCCCATTGCCAATGTGTCACAACCAGGCGAGAGAAACAAAAGA CTCTGAGTGACCTATGCGTGACCTAACCTTCCAGGCGACACAGATGATGA CACGGTGGCCCTTTGGGGGATGAGTCGGGATTGGTTTGCCCAATACCTTC TGGATCGAGGAGACTACTCGGCCGCTTTCACCCAATTTCAAGGGGCTTTC CTCACCTCCTGCGAGCTTTTTGGTGACTCTCATACCCAATCGTTGGTCAT TCTAAACTCAATGGGTAGGAACTATGCACACCTCGCTCTGATAGGCTCTC CCAATGTAATCGCAAGTTCCTCGCTTGTAGGGACTGTGGCCTCCCTGATG GACGACAATACCAAGGCTGTATCCTATTTCTCCAAGGCGGTCCGATTGGC TACCACCGAGGAGGATGAGAATCTCCCCACTTATTTGGTCAACTTGGGAA TGGCTCGGATTAAGCAAGTAAGCGAGTTGTTAGGTCATGTATTCCCGGGA GTCTTAACAGGTGGGGGTTTGATTTCCAGAACATGAAGCGAGAGGCCTTG GGAGCCTGTACACGGGCCCAGGCAATGGGCCAACGCTCTGGAAATCGTGA AATCGTGGAAGAATCCCAACATTGTCTAGATCTGGCGGATCAATTACACA AATGA
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Synonyms
The feature 'tetratricopeptide repeat' has the following synonyms
Synonym
Tk03501
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