tetratricopeptide repeat, maker-scaffold373_size192110-snap-gene-0.34 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of tetratricopeptide repeat vs. L. salmonis genes
Match: EMLSAG00000001047 (supercontig:LSalAtl2s:LSalAtl2s1172:36964:40530:-1 gene:EMLSAG00000001047 transcript:EMLSAT00000001047 description:"maker-LSalAtl2s1172-augustus-gene-0.32") HSP 1 Score: 228.409 bits (581), Expect = 5.790e-68 Identity = 119/298 (39.93%), Postives = 184/298 (61.74%), Query Frame = 0 Query: 70 EEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRIL--TKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTG------------------------DTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLDLADQ 341 E D ++L++ IKLGIL Q+ +L+KAEM+LH+ALK A DI+ +G+ Y+ +LAN+AFE+GDY+KAEKL+ DV++R+L K TP + NS++E+SLKLA++YA ++ +KA GF FC + +KK+K D D+D++ LWGM +D + +YLL +G +A F+ A+ + L G+ HTQSL ILNS+G+ SL+ + ++A YF KA+ L E+ E + YLVNLGM+ I+ +K +AL AC + + + + E E+ C+ L + Sbjct: 631 ENDSPQDRLVDTIKLGILNIQRDELEKAEMILHMALKMAHDISDTNGVVYINDLLANMAFEKGDYLKAEKLFSDVIQRLLGPPKNTPLQDNSIVEISLKLAQIYAVKKEDKKAEEGFSFCMRSMKKKVKDNQGLLYFVCIKRYDSLFEFRHVYIIDIDEDSLILWGMCQDKYGEYLLSKGQAKSALQHFESAYKAAVSLLGEKHTQSLNILNSLGSTHSLLGNYSEASEYFKKAITL--NEDSEYVQRYLVNLGMSYIQTGLKTDALKACKKGIEISRERKDSETETEASECIKLTQK 926
BLAST of tetratricopeptide repeat vs. SwissProt
Match: gi|74866120|sp|Q8SYD0.1|TTC19_DROME (RecName: Full=Tetratricopeptide repeat protein 19 homolog, mitochondrial; Flags: Precursor) HSP 1 Score: 175.637 bits (444), Expect = 1.218e-50 Identity = 104/300 (34.67%), Postives = 165/300 (55.00%), Query Frame = 0 Query: 39 PPSGMDAPLVWGFSFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYL-VNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337 P SG + W FS F L G G D K E E+ +LI IK IL Q+ DKAE MLH+AL+ AQDI S DGITYVF ++AN+A ER + KAEK++ DVMKR+ +G +E+ ++ +S K+A + EK+ GF + K ++ D D + L+G++++WF Q L+ +G Y A F+ AF T ++G + S+ ILN++ ++ +A +A+ L +D L NLG+ +++ + +A AC A +G++ N + VE++++CL+ Sbjct: 62 PASGSSGGMFWAFS-AAFTLNLFG-GADEKEETPEE--KLIKTIKRSILCIQREQYDKAEQMLHLALRMAQDIQSKDGITYVFDLMANLAMEREQFKKAEKIFTDVMKRLFAEGHTEESPKILHISSKIAHMSQLQGDLEKSFQGFTWTLQQLAKLLEKMPDDKDILELYGLTKNWFGQLLMKQGKYLEAKNLFKEAFDTLINVYGAVNDASVTILNNISVAYVNLEKYAEARETLLEAMELTKELKDATQEGILQANLGLVYLREGLMSQAENACRLAWKLGKQHQNPDAVEQAEYCLN 357
BLAST of tetratricopeptide repeat vs. SwissProt
Match: gi|332321826|sp|A4QP73.2|TTC19_DANRE (RecName: Full=Tetratricopeptide repeat protein 19, mitochondrial; Short=TPR repeat protein 19; Flags: Precursor) HSP 1 Score: 145.206 bits (365), Expect = 6.894e-39 Identity = 97/300 (32.33%), Postives = 152/300 (50.67%), Query Frame = 0 Query: 47 LVWGFSFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIK----------TGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336 L WG GG +D K EE + ++LI +K + G+LD A+ LH A++ A +++ D I Y ++++AN+AF RG AEKL+K M +L+ GTPQ+ N++IEMSLKLA +YA+ + E A GF+FC+D+ E K+ + + DT L G+S D A+YL + A ++ A E G+SH Q+LV+++ + TV L + +A+ Y KAV L L N+ + E+ A A+ +G+ E +E+ Q L Sbjct: 88 LAWGAVAFSLFGG-----SDEKTEEQKLEDELILLLKKAKYSMMIGELDAADGFLHRAVRLAHQMHNNDAIIYTYSLMANLAFVRGQLDNAEKLFKAAMSFMLSGGTPQDDNALIEMSLKLASIYATQNKNELAEHGFQFCTDSLEAKMDKQKDLPPESLSDEERKDTRLLLGLSLDARARYLAANHRFIGACRDYRHALQICQEEQGESHPQTLVLMSDLATVLDLRGKHDEALVYVKKAVELGQAAGHPEQHVLLGNMAGILMHNGEFEESAKLYQEALALAHTAGDAEAIEQLQEGL 382
BLAST of tetratricopeptide repeat vs. SwissProt
Match: gi|332321761|sp|D4A6D7.1|TTC19_RAT (RecName: Full=Tetratricopeptide repeat protein 19, mitochondrial; Short=TPR repeat protein 19; Flags: Precursor) HSP 1 Score: 121.709 bits (304), Expect = 1.938e-30 Identity = 89/276 (32.25%), Postives = 135/276 (48.91%), Query Frame = 0 Query: 32 RFSPPRGPPS-GMDAPLVWGFSFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIK---------TGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLG 297 R +P RG + A L W FS T G D E + + QL+ KL I+ K + + AE++LH AL+ A + ++ ITY + ++AN+AF RG AE+L+K M +L G QE N+++E+SLKLA +YA+ + E A+ G++FC T E KI+ + +T L GM D A+YLL S A ++ A E+ G+ H Q++V+++ + T A Y +A LA L L NL Sbjct: 46 RGAPARGHRVLPLLAALAW-FSRTA--AAEEQPGEDATDEAEAEIIQLLKRAKLSIM---KDEPEAAELILHDALRLAYESDNKKAITYTYDLMANLAFIRGQLENAEQLFKATMSYLLGGGMKQEDNAIVEISLKLANIYAAQNKQEFALAGYEFCISTLEGKIEREKELAEDIMSEERANTYLLLGMCLDSCARYLLFSKQLSQAQRMYEKALQICQEIQGERHPQTIVLMSDLATALDAQGHFDDAYIYMQRASDLAREINHPELHMVLSNLA 315
BLAST of tetratricopeptide repeat vs. SwissProt
Match: gi|52783457|sp|Q8CC21.1|TTC19_MOUSE (RecName: Full=Tetratricopeptide repeat protein 19, mitochondrial; Short=TPR repeat protein 19; Flags: Precursor) HSP 1 Score: 121.709 bits (304), Expect = 2.305e-30 Identity = 80/243 (32.92%), Postives = 123/243 (50.62%), Query Frame = 0 Query: 64 GTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIK---------TGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLG 297 G D E + + QL+ KL I+ K + + AE++LH AL+ A + ++ ITY + ++AN+AF RG AE+L+K M +L G QE N++IE+SLKLA +YA+ + E A+ G++FC T E KI+ + +T L GM D A+YLL S A ++ A E+ G+ H Q++V+++ + T A Y +A LA L L NL Sbjct: 76 GEDASDEAEAEIIQLLKQAKLSIM---KDEPEAAELILHDALRLAYESDNRKAITYTYDLMANLAFIRGQLENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLANIYAAQNKQEFALAGYEFCISTLEGKIEREKELAEDIMSEETANTYLLLGMCLDSCARYLLFSKQLSQAQRMYEKALQICQEIQGERHPQTIVLMSDLATTLDAQGHFDDAYIYMQRASDLAREINHPELHMVLSNLA 315
BLAST of tetratricopeptide repeat vs. SwissProt
Match: gi|332278244|sp|Q6DKK2.4|TTC19_HUMAN (RecName: Full=Tetratricopeptide repeat protein 19, mitochondrial; Short=TPR repeat protein 19; Flags: Precursor) HSP 1 Score: 120.939 bits (302), Expect = 4.849e-30 Identity = 79/231 (34.20%), Postives = 122/231 (52.81%), Query Frame = 0 Query: 77 QLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIK----------TGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLG 297 QL+ KL I+ K + ++AE++LH AL+ A ++ ITY + ++AN+AF RG AE+L+K M +L G QE N++IE+SLKLA +YA+ + E AV G++FC T E+KI+ + + +T L GM D A+YLL S A ++ A S E+ G+ H Q++V+++ + T +A Y +A LA L L NL Sbjct: 98 QLLKRAKLSIM---KDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQLENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIEREKELAEDIMSVEEKANTHLLLGMCLDACARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIVLMSDLATTLDAQGRFDEAYIYMQRASDLARQINHPELHMVLSNLA 325
BLAST of tetratricopeptide repeat vs. nr
Match: gi|242019346|ref|XP_002430122.1| (tetratricopeptide repeat protein, putative [Pediculus humanus corporis] >gi|212515213|gb|EEB17384.1| tetratricopeptide repeat protein, putative [Pediculus humanus corporis]) HSP 1 Score: 221.861 bits (564), Expect = 1.326e-65 Identity = 118/287 (41.11%), Postives = 183/287 (63.76%), Query Frame = 0 Query: 52 SFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEED-ENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337 SFT + +GL K +E+ D ++LI IK GIL QK D +AE MLH AL+ AQD+ DGITY++ +LAN+AF Y+KAEKL+ V++R++ KG +++N +I++SLKLA+++ + +++ KA G+KFC DT + K+K D D+DT+ALWGMS DW+A++LL+ + A FQ A+ ++ G H Q++V+LN +GTV SL+ DN A+SY KA + + D ++L +NLG + + M RE+ AC M ++ + V E+++CLD Sbjct: 96 SFTKEILKTLGL---QKEKEETDESKLIMAIKRGILLIQKKDFKRAEEMLHSALRLAQDMEDEDGITYIYDILANLAFSTEQYVKAEKLFVSVLQRLIAKGEEKDSNRVIDISLKLAKIFETKKEFNKAEQGYKFCIDTLDPKLK--DEDEDTLALWGMSMDWYARFLLEVNRKTDALKCFQKAYEMCVKVNGLLHEQTVVLLNDLGTVCSLLGDNEGALSYLEKAKNIGKSLPDMKDLAAIYINLGQLYLMREMYRESKLACQEGMKMAKKREDESTVSEAKNCLD 377
BLAST of tetratricopeptide repeat vs. nr
Match: gi|1228015937|ref|XP_021939938.1| (tetratricopeptide repeat protein 19 homolog, mitochondrial [Zootermopsis nevadensis] >gi|646694745|gb|KDR08095.1| Tetratricopeptide repeat protein 19 [Zootermopsis nevadensis]) HSP 1 Score: 210.69 bits (535), Expect = 7.566e-62 Identity = 112/282 (39.72%), Postives = 171/282 (60.64%), Query Frame = 0 Query: 57 LGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEED-ENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337 L GL D EE E LI IK G+L QKG+ KAE MLHIALK AQD +YDGITY++ +LAN+A+ERG+Y KAEKL+ VM+ +L+ G P+ N MI +SLKL+ +Y + KA GFKFC + + + G D+DT+ LW M+ DW+A++L++ AF F+ A+ ++ G ++ +++V+LN +GT+ + +D A+SY ++AV + D E+ T L+NLG +K+ M +EA A ++ N ++++E+ CLD Sbjct: 73 LFNFFGLRNDDIEEEPE----LITTIKRGVLLTQKGEFKKAEQMLHIALKLAQDQQNYDGITYIYDLLANIAYERGEYGKAEKLFLSVMQHLLSVGVPKTDNRMIHISLKLSNIYKIKKDIRKAEEGFKFCVLSLQSNNEKGRCDEDTLLLWAMALDWYARFLVEVNRLPEAFDCFKKAYHLCVKINGMNNEETVVLLNDLGTICFVQNDFDSAISYLTQAVSIGNKLPDMEDFGTILINLGTVYMKKGMMKEAKQVYKDALQNAKKHNNVQVLKEASTCLD 350
BLAST of tetratricopeptide repeat vs. nr
Match: gi|926627653|ref|XP_013779409.1| (tetratricopeptide repeat protein 19, mitochondrial-like [Limulus polyphemus]) HSP 1 Score: 211.846 bits (538), Expect = 2.734e-61 Identity = 106/292 (36.30%), Postives = 183/292 (62.67%), Query Frame = 0 Query: 55 GFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGD---------TDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337 L G++G K EE E+ LI+ IK G+L+ QKGDL+ AE +LH+ALK A+D + GITY++ +LAN+AFE+ ++ KAE L+ +VMKR++ GTP++ N+++EMSLKL+ +Y+ + EKA GF++C K+I++ D T+ D + LW MS DW+A++L+ +GD A ++ + S ++ G SH ++L+++N +G+VAS+ D A+SY ++A+ T EE +LP++ NLG+ +++ + A C + + ++ N+ E++ C++ Sbjct: 138 ALLAGILGSLGFQKDEEKEEV--LISTIKRGVLSIQKGDLNTAEQILHVALKIAEDEMNPQGITYIYDLLANIAFEKQEHQKAEALFVEVMKRMIASGTPKDDNAILEMSLKLSTIYSEQKLEEKAEDGFRYCFQVLNKRIQSIDLEKVDIFTETEQDDIILWAMSCDWYARHLMSKGDLKNAQQLYEKSLAVSEKVNGPSHPKTLILMNDIGSVASMRKDFDVAISYLNQAIDRGTVEESSDLPSFYCNLGVTLMQKGDLQNAFKTCDKGFQLARKLKNKVAQSEAKKCIE 427
BLAST of tetratricopeptide repeat vs. nr
Match: gi|1325267859|ref|XP_023343302.1| (tetratricopeptide repeat protein 19 homolog, mitochondrial-like [Eurytemora affinis] >gi|1325267861|ref|XP_023343311.1| tetratricopeptide repeat protein 19 homolog, mitochondrial-like [Eurytemora affinis] >gi|1325267863|ref|XP_023343319.1| tetratricopeptide repeat protein 19 homolog, mitochondrial-like [Eurytemora affinis]) HSP 1 Score: 204.912 bits (520), Expect = 4.929e-60 Identity = 112/294 (38.10%), Postives = 180/294 (61.22%), Query Frame = 0 Query: 46 PLVWGFSFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKI-KTGD-TDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337 PLV +GFL L G + E + D L+ IK GILA Q+GDL +A+ + HIALK A DI +GIT+++ +LAN A ERG +AE+L+ D++KR+L+ G PQ++N+++E+SLKLA++++ +KA GF+FC+ TQ+ K+ K G +DT+AL+G+ D AQ+ L +G A + F+ A L S + G+ H Q+LVI NS+ +V SL + +AV+ S+ + A + + LPT+L+N G+ ++ + +A CTRA+ + + E E+ C++ Sbjct: 35 PLV----LSGFLSWL---GISQQSEPEND---LLITIKRGILAVQEGDLKRADQIFHIALKMAFDIGHEEGITHIYCLLANTALERGLVGQAERLFTDILKRLLSSGEPQDSNAVVEISLKLAQIFSGQNNLQKAEQGFEFCTKTQQLKVEKEGSACSEDTLALYGLCLDKSAQFYLGQGRLEQAESGFRSAVLLSSRIHGEEHEQTLVINNSLASVLSLKGETNQAVTLLSRVITTAESTSCQYLPTFLINRGIIELRAGLIDKAELDCTRAREAAKSLKDEEARREATECIN 318
BLAST of tetratricopeptide repeat vs. nr
Match: gi|1316157681|ref|XP_023223947.1| (tetratricopeptide repeat protein 19, mitochondrial-like [Centruroides sculpturatus]) HSP 1 Score: 201.83 bits (512), Expect = 5.079e-59 Identity = 106/266 (39.85%), Postives = 165/266 (62.03%), Query Frame = 0 Query: 78 LINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDD-------DTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336 LI IK+GIL+ QK + + AE LH+ALK AQ+ + + TY++ +LANVAF++ DY KAEKL+ +V +RILT+G ++ +++IE+SLKL+++Y+ +QY+KA GFKFC TQ+KK+ D+ +T+ LW M DW+A++L+DRG A F+ A S + G SH Q+LV++N +G+VASL D AV F A+ + E +L ++ NLG I++ A AC A + ++ N+ E+++ CL Sbjct: 29 LITIIKMGILSLQKEEYNNAESTLHLALKMAQERANTEAETYIYDILANVAFQKEDYAKAEKLFLEVTRRILTQGKAEDDDAVIEISLKLSKIYSKLKQYDKAETGFKFCIHTQQKKLDLMKLDNTLTEEQQNTLVLWAMGIDWYARHLMDRGYLQDAQKYFEKALAVSERINGASHPQTLVLINDIGSVASLRKDFDSAVEMFKTAIERSKENETPDLSSFYCNLGTTYIRKGEPVLARSACHTALKLAKKFKNKLASEDAKECL 294
BLAST of tetratricopeptide repeat vs. nr
Match: gi|1000762072|ref|XP_015604091.1| (PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Cephus cinctus]) HSP 1 Score: 203.371 bits (516), Expect = 7.308e-59 Identity = 106/285 (37.19%), Postives = 169/285 (59.30%), Query Frame = 0 Query: 55 GFLGGLVGL-GTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEED-ENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCLD 337 G GL G+D K ED+ LI IK IL Q+ D KAE MLHIAL+QAQ + Y+ ITY++ ++AN+AF+ GDY KAEKL+ VM+R+++ GTP++ +I +SLK+A++Y +KA GF FC + +K+I + D+D + LW M+ DW+A+ L ++ ++ A F A+ + G H Q++V+LN +GT++SL D+ +A+ Y S+AV + D +L + VNLG +K+ + A +C + + N E + E+ +CL+ Sbjct: 73 GTAAAFFGLFGSDEK--EDDKIPDLIMAIKRSILLIQREDFKKAEQMLHIALRQAQTLQHYEAITYIYDIMANLAFDVGDYQKAEKLFVSVMQRLISTGTPKDDMKIIHISLKMAKIYQMTGDIQKAEDGFDFCFKSLQKRIDSHKEDEDVILLWAMTLDWYARLLFEQSRHTEALNSFLKAYELCVRINGREHEQTVVLLNDLGTISSLRGDDDEAIDYLSEAVEIGKKLPDMVDLGSIHVNLGNVYMKKGLYEAAKKSCQEGWKLSKNRNNEESLTEASNCLN 355
BLAST of tetratricopeptide repeat vs. nr
Match: gi|1253752458|ref|XP_022660218.1| (tetratricopeptide repeat protein 19 homolog, mitochondrial-like [Varroa destructor] >gi|1268021523|ref|XP_022708167.1| tetratricopeptide repeat protein 19 homolog, mitochondrial-like isoform X1 [Varroa jacobsoni] >gi|1268021525|ref|XP_022708172.1| tetratricopeptide repeat protein 19 homolog, mitochondrial-like isoform X1 [Varroa jacobsoni] >gi|1268021527|ref|XP_022708180.1| tetratricopeptide repeat protein 19 homolog, mitochondrial-like isoform X2 [Varroa jacobsoni]) HSP 1 Score: 202.986 bits (515), Expect = 1.786e-58 Identity = 113/309 (36.57%), Postives = 182/309 (58.90%), Query Frame = 0 Query: 41 SGMDAPLVWGFSFTG--FLGGLVG-LGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKK----IKTGDT------DDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATTEEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336 +G + W F T LGG++ LG + K +++ED ++ IK GILA Q+ D KAE MLH+ALK +Q+ TY F +LA++A GD KAEKLY +VM+R++ GT ++ N++IE+S KLA V++ +KA G++FC DTQEKK IK + + ++VALWGM DW++++L+ RG Y+ A + + S ++FG+SH Q+LV+ N + V +++ D +++ + + L + E+ E+LP +L NLG IK +A C RA+ + ++ N +E ++ CL Sbjct: 54 NGYGSSQTWQFIATPPLRLGGILAFLGLESKDKDEED--SVVTTIKRGILAFQRKDYKKAERMLHLALKMSQERMDTQAETYCFDLLADIALAHGDLDKAEKLYVEVMRRLIISGTAKDDNAIIEISAKLANVFSKRHDDKKAEQGYQFCIDTQEKKLGELIKNFNNVSFTPEEKNSVALWGMCMDWYSKHLISRGKYAYARSLLSQSLEVSRKIFGESHEQTLVVKNDLALVNTMLKDYKESIRILEEIIGLDSVEQSEDLPAFLCNLGENYIKNGDFDKAQECCERAKELAKKQNNEMAIEVAESCL 360
BLAST of tetratricopeptide repeat vs. nr
Match: gi|665798525|ref|XP_008547140.1| (PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Microplitis demolitor] >gi|665798527|ref|XP_008547141.1| PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Microplitis demolitor] >gi|665798529|ref|XP_008547142.1| PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Microplitis demolitor]) HSP 1 Score: 201.445 bits (511), Expect = 1.893e-58 Identity = 116/347 (33.43%), Postives = 187/347 (53.89%), Query Frame = 0 Query: 2 ISLRLLRPLAIASPIAR--SFAQTRPR--------RPDPRRFSPPRGPPSGMDAPLVWGFSFTGFLGGLVGLGTDHKGEEDEDFN-QLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATT-EEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336 +S+R LR ++ + +F QT R R + +F R W + +GG+ G + ++DE+ +LI IK IL QK + KAE MLH+AL+QAQ IN Y+G+TYV+ V+AN+AF+ G+ K+ L+K VM+R+L+ GT Q +I MSLK+A +Y + A G+KFC + E+ TD+D + LW MSRDW+A LL S A +Q ++ E++G +H Q++++LN +GTV L+ + +A+ Y + A+ + E L + VNLG IK+++ EA AC +++ ++E +++ CL Sbjct: 1 MSMRFLRATSLFRRVVHFDNFKQTTSRFKSLSLSLRNNQEKFKFRRSK---------WNY----VIGGVSLFGFNFGSKDDEEIEPELIMTIKRSILLIQKEEYKKAEQMLHVALRQAQTINHYEGVTYVYDVMANLAFQVGEIQKSIDLFKIVMQRLLSTGTEQNDTKIIHMSLKVANLYQRAGDNKTAEEGYKFCIEKIEEHAVKNPTDEDILVLWAMSRDWYANMLLSESRLSEALENYQKSYQLCTEIYGKNHEQTVILLNDLGTVCCLLGQHDRALGYLNDAIETGSKLPECPELSSIYVNLGNVYIKKSLYNEAKVACFEGLKRAKKNEDQECRDQANLCL 334
BLAST of tetratricopeptide repeat vs. nr
Match: gi|755959317|ref|XP_011304360.1| (PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Fopius arisanus] >gi|755959320|ref|XP_011304361.1| PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Fopius arisanus] >gi|755959323|ref|XP_011304362.1| PREDICTED: tetratricopeptide repeat protein 19 homolog, mitochondrial [Fopius arisanus]) HSP 1 Score: 201.445 bits (511), Expect = 1.997e-58 Identity = 111/281 (39.50%), Postives = 167/281 (59.43%), Query Frame = 0 Query: 58 GGLVGLGTDHKGEEDEDFN-QLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATT-EEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336 GGL LG G+EDE+ +LI IK IL Q+G+ KAE MLH+AL QAQ + YDGITYV+ VLAN+AFE GD K++KL+ VM+R+++ GT + MI +SLKLAR+Y KA G+ FC ++ KT D+D + LWGM+ DW+ ++LL + A +Q A ++ GD H Q++V+LN +GTV L+ + KA+ + S A+ + E +L + VN+G +K+++ EA ACT + +++ + E E++ CL Sbjct: 47 GGLAFLGIFGFGKEDEELEPELITTIKRSILLIQRGEYKKAEQMLHVALHQAQTLQHYDGITYVYDVLANLAFEVGDVEKSKKLFVSVMQRLMSTGTAEGDMKMIHISLKLARLYEISGDPGKAENGYAFCLKHVLEQAKTSPEDEDVLLLWGMTLDWYGKFLLSQSRLPEALKCYQQAHKLCQQVHGDEHEQTVVLLNDLGTVYCLLGEYEKALGHLSDAILIGEKLPEMSDLSSIHVNIGNVYLKRSLYNEARDACTVGLKLAKKNNDIECQEQANACL 327
BLAST of tetratricopeptide repeat vs. nr
Match: gi|817221202|ref|XP_012286118.1| (tetratricopeptide repeat protein 19 homolog, mitochondrial isoform X2 [Orussus abietinus]) HSP 1 Score: 201.445 bits (511), Expect = 2.226e-58 Identity = 113/319 (35.42%), Postives = 182/319 (57.05%), Query Frame = 0 Query: 19 SFAQTRPRRPDPRRFSPPRGPPSGMDAPLVWGFSFTGFLGGLVGLGTDHKGEEDEDFNQLINNIKLGILAQQKGDLDKAEMMLHIALKQAQDINSYDGITYVFTVLANVAFERGDYMKAEKLYKDVMKRILTKGTPQEANSMIEMSLKLARVYASWQQYEKAVLGFKFCSDTQEKKIKTGDTDDDTVALWGMSRDWFAQYLLDRGDYSAAFTQFQGAFLTSCELFGDSHTQSLVILNSMGTVASLMDDNTKAVSYFSKAVRLATT-EEDENLPTYLVNLGMARIKQNMKREALGACTRAQAMGQRSGNREIVEESQHCL 336 S A ++ D R R P + L +GF GL + K EEDE ++LI IK IL QKG+ KAE MLH+AL+QAQ + YD ITY++ +LAN+AF+ GDY KAE L+ VM+R+++ GTPQ +I +SLK+A+ + KA G+KFC T ++ I +G ++D + L M+ DW+A++LL + + A+ F ++ S ++ G H Q++++LN +GTV+S++ + +A+ YF++A + E E+L +NLG I + + A AC + + + N E + E+++CL Sbjct: 29 SHALIHSQKMDRNRQESGRQPFNNKFLLLAFGF---------FGLLNEKKPEEDE--SELIMTIKRSILLTQKGEYKKAEQMLHVALRQAQTLQHYDAITYIYDLLANLAFDMGDYGKAEPLFVSVMQRLISTGTPQNDLKIIHISLKVAKSFQHKGDVRKAEDGYKFCLKTLQEHIDSGTNNEDVMLLRAMTMDWYARFLLSQSRLTEAYKNFLQSYELSVQVNGKVHDQTVILLNDLGTVSSMLGNEDQALEYFTEAAEIGKNLPEMEDLGWIHINLGKLYIIKGLYDAAKKACEKGFLISKARNNEESLAEARNCL 336 The following BLAST results are available for this feature:
BLAST of tetratricopeptide repeat vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of tetratricopeptide repeat vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of tetratricopeptide repeat vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold373_size192110:77698..79202+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold373_size192110-snap-gene-0.34 ID=maker-scaffold373_size192110-snap-gene-0.34|Name=tetratricopeptide repeat|organism=Tigriopus kingsejongensis|type=gene|length=1505bp|location=Sequence derived from alignment at scaffold373_size192110:77698..79202+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'tetratricopeptide repeat' has the following synonyms
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