PREDICTED: uncharacterized protein LOC100372851, maker-scaffold38_size502422-snap-gene-0.15 (gene) Tigriopus kingsejongensis

Overview
NamePREDICTED: uncharacterized protein LOC100372851
Unique Namemaker-scaffold38_size502422-snap-gene-0.15
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of PREDICTED: uncharacterized protein LOC100372851 vs. L. salmonis genes
Match: EMLSAG00000012049 (supercontig:LSalAtl2s:LSalAtl2s85:19923:61705:-1 gene:EMLSAG00000012049 transcript:EMLSAT00000012049 description:"snap_masked-LSalAtl2s85-processed-gene-1.5")

HSP 1 Score: 59.6918 bits (143), Expect = 7.281e-10
Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = 0 
Query:  318 CAQT--RGSNPWVTLDLGQRARMVLQIRIALAE---DEPMVSNMEIRFGNDSEHWKNPLCDWL--DAKRVESSKGTVLDVEPCQHG-GRFLSLASVNSL-VPISLCDIQILVGPLEVLSKQLC 431
            C+QT    ++PW  LDL Q    +  IRI L     D  MV +ME+R GN S +  NP+C +L  D K V  +   V+   PC    GR++SL SVN+    + LC + ILV P + +  + C
Sbjct:  107 CSQTLETDASPWWMLDLLQVVE-ISAIRIVLTHHNFDRIMVESMEVRIGNSSNYQDNPICAFLIQDDKEVNENDTIVI---PCAGARGRYISLNSVNTEPRFLILCKVLILVDPSKYIHPRQC 225
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BLAST of PREDICTED: uncharacterized protein LOC100372851 vs. L. salmonis genes
Match: EMLSAG00000011304 (supercontig:LSalAtl2s:LSalAtl2s77:202020:237124:1 gene:EMLSAG00000011304 transcript:EMLSAT00000011304 description:"maker-LSalAtl2s77-augustus-gene-2.14")

HSP 1 Score: 52.373 bits (124), Expect = 1.807e-7
Identity = 34/119 (28.57%), Postives = 62/119 (52.10%), Query Frame = 0 
Query:  304 AVDERQSAQHGGQFCAQTRG-SNPWVTLDLGQRARMVLQIRIA--LAEDEPMVSNMEIRFGNDSEHWKNPLCDWLDAKRVESSKGTVLDVEPCQHGGRFLSLASVNSLVPISLCDIQIL 419
            AVD +    H G  C +T    +PW T+DL  R+  +  IRI     +D  ++ N EIR G+ +   +NPLC+W+  K +      +++    +  GRF+S++       +S+C++++ 
Sbjct:  115 AVDGKTGTVHEGNKCTETLSEKSPWWTVDL-LRSHSIKYIRITTRCCDDNIVIKNAEIRVGDLTTPSQNPLCNWI-PKALPLGSTEMIECAS-ELSGRFVSISMTGVERVLSICEVEVF 230
The following BLAST results are available for this feature:
BLAST of PREDICTED: uncharacterized protein LOC100372851 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000120497.281e-1037.40supercontig:LSalAtl2s:LSalAtl2s85:19923:61705:-1 g... [more]
EMLSAG000000113041.807e-728.57supercontig:LSalAtl2s:LSalAtl2s77:202020:237124:1 ... [more]
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BLAST of PREDICTED: uncharacterized protein LOC100372851 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of PREDICTED: uncharacterized protein LOC100372851 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold38_size502422supercontigscaffold38_size502422:209..2917 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold38_size502422-snap-gene-0.15-mRNA-1maker-scaffold38_size502422-snap-gene-0.15-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold38_size502422:209..2917-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold38_size502422-snap-gene-0.15 ID=maker-scaffold38_size502422-snap-gene-0.15|Name=PREDICTED: uncharacterized protein LOC100372851|organism=Tigriopus kingsejongensis|type=gene|length=2709bp|location=Sequence derived from alignment at scaffold38_size502422:209..2917- (Tigriopus kingsejongensis)
AGTTCTTTGTTATGGAAGGGGAAAAACTCACCCTCCAGTCAGTTGGTTAG
AGAGCCGGTGTTGGACAAGAAGTCAAGAACTGACAGTCTGAGGGTCTGCA
AAAAGGGCTCCTCATTCAATGTGTTGAGGACTGTGTGTGGAGGTGATCGA
TGAGGTGAGATGGTGGCAGGGTTATGAGTCCGTTCAACCTCAATGCAACC
GGTCTGAATTTCACCATGACCAGAGAGACATTCCTCACCAATCTCTTCGA
TCCGGTGAACGTGGACCCGTCGTTCACAGACCCACCACCCAGCCTAGTCC
ACGTGAATCCGGAGCTTGATTGCGCCAATTGCACAAACGCCACGAGTGAG
TGCCTCAATTGTCACAACAATGATCTCGGACAGGGAGGCGAAAGCATGAA
CCAGGACATCTATTTCCTCCTGGTCATGATTTGCATCAGTTTTCTCCTCC
TCTTCCTCGTGGTCATGTCCATGCACCGGATCATTGACATGTGCTTCAGA
CAAATGGTCAAGTCAGTCAGAAATTCAAATCAAACCACAGTCACCTCAAA
TACCCATTCGCCCACGCAACCTTCAGACATTGTGGTGGGAAGGCGGGAGA
GGACAGGGCGCGGATCCAATTCGCGACATCCGTCCCTGGAAATATTGGCC
GGTAAGACACCAATTACCTTTGGCTCGCAAATATCATGGTGTGGTTGGAT
ATCAATGACTTGGGACCAGCCTCAGGGTGCTCCGGGCTATCGTGCTATAG
TGGTTGGTTGATATCGCCATTGCGACATTCACAGTACTATAGCGCTCTAT
GATTGGAGGTGAAATAAATGTCCTGATAGAGGCATTTCACTTTTTGAGGA
CTAATTGCCCAGTCATTGAAGTTTGATATTATAAAGCCATCAAGACGCTG
TAATATTTTTATCTTGGCTCGAGTAATTAGCGGGGGATTGTCACCAAAAA
CTATGGCCATTGTCTTGTCGCTAGCACTGCCGTCCGATGCAGCTCCCTTT
GAATCCGTCTCATCGCAGCTAGTTAAAGTTCAGATCGTTTTTCATTGATA
CTCATTCCCCTATGGATCACACATATCTGTGTGACAAGCCGACAATTCTT
TGTCAATACCAGTGACCATGTGTCCGCAGTGTCCACAAACTGGCTCTGGT
TTGGGTTTTACGTGCAGAATTCCACGCATTCCGCATCTCGGTGGGAATGG
CAACCATGCATCAGCATGCAACTGTAGCAAATAATCTCAAGGCCTCTTGG
ACAATGTTCTCATTGGTGATTTCTGCCATCATTTGCAGGTATCTTCACGC
TGAGCCGACAGAATACGTCCATGGCCAATATGCTCAACTACACAAACTCA
CTGCCACGCCCTAGTCAACCGTCCACATTGGGTCGCGGAGACCGCCCACC
GCCCTACGATGACCCGCCTCCTTACCACATTGCCATCTCCATAGACAAGG
ATGAGGAGGAGGTAAGGCCAAGTCCAGCCGATTCCCATGTGAGTGCTCCG
AATTTGGCGGCCTCAGCGGCGCCCGCTCCTCCGGCGGTCAGGCCTAAACA
GCCAAGCCAGACTCGATCCACGGCGAATATGGACGAAAGTGTGATTATTA
AGAATGCCAGTGAGCCACCTCCCATAGCTTCGAGTTGTGGCACGTGGTAA
ACCCATAGTCTGTTACAATACTGCATTATCAAAATGGGAAAGAATAAACG
CTTTATTACCTCGAGGATTGGACACTCAACCTAATTACAAATGAATAATG
TAACCACATACAAGCGGTCTCTATAGTGCCACTCCCAAAAGACAAGCCGA
ATTTTGGACTTTGATAAAAGTGAACCACTGCATTCCTTGCCGGCGTCGTT
TAATATCCCAGGTACAATGGACTATACCACGAATATTTCACCAGAAAATC
CGGCTTTCTTTGACCCAATTTGTATTTGAGAGCAGTGTTGTGCGGTTTTC
TTGAACATGGCCGATCAAAGACTGCTTTGGTCCATGGTGATATACTCTTG
GATTGGTCTGAGTACTCAAAATTGTGACCCCATCCAGCCTCCAGTGCCGT
TAGGCGGAAATTTCGCCATTCACACTTATTCTAAGACGAGCATTTTAAGT
TATGTTTGTTACGACGGCTATGTACTAGTGGGACAGAATGAATTTCTATG
TCAAGATGGATTATGGAACGCGGGCGACCCGATTGTGCCTCCCAAGTGCA
CTCTAGATATCACCAAAAACGAGTTTATCCCGGTGATACTCTCCGAAGGC
ACGACAGGCACCAAAGCCGTGGATGAGAGACAATCTGCCCAACATGGAGG
ACAGTTCTGTGCTCAAACCCGCGGATCCAATCCGTGGGTTACTCTTGATC
TGGGACAACGGGCGCGAATGGTGCTTCAAATCCGAATAGCCTTGGCTGAG
GATGAGCCCATGGTGTCCAATATGGAGATTCGCTTTGGGAATGACTCGGA
ACATTGGAAGAATCCACTCTGTGATTGGCTAGACGCTAAGCGAGTGGAAT
CGAGCAAAGGAACTGTTCTTGATGTTGAACCTTGTCAACATGGCGGTCGA
TTCCTGTCCTTGGCCTCGGTCAATTCCCTCGTTCCCATCAGCCTGTGCGA
TATTCAAATCCTGGTGGGACCTTTAGAGGTCTTGAGCAAGCAACTCTGTC
CTCACAATACTGGTGGGATCACCACAAAAATGGGATCTTGTCTTCACTTC
AACCTGAAG
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Synonyms
The feature 'PREDICTED: uncharacterized protein LOC100372851' has the following synonyms
Synonym
Tk05859
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