collagen alpha-1 chain, maker-scaffold38_size502422-snap-gene-2.22 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of collagen alpha-1 chain vs. L. salmonis genes
Match: EMLSAG00000004352 (supercontig:LSalAtl2s:LSalAtl2s229:218536:238930:1 gene:EMLSAG00000004352 transcript:EMLSAT00000004352 description:"maker-LSalAtl2s229-augustus-gene-2.24") HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0 Identity = 594/801 (74.16%), Postives = 651/801 (81.27%), Query Frame = 0
Query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
Y QP SE P QG RGD+GR G PGTPG+PGTPG+PG PGPQP+++PF+NQ+Q+S GG+KGPSPDPFSYMQAQVGPVGPRG+PG QGPPGPQGF G QGE GD G G G GPRGL GL GK+GE GQDGE GP GP+GPPGKRGLPGMPGLPGPKGHRGFPGLDGAKG +GS+GEKGE G+PG +GP GPMGPAGPRGERGREGP G PGLRGIDG+TG PGEPGSIGK GPPGFPGIPG+KGDMG+ GPKGSPGLQGPRG+SG+PG PG+SGKMGPPGKDG NGEKGSPGS GA GP GFPGPRG PGLNGSPGP GPKG +G G DGPKGESGMKGE+GQMGPRGLPGPTG AGRRG RGIRGP+GPPGPLGEPGPPGGRG+PG+DGP+GPKGQSGDRG PG GPKGKHGD GRPG+ GLQGLRG+PGR GP G+PG G RG+PGADGK G +GPQGLQGLPGP G GDKG G PGQ+GNPG G GPRGD G DGL GP GP G G GERG+PG G RGFQG+PG PGK G GKDGEAGLPG +G+ G+QGK+G+RGFPGERG++G PG PG+RGE GG G DGPPG GPKG+PG KGPPGLVGLPG+RG+ GPAG KG GS G GP+GP+GK G+RG QG GP+G PGE G+ GD G PGPAGE GATGMMG+RG GPQG+ GFPGPPGIPG G G RG PG KG QGNPG GGPGEPGP GLTGL G+KG+RGE GPRGESGMMGPPGRPG AG N
Sbjct: 980 YNQPPSEQTTTNPPPLSNQGARGDSGRSGS---------PGTPGLPGTPGVPGMPGPPGPQPDIQPFLNQVQESQGGQKGPSPDPFSYMQAQVGPVGPRGAPGGQGPPGPQGFMGPQGEGGDPGIRGSAGPPGPRGLPGLTGKEGEGGQDGEPGPMGPSGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGNVGSSGEKGEDGAPGPMGPSGPMGPAGPRGERGREGPPGAPGLRGIDGITGPPGEPGSIGKSGPPGFPGIPGAKGDMGSVGPKGSPGLQGPRGESGKPGGPGQSGKMGPPGKDGVNGEKGSPGSPGAHGPPGFPGPRGKPGLNGSPGPPGPKGLSGSPGSDGPKGESGMKGEMGQMGPRGLPGPTGPAGRRGSRGIRGPSGPPGPLGEPGPPGGRGLPGSDGPAGPKGQSGDRGSPGPLGPKGKHGDIGRPGAXGLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKNGDIGPQGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHGPPGPRGDAGKDGLEGPQGPIGYAGSPGERGSPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPGERGSLGPPGPPGVRGETGGTGSDGPPGINGPKGSPGRKGPPGLVGLPGKRGISGPAGVKGERGSPGKPGPEGPQGKIGDRGPQGTIGPIGRPGEVGSPGDHGPPGPAGEPGATGMMGERGPSGPQGLAGFPGPPGIPGPSGSKGSRGFPGGKGLQGNPGPAGGPGEPGPPGLTGLMGAKGSRGESGPRGESGMMGPPGRPGQAGLN 1771 HSP 2 Score: 202.601 bits (514), Expect = 1.126e-52 Identity = 337/933 (36.12%), Postives = 399/933 (42.77%), Query Frame = 0
Query: 266 GFPGTPGMPG---TPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLG---------------------PRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGF---------------------------PGLDGAKGTIGSTGEKGESGSPGSIGPVGPM---------------------------------GPAGPRGE------------RGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGL---------QGPRGDSGRPGRPGESGKMGP---PGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGL---RGSPGRIGPRGQPGKIGPRGE------------PGADGKTGQVGPQGL------------------QGLPG------------------------PMGPPGDKGLTGPPGQDGN---PGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAG------------------LPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLD------------GPPGGPGPKGNPGHKGPPGLVGL---------------PGQRGMPGPAGSKGSSGSQGPVGPDGPRGK------------------------QGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPG 961
G PG PG+PG G PG G + N+ + + A G GPS +GP GPRG G +GPPG G +G G G PPG PGS+G P+G GL G GESG+ G G G GPPGK G+ G G PG G G PG DG KG G GE G+ G G GP GP GPAGP+G+ +G+ G G PG G+ G+ GAPG G IG+PG PG G PG+ G G GP+G GL +GPRG+ G+ G PG G GP GKDG G +G G G+PG +G PGP G+ G G PG G G G+ G G G SGM G+ G+ G RG PG GS G G G+RG G G G PG G +G PG GP G G G RG G AG KG+ G G+PG G QG RG G IGP G+PG++G G+ G G+ G GPQGL +G PG MG G +G +GP G+ G PG PG AG G+PG G +GPPG G G SG RG G G G GMPG G+ G G DG G LPG TG G +G +GS+G GE G G G G +G G PG G PG PG G PG KGPPG GL G G G G +GS G G +GP G GK +G GLQG+TGP GPPG+ G +G+ G+ G GE G G G G+ GP G+ G PGP G G G
Sbjct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core: 174.096 bits (440), Expect = 6.619e-44 Identity = 290/713 (40.67%), Postives = 342/713 (47.97%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGE---------SGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPR---GERGREGPSGPPGLRGIDGMTGAPGEP------GSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQ---GFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGP------------------TGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGR------------------------------IGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGL---------NGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSK 879
G+ G+RG G LG G+ G++G PG G+ G G PG + GP+G GSPG +G PG G G G G G PGPPG++G +G G PG++G G G+ G +GP GP G G PG G PGP G RGF G+ G G G G+ GE+G PG G +G G G R GERG GP GPPG+RG G TG+ G P GS G+ GPPG G+PG +G G G KG RG G+PG G GK+G G G G G PG G+PG G G GA G+ G GP GP+G AG G G G SG KG G G +GL G G+ G RG G RG +G GP G PG G G PG G SGP G G +G G+ G +GK G+ G PG PG +G +G G IG RG G G RGE G GK G +GPQGL G PGP G G++G GP G+ G PG G G +G PG+ GL GPPG GP+GP+GERG GS GP G G PG GK G G G GL G +G G +G G G G G G PG G RGE+G G G PG GP G G GPPGL+G PG RG G G +
Sbjct: 1388 GQSGDRGSPGPLGPKGKHGDIGRPGAXGLQGLRGAPG-----------------------------------RRGPIGRPGSPGKRGDPGADGKNGDIGPQGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHGPPGPRGDAGKDGLEGPQGPIGYAGSPGERGSPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPGERGSLGPPGPPGVRGETGGTGSDGPPGINGPKGSPGRKGPPGLVGLPGKRGISGPAGVKGE------RGSPGKPGPEGPQGKIGDRGPQGTIGPIGRPGEVGSPGDHGPPGPAGEPGATGMMGERGPSGPQGLAGFPGPPGIPGPSGSKGSRGFPGGKGLQGNPGPAGGPGEPGPPGLTGLMGAKGSRGESGPRGESGMMGPPGRPGQAGLNGEPGRQGTSGPPGLHGIKGSSGSRGAEGKRGNPGAPGMPGPEGQKGGVGADGPPGPSGPPGPGGPPGDRGSPGLPGPTGPIGARGPQGSQGERGESGKPGKEGPIGPQGLLGPPGPSGERGERGEEGPMGKPGAPGIGGRPGDKGPPGSAGLMGSPGGPGIPGPPGKTGPSGPTGERGERGSIGPAGVIGPPGMIGKTGPPGLQGPPGLDGGSGAKGSKGHRGLIGLQGLTGPSGPPGDKGPRGESGTNGKPGEPGPRGPPGLDGAIGPPGLLGAPGPRGSQGEEGKR 2059 HSP 4 Score: 141.354 bits (355), Expect = 7.652e-34 Identity = 255/666 (38.29%), Postives = 288/666 (43.24%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGP------PGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQ-AQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHR------------------------------------GFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDG------------MTGAPGEPGSIG------------------KPGPPGFPG------------------------IPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPS------------------GPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKT---------------------GQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPG 772
A G QG RG GR G GRPG G G PG G G GP PGP N+ G+KGP +P GP GPRG G G GPQG G G G+ G PGP GS G +G+ G PGK G+ G+DGE G GP+G G +G G G PG +G G GL G +G G G KGE GSPG GP GP G G RG +G GP G PG G G TG GE G G G GFPG + G+KG G GP+G G+ GP PGRPG++G G PG+ G +G G G G+ G +G G RG PG G PGP G KG G G GP G G G G G GLPGPTG G RG +G +G G G G+ GP G +G+ G GPS G G+ GD+GPPG+AG G G G PG PG G G G G RG G G G PG GKT G G GLQGL GP GPPGDK GP G+ G G PG GPRG PG DG GPPG G GP G +G G
Sbjct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core: 76.2554 bits (186), Expect = 4.685e-14 Identity = 202/521 (38.77%), Postives = 246/521 (47.22%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLG---ETGRPGEMGFPGTPGMPG---TPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVG---PRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPG---------------SLGPRGLSG------------------------LPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRP---GESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAG------------QSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGK 701
PG G +G GR G G PG+ G G G+ G +PG PGP GPQ + G++GP Q +GP+G GSPG GPPGP G G G G+ GP GP G S G RG G L G G G+ G G G GPPG+ G G+ G PG +G G PGL G KG+ GS G +G+ G+PG+ G GP G G G G GPS G PG G PG G PG+PG G +GA GP+GS QG RG+SG+PG+ G G +GPPG G GE+G G G P GAPG+ G PG GP G+AG G+ GP G +G +GE G +GP G+ GP G G+ G G++GP G G G G G RG+ G G +GP GPPG GP+G+ G G+PG PG +G G G IGP G G GPRG G +GK
Sbjct: 1591 PGINGPKGSPGRKGPPGLVGLPGKRGISGPAGVKGERGSPGKPGPEGPQGKI------------GDRGP--------QGTIGPIGRPGEVGSPGDHGPPGPAGEPGATGMMGERGPSGPQGLAGFPGPPGIPGPSGSKGSRGFPGGKGLQGNPGPAGGPGEPGPPGLTGLMGAKGSRGESGPRGESGMMGPPGRPGQAGLNGEPGRQGTSGPPGLHGIKGSSGSRGAEGKRGNPGAPGMPGPEGQKGGVGADGPPGPS---------------GPPGPGGPPGDRGSPGLPGPTGPIGARGPQGS---QGERGESGKPGKEGPIGPQGLLGPPGPSGERGERGEEGPMGKP---------GAPGIGGRPGDKGPPGSAGLMGSPGGPGIPGPPGKTGPSGPTGERGERGSIGPAGVIGPPGMIGKTGPPGLQGPPGLDGGSGAKGSKGHRGLIGLQGLTGPS------GPPGDKGPRGESGTNGKPGEPGPRGPPGLDGAIGPPGLLGAPGPRGSQGEEGK 2058
BLAST of collagen alpha-1 chain vs. L. salmonis genes
Match: EMLSAG00000007459 (supercontig:LSalAtl2s:LSalAtl2s427:195023:201893:-1 gene:EMLSAG00000007459 transcript:EMLSAT00000007459 description:"augustus_masked-LSalAtl2s427-processed-gene-2.0") HSP 1 Score: 281.567 bits (719), Expect = 1.179e-77 Identity = 329/804 (40.92%), Postives = 398/804 (49.50%), Query Frame = 0
Query: 257 GETGRPGEMGFPGTPGMPGTPGMPGPPGP--QPNLEPFINQLQQSAGGEKGP---------SPDPFSYMQAQ---------VGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGA-----KGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDG---------------------MTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGP-----SGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRG---FPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPG 1006
GE G PG G+PG G PG G+ GPPG + N+ P G+KG P+ + G G G+ G +G G +GF G+ G+ GD G PGP G+ PG G+ G G G +G G G RG+PG+ G G KG +G GL G G G G KGESG PG G G GPAG GE+G +G G PGL GI G + G G G G+ G PG PG PG KGD KG G +GP+G SG PG+PG G G G G G+KG+ GS+G PG GFPG GAPGLNG G G G GQ DG G GMKG+ G GP G P G GR +G RG G PG G+ G PG G+ G G G +G G++G PG +G G G +G+ GSPGL G+ PG+ G G PG+ G G PG DG++GQ G +GL GLPG GP G+ G G PG G G G+ G +G PG GL+G G G G G G G GP+G G+ G PG G G G G PG PGE G+EG RG PGE+G +G +G +G PGLDG KG GL GLPG++G GP G G G G G DG +G +G+RG G+ G G PG PG +G PG G G GD G PG G++G GPPG+PG G G G PG G G PG G G PG SG+ G G +G +G+ G
Sbjct: 659 GEKGPPGIDGYPGRNGRPGVMGIQGPPGKPVKGNIGPPGPLGPMGEVGDKGDVGPKGEAGRCPENLALTAGGKGIKGDKGDFGQKGIAGAKGERGEKGERGFPGEIGQKGDRGQPGPFGN---------PGVSGQKGNIGPAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPGVGPPGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGD------KGEFGREGPKGFSGLPGKPGVPGIRGLDGLPGQKGDKGTSGSSGFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQ---DGIPGLPGMKGDTGMRGPDG---PRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPGIGQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGM---PGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPGLEGPKGNPGFPGKPGLSGRDGASGSPGQKGYPGQSGLSGEKGDTGLPGMPGLNGAKGDMGPQGDTGLTGLPGLKGDRGFSGPQGKPG---FPGENGREGPRGMAGIPGEKGDLGD------KGNSGXPGLDGIM----------VKGEKGLPGLPGKQGRSGPPGLMGEKGDDGLPGLDGRQGDKGDRGFNGVKGDRGYPGPPGMRGQPGL------NGMVGAKGDYGLPGLSGIKGDQGPPGLPGIIGEKGNTGFPGKDGVPGIPGQRGEKGNPGLSGIPGPAGQRGLKGDVG 1413 HSP 2 Score: 264.618 bits (675), Expect = 3.252e-72 Identity = 367/981 (37.41%), Postives = 448/981 (45.67%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVG----------------PVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLP-----GKDGESGQDGEGGPQGPTGPPGKRGLPG--------------------------MPGL------------------PGPKGHRGFPGLDGAKG---------TIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSG---------RPGRPGESGKMGPP--------------------GKDGFNGEKGSPGST--------------------GAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGS------AGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGS------------------------------PGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPG---------QTGLPGEQGKEGSRGFPGERGAIGSPGAPG-----LRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGR------------GLPGSKGEQGNPGSVGGPGEP------GPSGLTGLPGSKGARGEPGPRGESGM--------MGPPGRPGLAGRN 1026
G+ G RG G +G G GE G+ G G+ G G+PG PGP+ PF G++G D + + G P GP G G +G PG G G G+ G+ G PG PG G RG GL GKDG +G+ G G +G G G+RG+PG PGL PG KG +G PGL+G G ++G+ GE+G+ GSPG G +G G +G G G +G G + + G G+ GS+G G PG PG+ G+KG GP GSPGL GP+G+ G R GRPG G GPP G G G KG G G G G G RG G G PG +G KG GQ G G G SG KG +G G RG PG G GR G +G +G AG PG +G PG G GM G G SG G G++G G AG G+ GD G G PGL G+RG GR+G G PG+ G +G+ G+ G+ GP+G GLPG G PG +GL G PGQ G+ GT G++G PG DG G PG PG G GE G G PG G G+PG G G G DG GLPG Q GLPG QG++G+ GF G G G PG PG L+GE G PGL G G PG G KG PGL G+PGQ+G P G+ G SG G G DG G++GERGL G+ G GP G PG PG PG +G GA+G G +G PG G+ G G G+PG PG+ G + GLPG KG++G G G PG P GP G+ G+PG KG G+ G G G+ G PG PG GR+
Sbjct: 327 GDMGERGSPGPMGAKGEKGEFGYNGLNGLNGEKGLPGHPGPRGREGPFGPPGPAGQKGDQGR--DGYDGFPGRAGGKGEAVGGPGLPGLSGPEGPPGIKGEKGTPGLSGITGSPGQIGEKGSPGDPGYPGSRGQKGLSIPGPRGKDGYNGRPGNAGLKGERGYTGERGVPGDSLEGTPGPPGPVGPIGEKGRDGQPGRPGLSGGKGDKGFKGGECQLCAPGMKGQKGVPGLNGLDGPPGERGMPGSLGAKGERGDDGSPGVPGRIGDPGQSGRDGTPGTKGDKGADAIVPDYLLKGPKGDKGSMGFSGVPGPPGLSGAKG---MDGPSGSPGLPGPKGEKGPPGIDGYPGRNGRPGVMGIQGPPGKPVKGNIGPPGPLGPMGEVGDKGDVGPKGEAGRCPENLALTAGGKGIKGDKGDFGQKGIAGAKGERGEKGERGFPGEIGQKGDRGQPGPFGNPGVSGQKGNIGPAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPG-VGPPGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGD---KGEFGREGPKGFSGLPGKPGVPGIRGLDGLPGQKGDKGTSGSSG---FPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPGIGQQGLKGEKGEPGLSGKDGFPG---QSGQKGSPGLPGMPGQKGNP---GNPGQSGLPGLPGLDGRSGQKGERGLPGLPGLEGPKGNPGF---PGKPGLSGRDGASGSPGQKGYPGQSGLSGEKGDTGLPGMPGLNGAKGDMGPQGDTGLTGLPGLKGDRGFSGPQGKPGFPGENGREGPRGMAGIPGEKGDLGDKGNSGXPGLDGIMVKGEKGLPGLPGKQGRS 1286 HSP 3 Score: 264.233 bits (674), Expect = 4.125e-72 Identity = 347/845 (41.07%), Postives = 412/845 (48.76%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLP-----------GMPGLPGPKGHRGFP--------------------GLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKG---LTGPPGQDGNPGTPGNAGPRGDPGTDGL--NGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGE------------PGAQGDPGSPGPAGEAGATGMM--GDRGSPGPQGMQGFPGPPGIPGS------PGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSG---LTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNM 1029
PGE+G G G GE G G G PG G PG G G PG + G+KG Y+ GP G +GS G G PGP G G +G G G PG PG G +G G+ G G +G+ G G QGP G P K + G G GPKG G G G G G GEKGE G PG IG +G+RG+ GP G PG+ G G G G+ G G G G PG+ G GD G G G PG+ GP G +G PG G G+ G PG GE+G G G PG +G G G PGLNG G G G G G GP G SG+ G+ G GP G G G GR G +G +G G GP G G PG G+PG G G GQ GD+G G++G GK G G PG+PGL G++G G G PG+ G G PG G TG GP G +GLPG + GD+G L G GQDGNPG G G +G+PG G+ G G G G SG+ G PG G +G G+PG PG+ G+ G G++GLPG GL G G++G RG PG G G G PG G+ G G DG G PG KG PG G G G G GMPG G+KG G QG G G G +G+RG G G G PGE PG +GD G G +G G G+M G++G PG G QG GPPG+ G PG+ G +G G +G G G G PG PG G L G+ G+KG G PG G G GPPG PG+ G N
Sbjct: 562 PGERGMPGSLGAKGERGDDGSPGVPGRIGDPGQSGRDGTPGTK---------------GDKGADAIVPDYLLK--GPKGDKGSMGFSGVPGPPGLSGAKGMDGPSGSPGLPGPKGEKGPPGIDGYPGRNGRPGVMGIQGPPGKPVKGNIGPPGPLGPMGEVGDKGDVGPKGEAGRCPENLALTAGGKGIKGDKGDFGQKGIAGAKGERGEKGERGFPGEIGQ---------KGDRGQPGPFGNPGVSGQKGNIGPAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPGV-GPPGYAGAPGMKGNKGESGLPG---LQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGDKGEFGREGPKGFSGLPGKPGVPGIRGLDGLPGQKGDKGTSGSSGFPGKDGFPGSPGAPGLNGMKGE---FGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPGIGQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPGLEGPKGNPGFPGKPGLSGRDGASGSPGQKGYPGQSGLSGEKGDTGLPGMPGLNGAKGDMGPQGDTGLTGLPGLKGDRGFSGPQGKPGFPGENGREGPRGMAGIPGEKGDLGDKGNSGXPGLDGIMVKGEKGLPGLPGKQGRSGPPGLMGEKGDDGLPGLDGRQGDKGDRGFNGVKGDRGYPGPPGMRGQPGLNGMVGAKGDYGLPGLSGIKGDQGPPGLPGIIGEKGNT 1373 HSP 4 Score: 257.684 bits (657), Expect = 4.647e-70 Identity = 327/788 (41.50%), Postives = 393/788 (49.87%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKG---------PSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGP------------------QGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGA---GGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGS---------PGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGN--------PGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLP---GQRGMPGPAG------------SKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGAT---------GMMGDRGSPGPQGMQGFPGPPGIPGSPG 961
G G +G+ G GE G PGE+G G G PG G PG G + N+ P ++ + G++G D + VGP G G+PGM+G G G G QGE G GP G PG G +G+ GLPG +G G G GP +G GP G+ G PGMPG PG KG +G G +G KG G G+ G G G G G G G G G G G PG G G+ G GE G G PG G PG+PG KGD G GP+G PG +GD G+PG PG G+ G PG DG G KG PG G G QG G +G PGL+G G G G G G G G+ G G GQ G GLPG G +G++G RG+ G G GP G PG PG G+ G DG SG GQ +G PG +G G+ GDTG PG PGL G +G G G +G G GP+G+PG G+ G+ GP+G+ G+PG G GDKG +G PG DG PG PG G G PG G G G PG G G++G G G +G +G PG PG G G +G G G GLPG G +G +G PG G IG +G G PG DG PG PG + G KG PGL G+P GQRG+ G G KG++G GP G G G G G+ G GP+GP PG+ G PG G +G G GM GDRG PG G+QG PG G PG G
Sbjct: 744 GIAGAKGERGEKGERGFPGEIGQKGDRGQPGPFGNPGVSGQKGNIGPAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPGVGPPGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGDKGEFGREGPKGFSGLPGKPGVPGIRGLDGLPGQKGDKGTSGSSGFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPGI-GQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPGLEGPKGNPGFPGKPGLSGRDGASGSPGQ---KGYPGQSGLSGEKGDTGLPGMPGLNGAKGDMGPQGDTGLTGLPGLKGDRGFSGPQGKPGFPGENGREGPRGMAGIPGEKGDLGDKGNSGXPGLDGIMVKGEKGLPGLPGKQGRSGPPGLMGEKGDDGLPGLDGRQGDKGDRGFNGVKGDRGYPGPPGMRGQPGLNGMVGAKGDYGLPGLSGIKGDQGPPGLPGIIGE------KGNTGFPGKDGVPGIPGQR---GEKGNPGLSGIPGPAGQRGLKGDVGLPGQFGPPGIPGPKGNTGLFGPPGLKGNPGPPGLPGIPGQEGPMGPRAIPGSPGVPGIKGSSGRPGFNGPPGPVGLPGMKGDRGFPGQPGLQGRPGIAGDPGQDG 1518 HSP 5 Score: 226.868 bits (577), Expect = 2.387e-60 Identity = 360/1001 (35.96%), Postives = 425/1001 (42.46%), Query Frame = 0
Query: 223 EDPYAPPYEQPDSETPVMVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQG------------PTGPPGKRGLPGMPGL----------------------PGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPA--GPRGERGREGPSGPPGLRGIDGMTGAPGEPGSI-----------------GKPGPPGFPGI------------------PGSKGDMGAGGPK------------GSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPP-----------------GPLGEPGPPG--GR---------------------GMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPP---------GDKGLTGPPGQDGN---------PGTPGNAGPRGDPGTDGLN------------------------------------GPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGG------PGLDGPPGGPGPKGNPGHKGPPGLVGLPGQ------RGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGL--QGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGR---GLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNM 1029
E YA P P + PG GN G PG MG G G PG G G P+ G P P V G + GPPG +G +G GE G GP G G G G +GL G +GE G G GP+G G G+ G G PG PG KG +G PGL G G+ G GEKG G PG G G G + GPRG+ G G G GL+G G TG G PG G+ G PG PG+ PG KG G G GS G +G RGD G PG PG G G G+DG G KG G+ GP+G G G G GP G +G G DGP G G+ G G+ GP G+ G G GR G GI+GP G P G G+ GP G GR G G G G +G+ G+RG PG G KG G G G+PG+ G +G+ G G RG PG G RG PG G+ G G +G GLPG +GPP G+KG +G PG G PG G+ G G PG +G+ G PG PG G G++G G GP+GF G+PG PG G G D GLPGQ G++G GS GFPG+ G GSPGAPGL G G PG DG PG PG KG+ G +GP G GLPG+ RG PG G +G G+ G G G +G+ G G+ QG+ G G PG G G PG G G G GM G +G+PG G G PG PG+ G G G R GLPG +G +GNPG G PG G G +G PG KG G+ G GE G G PG PGL G +M
Sbjct: 220 EPAYARPGAMGQKGEPGLDGLPGSMGN---------PGVPGPMGIKGDRGFPGRDGPKGNQAPKGQKGEMGLAFYGPKGVPGLPGPPGPPGSYEAVTGSGTDXTA-TTGPPGQRGEKGDMGERGSPGPMGAKGEKGEFGYNGLNGLNGEKGLPGHPGPRGREGPFGPPGPAGQKGDQGRDGYDGFPGRAGGKGEAVGGPGLPGLSGPEGPPGIKGEKGTPGLSGITGSPGQIGEKGSPGDPGYPGSRGQKGLSIPGPRGKDGYNGRPGNAGLKGERGYTGERGVPGDSLEGTPGPPGPVGPIGEKGRDGQPGRPGLSGGKGDKGFKGGECQLCAPGMKGQKGVPGLNGLDGPPGERGMPGSLGAKGERGDDGSPGVPGRIGDPGQSGRDGTPGTKGDKGADAIVPDYLLKGPKGDKGSMGFSGVPGPPGLSGAKGMDGPSGSPGLPGPKGEKGPPGIDGYPGRNGRPGVMGIQGPPGKPVKGNIGPPGPLGPMGEVGDKGDVGPKGEAGRCPENLALTAGGKGIKGDKGDFGQKGIAGAKGERGEKGERGFPGEIGQKGDRGQPGPFGNPGVSGQKGNIGPAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPG-VGPPGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGDKGEFGREGPKGFSGLPGKPGVPGIRGLD---GLPGQK---GDKGTSGSSGFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPGIGQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPGLEGPKGNPGFPGKPGLSGRDGASGSPGQKGYPGQSGLSGEKGDTGLPGMPGLNGAKGDM 1203 HSP 6 Score: 223.787 bits (569), Expect = 2.192e-59 Identity = 376/1097 (34.28%), Postives = 458/1097 (41.75%), Query Frame = 0
Query: 202 YEDPYTPPYAPPYEEPYEP-PYEDPYAP-PYEQPDSETP----VMVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLP--GKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGE-------------------------------------SGSPGSIGPVGPMGPA---GPRGERGREGPSGPPGLRGIDGMTGAPGEP------------------GSIGKPGPPGF-------------------------PGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKM-----GPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLN--------------------------------------------GSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPR------GLPGPTGSAGRRGRRG------------------IRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGR-----------------------IGPRGQPGKI-----------------GPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGD---PGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLR------------------------------------GEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQ---------RGMPGPAGSKGSSGSQGPVGPD---------GPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMM---GDRGSPGPQGMQ------GFPGPPGIPGSPGM--MGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRN 1026
+++ Y + P E +P DP P P S V E+G+RG G G G G+ GFPG G+PG G G GPQ + ++ + G G + P +GP GP+G G G G G G G G GP G PG G +G+ G P + G GQ GE G G PG G PG+PG G KG RGFPG DG KG G+KGE +G PG G G MG GP G +G +G G GL G++G G PG P G G+ G GF PGI G KG G G GSPG G +G G PG PG G+ GP GKDG+NG PG+ G G +G+ G RG PG + +PG G KG G +G DGP GE GM G LG G R G+PG G G+ GR G ++GP G G +G G PG G+ GA G GP G G GP G GP G G GR G PG+ G++G PG+ +GP+G+ G+ G G+ G G G+ G +G +G PG +G GD+G GP G G G GN GP GD PG+ G G PG G G G++GT G PG G PG G G G GE+GLP GL GEQG+ G GFPGE+G G G PGL G G PG+ G PG G KG G +GP G GLPG+ G+PG G KG+SGS G G D G G +GE G+ G+ G G PG PG +GD G GP G G G + GDRG PG G+Q GF G G+ G PG+ +G +GL G KGE G G G PG+ G G GLPG G +G PG G+SG+ PG PGL GR+
Sbjct: 56 FDNSYDNYFRRPGEYESDPFSRRDPVVPEPKRNCGSNCEGGGCVGKRCVAEKGSRGPPGIPGPHGDKGQRGFPGMEGLPGPKGTKGETGPQGTMGYKGDRGKMGVPGYPGVNGVP-----GLLGPSGPKGDLGRDGCNGTDGLSGGPGMPGLPGPRGFPGLPGIKGIKGEPAYARPGAMGQKGE---PGLDGLPGSMGNPGVPGPMGIKGDRGFPGRDGPKGNQAPKGQKGEMGLAFYGPKGVPGLPGPPGPPGSYEAVTGSGTDXTATTGPPGQRGEKGDMGERGSPGPMGAKGEKGEFGYNGLNGLNGEKGLPGHPGPRGREGPFGPPGPAGQKGDQGRDGYDGFPGRAGGKGEAVGGPGLPGLSGPEGPPGIKGEKGTPGLSGITGSPGQIGEKGSPGDPGYPGSRGQKGLSIPGPRGKDGYNGR---PGNAGLKGERGYTGERGVPGDSLEGTPGPPGPVGPIGEKGRDGQPGRPGLSGGKGDKGFKGGECQLCAPGMKGQKGVPGLNGLDGPPGERGMPGSLGAKGERGDDGSPGVPGRIGDPGQSGRDGTPGTKGDKGADAIVPDYLLKGPKGDKGSMGFSGVPGPPGLSGAKGMDGPSGSPGLPGPKGEKGPPGIDGYPGRNGRPGVMGIQGPPGKPVKGNIGPPGPLGPMGEVGDKGDVGPKGEAGRCPENLALTAGGKGIKGDKGDFGQKGIAGAKGERGEKGERGFPGEIGQKGDRGQPGPFGNPGVSGQKGNIGPAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPG----VGPPGYAGAPGMKGNKGESGLP---GLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGDKGEFGREGPKGFSGLPGKPGVPGIRGLDGLPGQKGDKGTSGSSGFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPGIGQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGL---PGLPGLDGRS 1131 HSP 7 Score: 217.238 bits (552), Expect = 2.439e-57 Identity = 305/732 (41.67%), Postives = 361/732 (49.32%), Query Frame = 0
Query: 238 PVMVDAPGEQGNRGDAGR---LGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQ---QGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRG------IDGMTGAPGEPG-----SIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQG------FPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGM------KGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGD---PGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDG------EAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAG 931
P APG +GN+G++G GE GR G GFPG G G G+PG G + + Q P P + GP G GSPGM G PG +G +G+ +G G G PG PG G RGL GLPG+ G+ G G +G PGK G PG PG PG G +G G++G G G G G G G GP GP G G E+G G G PGL+G DG+TG GEPG G G G PG+ G G G G KGSPGL G G G PG PG+SG G PG DG +G+KG G G PG +G FPG G G +G+ G G KG GQSG G KG++G+ G G MGP+G G TG G +G RG GP G PG GE G G RGM G G G G G+ G PG G K G+ G PG PG QG G PG +G +G G PG DG+ G G +G G+ G D+G GPPG G PG G G +GD PG G+ G GPPG G GE+G G PG G G+PG G+ G+ G G + GL G GLPG+ G G G G G G PGL G PG PG G PG +GP G +PG G+PG GS G G GP GP G G +G+RG PG+PG QG PG G G+ G
Sbjct: 829 PGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGP--PGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGDKGEFGREGPKGFSGLPGKPGVPGIRGLDGLPGQKGDKGTSGS------SGFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPGIGQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPGLEGPKGNPGFPGKPGLSGRDGASGSPGQKGYPGQSGLSGEKGDTGLPGMPGLNGAKGDMGPQGDTGLTGLPGLKGDRGFSGPQGKPGFPGENGREGPRGMAGIPGEKGDLGDKGNSGXPGLDGIMVK-GEKGLPGLPGKQGRSGPPGLMGEKGD------DGLPGLDGRQGDKGDRGFNGVKG------DRGYPGPPGMRGQPGLNGMVGAKGDYGLPGLSGIKGDQGPPGLPGIIGEKGNTGFPGKDGVPGIPGQRGEKGNPGLSGIPGPAGQRGLKGDVGLPGQFGPPGIPGPKGNTGLFGP------------PGLKGNPGPPGLPGIPGQEGPMGPRAIPGSPGVPGIKGSSGRPGFNGPPGPVGLPGMKGDRGF---------PGQPGLQGRPGIAGDPGQDG 1518 HSP 8 Score: 183.341 bits (464), Expect = 7.386e-47 Identity = 247/588 (42.01%), Postives = 293/588 (49.83%), Query Frame = 0
Query: 248 GNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPG----PQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSG---RPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMG------------PPGDKGLTGPPG---------------QDG------NPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKD 795
G +GD G G +G PG+ GFPG+PG PG GM G G P + P + ++ G P A+ G G G PG+QG G GF G G G+ G PG +G +GL G G+ G SG+DG G G G PG G+PG G PG G G PGL G G G GE+G G PG GP G G G G GR+G SG PG +G G +G GE G G PG PG G G G G G G PGL+G RG SG +PG PGE+G+ GP G G GEKG G G G PGL+G + KG G G G +G SG G +G+ G GLPG G R+G +G RG G G G PGPPG RG PG +G G KG D G PG +G KG D G PG PG+ G +G+ G G G PG G RGE G G +G GP G +GL G +G P G+ GL GPPG Q+G PG+PG G +G G G NGPPGP G G G+RG PG P G QG PG G G +G+D
Sbjct: 962 GQKGDKGTSGSSGFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPG----IGQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPGLEGPKGNPGFPGKPGLSGRDGASGSPGQKGYPGQSGLSGEKGDTGLPGMPGLNGAKGDMGPQGDTGLTGLPGLKGDRGFSGPQGKPGFPGENGREGPRGMAGIPGEKGDLGDKGN---------SGXPGLDG----IMVKGEKGLPGLPGKQGRSGPPGLMGEKGDDGLPGLDG---RQGDKGDRGFNGVKGDRGYPGPPGMRGQPGLNGMVGAKG---DYGLPGLSGIKG---DQGPPGLPGIIGEKGNTGFPGKDGVPGIPGQRGEKGNPGLSGIPGPAGQRGLKGDVGLPGQFGPPGIPGPKGNTGLFGPPGLKGNPGPPGLPGIPGQEGPMGPRAIPGSPGVPGIKGSSGRPGFNGPPGPVGLPGMKGDRGFPGQP---GLQGRPGIAGDPGQDGQD 1520 HSP 9 Score: 138.272 bits (347), Expect = 5.292e-33 Identity = 218/573 (38.05%), Postives = 260/573 (45.38%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQ----------PNLEPFINQLQQSAGGEKGPSPDPFSYMQAQ-----VGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLG------PRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPG------LDGAKGT---------IGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQG--PRGDSGRPGRPGESGKMGPPGK------------DGFNGEKGSPGSTGAPGPQGFPGP---RGAPGLNGS------------------------PGPLGPKGTAGQSGRDG---------------------PKGESGMKGELG---QMGPR---------GLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQV 705
+PG G G G G G PG+ G PG PGM G GM GP GP+ +P + LQ G P D + ++ + +G G +G G G G GF GQ G+ G G PG PG G GL GLPG DG SGQ GE RGLPG+PGL GPKG+ GFPG DGA G+ G +GEKG++G PG G G G GP+G+ G G G G RG G G PG PG G+ GP G GIPG KGD+G G G PGL G +G+ G PG PG+ G+ GPPG DG G+KG G G G +G+PGP RG PGLNG PG +G KG G G+DG P G+ G+KG++G Q GP GL GP G G G G+ G G GP+G PG G+PG G SG G +G GP G G K GD G PG PGLQ GR G G PG+ G P + TG +
Sbjct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
BLAST of collagen alpha-1 chain vs. L. salmonis genes
Match: EMLSAG00000007460 (supercontig:LSalAtl2s:LSalAtl2s427:202770:210042:1 gene:EMLSAG00000007460 transcript:EMLSAT00000007460 description:"maker-LSalAtl2s427-augustus-gene-2.11") HSP 1 Score: 272.322 bits (695), Expect = 1.031e-74 Identity = 349/945 (36.93%), Postives = 427/945 (45.19%), Query Frame = 0
Query: 247 QGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQ-----SAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQ-----QGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGE--------GGPQGPTGPPGKRGLPGMPGLPGPKGH----------------------RGFPGLDGAKGTIGSTGEKGESG---SPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKG--------------------DMGAGG---PKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGT------------AGQSGRDGPKGESGMKGELGQMGPRGLPGP-------TGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGP--------KGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGR---------------IGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGP--------------------PGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTG---------------------LPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQ-----RGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSP---GPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLT--GLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNMIIY 1032
+G +G +G+ G G PG+ G G G+PG PG G GP +P + + + + G E P D G G +G PG G PG QG +G +GEAGD GP G PG G +G+ G PG G+ G +GE G G G PG+ G+ G G PG KG+ G PGLDG +G GS G+KG+ G +G G G G G +G +G G PG RG G+ G G G G+ GPPG G+ G KG D+G GG +GS GLQGP G+ G PG PG F G KG PG+ GAPG PG+NG PGP GP G G G +G KG G KG G+ G +G P P G G +G G G + G G G PG +G G +G GP +G +GD G G G G+ GD+G G GL+GL+G PG IGP+G G G +G PG+DG G G +GL+G PG G PG++G+ G PG G+PG PG G G G GL G PG PG G G +G G PG G +G+PG G G NG G GLPG G LPG+QG G +G+PG+ G IG GAPG + G G G PG PG G PG G PGL+G+ G G G GS+G +G G G G +G+ GE GL G+ G G G PG +G PG P G GE G G G +G PGP G PG GIPG PG+ G GL G G G G G G+ G GL+ G KG G PGP G GM G G PG+ G N Y
Sbjct: 307 KGLKGSSGKYGRPGIPGKEGMIGEQGIPGRPGRQGEVGPTGIFDPNLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGEPGTPGVQGRRGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPGDQGDEGETVYGPPGLAGXDGSDGIPGEDGVRGDIGFPGLKGYPGRGRPITGPTGEQGRQGYPGPSGLPGLDGLEGLKGSFGDKGDDCPFCQNGLVGEKGEEGTNGSXGYKGVQGFPGWPGFRGNKGIKGYMGIKGWPGQSGPPGMSGLEGGKGYKGDQGSLLGLENTIAGEIGDLGVGGFPGLQGSKGLQGPFGNPGIPGLPG------------FKGMKGGPGTYGAPG---------RPGMNGQPGPQGPVGADIYLNPYEITELTGDIGFEGQKGIKGQKGPYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPGEKGQLGYEGEQGPPQWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGIPGRKGYPGSDGIEGSAGYKGLKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGSNGREGLPGIKGMQGDNGMQGLPGLPGVIGQPGLVGRMGIDGEKGGPGLFGLPGKQGFNGMKGYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGRPGPDGMPGLMGMKGDDAYIIAGNQGIKGSRGQNGYFGMPGTTGRKGEMGENGLPGLQGYRGDDGIPGLKGYPGLPGQMGTKGEEGDYGFEGLKGRPGPYGE---PGLEGIPGKPGIFGQVGLRGEAGNDGFKGRRGMEGDVGERGLSAGADEGEKGNIGLPGPDGFPGMXGDEGFPGVQGVKGNSGTY 1227 HSP 2 Score: 269.626 bits (688), Expect = 7.806e-74 Identity = 344/893 (38.52%), Postives = 423/893 (47.37%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGF------PGTPGMPGTPGMPGPPGPQ------PNLEPF-INQLQQSAG--GEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQG-FQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGP--QGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDG---AKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPG--------------------IPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPK------------GESGMKG---ELGQMGPRGLPGPTGSAGRRGRRGIRGP---AGPPGPLGEPGPPGGRG-----MPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPS--GERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMG--------------DRGSPGPQGMQGFPGPPGIPGSP------------------GMMGGRGLPGSKGEQGNPGSVGGP---------GEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNM 1029
PG QG++G G G G PG GF PGT G PG PGM G PGPQ L P+ I +L G G+KG ++ Q GP G G+ G PP G++G G+ G PG + G RG +G PG+ G+ G +GE GP G G G G PG+ G+ G G RG G+DG KG G GE+G G G G +GP G G GR+G G G+ G G G G PG+ G+PG G G +PG GD GA G G PG +G G G PG PG G +G GK G GS G G PG +G G G GL G PG +G G G+ G DG K G +GMKG + G++G RG PG G G RG G AG PGP G PG G +G + G G G +GQ+G G PG G KG+ G+ G PG G +G G PG G G PG++G +GE G G +GL+G PGP G PG +G+ G PG G G G AG G G G+ G G G + + GE+G G PGP GF GM G G G G G +G G+ GLPG G +G++G +RGA G G PG + +DG PG G GN G G G+ G PG GM G G+KG G G DG RG G G+ G G G PG G +GD G PG GE G G+ G G PG +GM+GF G PG PG P G++G GLPGS G G PG +G G+PGP + GLPG G +G+ G G G G G PG G++ ++
Sbjct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core: 254.218 bits (648), Expect = 5.938e-69 Identity = 323/841 (38.41%), Postives = 385/841 (45.78%), Query Frame = 0
Query: 287 PNLEPFINQLQQSAGGEKGPS-PDPFSYMQAQVGPV--GPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTG---PPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGS--KGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGK-----MGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPG----LNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKG--------------------KHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGD---------KGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPP-------GPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDG--EAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPV-----------GPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGL---------------------------------PGSKGARGEPGP---RGESGMMGPPGRPGLAGR 1025
PN E + + +Q G GP D + + A V + G +G G +G G G +G QG GD G G G G +G+ G PG G+ G+ G GP GP G GK G PG+PG G G +G PG G +G +G TG P ++ G +G G +G G G G PG G+ G G GEPG G PG G GIPG KG+ G GPKG PG G +G G PG PG+ G GPPG G +G G PG G G GFPG +G PG + G G G +G G SG G G G+KG G G G G +G G G G G G PG PG RG G G G KG G GPPG +G +G + GD G G PGLQG +G G G G PG G +G G G G G G+ G PGP GP G LTG G +G G G GP G+ G G PP G G G G+ G + G RGF G PG G+ G+ G+ G + GLPG G G+ G G G+ GERG G G GL+G G PG G G GN G GP G G+PG++G PG G +GS+G +G G G G+ G RG+ G G + G G PG GDPG+PG GE G G G RG PG G G G G G PG G GLPG KG QG+ G G PG PG G GL PG G RG PG +GE+G G PG PG+AGR
Sbjct: 207 PNSESYKYKGEQGEVGIPGPRGDDTITEIVADVSVIYKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKGLKGSSGKYGRPGIPGKEGMIGEQGIPGRPGRQGEVGPTGIF----DP-NLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGEPGTPGVQGRRGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPGDQGDEGETVYGPPGLAGXDGSDGIPGEDGVRGDIGFPGLKGYPGRGRPITGPTGEQGRQGYPGPSGLPGLDGLEGLKGSFGDKGDDCPFCQNGLVGEKGEEGTNGSXGYKGVQGFPGWPGFRGNKGIKGYMGIKGWPGQSGPPGMSGLEGGKGYKGDQGSLLGLENTIAGEIGDLGVGGFPGLQGSKGLQGPFGNPGIPGLPGFKGMKGGPGTYGAPGRPGMNGQPGPQGPVGADIYLNPYEITELTGDIGFEGQKGIKGQKGPYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPGEKGQLGYEGEQGPPQWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGIPGRKGYPGSDGIEGSAGYKGLKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGSNGREGLPGIKGMQGDNGMQGLPGLPGVIGQPGLVGRMGIDGEKGGPGLFGLPGKQGFNGMKGYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGR 1042 HSP 4 Score: 252.292 bits (643), Expect = 2.706e-68 Identity = 352/977 (36.03%), Postives = 429/977 (43.91%), Query Frame = 0
Query: 243 APGEQGNRGD-----AGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGP-QGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQD---------GEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTG------------EKGESGS--------PGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPG------------------SKGDMGAGGPKGSPGLQGPRGDSGRPGRP-------------GESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAP--GLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGS-----------------PGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGP---PGDKGLTGPPGQDGNPGTPGNAGPRG---------------------------------DPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGF---QGMPGAPGKAGHN--------------GKDGEAGLPGQTG---------LPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRG-----KQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATG------------------MMGDRGSPGP---------------QGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGN-----PGSVGGPGEPGPSGLTGLPGSKGARGE---PGPRGESGMMGPPGRPGLAGRN 1026
PG QG RG G G+ G G GFPG GM G PG+PG G + L G + P D G G G PG++G PG + G GE G G PGP G G GL GL G G+ G D GE G +G G G +G+ G PG PG +G++G G G KG G +G KG+ GS G IG +G G G +G +G +GP G PG+ G+ G G G PG+ G PG PG G PG GD+G G KG G +GP G+ G G P G G+MG PG G++G G G G G+ G +G P GL G G G G G G G +G+SG+ GE G G +G+PG G RG+ G +G GP G G PG +G PG+DG G G G +G PG G G G G G PG+ G G+PG G G+ G G RG+PG G+ G VG +G QG+PG G PG KG+ G G G PG PG G G DPG G G PG G +GERG PG+PG G GMPG G G + G++G G+PG TG LPG QG G G PG +G G PG G +GE G G +G G PGP G PG +G PG G+ GQ G+ G AG+ G G +G G G RG +GE+G G+ GP G PG G +G PG G G +G G GDRG PG G G PG G+ G PG+ G GL G+KGE+G+ G G PG PG +G GLPG +G RG+ PG +GE G MG G P L G N
Sbjct: 397 TPGVQGRRGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPGDQGDEGETVYGPPGLAGXDGSDGIPGED---------GVRGDIGFPGLKGYPGRGRPITGPTGEQGRQGYPGPSGLPGLDGLEGLKGSFGDKGDDCPFCQNGLVGEKGEEGTNGSXGYKGVQGFPGWPGFRGNKGIKGYMGIKGWPGQSGPPGMSGLEGGKGYKGDQGSLLGLENTIAGEIGDLGVGGFPGLQGSKGLQGPFGNPGIPGLPGFKGMKGGPGTYGAPGRPGMNGQPGPQGPVGADIYLNPYEITELTGDIGFEGQKGIKGQKGPYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPGEKGQLGYEGEQGPPQWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGIPGR---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-PSLRGMN 1360 HSP 5 Score: 247.669 bits (631), Expect = 7.021e-67 Identity = 360/1011 (35.61%), Postives = 435/1011 (43.03%), Query Frame = 0
Query: 226 YAPPYEQPDSETPVMVDAPGEQGNRGDAGRLGETGRPGEM------------------------GFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDP-FSYMQAQVGPVGPRGSPGMQGPPGPQGFQ--GQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEG----------------------------GPQGPTGPPGKR-----------------------GLPGMPGLPGPKGHRGFP---------GLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGF--PGIP--GSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSP-----GSTGAPGPQGFPGPRGAPGLNGSPG-----------PLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPG----PTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQG-LQGLPGPM-------------GPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTD------GLNGPPGPPGPT------------------------------GPSGERGTPGSP----------------------------GPRGFQGMPGAPGKAGHNGKDG--EAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPV-----------GPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEP---------GPRGESGMMGPPGRPGLAGR 1025
++P P S P G G+ G +G G+TG PGE+ G G G+PG GMPG PG ++ P + G G P FS GP G RG PG+ G G G G +GE G +G PGP G G + SG G GE G G G QG G PG R G G GL G KG++G+ G +GAKG IG+ G +G+ G P GP GP+GP G +G G+ G G PG G+ G G PG PG G+ GP G P + G G +GA G +G PG G G +G G G G+ G PG G G +G P G G GP+G+PG GA G+ G+PG GP G AG G DG GE G++G++G G +G PG TG G +GR+G GP+G PG G G G G G D P G G++G G G G G G PG PG +G +G G +G +G PG+ GP G G +G G G QG L GL + G G KGL GP G G PG PG G +G PGT G+NG PGP GP GP GE G G P G RGF G PG G+ G+ G+ G + GLPG G G+ G G G+ GERG G G GL+G G PG G G GN G GP G G+PG++G PG G +GS+G +G G G G+ G RG+ G G + G G PG GDPG+PG GE G G G RG PG G G G G G PG G GLPG KG QG+ G G PG PG G GL G G GE G +G +GM G PG PG GR
Sbjct: 10 FSPXXGCPRSGPPCRCSGKGVTGHPGLSGMRGQTGPPGEVGPDGPSGPKGQKGDYGSSGNMGEKGIRGDTGVPGFRGMPGIPGVSGDIGPKGIEGLSGCNGTNGCDGIPGFSGSHGARGPQGIRGFPGIAGEAGDGGLNSPGIKGERGVNGQPGPHGIDGRQ--SGSTGSKGERGDFGLPGRPGPPGEPGYHGDFGDTIPNSESYKYKGEQGEVGIPGPRGDDTITEIVADVSVIYKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKP---GPAGPVGPKGLKGSSGKYGRPGIPGKEGMIGEQGIPGRPGRQGEVGPTGIFDPNLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGEPGTPGVQGRRGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPGDQGDEGETVYGPPGLAGXDGSDGIPGEDGVRGDIGFPGLKGYPGRGRPITGPTGEQGRQGYPGPSGLPGLDGLEGLKGSFGDKGDDCPFCQNGLVGEKGEEGTNGSXGYKGVQGFPGWPGFRGNKGIKGYMGIKGWPGQSGPPGMSGLEGGKGYKGDQGSLLGLENTIAGEIGDLGVGGFPGLQGSKGLQGPFGNPGIPGLPGFKGMKGGPGTYGAPGRPGMNGQPGPQGPVGADIYLNPYEITELTGDIGFEGQKGIKGQKGPYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPGEKGQLGYEGEQGPPQWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGIPGRKGYPGSDGIEGSAGYKGLKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGSNGREGLPGIKGMQGDNGMQGLPGLPGVIGQPGLVGRMGIDGEKGGPGLFGLPGKQGFNGMKGYPGDPGEIGR 1015 HSP 6 Score: 244.973 bits (624), Expect = 5.619e-66 Identity = 326/857 (38.04%), Postives = 389/857 (45.39%), Query Frame = 0
Query: 221 PYEDPYAPPYEQPDSETPVMVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGD---HGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQ---------GPTGPPGKRGLPGMPG-----------------LPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGP-----LGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQ--------------------PGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGP---RGESGMMGPPGRP 1020
PY + A P S +V G +G G G G G G PG G G G GPP Q G +G + DP + +G +G RG G+ G G +G +G GE G G G G++GP+G G+PG+ G G DG G G TG PG RG+ G G LPG G G PG G G G G +G+ G+PG +G VG G G G GREG G G++G +GM G PG PG IG+PG G GI G KG G G G G G + G PG PGE G+ G PG GE G G G PG G PGP G PGL G G G +G G G++G G G G G+MG GLPG G G G G++G G PG +G G G G G G GP G+ G G PG G G+ G G G+ G +G RG G +G RG PG G G PG G G G G GLPG MG G KG G G G PG+ N G+PG +G NG G P G +G G PG G G+ G G+ G +G DGE G G G+PG G++G G+ G+RG G PGL+GE G G++GP +G G G PGL G PG GM G G G G G G G G G GL+G+ G G PG G G PG G G GA G +G PGP +PG PG+ G +G G G G PG G PG G SG G PG GA G PG RG +GPP +P
Sbjct: 704 PYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPGEKGQLGYEGEQGPP-------------QWGLPGLEGYAGDPG--INGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGIPGRKGYPGSDGIEGSAGYKGLKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGSNGREGLPGIKGMQGDNGMQGLPGLPGVIGQPGLVGRMGIDGEKGGPGLFGLPGKQGFNGMK---GYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGRPGPDGMPGLMGMKGDDAYIIAGNQGIKGSRGQNGYFGMPGTTGRKGEMGENGLPGLQGYRGDDGIPGLKGYPGLPGQMGTKGEEGDYGFEGLKGRPGPYGEPGLEGIPGKPGIFGQVGLRGEAGNDGFKGRRGMEGDVGERGLSAGADEGEKGNIGLPGPDGFPGMXGDEGFPGVQGVKGNSGTYGRPGLPGYMGMKGTKGDRGAYGDRGIPGSSPNYKVDGEPGENGRNGNYGRP------GLKGMKGKPGLFGMDGLQGNKGERG-DGADGERGDDGFPGIPGXAGQDGLPGYQGDRGDF---GMPGLKGEMGRMGINGPS----LRGMNGESGRPGLYGGPGFEGMKGFMGDPGFPGIPGIPGMKGXPGYFGPPGLEGLLGKPGLPGSSGLMGQPGEIGSQGVPGAPGFIGQ------------PGPQNMPGLPGVDGFKGKNGDNGRDGFPGIQGVPGTKGKSGDVGFPGEGGAIGSPGIPGRRGSDAPLGPPPKP 1516 HSP 7 Score: 243.432 bits (620), Expect = 1.547e-65 Identity = 337/898 (37.53%), Postives = 405/898 (45.10%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQ--GQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQ---------------DGEGGPQGPTGPPGK-RGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFN-GEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGM-----KGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPG----------AAGPKGKHGDTGRPG---SPGLQGLRGSPGRIGPRG------QPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKG---LTGPPGQDGNPGTPG--------------------NAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPG---APGKAGHNGKDGEAG---------------LPGQTGLPGEQGKEGSRGFPGERGAIGSP----------GAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPG--QRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPG------AQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGE--------------QGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRN 1026
G++G+ G +G +GE G G+ G PG GMPG PG+ G GP+ I L G FS GP G RG PG+ G G G G +GE G +G PGP G G + SG G GE G G+ G P K +G G G+PGP+G + I KGE G G G +G G G +G G G SG G G G+ GAPG G GKPGP G G G KG G G G PG +G G+ G PGRPG G++GP G N E+G G+ GA G +GFPG G+PG NG G G KG G+ G G +G G+ KGE G GP+G PG G+ G +G G+ G G G GPPG G G+DG G G GD G PG GP G+ G G PG PGL GL G G G +G Q G +G +GE G +G G G QG G PG G G KG + G PGQ G PG G AG GD G G G G G GP G G PG PG +G +G PG APG+ G NG+ G G L G G G++G +G +G GE GA G P G G +GE G PG G G G PG KG G G G Q G+PG G G G G +G G RG G G QG+ G G PGE G G+ G+ GP G+ G G G GS G +G G+ G G PG+ G G RG+ G G+ G PG G PG PG +G G G G RG+PG G G++G G+ G+ G N
Sbjct: 59 GQKGDYGSSGNMGEKGIRGDTGVPGFRGMPGIPGVSGDIGPKG-----IEGLSGCNGTNGCDGIPGFSGSHGARGPQGIRGFPGIAGEAGDGGLNSPGIKGERGVNGQPGPHGIDGRQ--SGSTGSKGERGDFGLPGRPGPPGEPGYHGDFGDTIPNSESYKYKGEQGEVGIPGPRGDDTITEIVADVSVI----YKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKGLKGSSGKYGRPGIPGKEGMIGEQGIPGRPGRQGEVGPTGIFDPNLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGEPGTPGVQGRRGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPGDQGDEGET-VYGPPGLAGXDGSDGIPGEDGVRGDIGFPGLKGYPGRGRPITGPTGEQGRQGYPGPSGLPGLDGLEGLKGSFGDKGDDCPFCQNGLVGEKGEEGTNGSXGYKGVQGFPGWPGFRGNKGIKGYMGIKGWPGQSGPPGMSGLEGGKGYKGDQGSLLGLENTIAGEIGDLGVGGFPGLQGSKGLQGPFGNPGIPGLPGFKGMKGGPGTYGAPGRPGMNGQPGPQGPVGADIYLNPYEITELTGDIGFEGQKGIKGQKGPYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPGEKGQLGYEGEQGPPQWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGIPGRKGYPGSDGIEGSAGYKGLKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGSN 944 HSP 8 Score: 199.519 bits (506), Expect = 7.851e-52 Identity = 269/694 (38.76%), Postives = 315/694 (45.39%), Query Frame = 0
Query: 402 KGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGF--PGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESG---------------MKGELGQMGP-------RGLPGPTGSAGRRGRRGIRGPAGPPGPL--GEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPP-GQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGA--PGKAGHNGKDGEAGLPGQTG------LPGEQGKEGSR-----GFPGERGAIGSPGAPGLRGEAGGPGLDGPPGG----PGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPG---PQGMQGFPGPPG--------------IPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNMIIYDC 1034
KG G PGL G +G G GE VGP GP+GP+G++G G SG G +GI G TG PG G PGIPG GD+G PKG GL G G +G G PG SG G G G +G PG G G G PG +G G+NG PGP G G QSG G KGE G G+ G P +G G G G RG I + GE G G +G G G G +G GDRG G G G G G PG G G G G +GP+G G G G PG GK G +G QG+ G PG G G G+ P ++G G G G G PG DG G G G G GE G PG+PG +G +G+PG G+AG +G G G PG G LPG+QG EG G G G+ G PG G+RG+ G PGL G PG GP G G +G PG GLPG G+ G GS G G P +G G++GE G G G G QG PG PG G G G MG +G PG P GM G G G I G G +G G PG +G +G G G PG P GL G G KG G G G GM G PG G G ++ + Y+
Sbjct: 28 KGVTGHPGLSGMRGQTGPPGE------------VGPDGPSGPKGQKGDYGSSGNMGEKGIRGDTGVPGFRG---------MPGIPGVSGDIG---PKGIEGLSGCNGTNGCDGIPGFSGSHGARGPQGI---RGFPGIAGEAGDGGLNSPGIKGERGVNGQPGPHGIDGR--QSGSTGSKGERGDFGLPGRPGPPGEPGYHGDFGDTIPNSESYKYKGEQGEVGIPGPRGDDTITEIVADVSVIYKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKGLKGSSGKYGRPGIPGKEGMIGEQGIPGRPGRQGEVGPTGIFDPNLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGEPGTPGVQGRRGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPGDQGDEGETVYGPPGLAGXDGSDGIPGEDGVRGDIGFPGLKGYPGRGRPITGPTGEQGRQGYPGPSGLPGLDGLEGLKGSFGDKGDDCPFCQNGLVGEKGEEGTNG------SXGYKGVQGFPGWPGFRGNKGIKGYMGIKGWPGQSGPPGMSGLEGGKGYKGDQGSLLGLENTIAGEIGDLGVGGFPGLQGSKGLQGPFGNPGIP---GLPGFKGMKGGPGTYGAPGRPGMNGQPGPQGPVGADIYLNPYEI 683 HSP 9 Score: 184.882 bits (468), Expect = 2.584e-47 Identity = 245/614 (39.90%), Postives = 287/614 (46.74%), Query Frame = 0
Query: 234 DSETPVMVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFI-------------NQLQQSAGGEKGPSPDP----------FSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDH-----GPPGPPGSLGPRGLSGLPGKDGESGQDGEG------GPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGE---KGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGA-PGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDS---GRPGRPGESGKMGPPGKDGFNGEKGSPGST------GAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLR------------------GSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGP---MGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGF 779
D TP + G +G +G G G G PG G G GM G PG+PG G QP L + +Q G KG DP + + + G G G+PGM G PGP G G G GD G G GS G G G+PG G G+ GE G +G G PG +G PG+PG G KG G G +G KG G GE +G G PG G VG G AG G +GR G G G RG+ GA GE G+IG PGP GFPG+ G +G PG+QG +G+S GRPG PG G G G G G++G PGS+ G PG G G G PGL G G G G G G G +G+ G GE G G G+PG G G G +G RG G PG GE G G G P G +G G+ G G PG G KG GD G PG PG+ G++ G PG G GQPG+IG +G PGA G GQ GPQ + GLPG G GD G G PG G PGT G +G G PG G G PG PG G G P P P+GF
Sbjct: 922 DPGTPGRMGLVGLKGKQGIPGSNGREGLPGIKGMQGDNGMQGLPGLPGVIG-QPGLVGRMGIDGEKGGPGLFGLPGKQGFNGMKGYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGRPGPDGMPGLMGMKGDDAYIIAGNQGIKGSRGQNGYFGMPGTTGRKGEMGENGLPGLQGYRGDDGIPGLKGYPGLPGQMGTKGEEGDYGFEGLKGRPGPYGEPGLEGIPGKPGIFGQVGLRGEAGNDGFKGRRGMEGDVGERGLS--AGADEGEKGNIGLPGPDGFPGMXGD---------EGFPGVQGVKGNSGTYGRPGLPGYMGMKGTKGDRGAYGDRGIPGSSPNYKVDGEPGENGRNGNYGRPGLKGMKGKPGLFGMDGLQGNKGERGD-GADGERGDDGFPGIPGXAGQDGLPGYQGDRGDFGMPGLKGEMGRMGING-PSLRGMNGESGRPGLYGGPGFEGMKGFMGDPGFPGIPGIPGMKGXPGYFGPPGLEGLLGKPGLPGSSGLMGQPGEIGSQGVPGAPGFIGQPGPQNMPGLPGVDGFKGKNGDNGRDGFPGIQGVPGTKGKSGDVGFPGEGGAIGSPGIPGRRGSDAPLGPP--PKPQGF 1519
BLAST of collagen alpha-1 chain vs. L. salmonis genes
Match: EMLSAG00000010332 (supercontig:LSalAtl2s:LSalAtl2s684:19416:35139:1 gene:EMLSAG00000010332 transcript:EMLSAT00000010332 description:"maker-LSalAtl2s684-augustus-gene-0.7") HSP 1 Score: 248.825 bits (634), Expect = 2.446e-67 Identity = 421/1276 (32.99%), Postives = 525/1276 (41.14%), Query Frame = 0
Query: 13 HLVPTFKMTRKKQDGISRNHRGMSMK------HRLSPTMTGLGLVALVLLASQGVGAKPEALPEAKPNPEAKPQDPNEEYSYQDYGEYGNFGQDYYGEYGEESANGNPPPEYDTNINGVDPCAEVECQP--VECPVETYTPMGECCPVCPQGFSEPEETVRPSFPSPPPYEPPYEPPFEPPYEEPYVPPYEEPYVPPYEDPYTPPYAPPYEEPYEPPYEDPYAPPYEQPDSETPVMVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQV--------GPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGH---------------------------------RGFPG------------------------LDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGF------------NGEKGSPGSTGAPGPQGFPGPRGAPGLNG---------SPGPLGPKGTAGQSGRDGPKGESGM------------------KGELGQMGP---RGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPG------SPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQ------------------GLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNG------------------PPGPP---------GPTGPSGERGTP------GSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQT---------------------------GLPGEQGKEGSRGF---------------------------PGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGS------------SGSQGPVGPDGPRGKQGERGL---QGITGPVGPPGEPGAQGDP------------GSPGPAGEAGATGMMGDRGSP------GPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGL---TGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRN 1026
+ +MT ++G +N M HRL ++ G + AL G + + +P+ E G+ + + GE + S P YD + P + + P ++ + Y + E + +G + PEE + + E E P P VP +P P E+ P P +P EPP ED Y + DS Q G PG G PG G+ G G+ GPPG + + S G KGP + M +Q GP+G G PG+ G G G +G++G+ GD GP G G +G GL G G+ G G+ G GP GP G G RGLPG+PG G +G+ RGFPG + G G G++G KG G PG GPVG GP G +G+RG G G G++G G+ G G+ G G G PG G PGS+G P+G+ G +GPRG++G G GE GK+GPPG G+ G G+PG G G G PG RG G G S G GPKG GQ G GP GE GM G+ G GP RG PG G G G G GP GP G G G PG G PG G SG G++G GP GA GP+GK G G PG GL GL G PG G G G GP+G+ G G TG GP G Q G+PG GP G G+ GP G PG AGP G+PG DG G PPGP G GP GE+G P GS G G +G+ G G+ G GK GE+G+ G+ G+PG G EGS+G GE G G+PG+PG RG G G G PG PG GNPG +G G+ G PG+ G G G GS SGS G GP GP GKQG GL +G GP+GP GE G GD GSPGPAGE G++G MG G P GP+G++G G GI G G + GL G KG+ G G G G GPSGL TG PG+ G +G GP G G+ GPPG G G +
Sbjct: 126 KIARRLRMTYIGENGRIKNRIKFGMNLADGKWHRLGLSIKGNTITALA-----DCGRRQQNQEIKRPDGETLSNS-----GIILLGQQIDDNSFFEGEIQQLSILSXPEAAYDICKSEFMPDCDTDLPPHVLQNDADPYRGIDEGDLLNREGLT-PEEYLEFT-------ERVREIPPPPRAPLTPVPAVPQPEESPAEEEARPTSLPAVPQPEEPPVEDDYDYVLNENDSRGGRGXPGDPGQ-----------PGHPGLSGEPGRDGLDGMQGIQGPPG-------NVLIIPTSMGSTKGPD-NSLQEMISQAMTNLIGPRGPMGLTGLPGLTGMIGTSGIKGEEGQQGDMGPRGIRGMVGSPGLEGKRGRPGRDGERGLSGPVGPKGESGIRGLPGLPGDKGDRGYKGSQGQKGSSGPSGLAGDDGPPGXPGVPGEMGARGFPGPRGFAGLPGPPGKPGLPGLPGSDGMPGNPGNPGNSGSKGSKGPPGHNGPVGFPGPRGVKGDRGERGIHGETGMKGEQGVEGLKGDMGEKGDRGNPGTVGKPGSEG------PQGAKGSEGPRGEAGAIGPFGEKGKIGPPGFAGYPGGPGDKGDKGQQGSDGTPGLKGERGRDGQPGERGQTGSRGFRGKRGRRGSQGFTGPKGDTGQPGPSGPAGEPGMDGPXGPRGXPGEPGLPGISGKDGIKGPPGERGAPGEQGPTGPTGLIGQSGPPGPSGDTGAVGEPGNPGSPGVPGESGRPGETGKEGPIGAPGPQGKTGKPGPPGILGFVGERGLAGLPGMPGLKGETGPKGPSGPQGDKGQQGDTGNEGPAGQQGRIGPPGGPGIPGAKGGMGIPGFPGPTGRDGVIGPRG------LPGPAGPLGEPGEDGAKGEIGGSGEKGFKGGKGSMGPPGPLGPRGPLGAKGSIGPVGEKGPPGMLGRQGSKGEEGPRGVTGPAGQIGLTGKRGESGIKGEMGDHGKVGSPGPSGLPGDPGPPGSKGADGIPGAPGPEGSQGEKGSSGAPGFPGPPGTDGKHGIQGPLGPKGEDGKAGAPGSPGARGIMGPEGPKGNPGAPGFPGNPGEQGKQGIKGEPGRPGEDGKVGDAGSPGEPGLRGDVGPSGSPGKEGPTGPPGKQGNTGLPGEKGDRGPLGPLGETGPAGDQGPPGVEGGPGLRGSPGPAGEVGSSGEMGKPGFPGKPGEIGPRGLKGKRGRRGIKGHRGSI---GLSGEKGDMGEKGEHGSKGPQGPSGLKGETGGPGAXGLKGSEGPPGLPGLEGPPGPKGTRGTS 1349 HSP 2 Score: 229.95 bits (585), Expect = 2.014e-61 Identity = 331/830 (39.88%), Postives = 395/830 (47.59%), Query Frame = 0
Query: 266 GFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSY-MQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGP---PGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPG---------------KRGLPGMPGLPGPKGHRGFPGLDGAKG------------TIGSTGEKGESGSPGSIGPVGP---------------------------MGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGES---------GMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRG------MPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQ---PGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPG------------TDGLNGPPGPPGPTGPSGERGTPGSPGPRGF------QGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGE---RGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQ------------RGMPGPAGSKGSSGSQGP---------VGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGS---PGMMGGRGLPGSKGE 974
G PG PG PG G G GP G GP P ++ G G G GM+G G +G +G GE GD G PG PGS GP+G G G GE+G G G +G GPPG ++G G PGL G +G G PG G G + G TG KG++G PG GP G GP G RG G +GP+GP GL G G G G+ G++G+PG PG PG+PG G PG G G G PG G++GK GPPG GF GE+G G G PG +G GP+G GP G KG G +G +GP G+ G+ G G MG G PGPTG G G RG+ GPA GPLGEPG G +G G G G G G GP G G KG G G G PG+ G +GS G GPRG G+IG G+ G G G++G G G PGP G PGD G G G DG PG PG G +G+ G TDG +G GP GP G G+ G PGSPG RG +G PGAPG G+ G+ G+ G+ G+ G PGE GK G G PGE RG +G G+PG G G PG G G PG KG+ G GP G G G RG PGPAG GSSG G +GP G +GK+G RG++G G +G GE G G+ G G G G +G+ G+ G PG G++G GPPG+PG PG G RG G KGE
Sbjct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core: 56.9954 bits (136), Expect = 3.437e-8 Identity = 76/186 (40.86%), Postives = 94/186 (50.54%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLD---GAKGTIGSTGEKGES 426
PGE+G+RG G LGETG G+ G PG+ G PG+ G PGP +VG G G PG G PG G +G +G+ G G G GS+ GLSG G GE G+ G GPQGP+G G+ G PG GL G +G G PGL+ G KGT G++G KGE+
Sbjct: 1205 PGEKGDRGPLGPLGETGPAGDQG---PPGVEGGPGLRGSPGP-----------------------------AGEVGSSGEMGKPGFPGKPGEIGPRGLKGKRGRRGIKGHRGSI---GLSGEKGDMGEKGEHGSKGPQGPSGLKGETGGPGAXGLKGSEGPPGLPGLEGPPGPKGTRGTSGLKGET 1355
BLAST of collagen alpha-1 chain vs. L. salmonis genes
Match: EMLSAG00000010726 (supercontig:LSalAtl2s:LSalAtl2s70:521491:527469:-1 gene:EMLSAG00000010726 transcript:EMLSAT00000010726 description:"augustus_masked-LSalAtl2s70-processed-gene-6.0") HSP 1 Score: 170.629 bits (431), Expect = 5.070e-44 Identity = 210/498 (42.17%), Postives = 252/498 (50.60%), Query Frame = 0
Query: 410 LDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTP---GSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGA---IGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERG 901
LD A+ + E + G+PG G G +G GPRG RG +G GPPG RG G PG G PG PG GIPG+ G PGL +G+ G G PG +G MG G+ G NG KG G G PG +PG +G PG GP G G+ G GP G G GE G+MGP G PG G G G +GI+G GPPG G PG G +G+ G GP G +G+ G G G GP+G G+TG PG G GS G IGPRG PG+IG RG G + +GL PG+ G PG PG GP+GD G G+ GP G GPTGP G+ G GS GP G G PG PG G G G G G G G++G +G G G+RG + PG G +G+ G PGLDG G G G KG GL G+PG+ G+PG G+KGS DGPRG GE+G
Sbjct: 204 LDNARRETFNCDEYNK-GAPGERGEKGEIGAKGPRGHRGEKGFKGPPGARGDRGF------PGVSGPPGLPGEHGIPGTDG---------RPGL---KGEKGLIGSPGITGSMGSQGRHGLNGMKGDRGDAGLPG---------SPGPHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGE---DGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLI-----------VSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRGVPGPMSDPGPRGPKGDRGRPGLDG-----GKPGEFGKKGDSGLPGVPGEMGIPGAPGNKGS---------DGPRGWPGEKG 645 HSP 2 Score: 159.073 bits (401), Expect = 3.037e-40 Identity = 200/468 (42.74%), Postives = 241/468 (51.50%), Query Frame = 0
Query: 523 GPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGG---PGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMM----GDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGG 983
G PG+ G GE G+ G G G +GF GP GA G G PG GP G G+ G G G G+KGE G +G PG TGS G +GR G+ G G G G PG PG G+P G GP G+ G+ G PG G++G G G +GP G+PG G +G PG G G +GP G QG PG +G G GLTGP G G PG PG GD G GL G G PG GP G G+ G GP PG G+ G +G+ A + GL Q PGERG G PG G +G+AG PG++GP G GP G PG +GP G G G G PGP G +G G G GP G RG++G+RG G +G +G G PG DPG GP G+ G G+ G+ G G G+ G PG GIPG+PG G G G GE+G+PGS G
Sbjct: 220 GAPGERGEKGEIGAKGPRGHRGEKGFKGPPGARGDRGFPGVSGPPGLPGEHGIPGTDGRPGLKGEKGLIGS---PGITGSMGSQGRHGLNGMKGDRGDAGLPGSPGPHGIP------------GHE------GPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGY---NGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGP------PGRIGRRGSSGRRVSAYILYFKGLIVSQNTG-----PGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRGVPGPMSDPGPRGPKGDRGRPGLDGGKPGEFGKKGDSGLPGVPGEMGIPGAPGNKGSDGPRGWPGEKGSPGSCYG 652 HSP 3 Score: 155.221 bits (391), Expect = 4.824e-39 Identity = 202/485 (41.65%), Postives = 243/485 (50.10%), Query Frame = 0
Query: 324 RGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGA------------GGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSA-GRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKD 795
+G+PG +G G G +G +G G+ G GPPG+ G RG G+ G G G+ G G G G G++GL G PG+ G G +G GL+G KG ++G++G PGS GP G G GP G +G G GP G+ G D G GE G +GKPG G G PG KG G G KG GL GP+G GRPG PG +G GP G GE G PG G G +G GPRG P GR G +G SG + + +GL + G RG+ G G GP G GEPG G G GP+GP GQ G GP G+ GP GD+G PG PGL+G +G PG GPRG G+ G RG G G+ GQ G G PGP GP GD+ G PG DG G PG G +GD G PG PG G G G GS GPRG+ G G+PG KD
Sbjct: 219 KGAPGERGEKGEIGAKGPRGHRGEKGFKGPPGARGDRGFPGVSGPPGLPGEHGIPGTDGRPGLKGEKGLIGSPGITGSMGSQGRHGLNGMKG------DRGDAGLPGSPGPHGIPGHEGPLGRKGEPGIPGPIGMEGSD---GEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGP---QGLKGETGMPGEDGPVGSEGSIGPRGPP------------------GRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGI---EGPFGXQGPTGPMGQPGVEGPIGSTGPV---GDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRGVPGPMSDPGPRGPKGDR---GRPGLDG--GKPGEFGKKGDSGL------PGVPGEMGIPGAPGNKGSDGPRGWPGEKGSPGSCYGMQKD 656 HSP 4 Score: 148.673 bits (374), Expect = 5.691e-37 Identity = 186/509 (36.54%), Postives = 234/509 (45.97%), Query Frame = 0
Query: 601 GSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPS------------GERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERG---AIGSPGAPGLRGEAGGPGLDG----PPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEA---------------------GATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNMIIYDCF---VTILGTCNCLYITRVNKDGKVLKDPLESMES 1066
G G +G G +GP G G G GPPG RG G G SGP G G+ G PG G G G+ G GSPG+ G GS GR G G G G G PG+ G P G+ G GP+G G+ G+ GP G +G+ G G GP G PG G G PG G G G++G G GP+G QG PG PG +NG G GL G+TG+PGE G GS G G RG IG G+ G R A G GPG +G PG+ PG++G P G G G +GP G GP G G+ G+ GP+G G G G+PG PG G G +G +G RG PGP G GP G G PG+ GG+ GE G G G PG PG G+ G PG+KG+ GPRG G G PG ++ I F ++ L C+ + + + +D ++ L ++
Sbjct: 223 GERGEKGEIGAKGPRGHRGEKGFKGPPGARGDRGFPGVSGPPGLPGEHGIPGTDGRPGLKGEKGLIGSPGITGSMGSQGRHGLNGMKGDRGDAGLPGSPG------PHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPG---YNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGY---PGVLG---------PKGDAGEPGIEGPFGXQGPTGPMGQ---PGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRGVPGPMSDPGPRGPKGDRGRPGLDGGK-----PGEFGKKGDSGLPGVPGEMGIPGAPGNKGS---DGPRGWPGEKGSPGSCYGMQKDATNIPRGLFPRNLSHLSNCD-IEMASLYQDIILIYKKLSELKK 698 HSP 5 Score: 141.354 bits (355), Expect = 1.242e-34 Identity = 176/431 (40.84%), Postives = 201/431 (46.64%), Query Frame = 0
Query: 662 DTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGE---RGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAI---GSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMP---GPAGSKGSSGSQGPVGPDGPRGKQGER-------------------------GLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIP------------------------GSPGMMGGRGLP---------GSKGEQGNPGSVGG-PGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
D G+PG +G +G G GPRG G+ G +G PGA G G G G GLPG G PG G G G+ G G+PG G G G GLNG G G G G G PG GP G +G PG PG G G DGE G G G PG G +GS G G +G I G+ G PGL G+ G GL GP G G G PG+ G G GL G+ GMP GP GS+GS G +GP G G RG G R G G+ GP G GEPG +G G GP G G G+ G GS GP G G PGPPG+ G G +G RG+P G KG++G PG GG PGE G G +GLPG G G PG G G GP G PG G
Sbjct: 215 DEYNKGAPGERGEKGEIGAKGPRGHRGEKGFKGPPGARGDRGFPGVSGPPGLPGEHGIPGTDGRPGLKGEKGLIGSPGITGSMGSQGRHGLNGMKGDRGDAGLPGSPGPHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRGVPGPMSDPGPRGPKGDRGRPGLDGGKPGEFGKKGDSGLPGVPGEMGIPGAPGNKGSDGPRGWPGEKG 645 HSP 6 Score: 132.494 bits (332), Expect = 8.346e-32 Identity = 188/445 (42.25%), Postives = 221/445 (49.66%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKG-PSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGE------PGSIGKPGPPGFPGIPGSKGDM-------------------GAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIR----GPAGPPGPLGEPGPPGGRGMPGA---DGPSGPKGQSGDRGPPGAA 654
APGE+G +G+ G G G GE GF G PG G G PG GP P L GE G P D ++ + G + GSPG+ G G QG G G GD G G PGS GP G+ G G G G+ G GP G G G++G G G PG GH+G PGL G KGTIG G +G G G G VG GP G +G G G +G G +G+ G TG PGE GSIG GPPG G GS G G G G PG+ GP+GD+G PG G G GP G G G +G GSTG G G PGP G G G PG GP+G G+ G+ GP G+SG G+ G GP PGP G G RGR G+ G G G G PG PG G+PGA G GP+G G++G PG+
Sbjct: 221 APGERGEKGEIGAKGPRGHRGEKGFKGPPGARGDRGFPGVSGP-PGLP-----------GEHGIPGTDGRPGLKGEKGLI---GSPGITGSMGSQGRHGLNGMKGDRGDAGLPGSPGPHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRGVPGPMSDPGPRGPKGDRGRPGLDGGKPGEFGKKGDSGLPGVPGEMGIPGAPGNKGSDGPRGWPGEKGSPGSC 650 HSP 7 Score: 117.087 bits (292), Expect = 6.925e-27 Identity = 160/411 (38.93%), Postives = 186/411 (45.26%), Query Frame = 0
Query: 240 MVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQD---------GEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGID-------GMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQ------GPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPG 628
++ +PG G+ G GR G G G+ G G PG PG G+PG GP+G +G PG+ PGP G +G GE G+ GP G PG G +G GL G G G G+ G G TGP G +G PG PG G G +G KG G GE G GS GSIGP GP G G RG GR + +G+ G G PG PG +G G G PGI G G G GP G PG++ GP GDSG PG PG G+ G PG G G +G G G G G G RG PG PGP GPKG G+ G DG G GE G+ G GLPG G G G G +G GP G GE G PG
Sbjct: 287 LIGSPGITGSMGSQGRHGLNGMKGDRGDAGLPGSPGPHGIPG-----------------------------------HEGPLGRKGEPGI---PGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGL------KGETGMPGEDGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRGVPGPMSDPGPRGPKGDRGRPGLDG-----GKPGEFGKKGDSGLPGVPGEMGIPGAPGNKGSDGPRGWPGEKGSPG 648 HSP 8 Score: 106.301 bits (264), Expect = 1.371e-23 Identity = 111/250 (44.40%), Postives = 133/250 (53.20%), Query Frame = 0
Query: 791 HNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPG---AQGDPGSPGPAGEAGA---TGMMGDRGSPGPQGMQGFPGPPGIP---------GSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGR 1025
N + G PG+ G GE G +G RG GE+G G PGA RG+ G PG+ GPPG PG G PG G PGL G++G+ G G GS GSQG G +G +G +G+ GL G GP G PG G +G+PG PGP G G+ G MG G PG G QG PG GI G PG++G +G+ G G +G G G PG G G GL G G GE GP G G +GP G PG GR
Sbjct: 212 FNCDEYNKGAPGERGEKGEIGAKGPRGHRGEKGFKGPPGA---RGDRGFPGVSGPPGLPGEHGIPGTDGRPGL---KGEKGLIGSPGITGSMGSQGRHGLNGMKGDRGDAGLPGSPGPHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRIGR 455
BLAST of collagen alpha-1 chain vs. L. salmonis genes
Match: EMLSAG00000008697 (supercontig:LSalAtl2s:LSalAtl2s53:1054459:1060191:-1 gene:EMLSAG00000008697 transcript:EMLSAT00000008697 description:"maker-LSalAtl2s53-augustus-gene-10.10") HSP 1 Score: 157.147 bits (396), Expect = 8.238e-39 Identity = 307/772 (39.77%), Postives = 360/772 (46.63%), Query Frame = 0
Query: 246 EQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQ---------QGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGG-------PQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGA----PGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGF------------NGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPG------------LQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNG---PPGPPGPTGPSGERGTPG---------SPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGE--RGAIGSPGAPGLRGEAGG-------PGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGI--TGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGF 950
E G RG GR G TG G+ GFPG PG G PG+ +GSPG++GP GP+G +G+ G G GP G PG G +G GLPG+ G++G+ G G P GP GP G GL G+PGL G PG G +G G G G+ G GS GP G +G GP G GR G G PG GI G A PG PG G+ G PG PGIP +KG+ +G G QG RGD G PG GK GPPGKDG G+ G PG G PGP G G G PGL G PG G +G SGR G KGE+G G+ G G GLPGP G+ G+ G G+ G G GE GPPG +G PG G GP G+ GD G PG GP+GK G TG G G ++G G PGR GP G GK GP+G GK+G GPQGL GLPG G PG G GPPG+ + G PG +G G P GPPG G SGERG G SPG G G PG G+ G NGKDG G E +E R R + + PG GP G P G+PG +G G G PG GMPGP GS G P G RG +G+ G GI +GP+GP +G+PG GP G G G MG+RG+PG +G QG
Sbjct: 797 EVGERGAPGRPGNTGETGKQGFPGLPGEIGRPGV--------------------------------------------QGSPGLRGPSGPEGLKGEIGLPGPLGPPGARGKEGPXGKPGPSGEQGRPGLPGQQGKTGERGPAGDITTVVGPVGPPGPKGSEGLSGLPGLDG------IPGAKGERGEEGELGLSGKDGRDGSRGPKGDIGQPGPTGLPGRSGRDGQPGPPGIPGALAAGDSVPGAPGPRGQDGNPGSPGIPAAKGE------RGERGDQGERGDDGSPGL---RGKPGPPGKDGTVGERGPPGEGGARGDPGIPGKNGPPGPTGASGAVGQPGLEGPPGL---PGDSGPSGRPGEKGEAGRDGKDGDGGQPGLPGPPGNRGKSGEDGM---PGVQGLTGEKGPPGSQGSPGMTGHKGPPGKQGDTGLPGTIGPRGKAGPTGPIGVTGKPGPRGGRGFPGIEGQTGLPGRQGPVGPRGKQGPQG---IQGKSGNSGPQGLPGLPGQSGKPGPPGPPGPPGETITVMPNAISSSNGSPGPEGRQGSMGPSGPPGERGASGERGPSGGMGMPGIPGSPGSPGISGPPGIQGRPGQNGKDGRPGR--------EYSEEDLRDICASVLRDRLSELTSGLRGPPGPPGRGYRGVPGKSGPRG---PIGDPGIQGEHGQRGFPGLPGMPGPYGSSG---------PKGDRGDRGDHGPPGIGESGPMGP------RGNPGPIGPRG-VGEQGPMGERGAPGKRGKQGV 1473 HSP 2 Score: 141.354 bits (355), Expect = 5.428e-34 Identity = 270/684 (39.47%), Postives = 317/684 (46.35%), Query Frame = 0
Query: 388 GKRGLPGMPGLPGPKGHRGFPGLDGAKG---TIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGP---PGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIG---------------PRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPS---------------GERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAI------GSPGAPGLRGEAGGPGLDGPPGGPGPKG------------------NPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGE----------------RGLQGITGPVGPPGEPGAQGD---------PGSPGPAGEAGATGMMGDRGSPGPQGM--------QGFPGP--PGIPGSPGMMGGRGLPGSKGEQG 976
G+RG PG PG G G +GFPGL G G GS G +G SG G G +G GP GP G RG+EGP G PG G G G PG+ G G+ GP G I G +G GPKGS GL G G G PG GE G+ G GKDG +G +G G G PGP G PG G P P + D G G +G+ G G G+P G G RG +G RG G PG G+PGPPG G G GP G G GD G PG GP G G +G G PGL+G G PG GP G+PG+ G G PG GK+G+ G G+QGL G GPPG +G PG G+ G PG G G PGT G G GP GP G + G+ G PG GP G +G G G G +G G GLPG G G+ G G G PGE + S G+PG G G G GPPG G G +PG GPPG+ G PGQ G G G + S + R + E RG+ G +GP GP G+PG QG+ PG PGP G +G G GDRG GP G+ +G PGP P G G MG RG PG +G+QG
Sbjct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core: 140.198 bits (352), Expect = 1.431e-33 Identity = 237/551 (43.01%), Postives = 271/551 (49.18%), Query Frame = 0
Query: 518 ESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAG-------------PPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGS-------------------PGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGN---PGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAG------------------SKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGA---------TGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPG 1006
E G+ G PG+ G GE G G G PG G PG +G+PGL G GP G KG G G GP G G +G G+ GP G G G G++G+ G RGPAG P G G G PG G+PGA G G +G+ G G G G +G GD G+PG GL G G PG GPRGQ G G G P A G+ G+ G QG +G G PG +G GPPG+DG G PG G RGDPG G NGPPGP TG SG G PG GP G+PG G +G G+ GEAG G+ G G+ G G G G+ G G PG GL GE G PG G PG G KG PG +G GL G G RG GP G +G +G G GP GPRGKQG +G+QG +G GP G PG G G PGP G G + GSPGP+G QG GP G PG G G RG G G G PGS G PG GP G+ G PG G G PG
Sbjct: 797 EVGERGAPGRPGNTGETGKQGFPGLPGEIGRPGVQGSPGLRGPSGPEGLKGEIGLPGPLGPPGARGKEGPXGKPGPSGEQGRPGLPGQQGKTGERGPAGDITTVVGPVGPPGPKGSEGLSGLPGLDGIPGAKGERGEEGELGLSGKDGRDGSRGPKGDIGQPGPTGLPGRSGRDGQPGPPGIPGALAAGDSVPGAPGPRGQDGNPGSPGIPAAKGERGERGDQGERG---DDGSPGLRGKPGPPGKDGTVGERGPPGEGGARGDPGIPGKNGPPGP---TGASGAVGQPGLEGP---PGLPGDSGPSGRPGEKGEAGRDGKDGDGGQPGLPGPPGNRGKSGEDGMPGVQGLTGEKGPPGSQGSPGMTGHKGPPGKQGDTGLPGTIGPRGKAGPTGPIGVTGKPGPRGGRGFPGIEGQTGLPGRQGPVGPRGKQGPQGIQGKSGNSGPQGLPGLPGQSGKPGPPGPPGPPGETITVMPNAISSSNGSPGPEGRQGSMGPSGPPGERGASGERGPSGGMGMPGIPGSPGSPGISGPPGIQGRPGQNGKDGRPG 1338 HSP 4 Score: 107.457 bits (267), Expect = 1.238e-23 Identity = 193/511 (37.77%), Postives = 228/511 (44.62%), Query Frame = 0
Query: 590 QMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGD------------RGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGER-------------GTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDG---------------PRGKQGERGLQGITGPVGPP---GEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQG---------------FPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPG-----------------PSGLTGLPGS-KGARGEPGPRGESGMMGPPGRPGLAG 1024
++G RG PG G+ G G++G PG GE G PG +G PG GPSGP+G G+ RG G G G G+ GRPG PG QG + G RG G I G G G G +GL GLPG G PG KG G G+ G G G G RG G G GP G PG +G G+ PG+PGPRG G PG+PG G+ GE G G+ G G G G G PG+ G +G G PG G G PG+ G G PGP G G G PGL G PG G GP+G G G G G DG G+ G G+QG+TG GPP G PG G G PG G+ G G +G RG GP G G G G+PG G +G RG G +G QG G+ G G PG +T +P + + G PGP G G MGP G PG G
Sbjct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core: 58.151 bits (139), Expect = 1.724e-8 Identity = 120/375 (32.00%), Postives = 151/375 (40.27%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPV-GPRGSPGMQGPPGP---QGFQGQQGEAGDHGPPGPPG---------------------SLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGL------------------PGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGE-------------------------------SGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPG 544
PG QG G+ G G G PG G G PG G G+PG GP+ P G G + P + G G PG QGP GP QG QG QG++G+ GP G PG ++ P +S +G G +G G GP+GPPG+RG PG PG+ GP G +G PG +G G G + + G PG GP GP+G G +GE G+ G G PG+ G G +G G+ G G GPPG G+ G GP+G+PG GPRG GE G MG E+G+PG G G
Sbjct: 1133 PGVQGLTGEKGPPGSQGSPGMTGHKGPPGKQGDTGLPGTIGPRGKAGPT---------GPIGVTGKPGPRGGRGFPGIEGQTGLPGRQGPVGPRGKQGPQGIQGKSGNSGPQGLPGLPGQSGKPGPPGPPGPPGETITVMPNAISS---SNGSPGPEGRQGSMGPSGPPGERGASGERGPSGGMGMPGIPGSPGSPGISGPPGIQGRPGQNGKDGRPGREYSEEDLRDICASVLRDRLSELTSGLRGPPGPPGRGYRGVPGKSGPRGPIGDPGIQGEHGQRGFPGLPGMPGPYGSSGPKGDRGDRGDHGPPGI-------GESGPMGPRGNPGPIGPRG-------VGEQGPMG---------ERGAPGKRGKQG 1472
BLAST of collagen alpha-1 chain vs. L. salmonis genes
Match: EMLSAG00000010578 (supercontig:LSalAtl2s:LSalAtl2s702:218313:223892:-1 gene:EMLSAG00000010578 transcript:EMLSAT00000010578 description:"augustus_masked-LSalAtl2s702-processed-gene-1.6") HSP 1 Score: 83.5741 bits (205), Expect = 2.642e-17 Identity = 80/165 (48.48%), Postives = 90/165 (54.55%), Query Frame = 0
Query: 638 PSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPG 802
P G +G+ G+ G PG G KGK G GRPGS G +G RG+ G GPRG G+ G G PG DG+ GL G PG G PG GL G PG DG PGTPG G PG DG NG G G GP G RG G GPR G++G NG DG+ G PG
Sbjct: 110 PPGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGR------DGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIP---GHPGIDGKNGVKGEIGSRGPMGSRGERGITGPR---------GRSGQNGNDGDPGEPG 256 HSP 2 Score: 78.5666 bits (192), Expect = 1.223e-15 Identity = 74/155 (47.74%), Postives = 82/155 (52.90%), Query Frame = 0
Query: 774 PGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGK---EGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPG 925
PG G +G G PG G GK G AG PG G G +G G RG GE GA G PG G G G PGLDG PG G G PG G PG G+PG G+ G G KG GS+GP+ G RG +GITGP G G+ G GDPG PG
Sbjct: 111 PGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPM---------GSRGERGITGPRGRSGQNGNDGDPGEPG 256 HSP 3 Score: 68.5514 bits (166), Expect = 2.062e-12 Identity = 75/191 (39.27%), Postives = 93/191 (48.69%), Query Frame = 0
Query: 649 GPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLT------GPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGL 833
G P GP+GK D+ R L+ ++ PG+ G +GE G G G+ G +G G PG G G +G GP G++G G PG G G PG GL+G PG G G G GTPG+P G+PG PG G NG GE G G G GE+G G RG G+ G G PG PG+
Sbjct: 77 GVPDYQGPEGKMYDSER----NLEAIQDFCAATKEYCPPGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTP------GIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGI 257 HSP 4 Score: 68.5514 bits (166), Expect = 2.363e-12 Identity = 69/180 (38.33%), Postives = 90/180 (50.00%), Query Frame = 0
Query: 850 GPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGS---PGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRN 1026
GP G P ++GP G + +R + ++ P G +G +G+ G G+ G G G G PG++G G G G G G G+ G+ PG G G PG PG+ G PG G GLPG G PG+ G PG PG G G+ G G+RG G RGE G+ GP GR G G +
Sbjct: 74 GPGGVPDYQGPEGKM-YDSERNLEAIQDFCAATKEYCPPGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGV---DGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGND 249 HSP 5 Score: 67.781 bits (164), Expect = 4.333e-12 Identity = 67/159 (42.14%), Postives = 81/159 (50.94%), Query Frame = 0
Query: 458 LRGIDGMTGAPGE---PGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRG---DSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRG 610
L I A E PG GK G G PG+ G KG G G GS G +G RG G G GE+G G PG DG +G G PG G PG G G PG++G+PG G G G G++G KGE G +G +G G RG+ GP G +G+ G G
Sbjct: 95 LEAIQDFCAATKEYCPPGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDG---LPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDG 250 HSP 6 Score: 67.3958 bits (163), Expect = 5.532e-12 Identity = 71/161 (44.10%), Postives = 85/161 (52.80%), Query Frame = 0
Query: 849 PGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRG---KQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPG 1006
PG +G G G PG++G G+RG G GSKGS G +G +GP GPRG + G GL G+ G G PGEPG G PG G G G+ G PG PGIPG PG+ G G+ G G +G GS G G GP G +G G+ G GEPG
Sbjct: 111 PGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRS---------------GLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPG 256 HSP 7 Score: 67.3958 bits (163), Expect = 5.840e-12 Identity = 73/183 (39.89%), Postives = 86/183 (46.99%), Query Frame = 0
Query: 607 GRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKA 789
GR G +G G PG +GE G G G PG+ KG G RG G GP+G G+ G G PGL G G P GEPG DG G+ GL GLPG G PG G+ G PG DG G G G RG G+ G G GP G +G +G G PG PG ++ P +
Sbjct: 112 GREGKKGEVGNPGVIGEKGKRGRAGRPGS------KGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLP---------------GEPGLDGIPGR---SGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGICVYKVKNSTPSEV 270 HSP 8 Score: 67.0106 bits (162), Expect = 7.799e-12 Identity = 82/203 (40.39%), Postives = 101/203 (49.75%), Query Frame = 0
Query: 349 GPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQ--GPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGI------DGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAP 543
GP G P GP G ++ E+ QD + P G GK+G G PG+ G KG RG G G+KG S G +G G PG GP G G AG G GR+G G PGL GI DG+ G G PG+ G PG PG G G KG++G+ GP GS G +G G GR G+ G G G PG + + +P P
Sbjct: 74 GPGGVPDYQGPEGKMYDSERNLEAIQDFCAATKEYCPPGREGKKGEVGNPGVIGEKGKRGRAGRPGSKG---SRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGICVYKVKNSTPSEVIIP 273 HSP 9 Score: 67.0106 bits (162), Expect = 8.087e-12 Identity = 84/223 (37.67%), Postives = 99/223 (44.39%), Query Frame = 0
Query: 250 RGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPG 472
R D + E + E G PG G P GP G + E + +Q K P + +VG G G G +G G G +G +G G GPPGP G G G +GLPG DG G GE PG+ G+PG G G PG+DG GT G G G G G G +G GP G RGERG GP G G G D G PGEPG
Sbjct: 57 RQDTFAIQERYKRDENGGPG-----GVPDYQGPEGKMYDSERNLEAIQDFCAATKEYCPPGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGE---------------PGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGND---GDPGEPG 256 HSP 10 Score: 63.5438 bits (153), Expect = 8.663e-11 Identity = 71/162 (43.83%), Postives = 87/162 (53.70%), Query Frame = 0
Query: 574 GRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNP 735
GR+G KGE G G +G+ G RG G GS G RG RG GP GP GP GE G G+PG DG G G+ G G PG +G G G G PG+PG+ G PG G G G+IG RG G+ G+ G GP+G G G G PG+ G+ ++ P
Sbjct: 112 GREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAA---GLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIP---GHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGICVYKVKNSTP 267 HSP 11 Score: 63.5438 bits (153), Expect = 9.478e-11 Identity = 63/160 (39.38%), Postives = 73/160 (45.62%), Query Frame = 0
Query: 418 GSTGEKGESGSPGSIGPVGPMGPA---GPRGERGREGP------------SGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPG 562
G G+KGE G+PG IG G G A G +G RG G +G GL G+DG G PGEPG G PG G G+PG G PG PG G G GK+G GE GS G G+ G +G GPRG G NG+ G
Sbjct: 112 GREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGV---------------------DGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDG 250 HSP 12 Score: 63.1586 bits (152), Expect = 1.298e-10 Identity = 67/146 (45.89%), Postives = 78/146 (53.42%), Query Frame = 0
Query: 340 GQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGI 485
G++G+ G+ G PG G G RG +G PG G G G GP GP GP G+ G G+PGL G G G PGLDG G G G G G+PG+ G G G G G +G G GP G RG G+TG G G G G PG PGI
Sbjct: 112 GREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGI 257 HSP 13 Score: 61.6178 bits (148), Expect = 4.247e-10 Identity = 81/203 (39.90%), Postives = 92/203 (45.32%), Query Frame = 0
Query: 495 GGPKGSPGLQGPRG---DSGR-----------------PGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQ---SGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGL 674
GGP G P QGP G DS R PGR G+ G++G PG GEKG G G PG +G G RGA G G GP G G AG GRDG GE G+ G G+ G GLPG G+ PG G PG PG G G G G +G G RG G GP+G+ G G G PG G+
Sbjct: 73 GGPGGVPDYQGPEGKMYDSERNLEAIQDFCAATKEYCPPGREGKKGEVGNPG---VIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGT---------------PGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGI 257 HSP 14 Score: 60.4622 bits (145), Expect = 9.950e-10 Identity = 67/149 (44.97%), Postives = 79/149 (53.02%), Query Frame = 0
Query: 549 PGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPG 697
PG G G G+PG +G KG G++GR G KG G +G +G GPRG G G+AG G G G G PG G PG G G+PG DG G G PG G GK+G G GS G G RG G GPRG+ G+ G G+PG
Sbjct: 111 PGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTP------GIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPG 253 HSP 15 Score: 58.9214 bits (141), Expect = 3.327e-9 Identity = 66/147 (44.90%), Postives = 73/147 (49.66%), Query Frame = 0
Query: 718 GPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLV 864
G G KG G PG G G G AG G G+ G G GPPGP GP GE G G PG G G+PG PG G G+ G GLPG G PG G G G G+ G G G+ G G G G+ GP G G GN G G PG+
Sbjct: 112 GREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGIC 258 HSP 16 Score: 54.6842 bits (130), Expect = 7.055e-8 Identity = 62/166 (37.35%), Postives = 72/166 (43.37%), Query Frame = 0
Query: 809 EQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGG------PGPKGNPGHKGPP------------GLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGI 956
E+ E + F PG G +GE G PG+ G G PG KG+ GH+G G GLPG G G G G G G G DG G G G GI G G G+ G +G+ GS GP G G G+ G RG G G G PG PGI
Sbjct: 92 ERNLEAIQDFCAATKEYCPPGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGI 257
BLAST of collagen alpha-1 chain vs. L. salmonis genes
Match: EMLSAG00000012705 (supercontig:LSalAtl2s:LSalAtl2s965:256105:263948:-1 gene:EMLSAG00000012705 transcript:EMLSAT00000012705 description:"maker-LSalAtl2s965-snap-gene-2.9") HSP 1 Score: 70.8626 bits (172), Expect = 7.867e-13 Identity = 74/193 (38.34%), Postives = 86/193 (44.56%), Query Frame = 0
Query: 865 GLPGQRGMPGPAGSKGSSGSQ-----GPVGPDGPRGKQGERGLQGITGPVGPPGEPG------AQGDPGSPGPAGEAGATGMMGDRG--------------------------------SPGPQGMQGFPGPPGIPGSPGMMGGRGLPG--SKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESG 1012
GLPG+ G PGP G G G + + + +GE GL G GP GP GEPG QG PG PG GE G GM G+ G + G G G PG GIPGSPG G RG G KGE+G PG G PG G TG+PG G++G+ G GESG
Sbjct: 100 GLPGKNGFPGPFGIDGPKGEKLLSLGFSIDSNQVLMLKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPGKGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESG 292 HSP 2 Score: 70.0922 bits (170), Expect = 1.760e-12 Identity = 96/243 (39.51%), Postives = 111/243 (45.68%), Query Frame = 0
Query: 384 TGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAG-----------------------GPKGSPGLQGPRGDSGRPGRPGESGKMG---PPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPT 600
+G PGK G PG G+ GPKG + L +I S G PG IG GP +GP G PGL G DG+ G PGEPG G+ G G G G +G G G G PG G G +G PG PG+ GK G PPGK GEKG PG G G PG G PGL GS G G G +G++G G +G+ G KGELG GP GL P
Sbjct: 99 SGLPGKNGFPGPFGIDGPKGEK----LLSLGFSIDSNQVLMLKGEPGLIGKPGP------------KGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPGK----GEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESGKNGERGKRGKKGEKGELGSSGPPGLDAPC 321 HSP 3 Score: 65.4698 bits (158), Expect = 5.077e-11 Identity = 93/234 (39.74%), Postives = 110/234 (47.01%), Query Frame = 0
Query: 514 GRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKG---ESGMKGELGQMGPRGLPGPTGSAG-----------------------RRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPG 721
G PG++G GP G DG GEK Q +G PGL G PGP GP+G G G DG +G E G KGE+G+ G +G G S G G G G G PG G PG PG RG G DGP G G++G PG A KG GD G+ G PGL G +G G G G+ G+ G RG+ G G+ G GP GL P P+GP G
Sbjct: 100 GLPGKNGFPGPFGIDGPKGEKLLSLGFSIDSNQVLM-LKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPG----KGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESGKNGERGKRGKKGEKGELGSSGPPGLDA-PCPLGPDG 327 HSP 4 Score: 63.929 bits (154), Expect = 1.267e-10 Identity = 90/225 (40.00%), Postives = 105/225 (46.67%), Query Frame = 0
Query: 726 TGPPGQDGNPGTPGNAGPRGDP------GTDG-----LNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQT--------------------------GLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPG 913
+G PG++G PG G GP+G+ D L G PG G GP G +G PG PG G QG PG PGK G GK G G G G+ G GK G G PG+ G GSPG G RG DGPPG G KG PG G G PG+ G+PG GSKG G G G +G RGK+G++G +G G GPPG
Sbjct: 99 SGLPGKNGFPGPFGIDGPKGEKLLSLGFSIDSNQVLMLKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGR------DGPPG-KGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESGKNGERGKRGKKGEKGELGSSGPPG 316 HSP 5 Score: 62.7734 bits (151), Expect = 2.972e-10 Identity = 74/198 (37.37%), Postives = 93/198 (46.97%), Query Frame = 0
Query: 847 GGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGS-----SGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMG-----------------------DRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPG--SKGEQGNPGSV---GGPGEPGPSGLTGLPGSKGARGEPGPRGES 1011
G PG G P GP G+ G G++ + + G G +G GP+G QGE GL G G G PGEPG +G+ G G G G +G G+ G G G PG GIPGSPG G RG G KGE+G PG G PG+PG +G+ GLPGSKG +G+ G G++
Sbjct: 100 GLPGKNGFP---GPFGIDGPKGEKLLSLGFSIDSNQVLMLKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPGKGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESGKN 294 HSP 6 Score: 62.7734 bits (151), Expect = 3.186e-10 Identity = 77/200 (38.50%), Postives = 86/200 (43.00%), Query Frame = 0
Query: 712 GLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPG-TDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQT--------------------------GLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAG--GPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSS 882
GLPG G PG G+ GP G+ + G D L G PG G GP G +G PG PG G QG PG PGK G GK G G G G+ G GK G G PG+ G GSPG G RG G G G G PG KGNPG G G+ GLPG +G G G G +
Sbjct: 100 GLPGKNGFPGPFGIDGPKGE-----KLLSLGFSIDSNQVLMLKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPGKGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESGKN 294 HSP 7 Score: 60.4622 bits (145), Expect = 1.719e-9 Identity = 72/197 (36.55%), Postives = 84/197 (42.64%), Query Frame = 0
Query: 325 GSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTG-----------------------EKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGL--RGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGG 496
G PG G PGP G G +GE S+ + L G+ G G+ G GPQG G PG G+ G PG PG KG G G+ G G + S G G G PG +G G G G G+RG+ G GPPG +G G G PG GK G PG PG G KGD G G
Sbjct: 100 GLPGKNGFPGPFGIDGPKGEK----LLSLGFSIDSNQVLMLKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPGKGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESG 292 HSP 8 Score: 56.9954 bits (136), Expect = 2.257e-8 Identity = 98/241 (40.66%), Postives = 116/241 (48.13%), Query Frame = 0
Query: 338 FQGQQGEAGDHGPPGPPGSLGPRGLSGLP-GKDGESGQD-GEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGP--KGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFP------GPRGAPGLNGSPGPLGPKG 568
G G G +G PGP G GP+G L G +S Q G G G PG +G G PGLPG G +G PG G KG IG G KG +G S+G G EGP G PG +G G+ G G+PG +G PG G PG PG +G G GP KG G G G PG PG++G G PG G G+ G G G G +G G G PGL+ +P PLGP G
Sbjct: 95 KTGASGLPGKNGFPGPFGIDGPKGEKLLSLGFSIDSNQVLMLKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVG-------GGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPGKGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESGKNGERGKRGKKGEKGELGSSGPPGLD-APCPLGPDG 327 HSP 9 Score: 56.6102 bits (135), Expect = 2.461e-8 Identity = 69/196 (35.20%), Postives = 84/196 (42.86%), Query Frame = 0
Query: 623 EPGPPGGRGMPGADGPSGPKGQ-------SGD-------RGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGA--------------------------------DGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPG 772
G PG G PG G GPKG+ S D +G PG G G G G PG PG G++G PG G +G+ GK G +G G DGK G++G G G+PG G G +G GPPG+ G G PG A +G+PG G G PG PG G G+ G G
Sbjct: 98 ASGLPGKNGFPGPFGIDGPKGEKLLSLGFSIDSNQVLMLKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPGK-GEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESG 292 HSP 10 Score: 56.225 bits (134), Expect = 3.247e-8 Identity = 78/206 (37.86%), Postives = 99/206 (48.06%), Query Frame = 0
Query: 798 AGLPGQTGLPGEQGKEGSRG--FPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPV----GPDGPRG----------KQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGP--QGMQGFPGPPGIPGSPGMMGGR---GLPGSKGEQGNPGSVG 982
+GLPG+ G PG G +G +G +I S L+GE PGL G PG GP+G PG G G+ G PG+ G G G G G+ G V G D P +G G+ G G G G PG G PGSPG G+ RG GP +G +G+PG + G+PG G GLPGSKG++G+ G G
Sbjct: 99 SGLPGKNGFPGPFGIDGPKGEKLLSLGFSIDSNQVLMLKGE---PGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGK---------RGRDGPPGKGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESG 292 HSP 11 Score: 54.6842 bits (130), Expect = 1.148e-7 Identity = 81/200 (40.50%), Postives = 99/200 (49.50%), Query Frame = 0
Query: 535 GSPGSTGAPGPQGFPGPRGAPGLN-----GSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGG--RGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTG 727
G PG G PGP G GP+G L+ S L KG G G+ GPKG G G G G +G PG G G G+ G++G G +G P G PGA GP G G +G+ G PG G GK+G G PG G +G G PG+ G +G PG+ +G PG GKT G+ GLPG G GD G +G
Sbjct: 100 GLPGKNGFPGPFGIDGPKGEKLLSLGFSIDSNQVLMLKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPGK-GEKGYPGQAAMKGNPGDPGKT------GIPGLPGSKGQKGDNGESG 292
BLAST of collagen alpha-1 chain vs. L. salmonis genes
Match: EMLSAG00000009278 (supercontig:LSalAtl2s:LSalAtl2s593:178144:179871:-1 gene:EMLSAG00000009278 transcript:EMLSAT00000009278 description:"augustus_masked-LSalAtl2s593-processed-gene-1.0") HSP 1 Score: 54.299 bits (129), Expect = 1.808e-7 Identity = 92/231 (39.83%), Postives = 110/231 (47.62%), Query Frame = 0
Query: 394 GMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPS---------GPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMG----AGGPKGSPGLQGPRGDSG-RPGRP------------GESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPG 598
G PG+PG KG G G +G +GEKGE G G G GP G G +G+ G GP GP G +G G G PG G G PGPPG+PG G+KGD G + + G+ GP DS P R G G+ G G+ G GE G G G GP G PGP G G+ G GP G G+ G G DG KGE G +G +G GP+G G
Sbjct: 285 GRPGMPGSKGELG------PVGPMGPSGEKGEHGLLGKTGKTGPRGVQGFQGKDGDSGPQGPPGLPGQSGPIGEKGEYGDMGPPGLMGPPGLPGPPGYPGSKGNKGDRGESRMSKKKRRRHGIYGPMDDSEYMPNREGSPGPPGPPGHDGPPGQKGDRGECGLKGELGDKGEIGLSGPMGLPGPMGEVGMRGPEGPSGLPGSIGLQGFDGKKGERGDRGYMGPSGPKGQKG 509 HSP 2 Score: 53.5286 bits (127), Expect = 2.612e-7 Identity = 111/273 (40.66%), Postives = 131/273 (47.99%), Query Frame = 0
Query: 723 KGLTGPPGQDGNPG------------TPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQR-GMPGPA-------GSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQ 975
K + GPPG+ G+PG G A G PG G G GP GP GPSGE+G G+ G GK G G G G G +G G G G G GE+G G G PGL G G PG PPG PG KGN G +G + +R G+ GP +GS G GP G DGP G++G+RG G+ G +G GE G G G PGP GE G G G G PG G+QGF G G G G MG G G KG++
Sbjct: 251 KVVQGPPGEQGDPGPQGRRGKRGKRGKSGRAARVGRPGMPGSKGELGPVGPMGPSGEKGE---------HGLLGKTGKTGPRGVQGFQGKDGDSGPQGPPGLPGQSGPIGEKGEYGDMGPPGLMGPPGLPG---PPGYPGSKGNKGDRGESRMSKKKRRRHGIYGPMDDSEYMPNREGSPGPPGPPGHDGPPGQKGDRGECGLKGELGDKGEIGLSGPMGLPGPMGEVGMRGPEGPSGLPGSIGLQGFDGKKGERGDRGYMGPSGPKGQKGDE 511
BLAST of collagen alpha-1 chain vs. SwissProt
Match: gi|82202407|sp|Q6P4Z2.1|CO2A1_XENTR (RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1 type II collagen; Flags: Precursor) HSP 1 Score: 362.459 bits (929), Expect = 2.116e-103 Identity = 368/651 (56.53%), Postives = 412/651 (63.29%), Query Frame = 0
Query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
DGE+G+ G+ G +GP GP G RG PG PGLPG KGHRG+PGLDG+KG G+ G KGE G+ G G GPMGP G GERGR G SG G RG DG+ G G PG +G G PGFPG PGSKG+ G G +G G QGPRG+SG PG PG +G G PG DG G KGS G+ G G GFPGPRG PG G+ GPLGPKG G G G KGE G KGE+G GP+G PGP G G+RG RG G AGP GP GE G PG RG PG DG +GPKG G+RG PG GPKG +GD GRPG PGL G RG GR G G GK+GP G G DG+ G GPQG +G PG MG PG KG G PG+ G G G G RG PG DG G GP GP GP+GERG G PGP GFQG+PG PG G GK G+ G+PG+ G PG G G RGFPGERG+ G G G RG G PG DGP G GP G G +GPPGL G+PG+RG G +G KG G G GP+G GK G RGL G GP GP G G +G+ G GPAG GA G GDRG GP G GF GPPG G G+ G +G G KG+ G PG G G PGP G TG+ G KGARG GP G +G G GR
Sbjct: 259 DGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGSKGEAGAAGAKGEGGATGEAGSPGPMGPRGLPGERGRPGASGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKGSSGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEHGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPGKDGETGAQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQGPPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGEKGESGPSGPAGIVGARGAPGDRGETGPPGPAGFAGPPGADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGR 909 HSP 2 Score: 233.802 bits (595), Expect = 4.415e-61 Identity = 338/807 (41.88%), Postives = 394/807 (48.82%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGK------RGLPGMPGLPGPK---GHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGP---------------PGLRGIDGMTGAPGEPGSIGKP---GPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGES---------------------GKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGP------KGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPP------GDKGLTGPPGQDGNPGTPGNAGPRGD---------PGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGE---AGGPGL---------------DGPPGGPGPKGNPGHKGPP---GLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQ---GMQGFPGPPGIPG 958
G QG RG++G G G G G PGT G+PG G G PG AG P P Q GP+GP+G G PG GF+G+ HGP G GS GP+G G G++G+ G GE G GP GPPG+ RG PG GL GPK G RG PGL G KG G G GE G PG+ G G G AGP+G+ G G SG PG+ G G GA GEPG G+ G PG G+PG G+ GA GP G G G RG+ G PG G G+ G PG G GE+G PG G+ GPQG GPRG P G+PG GPKG G SG +G +G G++ G+PG G+AG G +G RG G GP G PG G RG+ G GP GP KG+SG GP G G +G GD G G PG G G P G GQ G G +GE G G G GPQG G PGP GP G +G GPPG G PG G GP G PG+ G GP G G GP+G G P G QG G PG+ G +G+DG +G G G G G+ G G PG+RG G PG PG GE GGPG GP G PG +GN G GPP G G+ G RG GP G+ G+ G+ G GP GP GKQG+RG G GP+GP G GA+G PG GP G+ G G G+RG G + G+QG PGPPG G
Sbjct: 392 GAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKGSSGAPG--------------IAGAPGFPGPRGPPGPQGATGPLGPKG---QTGDPGVAGFKGE------HGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPGKDGETGAQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSSGPQGLQGPRGLP---GTPGTDGPKGATGPSGPNGAQGPPGLQ---------GMPGERGAAGISGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGEKGESGPSGPAGIVGARGAPGDRGETGPPGPAGFAGPP---GADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPSGAPGSAGKEGPKGARGDAGPTGRAGDP------GLQGPAGVPGEKGESGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGSAGDRGPPGPVGPPGLTGPAGEPGREGNAGSDGPPGRDGATGIKGDRGETGPLGAPGAPGAPGAPGPVGPTGKQGDRGESGPQGPLGPSGPAGARGLPGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGTAG 1154 HSP 3 Score: 219.935 bits (559), Expect = 8.232e-57 Identity = 340/904 (37.61%), Postives = 402/904 (44.47%), Query Frame = 0
Query: 319 GPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEG---------------GPQGPTGPPGKRGLPGMPG---------------------------LPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDG------------MTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKG---ESGMKGELGQMGPRGLPGPTGSAGRRGRR------------GIRGPAGPPGPLGEPGPPGGRGM---PGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGL---------------RGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQG---LPG---------PMGPPGDKGLTGPPGQDGNPGTPGNAG---PRGDPGTDGLNGPPGPPGPTGPSG---------------ERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLP------------------------------GQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGE------------RGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGD------------------RGSPGPQGMQGFPGPPGIPGSPGMMGGRG---------------------LPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
G G G G +GPPGPQG +G PG PG G +G G PG DG G+ G GP GP G PG+RG PG G PG G +G G GA+G G+ G +GESG+PGS GP G G G G G +G SG PG+ G G TG G G G PG GF G G KG++G+ GP+G+PG G G G G PG +G +GPPG E+G+PG+ G PG G GP+GAPG G PG GPKG G GR G G G+ G G GP+G GP+G++G GR G+ G GP G GEPG G +G+ PG G G G++G +GP G AGP G+ G+ G PG G QGL +G PG G PG +GPRGE G G+ G GPQGLQG LPG GP G G GPPG G PG G AG P+GD G G GP G PG G G E+G G GP G G GAPG G G G AG G PG G+ G +G GE G G GAPG +G +G PG GP G GPKG G +GPPG G P G RG GP G G G QGP G G +G+ GE +GL G G VG PG+ G +G PG PGP+GE G G G G PG +G G GPPG G+ G+ G RG G +G++G G G G GP+G GLPG +G RG+ G GE+G G G G G
Sbjct: 260 GEAGKPGKSGERGPPGPQGARGF---------PGTPGLPGVKGHRGYPGLDGSKGEAGAAGAKGEGGATGEAGSPGPMGPRGLPGERGRPGASGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKGSSGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEHGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPG------ERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPGKDGETGAQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAG---APGLVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQGPPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGEKGESGPSGPAGIVGARGAPGDRGETGPPGPAGF---AGPPGADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPSGAPGSAGKEGPKGARGDAGPTGRAGDPGLQGPAGVPGEKGESGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGSAGDRGPPGPVGPPGLTGPAGEPGREGNAGSDGPPGRDGATGIKGDRGETGPLGAPGAPGAPGAPGPVGPTGKQGDRGESGPQGPLGPSGPAGARGLPGPQGPRGDKGEAGEAGERGQKGHRGFTG 1142
BLAST of collagen alpha-1 chain vs. SwissProt
Match: gi|146286085|sp|Q91717.2|CO2A1_XENLA (RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1 type II collagen; Flags: Precursor) HSP 1 Score: 355.91 bits (912), Expect = 4.583e-101 Identity = 369/654 (56.42%), Postives = 411/654 (62.84%), Query Frame = 0
Query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
DGE+G+ G+ G +GP GP G RG PG PGLPG KGHRG+PGLDGAKG G+ G KGE G+ G G GPMGP G GERGR G SG G RG DG+ G G PG +G G PGFPG PGSKG+ G G +G G QGPRG+SG PG PG +G G PG DG G KGS G G G GFPGPRG PG G+ GPLGPKG G G G KGE G KGE+G GP+G PGP G G+RG RG G AGP GP GE G PG RG PG DG +GPKG G+RG PG GPKG +GD GRPG PGL G RG GR G G GK+GP G G DG+ G GPQG +G PG MG PG KG G PG+ G G G G RG PG DG G GP GP GP+GERG G PGP GFQG+PG PG G GK G+ G+PG+ G PG G G RGFPGERG+ G G G RG G PG DGP G GP G G +GPPGL G+PG+RG G +G KG G G GP+G GK G RGL G GP GP G G +G+ G GP G GA G GDRG GP G GF GPPG G G+ G +G G KG+ G PG G G PGP G TG+ G KGARG GP G +G G GR G
Sbjct: 256 DGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAAGAKGEGGATGEAGSPGPMGPRGLPGERGRPGSSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKGSSGGPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEQGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGGNGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLVGAPGLRGLPGKDGETGSQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGASGPSGPNGAQGPPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGASGKDGSRGLTGPIGPPGPAGPNGEKGESGPSGPPGIVGARGAPGDRGENGPPGPAGFAGPPGADGQSGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTGVFGPKGARGAQGPAGATGFPGAAGRVGT 909 HSP 2 Score: 220.32 bits (560), Expect = 6.471e-57 Identity = 333/819 (40.66%), Postives = 392/819 (47.86%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEK------------------GESGSPGSIGPVGPMGPAGPRGERGREGPSGP---------------PGLRGIDGMTGAPGEPGSIGKP---GPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGES---------------------GKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGP------KGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGE---------------QGKEGSRGFPGERGAIGSPGAPGLRGE---AGGPGLD---------------GPPGGPGPKGNPGHKGPP---GLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMG 964
G +G G G GE+G PG G G G PGT G+PG G + AG P P Q GP+GP+G G PG GF+G+QG P G GS GP+G G G++G+ G GE G GP GPPG+RG P G+RGFPG DG G G+ GE+ GE G PG+ G G G AGP+G+ G G SG PG+ G G GA GEPG G+ G PG G+PG G+ G+ GP G G G RG+ G PG G G+ G PG G GE+G PG G+ GPQG GPRG P G+PG GPKG +G SG +G +G G++ G+PG G+AG G +G RG G GP G G G RG+ G GP GP KG+SG GPPG G +G GD G G PG G G P G GQ G G +GE G G G GPQG G PGP GP TG G G G G AG G PG G G PGP G GP G G+ G GP+G +G G PG+AG G G AG PG+ G PGE G+ G G PG+RG G PG PG GE GGPG GP G PG +GNPG GPP G G+ G RG GP G+ G+ G+ G G GP GKQG+RG G GP+GP G GA+G G GP G+ G G G+RG G +G G G PG PGS G G
Sbjct: 383 GARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKGS--------SGGPGIAGAPGFPGPRGPPGPQGATGPLGPKG---QTGDPGVAGFKGEQG------PKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPNGPPGERGAP---------GNRGFPGQDGLAGPKGAPGERGVPGLGGPKGGNGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLVGAPGLRGLPGKDGETGSQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSSGPQGLQGPRGLP---GTPGTDGPKGASGPSGPNGAQGPPGLQ---------GMPGERGAAGISGPKGDRGDTGEKGPEGASGKDGSRGLTGPIGPPGPAGPNGEKGESGPSGPPGIVGARGAPGDRGENGPPGPAGFAGPP---GADGQSGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGP------TGVFGPKGARGAQGPAGATGFPGAAGRVGTPGPNGNPGPPGPPGSAGKEGPKGVRGDAGPPGRAGDPGLQGAAGAPGEKGEPGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGSSGDRGPPGPVGPPGLTGPSGEPGREGNPGSDGPPGRDGATGIKGDRGETGPLGAPGAPGAPGAPGSVGPTGKQGDRGESGPQGPLGPSGPAGARGLAGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGSAGDQG 1154 HSP 3 Score: 211.846 bits (538), Expect = 3.144e-54 Identity = 330/862 (38.28%), Postives = 394/862 (45.71%), Query Frame = 0
Query: 337 GFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEG------------------------GPQGPTGPPGKRGLPGMPGLPGPKGHRG------------------FPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDG---------------------MTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPR------------------------GAPGLNGSPGPLGPKGT---AGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAG------------------PKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGA------DGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDG---LNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAG---------------ATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGL------------------PGSKGEQGNPGSVGGPGEPGPSGLTGL------------------------PGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
G G+ G++G+ GPPGP G+ G G GLPG G G G GP GP G PG+RG PG G G +G+ G FPG G+KG G TG +G G+ G G G G GP G G G G PG +G G TG G G G PG GF G G KG++G+ GP+G+PG G G G G PG +G GPPG+ G G +G PG G GP+G PG R GA GL G PG GP+G +G SG DG G G +G GQ G G PGP G+ G G+ G +G G PG G PG G G G +GP+GP G+ G++GPPG +G +G G+ G PG G +G RG PG G G G GPRG PG G +G GP G QG PG G PG++G G G G+ G G GP G G DG L GP GPPGP GP+GE+G G GP G G GAPG G NG G AG G PG G+ G +G GE G G GAPG +G +G PG GP G GPKG G +GP G G PG G G+ G +G+ GP GP G GK+G +G++G GP G G+PG QG G+PG GE G +G G G PG +G +GFPG PG G PG GG G G G +GNPGS G PG G +G+ G G +G RGE GP+G G GP G GLAG
Sbjct: 257 GEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAAGAKGEGGATGEAGSPGPMGPRGLPGERGRPGSSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKGSSGGPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEQGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGGNGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLVGAPGLRGLPGKDGETGSQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGASGPSGPNGAQGPPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGASGKDGSRGLTGPIGPPGPAGPNGEKGESGPSGPPGIVGARGAPGDRGENGPPGPAGF---AGPPGADGQSGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTGVFGPKGARGAQGPAGATGFPGAAGR---VGTPGPNGNPGPPGPPGSAGKEGPKGVRGDAGPPGRAGDPGLQGAAGAPGEKGEPGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGSSGDRGPPGPVGPPGLTGPSGEPGREGNPGSDGPPGRDGATGIKGDRGETGPLGAPGAPGAPGAPGSVGPTGKQGDRGESGPQGPLGPSGPAGARGLAG 1112 HSP 4 Score: 171.4 bits (433), Expect = 8.745e-42 Identity = 302/797 (37.89%), Postives = 352/797 (44.17%), Query Frame = 0
Query: 257 GETGRPGEMGFPGTPGMPGTPGMPGPPG-PQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSL------------GPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRG---------------LPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGM------------TGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELG---------------QMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQG------LPGPMGPPGDKGLTGPPGQDGNPGTPGNAGP---RGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDG---------------------EAGLPGQTGLPGEQG---KEGSRGFPGERG------------------AIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGL------------------------------------QGITGPVGP 911
G+TG PG GF G G G G GP G P P E G++G +P G GP G PG +G PG +GF GQ G AG G PG G G G GLPG G +G+ G+ GPQG GP G G PG+ G PGPKG G PG G KG +G+ G +G G G G GP GPAGP GERG +GP GP G +G+ G G PGE G+ G GP G G PG +G G GLQGPRG G PG G G GP G +G + G PG QG PG RGA G++G PKG G +G GP+G SG G G + G G GP G G RG G RG GPPGP G GPPG G G G G GQ GD G PG GP G +PG QG G G G RG G G G PGA G+ G GP G G G GP G +G GPPG+ G+PG G AG +G+PG DG +GP GPPGP G SG+RG G PG RG +G PG PG +G GK G +G PG+ G PG G ++G+ G G+RG ++G G G RGE+G G GP G G +G G +GP G G G+ G G G +G +G QG GP G G QG G G TGP GP
Sbjct: 455 GQTGDPGVAGFKGEQGPKGEIGSAGPQGAPGPAGEE----------GKRGARGEP--------GAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGGNGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLVGAPGLRGLPGKDGETGSQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGS------SGPQGLQGPRGLPGTPGTDGPKGASGPSGPNG---------AQGPPGLQGMPGERGAAGISG------PKGDRGDTGEKGPEGASGKDGSRGLTGPIGPPGPAGPNGEKGESGPSGPPGIVGARGAPGDRGENGPPGPAGFAGPPGADGQSGLKGDQGESGQKGDAGAPGPQGPSG---------APGPQGPTGVFGPKGARGAQGPAGATGFPGAAGRVGTPGPNGNPGPPGPPGSAGKEGPKGVRGDAGPPGRAGDPGLQGAAGAPGEKGEPGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGSSGDRGPPGPVGPPGLTGPSGEPGREGNPGSDGPPGRDGATGIKGDRGETGPLGAPGAPGAPGAPGSVGPTGKQGDRGESGPQGPLGPSGPAGARGLAGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGSAGDQGATGPAGPAGPRGPPGPVGPSGKDGSNGISGPIGPPGPRGRSGETGPSGP 1203
BLAST of collagen alpha-1 chain vs. SwissProt
Match: gi|19855071|sp|P02466.3|CO1A2_RAT (RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type I collagen; Flags: Precursor) HSP 1 Score: 347.821 bits (891), Expect = 7.699e-99 Identity = 373/803 (46.45%), Postives = 423/803 (52.68%), Query Frame = 0
Query: 318 VGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGP------------------------------------KGNPGHKGPPGLVGLPGQRGMPGPAGS---KGSSGSQGPVGPDGPRGKQGERGL------QGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMG------------------DRGSPGPQGMQGFP------------------------------------GPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPG 1021
+G +GPRG PG G PGPQGFQG GE G+ G GP GS GP G G G+DG G+ G G +G GP G RG PG PGLPG KG RG GLDG KG G+ G KGE G+PG G G G G GERGR G GP G RG DG G G G IG GPPGFPG PG KG++G G G G GPRG++G PG G G G PG +G G KG+ G G G G PGPRG PG G+ G GP+G G+ G G KGE+G KGE G G +G PGP+G G+RG G G AGP GP G G PG RG+PGADG +G G G+RG G AG +G +GD GRPG PGL G RG PG G G GK GP G PG DG+ G +GP G +G G +G PG KG +G PG+ G G PG AG RG PG DG NG GPPGP G G +G G GP GFQG+PG G AG GK GE GLPG+ GLPG G G RG PGE GA G G G+RG +G PG DG G G +G G+ G G G PG G PGPAG+ +G +G+ GP GP GPRG GERG G GP G G+PGA+G+ G+ GP GE G G G RG GP GM GFP GP G G G G G G KG G PG+ G PG GP GL G PG G G G RG+ G+ G G PG
Sbjct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core: 279.256 bits (713), Expect = 9.696e-76 Identity = 402/1134 (35.45%), Postives = 496/1134 (43.74%), Query Frame = 0
Query: 241 VDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMP---------GTPGMPGPPGPQ-PNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKG---SPGLQGPRGDSGRPGRPGE------SGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGP------------------------------------------------LGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGD---------------KGLTGPPGQDGNPGTPGNA------------------------GPRGD------PGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLP---GQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGR----------PGLAGRNVNMIIYDCFVTILGTCNCLYITRVNKDGKVLK----DPLESMESRAPQGAEDLLEEWDQVDP-QACQEQKGPRVQWG---LMVVQDRKVILDQLG-HLETEVLQDCLDQLDLLVVWVPGVLKVSVANRDLLERRVSMDPKDYLGPLAPLVSAEKEENKDQLANLVHQVLVDALETRDHLEQLDQWDPQEDLAYPD----NLAKLEILDNLESVEIVASLAPRV 1236
V APG G RG G +G G G +G G PG P G G PGP GP P E + L G P + + + G G G+PG+ PGP+G G G AG GP G G GP G G G GE G G GP GP+G GKRG PG PG GP G G G G++G G+ G G G PG+ G GP G GP G+ GR G PGL G G+ G+PG G GK GP G PGI G G +G GP+G + G GP+G SG PG+PGE +G G PG DG NG +G PG G G +G GP G PG G PGP G G G+ G G GE G+ G G G RG PG +G+AG G GIRGP+G PGP +G PG G RG PGA G GP G SGDRG GAAGP G G G PG RG G GP G G G G+PGA G+ G GP+G G+ GP GP G +G GPPG G PG G GPRGD G G +GPPG G GPSGE GT G PG G QG+ GAPG G G GE G PG G GE PG G G PGA G G G PG++G PG G GNPG GPPG G P G+RG PG G G++G+ GP G GP GK G RG G G VGP G+ GP G +G G+ GD+G PG +G +G PG+ G G+ G GL G G+QG PG VG G GP+G +G G G G PGP G +G+ G G V+ YD G Y + L+ + +++S Q L E + +P + C++ + +W + ++ +D + + + + C+ Q + + AN+ + + +AE +K+ L L+ + Q + + +AY D L K IL VE+VA R
Sbjct: 231 VGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGL---PGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRPGE---PGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGE------RGEVGPAGPNGFAGPAGSAGQPGAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGQPGIAGALGE---------PGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGP---------VGAVGPRGPSGPQGIRGDKGEPGDKGARGL---PGLKGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPIGKDGRSGHPGPVGPAGVRGSQGSQGPAGPPGPPGPPGPPGVSGGGYD-----FGFEGGFYRADQPRSQPSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWKSDYYWIDPNQGCTMDAIKVYCDFSTGETCI-QAQPVNTPAKNAYSRAQANKHVWLGETINGGSQF------EYNAEGVSSKEMATQLAFMRLLA-----NRASQNITYHCKNSIAYLDEETGRLNKAVILQGSNDVELVAEGNSRF 1314 HSP 3 Score: 218.009 bits (554), Expect = 3.044e-56 Identity = 295/698 (42.26%), Postives = 347/698 (49.71%), Query Frame = 0
Query: 436 GPMGPAGPRGERGREGPSGPPGL----------------------------------RGID------GMTGAPGEPGSIGKPGPPGF------PGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGA------------PGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRG---PPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPP------GQDGNPGTPGNAGP------------RGDPGTD---GLNGPPGPPGPTGPSGER------GTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLP------GEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQG------------------FPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPG 1021
GP G GPRG+RG GP G G+ +G+ G+ G G PG++G PGP GF PG PG G G+ GP G PG G G G+PGRPGE G +GP G GF G G PG G PG QG G GAPG NG+PG G +G G+ GR G G +G +G G +GP G GP GSAG G G GP G GP+G PGP GP+GP+G++G G P G G G +G TG G+ GL G+ G+PG GPRG PG +G G G G G+ GP G +G G G PG G GPP G+ G+PG PG+AGP RG PG D G+ GPPG G TGP+G R G PG PG G +G+PG+PG G GK+G GLPG G P G +G+ G+ GFPG +G G PG P GE G PGL G G PGP GN G +GPPG G+ G +G GPAG G G GP G G GK GERGL G G GP G G +G PG G AG +G G+ G G+PGP G +G PG G G PG G +G G +GE GNPG G G PG G G G+ G RGE G G SG GP G PG
Sbjct: 33 GPTGDRGPRGQRGPAGPRGRDGVDGPVGPPGPPGAPGPPGPPGPPGLTGNFAAQYSDKGVSAGPGPMGLMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGP---------AGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKP---GEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPG 718 HSP 4 Score: 206.838 bits (525), Expect = 9.235e-53 Identity = 245/542 (45.20%), Postives = 276/542 (50.92%), Query Frame = 0
Query: 525 PGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAG---QSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPG------------------KIGPRGEPGADGKTGQVGPQGLQGLPG------------PMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGP------PGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQ---RGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
PG G G +G PG+ GAPGPQGF GP G PG G GP G +G AG ++G DG G+ G GE G +GP+G G G+ G G +GIRG G G G+PG G +G PGA G +G GQ+G RG PG + GR G+PG G RGS G +GP G G ++GP G PG G GP+G GLPG G G KG TG PG G PG PG PRG PG G G GP PGP G GE G G PG G QG PG G+ G G GE G G G PG +G GSRG PG G G G PG RG G G+ GP G G G PG GP GL G PG G GP G G G GP+GP GPRG+ G G G GP G PG+PG +G PG G G G G G +G PGPQG+QG G G G PG G G G+ GE G PG G PGE GLPG G RGE GP GESG GP G G+ G
Sbjct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core: 124.02 bits (310), Expect = 3.631e-27 Identity = 179/414 (43.24%), Postives = 204/414 (49.28%), Query Frame = 0
Query: 675 RGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGP---PGDKGLTG-------PPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKE---GSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGK------------------------------QGERGL---------------QGITGPVGPPGEPGAQGDP------GSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
+G G GPRGQ G GPRG + G GP G G PG GP PG GLTG G PG G GPRG PG G PGP G GP+GE G PG GP G +G G PGKAG +G G+ G PG+ G+ G QG G+ G PG +G G G GL+G+ G G+ G PG PG G PG G GL G G+ G PGPAG++GS GS GPVGP GP G +GE GL G+TG G G PG G P G PGP G AGATG G G PGP G +G G G PGS G +G PG GE+G GS G PG GP+G GL GS G+RG PG G +G+MGPPG G G
Sbjct: 32 KGPTGDRGPRGQRGPAGPRG------RDGVDGPVGPPGPPGAPGPPGPPGPPGLTGNFAAQYSDKGVSAGPGPMGLMGPRGPPGAVGA---PGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGS---AGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTG 433
BLAST of collagen alpha-1 chain vs. SwissProt
Match: gi|123797137|sp|Q3U962.1|CO5A2_MOUSE (RecName: Full=Collagen alpha-2(V) chain; Flags: Precursor) HSP 1 Score: 343.199 bits (879), Expect = 9.027e-97 Identity = 347/651 (53.30%), Postives = 397/651 (60.98%), Query Frame = 0
Query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
DGE G++G G G +G PG RG PG PGLPG KGHRG GL+G KG IG+ G KGE+G G +G +GP+GP G GERGR GP G PG RG GM G PG G +G PG GFPG PG KG+ G G +G G QG RG++G PG G G G G DG G KG GS G GP G GP G+PG GS GP G +G +G G G KGE+G KGE G G +G GP G G+RG RG G GPPGP+GE G PG RG PG+DG GPKG G+RGP G++GPKG GD GRPG PGL G RG G G +G GK+GP G PG DG+ G G G++G PG MG PG KG +G G+ G G G G RG PG DG GP GP GP G +GERG G PGP GFQG+PG PG G GK G+ G+PG+ G G G G RG PGERG G G PG +G AGG G DGP G PGP G G GPPGL G+PG+RG+ G G KG G G G +G G G RGL G GP GP G G +G+PG G G G+ G G RG GP G GF GP G G PG+ G G PG KG+ G+PG G G PGP G G+PG KG RG GP G +G G GR
Sbjct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core: 256.529 bits (654), Expect = 2.356e-68 Identity = 377/894 (42.17%), Postives = 436/894 (48.77%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQ-SAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPG------LPGPKGHRGFPGLDGAKGTIGST---------------------------------GEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGD---MGAGGPKG---------SPGLQGPRGDSGRPGRPGESGKMGP---PGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESG---------MKGELGQMGPRGLPGPTGSAGR---------------RGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAG---PKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAI------------------GSPGAPGLRGEAGGPGLDG------PPGGPGPKGNPGH---------------KGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGM---QGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMM 1014
GE G G+ G +G +G PG GFPG PG+PG G G G LE ++ A GE GP+ P M GP+GPRG PG +G GPQG G++G G G PGP G LG G SG PG G G+ G G +GP GP G+RG G PG LPG G G PG G G+ G++ G KGE+G G GP G GP GP GE G+ GP G PG G G G G PG+ G PG G PG G++G+ +G+ GPKG PGL G RG +G PG G GK+GP PG+DG G GS G G PG G PGP+G+ G G PG G G GQ G G GE G + GE G+ GP PGPTG G +G G G GP GP GE G PG RG PG G G KG +G GP G G P G GDTG PG G+ G RG G GP+G G IG +G G G G G G G PGP GP G+KG GP G G PG+ GN G RG+ G G G GP GP G G +G PG PG +G G PG G AG G G G+PG G G QG G+ GFPG G + G G PGLRG+ G G G PPG PG KG+PG G G+VG+PGQRG G G G +G+ G VGP G G +G G G G GP GEPG +G G+ G G GA G GDRG PGP G+ QG PG PG G+PG G RG PGS+G G PG G G PGP G G G G RG+ G +G G
Sbjct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core: 226.483 bits (576), Expect = 8.061e-59 Identity = 352/901 (39.07%), Postives = 401/901 (44.51%), Query Frame = 0
Query: 274 PGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGF---------------PGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGP---QGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGG---RGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPG------------LQGLRGSPGRIGPRGQPGKIGP------------RGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDG------------------EAGLPGQTGL---PGEQGKEGSRGFPGERGAIGSP------GAPGLRGEAGGPGLDGPPGGPGPK---GNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPV---------------------GPDGPRGKQGERG------------------------------------LQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDR------------------GSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
P P + EP N G P F G G RG G++GP G G G +GEAG GP G G LGPRG+ GE G GP G PGKRG GMPG PGP G G P GS+G G G G GP G GP GP+G+RG GP GP G +G+ G G G PG+ G G G G G +G G G G PG +G G G PG G G +GPPG++G G +G PG+ G PGP +G PG RG PG +G PGP G +G G G GPKG G G G+ G G G TG+ G +G G GP G PG G PGPPG RG PG+ G GPKG SGD G PG AG G G G PG G L G RG G GP G G GP +G PG G G +GP+G +G PG G P G+TG PG+ G G G GP+G+PG G G GPPG G GERG G+PGP+G +G G G G G DG E G PG GL PG +G GSRG G GA+G G PG++GE G PG G G PGP+ G+PG GP G+ GL G RG GP G+ G GS G V GP G RG G G G G VG PG+ G +G PG PGPAG G G G G PGP+G G G PG G+ G G RG PG G PGS G PG PGP G PG G RGEPG RG +GPPGR G G
Sbjct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core: 204.912 bits (520), Expect = 4.699e-52 Identity = 253/588 (43.03%), Postives = 291/588 (49.49%), Query Frame = 0
Query: 508 GDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRG---APGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPG---ADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGR------------------IGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGS------------KGSSGSQGP---------------------------------VGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRN 1026
G+ GR G GE G G PG GF G G PG G G +G GP+G APG G GP GP G G P G GM GE G++GP+G PG G+ G G+ G GP G PG G PG PG +G G A GP GP+GQ G+ GPPG AG +G G G G+PG +G GS G GP+G G+ G G PG G+ G G G G+ GP+GPPG++G GP G G G PG G RG PG G G G PGP G GERG GS GP+G QG PG PG+ G G GL G G+ G +GK G G PGE G G PG+ G+RG+ G GL GP G G G PG G G+PGQRG PG G G G QGP VGP GPRG++G G +G G G PGE G G G GP G G TG +GD G PG +QG PG GI G+PG G RG G KG +G G+ G G PGP G G G G +GEPGPRG G G G PG G N
Sbjct: 265 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMG------PLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGL---PGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAG---NAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPG---LQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGEN 837 HSP 5 Score: 132.109 bits (331), Expect = 1.100e-29 Identity = 200/497 (40.24%), Postives = 225/497 (45.27%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESG---------------QDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGL---RGIDGMTGAPGEPGSIG---------------------KPGPPGFPGIPGSKGDMG---------AGGPKGSPG---------------LQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRG 676
PGE G G G GE G PGE G PG G+PG GM G GP GP +P GP G+ G GPPG QG G++G AG GP G G +G +G G G DG G + GE GP+G GPPG RG PG G GP G GF G +G G G KGE G PG G G GP G G G GP G PGL RG G GA G PGS G K GPPG G PGS G +G + G KG PG G RG G PG+ GE G G PG G G+ G G+TG GP G GP G+ G G PGP GP G G GRDG GE +G+ G GP GLPG G+ G PGP+G PG G RG PG+ GP GP G++G RG PG GP+G GD G G G +G RG
Sbjct: 695 VPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPD------------------GPKGNP-----------GPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAG---PQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGSPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGE---RGDRGDPGPAGLPGSQGAPGT------------PGPVGAPGDAGQRGEPGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1144 HSP 6 Score: 124.79 bits (312), Expect = 1.975e-27 Identity = 149/339 (43.95%), Postives = 167/339 (49.26%), Query Frame = 0
Query: 732 DGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGP---------------VGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPP------------------------GIPGSPGMMGGRGLPGSKGEQGNPGSV------GGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGR 1025
DG PG GN G G G+ G G PG PG G G RG G GP+G G PGA G+AG G G G G G+PGE+G+ G +G PG+RGA G PG PG G G PG G PG PG KG G G G G GQRG GP G GS G G VG DG G +G G G +GP GP G G GDPG PG GEAG +G PGP G+QG GPP G PG+ G G GLPG KG QG G V GG G+PG G GLPG++G G PG +G G +GP G PG GR
Sbjct: 264 DGEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGP------KGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGR 596
BLAST of collagen alpha-1 chain vs. SwissProt
Match: gi|51338769|sp|P30754.2|CAFF_RIFPA (RecName: Full=Fibril-forming collagen alpha chain) HSP 1 Score: 332.413 bits (851), Expect = 2.583e-95 Identity = 389/710 (54.79%), Postives = 446/710 (62.82%), Query Frame = 0
Query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
Y+QAQVGP+GPRG PG G PG QG+QG +GE GD GP GP G GP G +G+ GK G+ G+DGE GP+G GP G RG GMPG+PGPKGHRGF GL G+KG G +G +G G PG GP GP+GP G GERGR+G SG PGLRG+DG+ G PG PG IG G PGFPG PGSKGD G G KG+ GLQGP G SG+PG GE+G G PG DG NGE G+ G +G PGP GFPGPRG PG GSPG G KG G +G G G G+KG G G G PG G AG+RG G GPAG PGP G+ G PG RG+PG G SG G G++GP G G KG GDTGR G+ G G+ G PG G G+PGK G G G DGK G+ GPQG QGL G G G G G PG++G PG PG G +GD G DG G GPPG GP+G RG PG G +GFQG+ GA G G GK GE G G TG G G G RG PG+RG +G G PG RG G G G PG G KG G GP GLVGLPG+RG G GSKGS G GP G G RGK GERG +G G GP G ++G+ G G GE G+ G G+RG G QG+QG PGPPG G G G G PG +G +G G G G G +G GL G+ G+RGE G +GE G+ G PG+PGL
Sbjct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core: 236.113 bits (601), Expect = 1.438e-62 Identity = 352/849 (41.46%), Postives = 411/849 (48.41%), Query Frame = 0
Query: 237 TPVMVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQ-PNLEPFINQLQQSAGGEKG-PSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPG---SLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTG------------APGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGR------------GMPGADGPSG---PKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGP---MGPPGDKGLTGPPGQDGNPGTPGNA---GPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGP------------------AGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGL------------------TGLPGSKGARGEPGPRGES 1011
+P PG +G+RG +G G G G +G G PG+ G G PG PG N EP A GE G P P F GPRG PG G PG G +G G G+ G PG PG S GP G G PG GE+G+ G G GP G PG +G G+PG RG PG+ GA G +G GEKG SG PG+ GP G + GR+G G PG+ G+ PG PGS G+PG G PGI G G G GP+G GL G +G +G PG GE GK G PG+ G +GE+G G G G +G PGPRG G G G G G AG++G G G +G G G G RG PG G+ G RG G RG GP GP G PG G + G+PG GP G KG GD GP G AG +GK G+ G G GL G G G RG G G RG PG G+ G G QG+QG PGP GP G KG G PG+ G G G GPRG G GL G G G TG GE G PGSP G PG PG +G G G AG G+ G+ G +G G G G+RG+ G PG G +GE G DGPPG GP G PG +G G+ G+ G RG GP G +G++G QGP GP G G G+ G G G G G PG +G+PG G AG G G+MG RG P G GPPG RG G G QG G VG PG GP+G+ TGLPG +G +G PG GES
Sbjct: 173 SPGFPGTPGSKGDRGQSGIKGAQGLQGPVGLSGQPGVAGENGHPGMPGMDGANGEP-------GASGESGLPGPSGFP---------GPRGMPGTAGSPGQAGAKGDGGPTGEQGRPGAPGVKGSSGPPGDVGAPGHAGEAGKRGSPGSPGPAGSPGPQGDRGLPG------SRGLPGMTGASGAMGIPGEKGPSGEPGAKGPTG---------DTGRQGNQGTPGIAGL------PGNPGSDGRPGKDGRPGIRGKDGKQGEQGPQGPQGLAGLQGRAGPPGARGEPGKNGAPGEPGAHGEQGDAGKDGETGAAGPPGAAGPTGARGPPGPRGQQGFQGLAGAQGTPGEAGKTGERGAVGATGPSGPAGPGGERGAPGDRGNVGPRGMPGERGATGPAGPTGSPGVAGAKGQGGPPGPAGLVGLPGERGPKGVGGSKGSRGDIGPRGKAGERGKDGERGERGENGLPGPSGLAASKGERGDMGSPGERGSPGPAGERGPAGSQGIQGQPGPPGDAGPAGTKGDIGFPGERGTRGATGKQGARGPRGLAGKRGLRGAGGSRGETGAQGEIGLPGSP------GQPGLPGPSGQPGPSGPAGTAGKQGVKGARGSPGLVGKQGDRGSDGEPGRDGTKGER---GEDGPPGVSGPTGAPGQQGERGMPGMVGLRGETGPMGGQGMKGDGGPPGPSGDRGERGNAGPQGPTGPSGQAGAPGQEGAPGKDGLPGLAGRPGERGEPGVAGRAGSQGLAGLMGQRGLP------GAAGPPGD---------RGERGEPGGQGVQGPVGAPGSQGPAGIMGMKGEAGGKGAKGDKGWTGLPGLQGLQGTPGHSGES 960 HSP 3 Score: 229.95 bits (585), Expect = 1.409e-60 Identity = 320/748 (42.78%), Postives = 375/748 (50.13%), Query Frame = 0
Query: 325 GSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGR---PGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGP------------------RGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGG------------RGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSP---------GLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAG---------------ATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSK---GEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESG 1012
GS G +G G +G QG QG G G PG G G G+ G+ G +GE G GE G GP+G PG RG+PG G PG G +G G G +G G+ G KG SG PG +G G G AG RG G GP+G PG +G G+ G+ G PG G G GIPG KG P G PG +GP GD+GR G PG +G G PG DG G+ G PG G G QG GP+G GL G G GP G G+ G++G GE G GE G G RG PGP G G +G G +G G G GE G G RG PG G GP+G G+RG G AGP G G G G GL G RG G G +G G IGPRG+ G GK G+ G +G GLPGP G KG G G G G+PG AG RG G+ G+ G PGPPG GP+G +G G PG RG +G G G G GL G+ GL +G GSRG G +G IG PG+PG PGL GP G PGP G G G G+ G RG PG G +G GS G G DG +G++GE G G++GP G PG+ G +G PG G GE G +G G+RG+ GPQG G G G PG G G GLPG GE+G PG G G G +GL G G GA G PG RGE G
Sbjct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core: 140.584 bits (353), Expect = 2.075e-32 Identity = 246/615 (40.00%), Postives = 287/615 (46.67%), Query Frame = 0
Query: 514 GRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSG------RDGPKGESGMKGELGQMGP------------------RGLPGPTGSAGRRGRRGIRG---------PAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIG---PRGEPGADGKTGQVG------PQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGA---------PGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGP------------------VGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMM---------------GDRGSPGPQGM---QGFPGPPGIPGSPGMMGGR------------GLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNM 1029
G PG+SG MGP GK G G G G +G G G PGPRG G P+GP+G G G G +G SG KGE G+ G RG G G G+ G G+RG P GP G G PG PG G G G SG KG G +GP G +G G G+ G PG PG+ G G PG G G PG G PRG PG G GQ G P G QG PG PG KG +GPPG G PG G AG RG PG+ PGP G GP G+RG PGS RG GM GA G G G+ G +G PG G G+ G++G++G PG G G+PG+ PG+RG+ G G GP G G G G GPPG G PG+ G PG G+ G G G GP GPRG+QG +GL GAQG PG G GE GA G GDRG+ GP+GM +G GP G GSPG+ G + GLPG +G +G GS G G+ GP G G G G RGE RGE+G+ GP G G +M
Sbjct: 37 GEPGDSGPMGPIGKRGPPGPAGIAGKSGDDGRDGEPGPRGGIG------PMGPRGAGGMPGMPGPKGHRGFRGLSGSKGEQGKSGNQGPDGGPGPAGPSGPIGPRGQTGERGRDGKSGLPGLRGVDGLAGPPGPPGPIGSTGSPGFPGTPGSKGDRGQSGIKGAQGLQGPVGLSGQPGVAGENGHPGMPGMDGANGEPGASGESGLPGPSGFPGPRGMPGTAGSPGQAGAKGDGGPTGEQGRPGA---PGVKGSSGPPGDVGAPGHAGEAGKRGSPGS------PGPAGSPGPQGDRGLPGS---RGLPGMTGASGAMGIPGEKGPSGEPGAKGPTGDTGRQGNQGTPGIAGLPGNPGSDGRPGKDGRPGIRGKDGKQGEQGPQGPQGLAGLQGRAGPPGARGEPGKNGAPGEPGAHGEQGDAGKDGETGAAGPPGAAGPTGARGPPGPRGQQGFQGLA------------GAQGTPGEAGKTGERGAVGATGPSGPAGPGGERGAPGDRGNVGPRGMPGERGATGPAGPTGSPGVAGAKGQGGPPGPAGLVGLPGERGPKGVGGSKGSRGDIGPRGKAGERGKDGERGE---RGENGLPGPSGLAASKGERGDM 618 HSP 5 Score: 136.346 bits (342), Expect = 4.279e-31 Identity = 207/517 (40.04%), Postives = 237/517 (45.84%), Query Frame = 0
Query: 606 RGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGP---------------------------------------------------KGKHGDTGRPGSPGLQGLRG---------------SPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNA---------GPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMP---GAPGKAGHNGKDGEAGLPGQTGLPGEQGKE---GSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGD---------------RGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGA---RGEPGPRGESGMMGPPGRPGLA 1023
+G RG G +GP GP+G+ GPPG G+ G G G G+ G RG G GP +G+ G+ GR G GL GLRG S G G G PG G RG+ G G G GP GL G PG G G G+ G G +G PG G + GPRG PGT G G G G GP+GE+G PG+PG +G G P GAPG AG GK G G PG G PG QG GSRG PG GA G+ G PG +G +G PG GP G G +GN G G GL G PG G PG G G G G G GP+G QG GLQG GP G GEPG G PG PG GE G G G+ RG PGP+G QGF G G G+PG G GE+G G+ G G GP G G PG +G RG PG RG +G GP G PG+A
Sbjct: 33 QGLRGEPGDSGPMGPIGKRGPPGPAGIAGKSGDDGRDGEPGPRGGIGPMGPRGAGGMPGMPGPKGHRGFRGLSGSKGEQGKSGNQGPDGGPGPAGPSGPIGPRGQTGERGRDGKSGLPGLRGVDGLAGPPGPPGPIGSTGSPGFPGTPGSKGDRGQSGIKGAQGLQGPVGLSGQPGVAGENGHPGMPGMDGANGEPGASGESGLPGPSGFPGPRGMPGTAGSPGQAGAKGDGGPTGEQGRPGAPGVKGSSGPPGDVGAPGHAGEAGKRGSPGSPGPAGSPGPQGDRGLPGSRGLPGMTGASGAMGIPGEKGPSGEPGAKGPTGDTGRQGNQGTPGIAGLPGNPGSDGRPGKDGRPGIRGKDGKQGEQGPQGPQGLAGLQGRAGPPGARGEPGKNGAPGEPGAHGEQGDAGKDGETGAAGPPGAAGPTGARGPPGPRGQQGFQGLAGAQGTPGEA------GKTGERGAVGATGPSGPAGPGGERGAPGDRGNVGPRGMPGERGATGPAGPTGSPGVA 543 HSP 6 Score: 125.946 bits (315), Expect = 7.526e-28 Identity = 236/580 (40.69%), Postives = 273/580 (47.07%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGET------------------GRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSY-------MQAQVGPVGPRGSPGMQGPPGPQ---------GFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTG------------PPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPG---RPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFP---GPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDK------------------GLTGPPGQDGNPGTPGNAGPRGDPGTDGLN 753
PG G +GDAG+ GET G G+ GF G G GTPG G G + + GGE+G D + + GP GP GSPG+ G G G G++G G G G G +GPRG +G GKDGE G+ GE G GP+G PG+RG PG G GP G +G G G G G G KG+ G PG G G G G RG RG G G LRG G G G G IG PG PG PG+PG G G GP G+ G QG +G G PG + G+ G G PG+DG GE+G G G GP G P G RG PG+ G G GP G G G GP G SG +GE G GP+G GP+G AG G+ G G G PG G PG G G+ G G G G G RG PGAAGP G G+ G PG G+QG G+PG GP G G G G GA G G G GLQGL G G G+ G GPPG+DG PG G GPRG G DG +
Sbjct: 432 PGAHGEQGDAGKDGETGAAGPPGAAGPTGARGPPGPRGQQGFQGLAGAQGTPGEAGKTGERGAVGATGPSGPAGPGGERGAPGDRGNVGPRGMPGERGATGPAGPTGSPGVAGAKGQGGPPGPAGLVGLPGERGPKGVGGSKGSRGDIGPRGKAGERGKDGERGERGENGLPGPSGLAASKGERGDMGSPGERGSPGPAGERGPAGSQGIQGQPGPPGDAGPAGTKGDIGFPGERGTRGATGKQGARGPRGLAGKRG---LRGAGGSRGETGAQGEIGLPGSPGQPGLPGPSGQPGPSGPAGTAGKQGVKGARGSPGLVGKQGDRGSDGEPGRDGTKGERGEDGPPGVSGPTGAPGQQGERGMPGMVGLRGETGPMGGQGMKGDGGPPGPSGDRGERGNAGPQGPTGPSGQAGAPGQEGAPGKDGLPGLAGRPGERGEPGVAGRAGSQGLAGLMGQRGLPGAAGPPGDRGERGEPGGQGVQGPVGAPGSQGPAGIMGMKGEAGGKGAKGDKGWTGLPGLQGLQGTPGHSGESGPPGAPGPRGARGEAGGRGSQGPPGKDGQPGPSGRVGPRGPSGDDGRS 1008 HSP 7 Score: 113.62 bits (283), Expect = 4.020e-24 Identity = 171/427 (40.05%), Postives = 194/427 (45.43%), Query Frame = 0
Query: 672 QGLRGSPGR------IGPRGQPGKIGPRGEPGADGKTGQVGP------------------------QGLQGLPGPMGPPGD---------------------KGLTGPPGQDGNPGTPGNAG------------PRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGH------NGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNM 1029
QGLRG PG IG RG PG G G+ G DG+ G+ GP +G +GL G G G +G TG G+DG G PG G P G G+ G G PG G G SG +G G GP G G PG G+ GH +G +GE G G++GLPG G G RG P G GSPG G +G+ G G G PG PG KG+ GPPG VG PG G G GS GS G G GP G RG G RGL G+TG GA G PG GP+GE GA G GD G G QG G G PG PGS G G G PG +G+ G GE GP G GL G +G G PG RGE G G PG PG G +
Sbjct: 33 QGLRGEPGDSGPMGPIGKRGPPGPAGIAGKSGDDGRDGEPGPRGGIGPMGPRGAGGMPGMPGPKGHRGFRGLSGSKGEQGKSGNQGPDGGPGPAGPSGPIGPRGQTGERGRDGKSGLPGLRGVDGLAGPPGPPGPIGSTGSPGFPGTPGSKGDRGQSGIKGAQGLQGPVGLSGQPGVAGENGHPGMPGMDGANGEPGASGESGLPGPSGFPGPRGMP---GTAGSPGQAGAKGDGGPTGEQGRPGAPGVKGS---SGPPGDVGAPGHAGEAGKRGSPGSPGPAGSPGPQGDRGLPGSRGLPGMTGAS------GAMGIPGEKGPSGEPGAKGPTGDTGRQGNQGTPGIAGLPGNPGSDGRPGKDGRPGIRGKDGK------QGEQGPQGPQGLAGLQGRAGPPGARGEPGKNGAPGEPGAHGEQGDA 441
BLAST of collagen alpha-1 chain vs. SwissProt
Match: gi|143811378|sp|P05997.3|CO5A2_HUMAN (RecName: Full=Collagen alpha-2(V) chain; Flags: Precursor) HSP 1 Score: 337.035 bits (863), Expect = 1.153e-94 Identity = 348/651 (53.46%), Postives = 396/651 (60.83%), Query Frame = 0
Query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
DGE G++G G G G PG RG PG PGLPG KGHRG GL+G KG +G+ G KGE+G G +G +GP+GP G GERGR GP G PG RG GM G PG G +G PG GFPG PG KG+ G G +G G QG RG++G PG G G G G DG G KG GS G GP G GP G+PG GS GP G +G G G G KGE+G KGE G G +G GP G G+RG RG G GPPGP+GE G PG RG PG+DG GPKG G+RGP G++GPKG GD GRPG PGL G RG G G +G GK+GP G PG DG+ G G G++G PG MG PG KG +G PG+ G G G G RG PG DG GP GP GP G +GERG G PGP GFQG+PG PG G GK G+ G+PG G G G G RG PGERG G G PG +G AGG G DGP G PGP G PG GPPGL G+PG+RG+ G G KG G G G +G G G RGL G GP GP G G +G+PG G G G+ G G RG GP G GF GP G G PG+ G G PG KG+ G+PG G G PGP G G+PG KG RG GP G +G G GR
Sbjct: 266 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGR 916 HSP 2 Score: 251.906 bits (642), Expect = 8.186e-67 Identity = 376/894 (42.06%), Postives = 430/894 (48.10%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLE-PFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRG---------------LPGMPGLPGPKGHRGFP------------------------GLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGD---MGAGGPKGS---------PGLQGPRGDSGRPGRPGESGKMGP---PGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGE---------SGMKGELGQMGPRGLPGPTGSAGR---------------RGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDR---GPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAI------------------GSPGAPGLRGEAGGPGL---------------------DGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGM---QGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMM 1014
GE G G+ G +G G PG GFPG PG+PG G G G LE P + GE GP+ P M GP+GPRG PG +G GPQG GQ+G G G PGP G LG G SG PG G G+ G G +GP GP G+RG G G PG KG G P G+ G G G G KGE+G G GP G GP GP GE G+ GP G PG G G G G PG+ G PG G PG G++G+ +G+ GPKGS PGL G RG +G PG G GK+GP PG+DG G GS G G PG G PGP+G+ G G PG G G GQ G G GE G+ GE G+ GP PGPTG G +G G G GP GP GE G PG RG PG G G KG +G GP G+ GP G GDTG PG G+ G RG G GP+G G IG +G G G G G G G PGP GP G+KG GP G G PG+ GN G RG+ G G G GP GP G G +G PG PG +G G PG G AG G G G+PG G G QG G+ GFPG G + G G PGLRG+ G G DG PG GP G G G G+VG+PGQRG G G G +G+ G VGP G G +G G G G GP GEPG +G G+ G G GA G GDRG PGP G+ QG PG PG G+PG G RG PGS+G G PG G G PGP G G G G RG+ G +G G
Sbjct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core: 192.971 bits (489), Expect = 2.254e-48 Identity = 251/588 (42.69%), Postives = 288/588 (48.98%), Query Frame = 0
Query: 508 GDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRG---APGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPG---ADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGR------------------IGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGS------------KGSSGSQGPVGPDGPRG---------------KQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGAR------------------GEPGPRGESGMMGPPGRPGLAGRN 1026
G+ GR G PGE G G PG GF G G PG G G +G GP+G APG G GP GP G G P G GM GE G++GP+G PG G+ G G+ G GP G PG G PG PG +G G A GP GP+GQ G+ GPPG G G G G G+PG +G GSPG GP+G G+ G G PG G+ G G G G+ GP+GPPG++G GP G G G PG G RG PG G G G PGP G GERG GS GP+G QG PG PG+ G G GL G G+ G +GK G G PGE G G PG+ G+RG+ G GL GP G G+PG G G G+PGQRG PG G G G QGP GP G +G QG G G GP+GP GE G G+ G PG G G GM G G P G +G PGP G PG G G +G+PG +G G PG G G G G G G+ GAR GEPGPRG G G G PG G N
Sbjct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core: 127.872 bits (320), Expect = 2.531e-28 Identity = 197/497 (39.64%), Postives = 224/497 (45.07%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESG---------------QDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGM------TGAPGEPGSI------------------GKPGPPGFPGIPGSKGDM------------------------GAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRG 676
PG+ G G G GE G PGE G PG G+PG GM G GP GP P GP G+PG GPPG QG G++G AG GP G G +G +G G G DG G + GE GP+G GPPG RG PG G GP G GF G +G G G KGE G PG G G GP G G G GP+G PGL+G G TG PG G + GK GPPG G PGS G + G GP G G G RG G PG+ GE G G PG G G+ G G+TG GP G GP G+ G G PGP GP G G GRDG GE +G+ G GP GLPG G+ G PGP+G PG G RG PG+ GP GP G++G RG PG GP+G GD G G G +G RG
Sbjct: 697 VPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPD------------------GPKGSP-----------GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAG---PQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGE---RGDRGDPGPAGLPGSQGAPGT------------PGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146 HSP 5 Score: 115.931 bits (289), Expect = 1.111e-24 Identity = 142/333 (42.64%), Postives = 168/333 (50.45%), Query Frame = 0
Query: 732 DGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPG---HKGPPG------------L---------VGLPGQRGMPGPAGSKGS------------SGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGS---PGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGR 1025
DG PG GN G G G+ G G PG PG G G RG G GP+G G PG+ G+AG G G G G G+PGE+G+ G +G PG+RGA G PG PG G G PG G PG PG KG G +GP G +G G G GP GS G+ G QG GP G RG+ G+ G+ G G GP GEPG G G GP GE G G GD G+ PGP G +G PG G PGS G+ G +G G +G G+ G G G+PG G GLPG++G G PG +G G +GP G PG GR
Sbjct: 266 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGR 598 HSP 6 Score: 90.1225 bits (222), Expect = 7.996e-17 Identity = 167/440 (37.95%), Postives = 205/440 (46.59%), Query Frame = 0
Query: 238 PVMVDAPGEQGNRGD------AGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQ-LQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPM---GPAGPRGERGREGPSGPPGLRGIDGMTG------------------------------APGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDS------------------GRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGR------DGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRG 613
P + PGE+G G G G +G PG+ G PG GMPG G+ G PGP+ + + + +AG + GP G +G PG +G GP G +G G G++GP G G GP+G G PG GE G+ G+ G G GP G + G PGP G G PGL G +GT G G G GS G +GP GP GPAGP GE G+E GPPGLRG G G PG G+ G+ G G PG G +G G GP G+PG GP G + G PG G +G G PG+DG GE+ G G PGP G PG +GAP G+PGP+G G AGQ G GP G +G +G G GPRG G G G RG++G RG
Sbjct: 722 PGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQG------LAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKE---GPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGER---GDRGDPGPAGLPGSQGAP---GTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146
BLAST of collagen alpha-1 chain vs. SwissProt
Match: gi|166218146|sp|A0MSJ1.1|CRA1B_DANRE (RecName: Full=Collagen alpha-1(XXVII) chain B; Flags: Precursor) HSP 1 Score: 333.183 bits (853), Expect = 4.261e-93 Identity = 378/1018 (37.13%), Postives = 481/1018 (47.25%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPG---PPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGP------KGQSGDRGPPGAAGPKGK---HGDTGRPGSPGLQGLRG---SPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERG-TPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDR---GSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGG------PGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRN-------VNMIIYDCFVTILGTCNCLYITRVNKDGKVLKDPLESMESRAPQGAEDLLEEWDQVDPQACQEQKGPRVQWGLMVVQDRKVILDQLGHLE-----TEVLQDCLDQLDLLVVWVPGVLKVSVANRDLLERRVSMDPKDYLGPLAPLVSAEKEENKDQLA--NLVHQVLVDALETRD-HLEQLDQWDPQEDLAYPDNLAKLEILD 1221
PGE G +GD G LG G PGE GF G G+ G+PG+PG PGPQ G +G RG G+ GP GP+GF GD GPPG G GP+G +G+ G G G G G QGP GP G GL G PG G G+ G G+ G G G+ G GE G G +GP G MG AG +G+RG G GPPG +G G PG PG G GP G PG GS+G G GPKG+ G +GP G G G G G GPPGK G +G+ G G TG GP GF G +G P GP G G G GP+G G+ G LG++G GLPG G G G G +G G PG +GE G G RG PG DG +GP KG+ GD G G +G KG G GR G PGL G++G PG+IG RG+PG+ G +G G G+ G +G QG G GP G G G G PG+ G G PG G G G G G PGP G G G+ G G PGP G G G G G+ G+ G PG G+ GE+GKEG+ G PG G G PG G +G GP G P+G G++G PG VG+PG RG+ G G +G G G G DG +G G+ G G VG PG+PG QG+ G+PG G G+ G G+R G GP G +G G G PG G G +G PG GEQG PG +G PG+ GP G+ G G +G G G G G++GP G PG G V L + + + L L +SR+ +E + + Q + K + + +++ I + LG E L +C +L+ W+ L S N ++ S + L P V+A K E L N +H + +A++ H + W ++ ++ + D
Sbjct: 645 PGEPGLKGDKGELGLPGEPGEPGFQGDKGIQGSPGLPGVQGKPGPQ--------------------------------GKIGDRGPDGLPGPLGPEGF------PGDIGPPGQNGVEGPKGNAGVRGIPGPGGLPGLEGDQGPVGPAGAPGLEGRPGRKGISGNPGEEGMKGEPGMTGNPGMLGERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKG---AMGHPGAPGERGLSGPAGAPGPHGSRGLSGTRGPKGTRGARGPDGPVGEKGMMGMKGPEGPPGKQGLSGQMGKIGETGEAGPTGFTGVQG---------PTGPPGAKGILGEPGPQGSPGVLGPLGEIGAIGLPGKAGDQGLPGEPGEKGAVGSPGNIGEQGLIGPRGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKPGKIGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEGPPGP---SGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGN------KGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGEPGLDGAAGKDGAKGMPGDLGRD---GDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGITGHSGPPGKRGLNGGMGFPGKQGDQGFKGQPGDAGEQGFPGVLGIFGPQGPPGDFGPVGIQGPKGPQGLMGMQGAIGPVGIIGPSGNPGPQGDKGNKGEMGVQGPRGPPGPRGPPGPPGLPAVAFSHENEALGAALHVFDSRSALRSEMYQDTDLPLLDQGSEIFK--TLHYLSILIHS---IKNPLGTQENPARMCRDLLECEHRLNDGTYWIDPNLGCSSDNIEVTCSFTS-GGQTCLKP----VTASKLEIGVSLIQMNFIHLLSSEAVQIITVHCLNVSVWASEDSKTPSSSMVYFKAWD 1590 HSP 2 Score: 317.005 bits (811), Expect = 9.907e-88 Identity = 357/842 (42.40%), Postives = 423/842 (50.24%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNL-EPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGM------------------QGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGP---------QGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRG------------ERGREGPSGPPGLRGI---DGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLV-GLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQG---ITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGM---------QGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNM 1029
PG G+ GD G G G PG G+PG G+PG G GP G + + P I L A GE+G P G G G PG G PGP G G G+ G G GPPG +GP+G+ G PG+ G G GE G QG G G GLPG+ G PGP+G G G DG G +G G G+ G PG G GP G AG RG ++G GP+G PGL G G++G PGE G G+PG G PG+ G +G +G GP G GL G +GD G G+PG PPG+ G G G+PG G GP G PGP G+ GL+G+ GPKGT G G DGP GE GM G G GP G G +G G+ G G GP G G G GPPG +G+ G GP G G G G GA G GK GD G PG PG +G GSPG IG + G IGPRG+PG DG+ G GP G +G GD GL G G+ G G G G GDPG G+ GP G PG G ERG PG G +G QG G G G G TG G +G G+ GF G G +G G PGL G G G G G PGPKG G +G G V G PG G GP G++G G G G G G QGERG +G + G GP G PG +G G+ GP G+ G G+RGSPGP G+ +GF G PG+ G+ G G +G+PG G G+ VG PG+PGP G G PG G +G GP+GE G+ G G PG G N M
Sbjct: 513 PGPSGHPGDQGIRGPDGSPGAKGYPGRQGLPGPIGNMGPKGVRGFIGIPGIFGLP-GADGERGLPGVP--------GKKGKMGRPGFPGDFGERGPPGPDGNPGEIGAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGELGLPGEPGEPGFQGDKGIQGSPGLPGVQGKPGPQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQNGVEGPKGNAGVRGIPGPGGLPGLEGDQGPVGPAGAPGLEGRPGRKGISGNPGEEGMKGEPGMTGNPGMLGERGPVGFVGPFGEMGLAGEKGDRGETGQPG------PPGEKGAMGHPGAPGERGLSGPAGAPGPHGSRGLSGT---RGPKGTRGARGPDGPVGEKGMMGMKGPEGPPGKQGLSGQMGKIGETGEAGPTGFTGVQGPTGPPGAKGILGEPGPQGSPGVLGPLGEIGAIGLPGKAGDQGLPGEPGEKGAVGSPGNIG---EQGLIGPRGDPGVDGEAGPSGPDGAKG------EQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKPGKIG---ERGKPGEKGSKGHQGQLGEMGALGEQG---------DTGFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGEPGLDGAAGKDGAKGMPGDLGRDGD---VGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGITGHSGPPGKRGLNGGM 1312 HSP 3 Score: 305.064 bits (780), Expect = 7.215e-84 Identity = 357/838 (42.60%), Postives = 422/838 (50.36%), Query Frame = 0
Query: 274 PGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKR---GLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGS---------PGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEP---GSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPR---------------------GAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGE---LGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGP------LGEPGPPGGRGM---PGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGM------PGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGL---------QGITGPVGPPGEPGAQGDPGS----PGPAGEAGATGMMGDRGSPGP------QGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNP---------GSVGGPGEPGPSGL---TGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRN 1026
PG G GP GP P + G G SP P G +G PG+ G PG G G++G+ G GP G PG G RG G PG G G+ G GP G GP G R G+PG+ GLPG G RG PG+ G KG +G G G+ G PG IG GP+G G G+ G G GPPGL G G+ G PGEP G G+ G PG PG PG +GD G G G PG+QG G G+ G G G GP G +GF G+ G PG G GP+G G R GAPGL G P G KG +G G +G KGE GM G LG+ GP G GP G G G +G RG G PGP +G PG PG RG+ GA GP G +G SG RGP G G +G G G G G++G G PG+ G GQ GKI G+TG+ GP G G+ GP GPPG KG+ G PG G+PG GP G+ G GL G G G G GE+G GSPG G QG+ PG G+AG +G DG G G GL GE G++G GF G G G PG G++G G PG G G PG KG+ GH+G G +G G++G G G KGS G+ G +G G G+QGE GL QG G GP GE G QGD G PGP+G+ G G GDRG PG +G+QG G G PG PG G RG PG KG +GN G G G PGP G+ G+ G +G GEPG G +G G G PG GR+
Sbjct: 447 PGKRGPRGPSGPHGKPGPPGTPGPKGKKGNPGISPG--------RAPSGIKGDPGLVGLPGQPGQPGRKGQKGHPGPSGHPGDQGIRGPDGSPGAKGYPGRQGLPGPIGNMGPKGVRGFIGIPGIFGLPGADGERGLPGVPGKKGKMGRPGFPGDFGERGPPGPDGNPGEIGAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGELGLPGEPGEPGFQGDKGIQGSPGLPGVQGKPGPQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQNGVEGPKGNAGVRGIPGPGGLPGLEGDQGPVGPAGAPGLEGRP---GRKGISGNPGEEGMKGEPGMTGNPGMLGERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKGAMGHPGAPGERGLSGPAGAPGPHGSRGLSGTRGPKGTRGARGPDGPVGEKGMMGMKGPEGPPGKQGLSGQMGKI---------GETGEAGPTGFTGVQGPTGPPGAKGILGEPGPQGSPGV---LGPLGEIGAIGLPGKAGDQGLPGEPGEKGAVGSPGNIGEQGLIGPRGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKPGKIGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGEPGLDGAAGKDGAKGMPGDLGRD 1261 HSP 4 Score: 174.096 bits (440), Expect = 1.712e-42 Identity = 208/508 (40.94%), Postives = 241/508 (47.44%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQ----PNLEPFINQLQQSAGGEKGPS-PDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGP------TGPPGKRGLPGMPGLPGPKGHRGFPGLDGA------KGTIGS---TGEKGESGSPGSI----GPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGD---------MGAGGPKGSPG---LQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPR---GAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQ 711
+PG G G+ G +G G+ G+ G PG PG G G PG G Q P +P ++ GE GPS PD Q VG G G G+ G G +G G G G GP G PG +G RG G G G GQ GE G G GP G RG G G PG G +G PGL G +G++GS GEKGE G G + GP G +GP G RG+RG G G PGL G+ G G G PG G GP GFPG GSKG+ G G +GSPG + GPRG GR G GE G G GKDG G G G G G G PGP+ GAPGL G G GPKG G +G GP G+ RGL G G G++G +G + G+PG G +G PG G GP+G GD GP G GPKG QGL G G IGP G IGP G PG G G G G+Q
Sbjct: 935 SPGVLGPLGEIGAIGLPGKAGDQGLPGEPGEKGAVGSPGNIGEQGLIGPRGDPGVD-------GEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKPGKIGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGEPGLDGAAGKDGAKGMPGDLGRDGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGITGHSGPPGK------------RGLNGGMGFPGKQGDQGFK---------GQPGDAGEQGFPGVLGIFGPQGPPGDFGPVGIQGPKGP------------QGLMGMQGAIGPV---GIIGPSGNPGPQGDKGNKGEMGVQ 1399
BLAST of collagen alpha-1 chain vs. SwissProt
Match: gi|83301579|sp|P05539.2|CO2A1_RAT (RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1 type II collagen; Contains: RecName: Full=Collagen alpha-1(II) chain; Contains: RecName: Full=Chondrocalcin; Flags: Precursor) HSP 1 Score: 322.783 bits (826), Expect = 3.952e-90 Identity = 373/653 (57.12%), Postives = 419/653 (64.17%), Query Frame = 0
Query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
DGE+G+ G+ G +G GP G RG PG PGLPG KGHRG+PGLDGAKG G+ G KGESGSPG G GPMGP G GERGR GP+G G RG DG G G PG +G G PGF G PG+KG+ G G +G G QG RG+ G PG PG +G G PG DG G KGS G+ G G GFPGPRG PG G+ GPLGPKG G+ G G KGE G KGE G GP+G PGP G G+RG RG G AGP GP GE G PG RG PG DG +GPKG G+RGP G AGPKG +GD GRPG PGL G RG GR G G GK+GP G PG DG+ G GPQG +G PG MG PG KG G PG+ G G G G RG PG DG G GPPGP+GP+GERG G+PGP GFQG+PG PG G GK G+ G+PG+ G PG G G RGFPGERG+ G+ G G RG G PG DGP G GP G PG +GPPGL G+PG+RG G AG KG G G GP+G GK G RGL G GP GP G G +G+ G PGP+G GA G G+RG GP G GF GPPG G PG G +G G KG+ G PG G G PGP G TG+ G KGARG GP G +G G GR G
Sbjct: 186 DGEAGKPGKAGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFLGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVG 838 HSP 2 Score: 186.808 bits (473), Expect = 1.616e-46 Identity = 325/802 (40.52%), Postives = 382/802 (47.63%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGK------RGLPGMPGLPGPK---GHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREG---------------PSGPPGLRGIDGMTGAPGEPGSIGK---PGPPGFPGIPGSKGDMGAG------------GPKGSPG---------------LQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFP------GPRGA------------------PGLNGSPGPLGPKGTAGQSGRDGPKGESGM------------------KGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGP---RGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGM 947
G QG+RG+ G G G G G PGT G+PG G G PG AG P P Q GP+GP+G G PG GF+G+QG G+ GP GP G+ GP G++G+ G GE G GP GPPG+ RG PG GL GPK G RG GL G KG G G GE G PG+ G G G AGP+G+ G G G PG+ G G GA GEPG G+ G PG G+PG G+ GA G +G+PG G +GD G PG G G +GP G+ GF GE+GSPG+ G GP+G P GP+GA PG G+ G GPKG G G GP+G G GE G++GP PGP+GS G RG G RG GPPGP G GPPG G PGA G G GQ GD G PG GP G G G G G +G RG+ G G G PG G G PG++G G GP G G GP G GD TG PG+ G+PG G AG +G+PG DG +G GPPGP G +G+RG G PG RG +G PG PG +G PG+ G PG G G G G G G G PG G PG DGPP G G G+ G RG G G+ G+ G G GP GP GKQG+RG G GP+GP G GA+G G GP G+ G G G+RG G +G
Sbjct: 319 GAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPG--------------IAGAPGFPGPRGPPGPQGATGPLGPKG---QTGEPGIAGFKGEQGPKGETGPAGPQGAPGP------AGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGP---PGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPAGPPGPAGKDGPKGARGD---TGAPGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGE---------PGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGS---PGADGPP------------GRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIAGPQGPRGDKGEAGEPGERGLKGHRGF 1067
BLAST of collagen alpha-1 chain vs. SwissProt
Match: gi|17865659|sp|Q01149.2|CO1A2_MOUSE (RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type I collagen; Flags: Precursor) HSP 1 Score: 321.242 bits (822), Expect = 1.064e-89 Identity = 367/803 (45.70%), Postives = 417/803 (51.93%), Query Frame = 0
Query: 318 VGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGP------------------------------------KGNPGHKGPPGLVGLPGQRGMPGPAGS---KGSSGSQGPVGPDGPRGKQGERGLQGITGP---------------VGPPGEPGAQGDPGSPGPAGEAGAT---------GMMGDRGSPGPQGMQGFP------------------------------------GPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPG 1021
+G +GPRG PG G PGPQGFQG GE G+ G GP G GP G G G+DG G+ G G +G GP G RG PG PGLPG KG +G G+DG KG G+ G KGE G+PG G G G G GERGR G GP G RG DG G G G IG GPPGFPG PG KG++G G G G GPRG+ G PG G G G PG +G G KG+ G G G G PGPRG PG G+ G G +G G+ G G KGESG KGE G +G +G PGP+G G+RG G G AGP GP G G PG RG+PGADG +G G G+RG G AG +G +GD GRPG PGL G RG PG G G GK GP G PG DG+ G +GP G +G G +G PG KG +G PG+ G G PG AG RG PG DG NG GPPGP G G +G G GP GFQG+PG G G GK GE GLPG+ GLPG G G RG PGE GA G G G RG +G PG DG G G +G+ G+ G G G+PG G PGPAG+ +G +G+ GP GP GPRG GERG G GP G G G +G+ G GP G GA G +G RG GP GM GFP GP G G G G G G KG G PG+ G PG GP GL G PG G G G RG G+ G G PG
Sbjct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core: 268.855 bits (686), Expect = 2.136e-72 Identity = 385/1052 (36.60%), Postives = 487/1052 (46.29%), Query Frame = 0
Query: 259 TGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQG---EAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNG---EKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRG------LPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGP---------------RGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNA------------GPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLR---------GEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLP---GQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGR----------PGLAGRNVNMIIYDCFVTILGTCNCLYITRVNKDGKVLK----DPLESMESRAPQGAEDLLEEWDQVDP-QACQEQKGPRVQWG---LMVVQDRKVILDQLG-HLETEVLQDCLDQLDLLVVWVPGVLKVSVANRDLLERRVSMDPKDYLGPLAPLVSAEKEENKDQLANLVHQVLVDALETRDHLEQLDQWDPQEDLAYPD----NLAKLEILDNLESVEIVASLAPRV 1236
G G G G PG+ G PG+PGP G + GE GP+ + + G G GS G QGPPGP G +G++G EAG GP GPPG G G GLPG DG +G G G +G TGP G RG G G PG G G GL G+ G +G +G++G G PG G GP+GPAGPRGE G G GP G +G PG+PG G PG G G PG G+ GA GP G G+QG +G+ G G PG G GP G G G E+G PG G PGP G G RG PG +G+ GP GP G+ G SG GP G G G +G G G LPG G+AG G +G +G G G G G G RG+PGA G GP G SGDRG GAAGP G G G PG RG G GP +G+ G GP+GE G G TG VG G G GP GP G +G GPPG G PG G GP G G +G+ GP G GP G +GE G G PG G +G G PG AG G G GL G G+ G G G RG PG GA+G PG G+ G G PG++G PG G GNPG GPPG G P G+RG PG G G++G+ GP G GP GK G RG G G VGP G+ GP G +G G+ GD+G PG +G +G PG+ G G+ G GL G G+QG PG VG G GP+G +G G G G+PGP G +G+ G G V+ YD G Y + L+ + +++S Q L E + +P + C++ + +W + ++ +D + + + + C+ Q + + AN+ + + + E +K+ L L+ + Q + + +AY D +L K +L VE+VA R
Sbjct: 309 NGLTGAKGATGLPGVAGAPGLPGPRGIPGPAGAAGATGARGLVGEPGPA-----GSKGESGNKGEPGSVGAQGPPGPSGEEGKRGSPGEAGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGIRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGP------KGPSGDPGKPGERGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTTGEVGKPGERGLPGEFGLPGPAGPRGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGDTGNTGRDGARGIPGAVGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGE------RGEVGPAGPNGFAGPAGAAGQPGAKGEKGTKGPKGENGIVGPTGSVGAAGPSGPNGPPGPVGSRGDGGPPGMTGFPGAAGRTGPPGPSGIAGPPGPPGAAGKEGIRGPRGDQGPVGRTGETGASGPPGFVGEKGPSGEPGTAGAPGTAGPQGLLGAPGILGLPGSRGERGLPGIAGALGEPGPLGISGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGSIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGP---------VGAVGPRGPSGPQGIRGDKGEPGDKGHRGL---PGLKGYSGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPVGKDGRSGQPGPVGPAGVRGSQGSQGPAGPPGPPGPPGPPGVSGGGYD-----FGFEGDFYRADQPRSQPSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWNSDYYWIDPNQGCTMDAIKVYCDFSTGETCI-QAQPVNTPAKNSYSRAQANKHVWLGETINGGSQF------EYNVEGVSSKEMATQLAFMRLLA-----NRASQNITYHCKNSIAYLDEETGSLNKAVLLQGSNDVELVAEGNSRF 1314 HSP 3 Score: 250.366 bits (638), Expect = 1.885e-66 Identity = 373/898 (41.54%), Postives = 429/898 (47.77%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPG------------LDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGR------EGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPL---GPKGTAGQSGRDGPKGES------GMKGELGQMGPRGLPGPTGSAGR---------RGRRGIRGPAGPPGPLGEPGP---------PGGRGMPGAD---GPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQ---------PGKIGPRGEPGA---------DGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGP---------PGPTGPSGERGTPGSPGPRGFQGMPGAPGKA---------GHNGKDGEAGLPGQTGLPGEQG---------------------KEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQ------GITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSP---GPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGL---TGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
PG +G +G +G G G+PG G G PG PG G PG G + L G P P VGPVGP G G GPPG G G +GE G G PGP G GPRG GLPG G G G G G TG G GLPG+ G PG G RG PG L G G GS GE G G PGS+G GP GP+G G+RG GP+GPPGLRG G G PG G G GPPG + G+ GP G ++GP GD+GRPG PG MGP +G PGS G GP G GP G PG++G PGP+ GP+G AG G GPKG S G +G G G RG PGP G+ G +G +G +GPAGPPG G PGP PG RG+PG GP+GP+G+ G G GAAGP G G G G+PG G +G G +G G PG+ G G PG G TG G G +G+PG +G PG G +G G+ G G G AGPRG PG G GP GP G G GE+GT G G G G G+ G A G G G+ G PG TG PG G KEG RG G++G +G G G G G G GP G PG G PG GP GL+G PG G+PG G +G G G +G GP G G G + G G G PGE G G+PGS GP G G G G+RG P GP G G PGP G G G G RG PG G G G+VG G GP G+ G PG KG RG PG +G SG+ G PG GL G
Sbjct: 180 PGFKGVKGHSGMDGLKGQPGAQGVKGEPGAPGENGTPGQAGAR--------GLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNPGTNGLTGAKGATGLPGVAGAPGLPGPRGIPGPAGAAGATGARGLVGEPGPAGSKGESGNKGEPGSVGAQGPPGPSGEEGKRGSPGEAGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPG---------NRGSTGPAG---IRGPNGDAGRPGEPG---LMGP---------RGLPGSPGNVGPSGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGERGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTTGEVGKPGERGLPGEFGLPGPAGPRGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGDTGNTGRDGARGIPGAVGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGEKGTKGPKGENGIVGPTGSVGAAGPSGPNGPPGPVGSRGDGGPPGMTGFPGAAGRTGPPGPSGIAGPPGPPGAAGKEGIRGPRGDQGPVGRTGETGASGPPGFVGEKGPSGEPGTAGAPGTAGPQGLLGAPGILGLPGSRGERGLPGIAGALGEPGPLGISGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGSIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGHRGLPGLKGYSGLQGLPGLAGLHG 1045 HSP 4 Score: 214.927 bits (546), Expect = 3.003e-55 Identity = 286/704 (40.62%), Postives = 332/704 (47.16%), Query Frame = 0
Query: 439 GPAGPRGERGREGPSGPPGLRGID-------------------------------------------GMTGAPGEPGSIGKPGPPGF------PGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGA------------PGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSG---------------DRGPPGAAGPKGKHGDTGRPGSPGLQGL---------------------RGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLP------GEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQG------------------FPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPG 1021
GP G RG RG+ GP+GP G G+D G+ G G PG++G PGP GF PG PG G G GP GSPG G G G+PGRPGE G +GP G GF G G PG G PG QG G GAPG NG+PG G +G G+ GR G G +G +G G +GP G GP GSAG G G GP G GP+G PGP GP+GP+G+ G G GA G G G G PG PG +G+ GS G G +G+PG +G +G PG G+ G+ G G G GP GPP GL G PG G PG G AG G PG G GP G GP G +G G PG GPR G+PG+PG G +GK+G GLPG G P G +G+ G+ GFPG +G G PG PG RG PGL G G PGP GN G +GPPG G+ G +G GPAG G G GP G G GK GERGL G G GP G G +G PG G AG +G G G G+PGP G +G PG G G PG G +G G +G+ GN G G G PG G G G+ G RGE G G SG GP G PG
Sbjct: 33 GPTGDRGPRGQRGPAGPRGRDGVDGPMGPPGPPGSPGPPGSPAPPGLTGNFAAQYSDKGVSSGPGPMGLMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGPRGPAGSPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGVKGHSGMDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGP---------AGPAGPRGEVGLPGLSGPVGPPGNPGTNGLTGAKGATGLPGVAGAPGLPGPRGIPGPAGAAGATGARGLVGEPGPAGSKGESGNKGEPGSVGAQGPPGPSGEEGKRGSPGEAGSAGPAGPP---GLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGIRGPNGDAGRPGEPGLMGPR---GLPGSPGNVGPSGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGERGH---PGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTTGEVGKPGERGLPGEFGLPGPAGPRGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGDTGNTGRDGARGIPGAVGAPGPAGASGDRGEAGAAGPSGPAGPRGSPG 718 HSP 5 Score: 210.69 bits (535), Expect = 5.606e-54 Identity = 295/759 (38.87%), Postives = 350/759 (46.11%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDG-------EGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGE---------PGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKM------------------------------------GPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGT---------------------------AGQSGRDGPKGESGMKGELGQMG---------------------PRGLPGPTGSAGRRG------------------RRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQ 885
GE GN+G+ G +G G PG G G G PG G GP GP L+ S G P D G G G PG +G GP G +G G+AG PG PG +GPRGL G PG G SG++G +G P GP GP G RG G G PGPKG G PG G +G G G +G G G+ G GP GP G +G +G +GP+GPPG +G+ G +G GE PG G PGP G G G+ G+ GA GP G G +GP G G G GE+G + G G G +G +G PG+ GAPGP G G RG G G GP GP+G+ G+ G GPKGE+G+ G G +G P G+ G G+AGR G + GIRGP G GP+G G G G PG G GP G+ G G PG AGP+G G G G PG +G RG PG G G+PG +G G PGA G G VG G+ G PG G G+ G GPPG+DG PG G G G G G G PGP G GP+G+ G G PGP G G GA G G G G+ G G PG++G G G G G G PG GL G+ G PG GP GP+G G GP G G GQ G GPAG +GS GSQ
Sbjct: 361 GESGNKGEPGSVGAQGPPGPSGEEGKRGSPGEAGSAGPAGPP--------GLRGSPGSRGLPGAD---------GRAGVMGPPGNRGSTGPAGIRGPNGDAGR---PGEPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRP-GPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGERGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTTGEVGKPGERGLPGEFGLPGPAGPRGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGDTGNTGRDGARGIPGAVGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGEKGTKGPKGENGIVGPTGSVGAAGPSGPNGPPGPVGSRGDGGPPGMTGFPGAAGRTGPPGPSGIAGPPGPPGAAGKEGIRGPRGDQGPVGRTGETGASGPPGFVGEKGPSGEPGTAGAPGTAGPQGLLGAPGILGLPGSRGERGLPGIAGALGEPGPLGISGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGSIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGA---VGPRGPSGPQGIRGDKGEPGDKGHRGLPGLKGYSGLQGLPGLAGLHGDQGAPGPVGP---AGPRGPAGPSGPVGKDGRSGQPGPVGPAGVRGSQGSQ 1092 HSP 6 Score: 203.371 bits (516), Expect = 1.221e-51 Identity = 307/710 (43.24%), Postives = 349/710 (49.15%), Query Frame = 0
Query: 248 GNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDP-FSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGP---------PGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPS---------------GPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPR---GEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPP---------GQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGD 920
GNRG G G G G+ G PG PG+ G G+PG PG N+ P G++GP P +GP GPRG G G PGP+ GP G PG G RG GL G G G DG G Q GPPG +G+ G G GP G GF GL G GT G G+ GE G PG G GP GP G RG G G +GP G G G +GAPG G+ G+ G G G+PG +G G G KG G G RGD+G GR G G G G G G G G GA GP G GPRG+PG G GP GP G AG +G G G G KG G G G+ GPTGS G G G GP GP G G+ GPPG G PGA G + G G+ G RGP G GP G+ G+TG G PG G +G G G G PG GP+ G PG G G G +GL G+ G +G PG G++GPP G G G PG AG G+PG+D GPPG G G GERG PGS GP G G PG G G GK G G PG G G G G RG G +G G G PG +G G PGL KG G +G PGL GL G +G PGP G +G +GP GP GP GK G G GPVGP G G+QG
Sbjct: 427 GNRGSTGPAGIRGPNGDAGRPGEPGLMGPRGLPGSPG---NVGPS---------GKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPK------------GPSGDPGKPGERGHPGLAGARGAPGPDGNNGAQ---GPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTTGEVGKPGERGLPGEFGLPGPAGPRGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGDTGNTGRDGARGIPGAVGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGEKGTKGPKGENGIVGPTGSVGAAGPSGPNGPPGPVGSRGDGGPPGMTGFPGAAGRTGPPGPSGIAGPPGPPGAAGKEGIRGPRGDQGPVGRTGETGASGPPGFVGEKGPSGEPGTAGAPGTAGPQGLLGAPGILGLPGSRGERGLPGIAGALGEPGPLGISGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSD---GPPGRDGQPGHKGERGYPGSIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGHRGLPGL---------KGYSGLQGLPGLAGLHGDQGAPGPV---GPAGPRGPAGPSGPVGKDGR---SGQPGPVGPAGVRGSQGS 1091 HSP 7 Score: 201.83 bits (512), Expect = 3.718e-51 Identity = 247/551 (44.83%), Postives = 280/551 (50.82%), Query Frame = 0
Query: 525 PGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAG---QSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPG------------------KIGPRGEPGADGKTGQVGPQGLQGLPG------------PMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPP------GPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQ---RGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGF------PGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGP---RGESGMMGPPGRPGLAG 1024
PG G G +G PG+ GAPGPQGF GP G PG G GP GP+G AG ++G DG G+ G GE G +GP+G G G+ G G +G++G +G G G+PG G +G PGA G +G GQ+G RG PG + GR G+PG G RGS G +GP G G ++GP G PG G GP+G GLPG G G KG TG PG G PG PG PRG PG G G G PGP G GE G G PG G QG PG G+ G G GEAG G G PG +G GSRG PG G G G PG RG G G+ GP G G G PG GP GL G PG G GP G G G GP+GP GPRG+ G G G GP G PG+PG +G PG G G G G G +G PGPQG+QG GPPG G PG G G G GE+G PG G PG GP G G PG GA G GP RG SG GP G G AG
Sbjct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core: 172.94 bits (437), Expect = 3.197e-42 Identity = 256/630 (40.63%), Postives = 298/630 (47.30%), Query Frame = 0
Query: 241 VDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPF-------SYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGE------GGPQGPTGPPGKRGLPGMP---------------GLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGE---------------------RGREGPSGPPGLRGIDGMTGAPGEPG------------SIGKPGPPGFPGIPGSKGDMGAGGPKGSP------------GLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKG---TAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGT---PGNAGPRGDPGTDGLNGPPGPPGPTGPS---GERGTPGSPGPRGFQGMPGAPGK 788
+ PG +G GD G+ GE G PG G G PG G G GPPGPQ Q GE+GP+ P S +VG G RG PG G PGP G +G++G G+ G GP G +G RG SG PG DG G+ G G GP G PG+RG G+P G G G RG PG GA G G++G++GE+G+ G GP GP G G RGE +G +G GP G GI G TG+ G G S G GPPG G PG+ G G GP G G++GPRGD G GR GE+G GPPG G G G PG+ GAPG G G GAPG+ G PG G +G AG G GP G SG G G G G PG G+ G GR G G GPPG G+PG G RG PG+ GP+G +G GP G+ GP GKHG+ RG PG G G G +GPRG P G QG+ G G PGDKG G PG G G PG AG GD G G GP GP GP GPS G+ G G PGP G G+ G+ G
Sbjct: 498 IGFPGPKGPSGDPGKPGERGHPGLAGARGAPGPDGNNGAQGPPGPQ---------GVQGGKGEQGPAGPPGFQGLPGPSGTTGEVGKPGERGLPGEFGLPGPAGPRGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGDTGNTGRDGARGIPGAVGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGEKGTKGPKGENGIVGPTGSVGAAGPSGPNGPPGPVGSRGDGGPPGMTGFPGAAGRTGPPGPSGIAGPPGPPGAAGKEGIRGPRGDQGPVGRTGETGASGPPGFVGEKGPSGEPGTAGAPGTAGPQGLLGAPGILGLPGSRGERGLPGIAGALGEPGPLGISGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGSIGPTG---AAGAPGPHGSVGPAGKHGN------------RGEPGPAGSVGPVGAVGPRG------------PSGPQGIRGDKGEPGDKGHRGLPGLKGYSGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPVGKDGRSGQPGPVGPAGVRGSQGS 1091 HSP 9 Score: 170.629 bits (431), Expect = 1.599e-41 Identity = 260/634 (41.01%), Postives = 286/634 (45.11%), Query Frame = 0
Query: 241 VDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLP---GKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRG---------------FPGLDGA---------------KGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGP------PGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRP---------GRPGESGKMGPPGKDGFNGEKGSPGSTGAPGP------------QGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGR---------------GMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAG 799
V PG G G G G G G +GFPG G G PG PG G P L AG P PD + Q GP G +G G QGP GP GFQG G +G G G PG G G GLP G GE G GE G GP+GP G RG G PG G KG G PG GA +G G+TG G G PG++G GP G +G RGE G GPSGP G R G+PGE G +G GP G G PG+KG+ G GPKG G+ GP G G G G G GPPG GF G G G G G +G GPRG G G G G G G G GP GE G G G GP+GL G G G G RG RG G G LGEPGP G G+ GA G +G G G GPPG G G G+ G PGS G G G+PG G G GK G RGEPG G G VG G +G GP G GDKG G G G PG G +G +G PG GL+G G PGP GP+G RG G GP G G G PG G G G G
Sbjct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core: 165.236 bits (417), Expect = 6.779e-40 Identity = 215/489 (43.97%), Postives = 247/489 (50.51%), Query Frame = 0
Query: 573 SGRDGPKGESGMKGELGQMGPRGLPGP------------------------TGS-AGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQ---------------GMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGS---PGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPG 1018
S R GP G+ G +G+ G GPRG G TG+ A + +G+ GP G +G GPPG G PG G GP G+ G+ PG GP G G G PG G G G PGR G RG G G RG PG G G G +G G+ G G PG +G+ G PG G GTPG AG RG PG G G PGP G G G G G GP G G G PG AG G GE GLPG +G G G G+ G G +GA G PG AG PGL GP G PGP G G G GLVG PG G G +G+KG GS G GP GP G++G+RG G G GP G PG +G PGS PG G AG G G+RGS GP G++G G G PG PG+MG RGLPGS PG+VG G+ GP GL G+ G G G GPRGE+G +G PG
Sbjct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core: 119.398 bits (298), Expect = 8.209e-26 Identity = 175/411 (42.58%), Postives = 198/411 (48.18%), Query Frame = 0
Query: 675 RGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPM---GPPGDKGLTG-------PPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKE---GSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQ------------GERGLQGITGPVGPPGEPGAQGDPG------SPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIP------------------------------GSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
+G G GPRGQ G GPRG G DG G GP G G P GLTG G PG G GPRG PG G PGP G GP+GE G PG GP G +G G+PGKAG +G G+ G PG+ G+ G QG G+ G PG +G G G GL+G+ G G+ G PG PG G PG G GL G G+ G PGPAG++GS GS GPVGP GP G GE G G GP GP G G G PG PG G G TG G G PG G G PGP GIP G PG +G +G PG GE+G GS G G GP+G GL GS G+RG PG G +G+MGPPG G G
Sbjct: 32 KGPTGDRGPRGQRGPAGPRGRDGVDGPMGPPGPPGSP------GPPGSPAPPGLTGNFAAQYSDKGVSSGPGPMGLMGPRGPPGAVGA---PGPQGFQGPAGEPGEPGQTGPAGPRGPAGSPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGVKGHSGMDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNPGTNGLTGAKGATGLPGVAGAPGLPGPRGIPGPAGAAGATGARGLVGEPGPAGSKGESGNKGEPGSVGAQGPPGPSGEEGKRGSPGEAGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTG 433
BLAST of collagen alpha-1 chain vs. SwissProt
Match: gi|124056489|sp|P02458.3|CO2A1_HUMAN (RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1 type II collagen; Contains: RecName: Full=Collagen alpha-1(II) chain; Contains: RecName: Full=Chondrocalcin; Flags: Precursor) HSP 1 Score: 320.472 bits (820), Expect = 4.015e-89 Identity = 375/649 (57.78%), Postives = 419/649 (64.56%), Query Frame = 0
Query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
E+G+ G+ G +GP GP G RG PG PGLPG KGHRG+PGLDGAKG G+ G KGESGSPG G GPMGP G GERGR GP+G G RG DG G G PG +G G PGFPG PG+KG+ G G +G G QGPRG+ G PG PG +G G PG DG G KGS G+ G G GFPGPRG PG G+ GPLGPKG G+ G G KGE G KGE G GP+G PGP G G+RG RG G GP GP GE G PG RG PG DG +GPKG G+RGP G AGPKG +GD GRPG PGL G RG GR G G GK+GP G PG DG+ G GPQG +G PG MG PG KG G PG+ G G PG G RG PG DG G GPPGP GP+GERG G+PGP GFQG+PG PG G GK G+ G+PG+ G PG G G RGFPGERG+ G+ G G RG G PG DGP G GP G PG +GPPGL G+PG+RG G AG KG G G GP+G GK G RGL G GP GP G G +G+ G PGPAG AGA G G+RG GP G GF GPPG G PG G +G G KG+ G PG G G PGP G TG+ G KGARG GP G +G G GR
Sbjct: 256 EAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGR 904 HSP 2 Score: 194.512 bits (493), Expect = 7.176e-49 Identity = 321/780 (41.15%), Postives = 369/780 (47.31%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKG---HRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGP---------------SGPPGLRGIDGMTGAPGEPGSIGK---PGPPGFPGIPGSKGDMGAG------------GPKGSPG---------------LQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPG------PRGA------------------PGLNGSPGPLGPKGTAGQSGRDGPKGESGM------------------KGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPM------GPPGDKGLTGPPGQDGNPGTPGNAGP---RGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGL------------PGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGP------KGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITG 907
G QG RG+ G G G G G PGT G+PG G G PG AG P P Q GP+GP+G G PG GF+G+QG G+ GP GP G+ GP G G G GE G G GP G G PG RG PG GL GPKG RG GL G KG G G GE G PG+ G G G AGP+G+ G G G PG+ G G GA GEPG G+ PG PG G+PG G+ GA G +G+PG G GD G PG G G +GP G+ GF GE+GSPG+ G GP+G PG P+GA PG G+ G GPKG G G GP+G G GE G++GP PGP GSAG RG G RG GPPGP G GPPG G PGA G G GQ GD G PG GP G +PG QG G G G RG G G G PGA G+ G G G G PGP GP G +G +GPPG+ G PG G AGP +G+PG DG +G GPPGP G +G+RG G PG RG +G PG PG +G GK G G G G GE G+EGS PG G G GA G++G+ G G G PG PGP G G +G G G G G GPAG++G G QGP G G G+ GERGL+G G
Sbjct: 387 GAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPG--------------IAGAPGFPGPRGPPGPQGATGPLGPKG---QTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGP---PGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSG---------APGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGS---PGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRG 1134 HSP 3 Score: 97.0561 bits (240), Expect = 6.175e-19 Identity = 156/399 (39.10%), Postives = 185/399 (46.37%), Query Frame = 0
Query: 694 GEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGP---------------------------------------------------TGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEP---------------GPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRN 1026
G+PG G+ G GPQG +G PG G PG KG G PG DG G G G +G+ G+ G NG PGP GP GP+G RG G+ GPRG G PG+PG AG + G G+ G PG +G+ G+PG G G G G GP G GP G G G PG+ G G++ GP G G +G QG GP G GK+G RG G GP+GPPGE GA G+ G PG G AG G G+RG G G +G G PG PG PG+ G RGL G G+ G G VG G P G G+ G PG KGA GEPG GE G+ G PG GL G++
Sbjct: 258 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGAS------------------GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQ---GPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKD 635
BLAST of collagen alpha-1 chain vs. nr
Match: gi|1069680341|ref|XP_018301816.1| (PREDICTED: fibril-forming collagen alpha chain-like [Trachymyrmex zeteki]) HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 490/786 (62.34%), Postives = 556/786 (70.74%), Query Frame = 0
Query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
G RG GR G+ GRPG+ G+PG PG PG PG PGPPGP P++ + QL S E KGP+ P+ Y+QAQVGP+GP+GSPG GPPGPQGFQG +GE G+ G PGPPG GPRGL GLPGKDG SG+DGE G G GP G+RGLPG+PGLPG KGHRGFPGLDGAKG G +GEKG GSPGS+G VGPMGPAGPRGERGREG GPPGLRG+DG+ G+PG+PG IGKPG PGFPG PG KGD G GP G+ GLQGPRG+SGRPG+PGE+G GP GKDG GE+G+ G+ G G GFPG RG G G+PG G KG G G G KG++G+KG+ G GPRGLPGP G+ G+RG+RG+RGP G GP GE G PG RG+PG+DGPSGP+GQSGDRGPPGA G KG GD GRPG GLQG RG GR G G+ G G RG GADGK G+ G GLQGLPGP+G PG++G G G+DG PG G GPRGD G +G G G PGP G G RG G GPRGFQG+PGA G G GKDGEAG+ G+ G PG G G RGFPGERG IG PG G RGE G G DG G PG KG+ G G PGL+GLPG RG+PG G KG G+ GP+GP+GP G GERG QG GP GPPGEP +GDPGSPGP GE GA G G+RG G QG QGFPGP G+ G PG+ G RG PG KGEQGNPG +G GE G G GL G+KG RG+PG RGE+G+MGPPG G G
Sbjct: 358 GIRGSPGRPGDAGRPGDSGYPGQPGTPGIPGPPGPPGPVPDVSLYYQQLALSQANEDKGPTDAAASLYGPETLPYIQAQVGPMGPQGSPGSPGPPGPQGFQGTRGETGELGSPGPPGMPGPRGLPGLPGKDGISGEDGETGLPGSPGPVGQRGLPGIPGLPGLKGHRGFPGLDGAKGEQGISGEKGSMGSPGSMGLVGPMGPAGPRGERGREGSPGPPGLRGLDGIAGSPGQPGVIGKPGSPGFPGNPGIKGDQGLQGPTGNQGLQGPRGESGRPGQPGETGPQGPQGKDGIPGERGAIGAIGPVGVIGFPGARGQSGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDAGIPGPRGLPGPPGNEGKRGKRGMRGPTGSVGPSGERGVPGERGLPGSDGPSGPQGQSGDRGPPGAVGSKGATGDPGRPGPTGLQGARGLMGRPGASGKTGNPGERGIQGADGKPGEQGLPGLQGLPGPIGTPGERGYPGERGKDGEPGNAGPPGPRGDTGKEGPPGVQGLPGPPGSDGARGLLGPTGPRGFQGLPGAAGNPGVPGKDGEAGVQGRPGPPGMVGDRGERGFPGERGLIGHPGPVGPRGETGIQGSDGLIGLPGSKGDKGSFGSPGLLGLPGARGLPGEFGQKGERGTIGPIGPEGPSGHIGERGPQGEVGPSGPPGEPAERGDPGSPGPIGEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLLGSRGEIGAPGPIGLTGAKGIRGDPGIRGEAGLMGPPGIIGHVG 1143 HSP 2 Score: 312.768 bits (800), Expect = 9.486e-84 Identity = 351/788 (44.54%), Postives = 414/788 (52.54%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSY-MQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPG---PPGS---------------LGPRGLSGLPGKDGESG---QDGEGGPQGPTGP---------------------PGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPS---GPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSG---ERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVG 982
PG+ G G+ G G G PG +G G PG+PG PG+ G G P L+ + +Q GEKG P S + +GP GPRG G +G PGP G +G G AG G PG PGS GP G GL G GESG Q GE GPQGP G PG RG G PG PG G +G PGL G +G G TG KG++G PG G GP G G RG+RG GP+ GP G RG+ G G PG G G G G G PG+ G GA G G PG G +G G GRPG SGK G PG+ G G G PG G PG QG PGP G PG G PG G G G +G GP+G++G +G G +GLPGP GS G RG+ GP GP G G PG G G+PG DG +G +G+ GPPG GD G G PG +GL G PG +GPRG+ G +G G G G G +G G PG +G PG +GL G GQ G GT G GP G G G GP G GP+GP G ERG PGSPGP G G PG PG+ G +G G G PG GL G G +G RG+PG +G G+PG G RGE G PG G G G +G+PG +G GL+G PG G GP+G G+ G G G G +G G+ G G GP+G PG PG G G G G G TG G +G PG +G+ G+PGSPG +G RGL G+ GE G PG +G
Sbjct: 485 PGKDGISGEDGETGLPGSPGPVGQRGLPGIPGLPGLKGHRG-FPGLDG--AKGEQGISGEKGSMGSPGSMGLVGPMGPAGPRGERGREGSPGPPGLRGLDGIAGSPGQPGVIGKPGSPGFPGNPGIKGDQGLQGPTGNQGLQGPRGESGRPGQPGETGPQGPQGKDGIPGERGAIGAIGPVGVIGFPGARGQSGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDAGIPGPRGLPGPPGNEGKRGKRGMRGPTGSVGPSGERGVPGERGLPGSDGPSGPQGQSGDRGPPGAVGSKGATGDPGRPGPTGLQGARGLMGRPGASGKTGNPGERGIQGADGKPGEQGLPGLQGLPGPIGTPGERGYPGERGKDGEPGNAGPPGPRGDTGKEGP---PGVQGLPGPPGSD---GARGLLGPTGPRGFQGLPGAAGNPGVPGKDGEAGVQGRP---GPPGMV------GDRGERGFPGERGLIGHPGPVGPRGE---TGIQGSDGLIGLPGSKGDKGSFGSPGLLGLPGARGLPGEFGQKGERGTIGPIGPEGPSGHIGERGPQGEVGPSGPPGEPAERGDPGSPGPIGEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLLGSRGEIGAPGPIGLTGAKGIRGDPGIRGEAGLMGPPGIIGHVGPSGPPGNIGPLGAPGLPGVKGDAGDTGHPGNPGPIGNPGLPGIDGIKGESGSPGSQGPTGSQGPQGPPGERGLS------GLPGSPGPIGNRGLRGAPGEIGQPGKIG 1245 HSP 3 Score: 301.212 bits (770), Expect = 4.474e-80 Identity = 363/830 (43.73%), Postives = 424/830 (51.08%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPG---------------------PQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPG---------------PPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKG---HRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPG------------PLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPG------SPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKG------LTGPPGQDGNPGTPGNAGPRGDPG---TDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPG 1006
PGE+G G G +G G PG G GTPG PG PG G PG P+ P N+ ++ G +GP+ VGP G RG PG +G PG G G QG++GD GPPG P G G RGL G PG G++G GE G QG G PG++GLPG+ GLPGP G RG+PG E+G+ G PG+ GP GP G G G G +G GPPG G G+ G G G G PG G PG+PG G+ G G G PG+ G RG+ G PG G G GP G G G +GS G G PG +G G G+PGL G PG G GE G KGE G +GP G GP+G G RG +G GP+GPPG P+GEPG PG PG GP G +G G GP G G G GD G PG +PGL G RG G GP G G G RG+PG G+ G +GP G+ G GP GPPG+ G L G G G+ G PGN GP G+PG DG+ G G PG GP+G +G G PG RG G+PG+PG G+ G G PG+ G PG+ G EG PG G IGSPG PG GE G G G PG PG G PG KGPP G+PG G GP G G SG G +G G RG +GE GLQG+ GP GP G+PG G G G GE G G G RG G+QG PG PG+ G G+ G GLPG GE G G+ G G PGP G G PG +G GE G
Sbjct: 649 IPGERGAIGAIGPVGVIGFPGARGQSGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDAGIPGPRGLPGPPGNEGKRGKRGMRGPT--------GSVGPSGERGVPGERGLPGSDGPSGPQGQSGDRGPPGAVGSKGATGDPGRPGPTGLQGARGLMGRPGASGKTGNPGERGIQGADGKPGEQGLPGLQGLPGPIGTPGERGYPG------------ERGKDGEPGNAGPPGPRGDTGKEGPPGVQGLPGPPGSDGARGLLGPTGPRGFQGLPGAAGNPGVPGKDGEAGVQGRPGPPGMVGDRGERGFPGERGLIGHPGPVGPRGETGIQGSDGLIGLPGSKGDKGSFGSPGLLGLPGA------------RGLPGEFGQKGERGTIGPIGPEGPSGHIGERGPQGEVGPSGPPGEPAERGDPGSPGPIGEPGAPGN---PGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLLGSRGEIGAPGPIGLTGAKGIRGDPGIRGEAGLMGPPGIIGHVGPSGPPGNIGPLGAPGLPGVKGDAGDTGHPGNPGPIGNPGLPGIDGIKGESGSPGSQGPTGSQGPQGPPGERGLSGLPGSPGPIGNRGLRGA---PGEIGQPGKIGAEGP---PGPPGLIGSPGVPGHTGEIGPEGPTGKPGPPGIGGRPGDKGPP---GVPGAAGPSGPPGLPGQSGPTGSIGLTGERGLKGETGLQGVEGPQGPRGKPGPAGVEGIKGDHGEEGQKGAKGHRGF---TGLQGLPGSPGLIGEKGIPGLPGLPGKDGEPGIRGNPGREGNPGPIGPAGNPGPRGPLGEEG 1431 HSP 4 Score: 220.32 bits (560), Expect = 2.257e-54 Identity = 269/625 (43.04%), Postives = 311/625 (49.76%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLE----PFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGI---PGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPG---STGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGM---KGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPG------PPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIG------------------------PRGQPG------------KIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKE 813
PGEQG G G G G PGE G+PG G G PG GPPGP+ + P + L P P + +GP GPRG G+ G G G G+ GEAG G PGPPG +G RG G PG+ G G G GP+G TG G GL G+PG G KG G PGL G G G GE G+ G G+IGP+GP GP+G GERG +G GP G G G PG PG IG+PG PG PG G +G G GP+G GL G +GD G PG GE G PG G GE G+PG TGA G +G PG RG GL G PG +G G +G G GP G G+ KG+ G G G PGP G+ G G GI+G +G PG G G PPG RG+ G G GP G G RG PG G GK G G PG PGL G G PG G P G PG + GP G G G+ G G GLQG+ GP GP G G G G G+ G G G +G G GL G PG PG G G G PG PG G G+ G PG+ G+ G G AG PG G GE+G++
Sbjct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core: 199.904 bits (507), Expect = 5.230e-48 Identity = 279/688 (40.55%), Postives = 323/688 (46.95%), Query Frame = 0
Query: 410 LDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPP----------------GLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDM------GAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQM---GPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPR------GEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTD---------------------GLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQT---GLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQ---------------GERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGAT------GMMGDRGS---PGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPG 1018
L G S G GSPG G G G +G G+ G G GPP L + G S+ GP P I G M G+ GP G G QG RG++G G PG G GP G G G+ G G G G G PGP G GL G PG G KG G G DG KGE G+ GE G M G GL GP G AG RG RG G PGPPG RG+ G G G G G G PG G G GD G G G QGL+G G G GQPG+ GP+ G PG G G +GP G+ G PG G G G G PG G PG PG+ G +GD G G G GP G GPSGERG PG +G+PG+ G +G G+ G+ G PG G G+ G+ G G G RG +G PGA G G G G+ G G PG +G PG +G PG +G PG+RG PG G G G+ GP GP G GK+ G RGL G TGP G G PGA G+PG PG GEAG GM+GDRG PG +G+ G PGP G G G+ G GL G G +G+ GS G P GL GLPG++G GE G +GE G +GP G
Sbjct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
BLAST of collagen alpha-1 chain vs. nr
Match: gi|1108463074|emb|CRL08317.1| (CLUMA_CG021280, isoform A [Clunio marinus]) HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0 Identity = 527/1011 (52.13%), Postives = 609/1011 (60.24%), Query Frame = 0
Query: 10 WGSHLVPTFKMTRKKQDGISRNHRGMSMKHRLSPTMTGLGLVALVLLASQGVGAKPEALPEAKPNPEAKPQDPNEEYSYQ--DYGEYGNFGQDYYGEYGEESANGNPPPEYDTNINGVDPCAEVECQPVECPVETYTPMGECCPVCPQGFSEPEETV-RPSFPSPPPYEPPYEPPFEPPYEEPYVPPYEEPYVPPYEDPYTPPYAPPYEEPYEPPYEDPYAPPYEQPDSETPVMVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGG-EKGPS--PDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMM 1014
+ H + K K + ++ R S K +L + + V LV +AS K + + D E Q + E +F D +YGEE N NG E P E F +P++ + R P+P P P F +E + EE E P + E P + T V+ P RG+ G GE G PGE G PG+PG PG PG PGPPGP P++ + QL GG +KGPS P+ F YMQA GPVG RG G G PGPQGFQG +GE GD GPPGP G+ G G G PGKDGE+G+DGE GP G G PG RGLPGMPG+PG KGHRG G DG KG GS+GEKG GS G IGP G G AGPRGERGREGP GP GLRGIDG+ G PG G+IGKPG PGFPG PG+KGDMG+ GPKGS G QG RG+SGRPG GE+G G GKDG +GEKGSPGS G GP GFPGPRG GLNGSPG G KG G G G KGE+G+KGE+G GPRG+PG G G+RG+RG++GP GP GP GE G PG G+PG DG +GPKGQSGDRG PG GPKG GD G PG G+QGLRG PGR+GP G+PG G RG PG+DGK G++GPQGLQGLPGPMG GDKGLTG G+DG G G GPRGD G+ G G GPPGP G GERG G PGP GFQG+PG+PG G GKDG+ G PG G G G G RGFPGERG G PG G +GE G G DGPPG PG G GH+G PG+VG+PG RG G G KG G G GP+GP G+ GERG QGI GP GPPGEP +G+ G+PGP GE GA G +G+RG+ G QG+QGFPG PG G PG G RG G+KG+QG+PG G PGE G GL G G KG RGEPG RGESG+M
Sbjct: 868 YKVHFIDAIK---KIKPSVTEQFR-KSFKMKLKNKLIVIACVLLVFIASIDAAEKESKKKKKSKKVKNVQSDAAREPQAQQPNLDENNDFYPDENYDYGEED-----------NFNG----------------EALQPESERVEASTVFFRQPDDEIPRTRRPNPEPIVAP----FSCMHEGKWYREREEFR----EGPGGCSVCLCVNTQVKCNDEACPRPTTTTTPAPTTPFVNGP-----RGELGTDGERGEPGERGQPGSPGTPGIPGSPGPPGPPPDMSYYSQQLADQMGGSDKGPSYGPEAFQYMQASTGPVGARGPTGPVGSPGPQGFQGIRGEPGDSGPPGPHGAPGLMGPPGPPGKDGENGEDGEAGPLGAPGTPGPRGLPGMPGVPGVKGHRGLTGQDGPKGETGSSGEKGNVGSMGPIGPPGSPGAAGPRGERGREGPPGPQGLRGIDGIQGPPGPTGAIGKPGAPGFPGSPGNKGDMGSQGPKGSQGQQGARGESGRPGLTGEAGPPGISGKDGASGEKGSPGSQGPSGPIGFPGPRGPAGLNGSPGEPGVKGIPGVQGERGFKGEAGIKGEIGAPGPRGIPGALGPEGKRGKRGMKGPTGPQGPQGERGSPGIIGLPGPDGVAGPKGQSGDRGAPGTQGPKGSTGDVGAPGVQGVQGLRGLPGRMGPIGKPGAQGERGIPGSDGKAGEMGPQGLQGLPGPMGLQGDKGLTGERGKDGEQGPQGQPGPRGDNGSPGSPGNHGPPGPPGNDGERGPSGQPGPPGFQGLPGSPGTQGLAGKDGQQGPPGNPGQAGAPGNRGDRGFPGERGPTGLPGLQGAKGETGVQGSDGPPGPPGAVGMKGHQGSPGMVGIPGIRGPSGIPGEKGERGLTGNQGPEGPPGRIGERGPQGIVGPPGPPGEPAERGEQGAPGPQGETGAPGALGERGAQGAQGLQGFPGSPGAVGLPGAKGERGFSGNKGDQGSPGVAGVPGEQGSMGLVGATGPKGTRGEPGLRGESGLM 1834 HSP 2 Score: 318.546 bits (815), Expect = 2.035e-85 Identity = 354/882 (40.14%), Postives = 428/882 (48.53%), Query Frame = 0
Query: 254 GRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPP---GSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGP------MGPAGPRGERGREGPSGPPGL---RGIDGMTGAPGEPGSIGKPGPP---GFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGD------------------------------TGRPGSPGLQGL---------------RGSPGRIGPRGQPGKIGPRGEPGADGKTGQ---------------VGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGT---------------------DGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPP---------------GGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQ---GFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPG 1021
G GE G G +G PGTPG G PGMPG PG + G RG G GP G G G++G G GP GPP G+ GPRG G G G G G G QGP GP G G PG PG PG G++G G G KG+ G G +GESG PG G GP G +G +G G +GPSGP G RG G+ G+PGEPG G PG GF G G KG++GA GP+G PG GP G G+ G G +G GP GE+GSPG G PGP G GP+G G G+PG GPKG+ G G G +G G++G G+MGP G P G+ G RG G G AG GP G G PG G+ G G +G +G+ G++GP G GP+G +G G PGSPG QGL G+PG G RG PG+ GP G PG G G+ VG +G QG PG +G PG +G +G PG+ G G GN GP G PG G G PGP G TG G G G+ G +G QG PG+PG G G GE G G G+QG G G PGE+G++G GA G +G G PGL G G PG +G GH GPPG+ G G+ G PG G++G+ G GP G G G G +GL G GP GP G+ G G PG+ G G+ GA G G+ G+PG +G + G PGP G G PG +G +G G G+QG PG G PG+ GP G G G +G RGE GP+G G +GP G+ G
Sbjct: 1190 GENGEDGEAGPLGAPGTPGPRGLPGMPGVPGVK-----------------------------------GHRGLTGQDGPKGETGSSGEKGNVGSMGPIGPPGSPGAAGPRGERGREGPPGPQGLRGIDGIQGPPGPTGAIGKPGAPGFPGSPGNKGDMGSQGPKGSQGQQGARGESGRPGLTGEAGPPGISGKDGASGEKGSPGSQGPSGPIGFPGPRGPAGLNGSPGEPGVKGIPGVQGERGFKGEAGIKGEIGAPGPRGIPGALGPEGKRGKRGMKGPTGPQGP------QGERGSPGIIGLPGPDGVAGPKGQSGDRGAPGTQGPKGSTGDVGAPGVQGVQGLRGLPGRMGPIGKP---GAQGERGIPGSDGKAGEMGPQGLQGLPGPMGLQGDKGLTGERGKDGEQGPQGQPGPRGDNGSPGSPGNHGPPGPPGNDGERGPSGQPGPPGFQGLPGSPGTQGLAGKDGQQGPPGNPGQAGAPGNRGDRGFPGERGPTGLPGLQGAKGETGVQGSDGPPGPPGAVGMKGHQGSPGMVGIPGIRGPSGIPGEKGERGLTGNQGPEGPPGRIGERGPQGIVGPPGPPGEPAERGEQGAPGPQGETGAPGALGERGAQGAQGLQGFPGSPGAVGLPGAKGERGFSGNK---GDQGSPGVAGVPGEQGSMGLVGATGPKGTRGEPGLRGESGLMGPPGRPGEPGQVGAPGSQGQIGHPGPPGIKGAAGENGRPGNPGAQGNPGPMGPEGAKGEHGSDGPQGLPGNQGPPGPTGDRGLPGLPGATGSVGQRGARGPPGEFGAPGKEGKEGPAGVPGPQGDQGLPGPVGLQGPEGPSGKQGPPGIAGRPGDKGPQGQHGNAGERGLRGEHGPQGIDGPIGPRGKSG 2024 HSP 3 Score: 308.531 bits (789), Expect = 3.298e-82 Identity = 367/919 (39.93%), Postives = 428/919 (46.57%), Query Frame = 0
Query: 245 GEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPG---MPGPPGPQPNLEPFINQLQQSAGGEKGPS-PDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGI------DGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPG---RPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGS------AGRRGRRGIRGPAGPPGPLGE------------------------------------PGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRG---------------SPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPG---------------------DKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTG---PSGERGTPGSPGPRGFQGMPGAPGKAGH---------NGKDGEAGLPGQTGL---------------PGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGP------GPKGNPGHKGPP------GLVGLP---------GQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGE---RGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPG 1021
GE G G+AG LG G PG G PG PG+PG G + G GP+ + + GEKG G GPRG G +GPPGPQG +G G GPPGP G++G G G PG G G G GP+G G G RG G PGL G G G G DGA G E GSPGS GP GP+G GPRG G G G PG++GI G G G G IG PGP G PG G +G G G KG G QGP+G+ G PG PG G GP G+ G G G+ G G+ G G PG +G GL G PG +GP G G G G G G GE+G G +GLPGP G G RG+ G +GP G PGP G+ PG PG +G+ G DG GP G G G PG G +G G+ G G PGLQG +G + G G +G PG +G G G G G+ G +GL G GP GPPG ++G G PG G G PG G RG G GL G PG PG G GERG G+ G +G G+ G PG+ G G GE GL G++GL PG QG+ G G PG +GA G G PG G G PG GP G GP+G PG++GPP GL GLP G RG PG G+ G G +GP G GP+G QG GLQG GP G G PG G PG GP G+ G G G RG GPQG+ G GP G G PG G+KG++G+ G+ G G G GL GLPGS G GE G G SG+ GPPG G
Sbjct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core: 301.982 bits (772), Expect = 4.437e-80 Identity = 353/850 (41.53%), Postives = 418/850 (49.18%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSY----MQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGE------------RGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGP---RGDSGRPGRPGESGKMGPPGKDG------------------------------------FNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPR---------GLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDR------------------------GPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRI------GPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGP---GLDGPPGGPGPKGNPGHKGPPGLV---GLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLT 993
PG QG RG G G G G +G PG PG PG+PG G G Q P +Q QQ A GE G + + G G +GSPG QGP GP GF G +G AG +G PG PG + G+PG GE G GE G +G G PG RG+PG G G +G RG KG G G +GE GSPG IG GP G AGP+G+ +G G G PG++G+ G+ G PG G IGKPG G GIPGS G G GP+G GL GP +GD G G G+ G+ GP G+ G F G GSPG+ G G G GP G PG G+PG G +G G+ G G G G KGE G G G+ G GS G G GIRGP+G PG GE RG+ G GP GP G+ G+R GP G G G G+ G G+ GLQG GSPG + G RG G G +G PG G G+ G GL G GP G G+ GL G G G PG PG G G PG+ G G PGPPG G +GE G PG+PG +G G G G G +G DG GLPG G PG G G G PG G++G GA G GE G P G +GP G PGP+G+ G GP GL G G++G PG AG G G QG G G RG +GE G QGI GP+GP G+ G G+ G+ G G++GA G G RG G+QG PG PG+PG G+ G GL G GE G G G G GP G++
Sbjct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core: 245.358 bits (625), Expect = 5.135e-62 Identity = 295/763 (38.66%), Postives = 348/763 (45.61%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGRE---------------------------------GPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPG---PQGFPGPRGAPGLNGSPGPLGPKGTAGQ---------------------SGRDGPKGESGMKGELGQMGPRGLPGPTG------------SAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAA---------------------------GPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPR---GKQGERGLQGIT 906
+PGE G +G G GE G GE G G G PG G+PG GP+ ++ G KGP+ GP G RGSPG+ G PGP G G +G++GD G PG G G G G PG G G G G GP G PG +G G+PG G G G GL G G +G G+KG +G G G GP G GPRG+ G G G GL G DG G PG PG G PG G G PG +G P G PGLQG +G++G G G G G G G +GSPG G PG P G PG +G GL G+ GP GP G G+ G GP+GE+G G LG+ G +G G G + G RG G +G G PG G PG G G+ GA GP G +G+ G RG G G KG G+ GRPG+PG QG G G G +G+ G GP+G PG G G G +GL GLPG G G +G GPPG+ G PG G GP G PG G G PGP G GP GP G QG PG G+ G G G+ G G+ GL GE G +G G G RG G PG G +G+ G G KG+ GH+G GL GLPG GMPG G G+SG QGP G GPR G+ G G QGI+
Sbjct: 1380 SPGEPGVKGIPGVQGERGFKGEAGIKGEIGAPGPRGIPGALGPEG---------KRGKRGMKGPT--------GPQGPQGERGSPGIIGLPGPDGVAGPKGQSGDRGAPGTQGPKGSTGDVGAPGVQGVQGLRGLPGRMGPIGKPGAQGERGIPGSDGKAGEMGPQGLQGLPGPMGLQGDKGLTGERGKDGEQGPQGQPGPRGDNGSPGSPGNHGPPGPPGNDGERGPSGQPGPPGFQGLPGSPGTQGLAGKDGQQGPPGNPGQAGAPGNRGDRGFPGERG------PTGLPGLQGAKGETGVQGSDGPPGPPGAVG---MKGHQGSPGMVGIPGIRGPSGIPGEKGERGLTGNQGPEGPPGRIGERGPQGIVGPPGPPGEPAERGEQGAPGPQGETGAPGALGERGAQGAQGLQGFPGSPGAVGLPGAKGERGFSGNKGDQGSPGVAGVPGEQGSMGLVGATGPKGTRGEPGLRGESGLMGPPGRPGEPGQVGAPGSQGQIGHPGPPGIKGAAGENGRPGNPGAQGNPGPMGPEGAKGEHGSDGPQGLPGNQGPPGPTGDRGLPGLPGATGSVGQRGARGPPGEFGAPGKEGKEGPAGVPGPQGDQGLPGPVGLQGPE---------GPSGKQGPPGIAGRPGDKGPQGQHGNAGERGLRGEHGPQGIDGPIGPRGKSGPPGNEGAKGDR---------GDSGAKGSKGHRGLVGLQGLPGSPGMPGEKGLTGNSGLQGPPGESGPRGPPGRDGGLGPQGIS 2098 HSP 6 Score: 229.565 bits (584), Expect = 3.922e-57 Identity = 259/610 (42.46%), Postives = 297/610 (48.69%), Query Frame = 0
Query: 478 GPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPG------------KDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQM---------------GPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGL------RGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQG------------------ER---------GLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGG------RGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPG 1021
GP F + S G +GA GP G G GP+G G G PG+SG GP G KDG NGE G G GAPG PGPRG PG+ G PG G +G GQ G G G SG KG +G M G RG GP G G RG GI+GP GP G +G+PG PG G PG G G +G G +G GA G G+ G TG G PG+ G +GSPG GP G G GPRG G +G G+ G +G+ G+ G G G+ G+ G G G G PG GP G G G+ GP GP GP G G G G PGP G G G G G G G G G G PG QG +G RG PG G IG PGA +GE G PG DG G GP+ G +G PG +GL G +G+ G +G G QGP G GPRG G ER G QG+ G G G G G G PG G+AGA G GDRG PG +G G PG G G G+ G G G KG QG+PG VG PG GPSG+ G G +G G GP GPPGR G
Sbjct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core: 190.274 bits (482), Expect = 6.108e-45 Identity = 240/576 (41.67%), Postives = 294/576 (51.04%), Query Frame = 0
Query: 523 GPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLG--PKGTAGQSG------RDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGA------------------DGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNA---------------GPRGDPGTDGLNGPPGPPGPT---GPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGP---AGSKGSSGSQGPVGPDGPRGK---QGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGE------------------------PGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
GP G+ G +GE+G PG G PG G PG G+PG G P + + A Q G GP+ M+ G +G RG GP GS G +G +GIRG G GP G G PG G PG G G G+ G+ GP GA G G G G PG PG++G RG G+ GP+G+ G G +G G+ G+ G GPQGL+G+ G GPPG G G PG G PG+PGN G RG+ G GL G GPPG + G SGE+G+PGS GP G G PG G AG NG GE G+ G G+ GE+G +G G GE GA G G PG G G G G G GP+G G +G PG++GLPG G+ GP +G +G+ G+QGP G G G QG +GL+G+ G +GP G+PGAQG+ G PG G+AG GPQG+QG PGP G+ G G+ G RG G +G QG PG G G PGP G GLPGS G +G G+ G GPPG PG AG
Sbjct: 1065 GPRGELGTDGERGEPGERGQPGSPGTPGIPGSPGPPGPPPDMSYYSQQLADQMGGSDKGPSYGPEAFQYMQASTGPVGARGPTGPVGSPGPQGFQGIRGEPGDSGPPGPHGAPGLMGPPGPPGKDGENGEDGEAGPLGAPGTPGPRGLPGMPGVPGVKGHRGLTGQDGPKGETGSSGEKGNVGSMGPIGPPGSPGAAGPRGERGREGPPGPQGLRGIDGIQGPPGPTGAIGKPGAPGFPGSPGNKGDMGSQGPKGSQGQQGARGESGRPGLTGEAGPPGISGKDGASGEKGSPGSQGPSGPIGFPGPRGPAGLNGSPGEPGVKGIPGVQGERGFKGEAGIKGEIGAPGPRGIPGALGPEGKRGKRGMKGPTGPQGPQGERGSPGIIGLPGPDGVAGPKGQSGDRGAPGTQGPKGSTGDVGAPGVQGVQGLRGLPGRMGPIGKPGAQGERGIPGSDGKAGEM---------GPQGLQGLPGPMGLQGDKGLTGERGKDGEQGPQGQPGPRGDNGSPGSPGNHGPPGPPGNDGERGPSGQPGPPGFQGLPGSPGTQGLA---GKDGQQGPPGNPGQAG 1628
BLAST of collagen alpha-1 chain vs. nr
Match: gi|1009368391|gb|KYM93308.1| (Collagen alpha-2(I) chain [Atta colombica]) HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 492/820 (60.00%), Postives = 555/820 (67.68%), Query Frame = 0
Query: 215 EEPYEPPYEDPYAPPYEQPDSETPVM--VDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGE-KGPS-------PDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
EE D P E SE+ + V PG RG GR G+ GRPG+ GFPG PG PG PG PGPPGP P++ + QL S E KGPS P+ SY+Q QVGP+GPRG PG GPPGPQGFQG +GE G+ G PGPPG GPRGL GLPGKDG SG+DGE GP G G G+RGLPG+PGLPG KGHRGFPGLDG KG G++GEKG GSPG +GPVGPMGPAGPRGERGREGPSGPPGLRG+DG+ G PG+PG IGKPG PGFPG PG KGD G G G+ +SGRPG+PGE+G GP GKDG GEKG+ G+ G G GFPG RG PG G+PG G KG G G G KG++G+KG+ G GPRGLPG G+ G+RG+RG++GP G GP GE G G RG PG+DGP GP+GQ GDRGPPGA G KG GD GRPG GLQG RG GR G G+PG G RG GADGK G+ G GLQGLPGP+G PG++G +G G+DG PG PG+ GPRGD G +G G GPPGP+G G RG PG G RGFQG+PGA G G GKDGEAG+ G G PG G G RGFPGERG IG PG G RGE G G DG G PGPKGN G G PGL+GLPG RG+PG G KG G+ GP+GP+GP G GERG QG GP G PGEP +GDPG PG GE GA G G+RG G QG QGFPGP G+ G PG+ G RG PG KGEQGNPG G GE G G G+ G KG RG+PG RGE G+MGPPG G G
Sbjct: 1008 EEISSTSARDHSVLPTEILPSESNIYSSVAIPGP---RGSPGRPGDDGRPGDSGFPGQPGTPGIPGPPGPPGPVPDVSLYYQQLALSQANEDKGPSGAASLYGPEALSYIQTQVGPMGPRGPPGPSGPPGPQGFQGTRGETGELGSPGPPGMPGPRGLPGLPGKDGISGEDGETGPSGSPGAMGQRGLPGIPGLPGLKGHRGFPGLDGVKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGREGPSGPPGLRGLDGIAGPPGQPGVIGKPGSPGFPGNPGVKGDQGLQGSTGNR-------ESGRPGQPGETGPQGPQGKDGIPGEKGATGAIGPVGMIGFPGARGQPGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDAGMPGPRGLPGSPGNEGKRGKRGMQGPIGSVGPPGERGVSGERGFPGSDGPIGPQGQPGDRGPPGAIGSKGATGDPGRPGPAGLQGARGLMGRPGATGKPGNPGERGIQGADGKPGEQGLPGLQGLPGPIGSPGERGYSGERGKDGEPGNPGSPGPRGDTGKEGPPGVAGPPGPSGSDGARGLPGPTGSRGFQGLPGAAGNPGVPGKDGEAGVQGHPGPPGMVGDRGERGFPGERGLIGPPGPMGPRGETGTQGSDGLIGLPGPKGNKGSFGSPGLLGLPGARGLPGEPGQKGERGTIGPIGPEGPSGHIGERGPQGEIGPPGSPGEPAERGDPGLPGLIGEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSHGEIGAPGPIGVTGVKGIRGDPGVRGEPGLMGPPGIIGHVG 1817 HSP 2 Score: 316.235 bits (809), Expect = 1.076e-84 Identity = 356/817 (43.57%), Postives = 427/817 (52.26%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTG--EKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGK---------MGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEP---GPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGL---------QGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGH------------NGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPK---GNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGL 1022
PG+ G G+ G G +G PG MG G PG+PG PG+ G RG PG+ G G QG G++G G GP GP G +GP G G G++G SG G G G GPPG+ G+ G PG PG G+ PG+ G +G GSTG E G G PG GP GP G G GE+G G GP G+ G G G PG PG+ G PG G PG+PG +G G G KG G+ GPRG G PG G+ GK +GPPG+ G +GE+G PGS G GPQG PG RG PG +G KG G GR GP G G +G +G+ PG TG G G RGI+G G PG G P G PG G PG G SG +G+ G+ G PG+ GP+ GDTG+ G PG+ G RG PG G RG G G G PG GK G+ G+QG PGP G GD+G G PG+ G G PG GPRG+ GT G +G G PGP G G G+PG G G +G+PG PG+ G +G GE G G+ G PG G+ RG PG G IG PGAPG GE G GL G G PGP+ G PG KG G GL G++G PG GS G G+ GP+G G +G +G+ G++G G +GPPG G G G PG G +GA G+ G +G G G G PGP G PG PG+ G +G GS G QG GS G G PG GL GLPGS G G G RG G +G PG+ G+
Sbjct: 1166 PGKDGISGEDGETGPSGSPGAMGQRGLPGIPGLPGLKGH-----------------------------------------RGFPGLDGVKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGREGPSGPPGLRGLDGIAGPPGQPGVIGKPGSPGFPGN---PGVKGDQGLQGSTGNRESGRPGQPGETGPQGPQGKDGIPGEKGATGAIGPVGMIGFPGARGQPGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDAGMPGPRGLPGSPGNEGKRGKRGMQGPIGSVGPPGERGVSGERGFPGSDGPIGPQGQPGDRGP------PGAIGSKGATGDPGRPGPAGLQGARGLMGR------PGATGKPGNPGERGIQGADGKPGEQGLPGLQGLPGPIGSPGERGYSGERGKDGEPGNPGSPGPR---GDTGKEGPPGVAGPPGPSGSDGARGLPGPTGSRGFQGLPGAAGNPGVPGKDGEA---GVQGHPGPPGMVGDRGERGFPGERGLIGPPGPMGPRGETGTQGSDGLIGLPGPKGNKGSFGSPGLLGLPGARGLPGEPGQKGERGTIGPIGPEGPSGHIGERGPQGEIGPPGSPGEPAERGDPGLPGLIGEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSHGEIGAPGPIGVTGVKGIRGDPGVRGEPGLMGPPGIIGHVGPSGPPGNIGPSGAPGLPGVKGDAGDTGRPGNPGPIGNPGLPGIDGIKGESGSPGSQGLTGSQGPQGPPGERGLPGLPGSPGPIGNRGLRGAPGEIGQPGKTGV 1920 HSP 3 Score: 277.33 bits (708), Expect = 3.239e-72 Identity = 343/770 (44.55%), Postives = 408/770 (52.99%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKG-PSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGP------------AGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGL---QGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGES---GMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKT---GQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGER---GTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPG 988
PG++G +GD G G+ G PG G PG+PG G G G GP ++ P ++ GE+G P D GP+GP+G PG +GPPG G +G GD G PGP G G RGL G PG G+ G GE G QG G PG++GLPG+ GLPGP G G +G G G+ GE G+PGS GP G G +G G RG GP+G G +G+ G G PG PG G+ G G PG PG GD G G G GL GP G G G G G +G PG G G GSPG G PG +G PG G G G+ GP+GP+G +G G GP+GE G GE + G GLPG G G G G RGP G G G PGP G G+PG G G G G++G PG G HG+ G PG G+ G++G G G RG+PG +GP G G G + G +GP G GLPG G GD G G PG GNPG PG G +G+ G+ G G G GP GP GER G PGSPGP G +G+ GAPG+ G GK G+ G G PG G G+ G GE G G G PG G G PG GPPG PG G G G G G G G+ G G KG +G QG GP GPRGK G GL+GI G G G+ GA+G G G G G+ G++G++G PG G+ G G PGI G+PG G PG G GNPGS G PGE G
Sbjct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core: 206.068 bits (523), Expect = 7.606e-50 Identity = 289/644 (44.88%), Postives = 326/644 (50.62%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVG---PRGSPGMQGPPGPQG---FQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGI---PGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGM---KGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPG------PPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGP------------RGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGH 857
PGEQG G G G G PGE G+ G G G PG PG PGP+ + G E P G G P GS G QG PG G G+ GEAG G PGPPG +G RG G PG+ G G G GP+G TG G GL G+PG G KG G PGL G G G GE G+ G G+IGP+GP GP+G GERG +G GPPG G G PG PG IG+PG PG PG G +G G GP+G GL G +GD G PG GE G G PG G G G G TG G +G PG RG PGL G PG +G G +G G GP G G+ KG+ G G G PGP G+ G G GI+G +G PG G G PPG RG+PG G GP G G RG PG G GK G G PG PGL G G+PG G G G+ G +G PG G G GP GL G PGP GP G G GP G+ G G G GPRG PG P G G G GE G G+ G RGF G+ G PG G GE G+PG GLPG+ G+ G RG PG G PG G G PG GPPG G +G+PG
Sbjct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
BLAST of collagen alpha-1 chain vs. nr
Match: gi|801397755|ref|XP_012059298.1| (PREDICTED: LOW QUALITY PROTEIN: fibril-forming collagen alpha chain-like [Atta cephalotes]) HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0 Identity = 492/821 (59.93%), Postives = 557/821 (67.84%), Query Frame = 0
Query: 215 EEPYEPPYEDPYAPPYEQPDSETPVMVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGE-KGPSPDPFS-------YMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRG---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 1024
EE D P E SE+ + G RG GR G+ GRPG+ GFPG PG PG PG PGPPGP P++ + QL S E KGPS S Y+Q QVGP+GPRG PG GPPGPQGFQG +GE G+ G PGP G GPRGL GLPGKDG SG+DGE GP G G G+RGLPG+PGLPG KGHRGFPGLDG KG G++GEKG GSPG +GPVGPMGPAGPRGERGREGPSGPPGLRG+DG+ G PG+PG IGKPG PGFPG PG KGD G+ G G+ GLQGPRG +SGRPG+PGE+G GP GKDG GEKG+ G+ G G GFPG RG PG G+PG G KG G G G KG++G+KG+ G GPRGLPG G+ G+RG+RG++GP G GP GE G G RG PG+DG GP+GQ GDRGPPGA G KG GD GRPG GLQG RG GR G G+PG G RG GADGK G+ G GLQGLPGP+G PG++G +G G+DG PG PG+ GPRGD G +G G GPPGP+G G RG PG G RGFQG+PGA G G GKDGEAG+ G G PG G G RGFPGERG IG PG G RGE G G DG G PG KG+ G G PGL+GLPG RG+PG G KG G+ GP+GP+GP G GERG QG GP G PGEP +GDPG PG GE GA G G+RG G QG QGFPGP G+ G PG+ G RG PG KGEQGNPG G GE G G G+ G+KG RG+PG RGE G+MGPPG G G
Sbjct: 118 EEISSTSTRDHSVLPTEILPSESNIYSSV-AIPGPRGSPGRPGDDGRPGDSGFPGQPGTPGIPGPPGPPGPVPDVSLYYQQLALSQANEDKGPSGAAASLYGPEASYIQTQVGPMGPRGPPGPSGPPGPQGFQGTRGETGELGSPGPSGMPGPRGLPGLPGKDGISGEDGETGPSGSPGAMGQRGLPGIPGLPGLKGHRGFPGLDGVKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGREGPSGPPGLRGLDGIAGPPGQPGVIGKPGSPGFPGNPGVKGDQGSQGSTGNQGLQGPRGXDSESGRPGQPGETGPQGPQGKDGIPGEKGATGAIGPVGMVGFPGARGQPGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDAGMPGPRGLPGSPGNEGKRGKRGMQGPIGSVGPPGERGVSGERGFPGSDGLIGPQGQPGDRGPPGAIGSKGATGDPGRPGPAGLQGARGLMGRPGATGKPGNPGERGIQGADGKPGEQGLPGLQGLPGPIGSPGERGYSGERGKDGEPGNPGSPGPRGDTGKEGPPGVAGPPGPSGSDGARGLPGPTGSRGFQGLPGAAGNPGVPGKDGEAGVQGHPGPPGMVGDRGERGFPGERGLIGPPGPIGPRGETGTQGSDGLIGLPGSKGDKGSFGSPGLLGLPGARGLPGEPGLKGERGTIGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDPGPPGLIGEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSHGEIGAPGPIGVTGAKGIRGDPGVRGEPGLMGPPGIIGHVG 937 HSP 2 Score: 306.605 bits (784), Expect = 4.773e-82 Identity = 355/815 (43.56%), Postives = 419/815 (51.41%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGK---------MGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGP---PGAAGPKGKHGDTGR---------PGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQ------------DGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPK---GNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGL 1022
PG+ G G+ G G +G PG MG G PG+PG PG+ G G F P D Q G G GSPG GP GP G G +GE G GP GPPG G G++G PG+ G G+ PG G PG PG+ G +G +G G G +G G E G G PG GP GP G G GE+G G GP G+ G G G PG PG+ G PG G PG+PG +G G G KG G+ GPRG G PG G+ GK +GPPG+ G +GE+G PGS G GPQG PG RG PG GS KG G GR GP G G +G +G+ PG TG G G RGI+G G P GE G PG +G+PG G G +G SG+RG PG G G GDTG+ PG G G RG PG G RG G G G PG GK G+ G+QG PGP G GD+G G PG+ G GT G+ G G PG+ G G G PG G G RG PG PG +G +G G G G +G GE G G+ G PG G+ RG PG G IG PGAPG GE G GL G G PGP+ G PG KG G GL G++G PG GS G G+ GP+G G +G +G+ G++G G +GPPG G G G PG G +GA G+ G +G G G G PGP G PG PG+ G +G GS G QG GS G G PG GL GLPGS G G G RG G +G PG+ G+
Sbjct: 276 PGKDGISGEDGETGPSGSPGAMGQRGLPGIPGLPGLKGHRG-------F-------------PGLDGVKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGREGPSGPPGLRGLDGIAGPPGQPGVIGK------------PGSPGFPGNPGVKGDQGSQGSTGNQGLQGPRGXDSESGRPGQPGETGPQGPQGKDGIPGEKGATGAIGPVGMVGFPGARGQPGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDAGMPGPRGLPGSPGNEGKRGKRGMQGPIGSVGPPGERGVSGERGFPGSDGLIGPQGQPGDRGPPGAIGS------KGATGDPGRPGPAGLQGARGLMGR------PGATGKPGNPGERGIQGADGKP---GEQGLPGLQGLPGPIGSPGERGYSGERGKDGEPGNPGSPGPRGDTGKEGPPGVAGPPGPSGSDGARGLPGPTGSRGFQGLPGAAGNPGVPGKDGEA---GVQGHPGPPGMVGDRGERGFPGERGLIGPPGPIGPRGETGTQGSDGLIGLPGSKGDKGSFGSPGLLGLPGARGLPGEPGLKGERGTIGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDPGPPGLIGEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSHGEIGAPGPIGVTGAKGIRGDPGVRGEPGLMGPPGIIGHVGPSGPPGNIGPSGAPGLPGVKGDAGDTGRPGNPGPIGNPGLPGIDGIKGESGSPGSQGLTGSQGPQGPPGERGLPGLPGSPGPIGNRGLRGAPGEIGQPGKTGV 1040 HSP 3 Score: 262.307 bits (669), Expect = 1.256e-67 Identity = 391/1089 (35.90%), Postives = 482/1089 (44.26%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPG------------PQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGE---PGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRP------------------------------GRPGESGKMGPPGKDGFNGEKGSPG---STGAPGPQGFPGPRGAPGL------NGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPG------PLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAP---GLRGEAGGPGLDGPPGGPGPKGN------------PGH------------------------KGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNMIIYDCFVTILGTCNCLYITRVNKD-GKVLKDPLESMESRAPQGAEDLLEEWDQVDPQACQEQKGPRVQWGLMVVQDRKVILDQLGHLETEVLQDCL--DQLDLLVVWVPGVLKVSVA----NRDLLERRVSMDPKDYLGPLAPLVSAEKEENKDQLANLVHQVLVDALETRDHLEQLDQWDPQEDLAYPDNLAKLEILDNLESV 1226
PG +G++G G G G G G G PG PG GP GPQ + GEKG + +GPVG G PG +G PG G G +G GD G G G GPRGL G PG +G+ G+ G GP G GPPG+RG+ G G PG G G G G +G G+ G KG +G PG GP G G G G G G G PG RGI G G PGE PG G PGP G PG G G+ G G G+PG GPRGD+G+ G PG +G G PGKDG G +G PG G G +GFPG RG G G G G G G G G KG G G LG G RGLPG G G RG G GP GP G P GE GPPG G P G GP G G+ G PG G +G HG G G PG QGL G PG G RG PG G +G PG G G++G G G+ G G GD G+ G PG G PG G+ GP G PG G +G PG PG G +G+ G PG+PGP G G+PG +G GE+G PG GL G QG +G PGERG G PG+P G RG G PG G PG G +G PGH KGPPG+ G G G PG +G G +G G G GP+G E G QG+ GP GP G+PG G G G GE G G G RG G+QG PG PG+ G G+ G GLPG GE G G+ G G PGP+G G PGS+G GE G +G G+ GPPG PG G +G + + ++ + E R E LL+ ++ + + Q+ P + R + L E D D D ++V+ + + +R ++ + +L + + + + +Q+ L H + + E Y L KL +++E +
Sbjct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core: 259.225 bits (661), Expect = 1.121e-66 Identity = 392/1083 (36.20%), Postives = 482/1083 (44.51%), Query Frame = 0
Query: 238 PVMVDAPGEQGN------RGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPP------------GPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGE---PGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKD---GEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQ---------GITGPV---------------------GPPGEPGAQGDPGSP------------------GPAGEAGATGM---MGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG--RNVNMIIYDCFVTILGTCNCLYITRVNKDGKVLKDPLESMESRAPQGAEDLLEEWDQVDPQACQEQKGPRVQWGLMVVQDRKVILDQLGHLETEVLQDCLDQLDLLVVWVPGVLKVSVANRDLLERRVSMDPKDYLGPLAPLVSAEKEE-------NKDQLANLVHQVLVDALETRDHLEQLDQWDPQEDLAYPDNLAKLEILDNLESVEIVASLAPRV 1236
P ++ PG G +GD G G TG G G G G PG PG GPQ Q + GEKG + +GPVG G PG +G P G G G +G GD G G G GPRGL G PG +G+ G+ G GP G GPPG+RG+ G G PG G G G G +G G+ G KG +G PG GP G G G G G G G PG RGI G G PGE PG G PGP G PG G G+ G G G+PG GPRGD+G+ G PG +G GP G D G +G PG TG+ G QG PG G PG+ G G G +G G G G +GE G GE G +GP G GP G G +G G+ G G G G G PG G+PGA G G G G+RG G GP+G G G G G G GSPG RG PG G GEPGA G G+ GP GLQ G G PG +GL G PG G+ G PG G +G+PG G +G G PGP G +G +G G PG RG G+ G PG GH G G G G GLPG +G G G PG G IG+PG PG+ G G G PG G G+ G +GPPG GLPG G PGP G++G G+ G +G G G +G G G TG + GPPG PGA G G P GP GE G G+ G RG PGP G++G G G G G G RG G +G G+PG +G G PG GL G G G RG PG G G GP G PG G G D L + +++ P + L +E ++ + E++ R + L ++ K+ +L + E DL + D L +DP + A LV + E+ N + + H + D ET L ++D A + + L++L + I V
Sbjct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core: 75.8702 bits (185), Expect = 6.325e-10 Identity = 67/138 (48.55%), Postives = 75/138 (54.35%), Query Frame = 0
Query: 897 QGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGE---------PGPRGESGMMGPPGRPGLAGR 1025
QG RG G G GP G PG +G PG PG G +G G G GSPG G +G PG PG+PG G G GL G KGEQG G G G PGP G G G G RGE PG RG G+ GPPG+PG+ G+
Sbjct: 249 QGTRGETGELGSPGPSGMPGPRGLPGLPGKDGISGEDGETGPSGSPGAMGQRGLPGIPGLPGLKGHRGFPGLDGVKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGREGPSGPPGLRGLDGIAGPPGQPGVIGK 386
BLAST of collagen alpha-1 chain vs. nr
Match: gi|1009414949|gb|KYN33786.1| (Collagen alpha-2(I) chain [Trachymyrmex septentrionalis]) HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0 Identity = 491/784 (62.63%), Postives = 554/784 (70.66%), Query Frame = 0
Query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
RG GR G+ GRPG+ G+PG PG PG PG PGPPGP P++ + QL S E KGPS P+ SY+QAQVGP+GPRG PG GPPGPQGFQG +GE G+ G PGPPG GPRGL GLPGKDG SG+DGE GP G GP G+RGLPG+PGLPG KGHRGFPGLDGAKG G++GEKG GSPG +GPVGPMGPAGPRGERGREGPSGPPGLRG+DG+ G PG+PG IGKPG PGFPG PG KGD G GP G+ GLQGPRG+SGRPG+PGE+G GP GKDG GEKG+ G+ G G GFPG RG PG G+PG G KG G G G KG++G+KG+ G GPRGLPGP G+ G+RG+RG+RGP G GP GE G G RG PG+DGP GP+GQ GDRGP GA G KG GD GRPG+ GLQG RG GR G G+PG G RG GADGK G+ G GLQGLPGPMG PG++G +G G+DG PG PG GPRGD G +G G GPPGP+G G RG PG G RGFQG+PGA G G GKDGEAG+ G G PG G G RG PGERG IG PG G RGE G G DG G PG KG+ G G PGL+GLPG RG+ G G KG G+ GP+GP+GP G GERG QG GP G PGEP +GDPG PG GE GA G G+RG G QG+QGFPGP G+ G PG+ G RG PG KGEQGNPG G PGE G G G+ G+KG RG+PG RGE G+MGPPG G G
Sbjct: 1253 RGSPGRPGDDGRPGDSGYPGQPGTPGIPGPPGPPGPVPDVSLYYQQLALSQANEDKGPSGAAASLYGPEALSYIQAQVGPIGPRGPPGPSGPPGPQGFQGIRGETGELGSPGPPGMPGPRGLPGLPGKDGISGEDGETGPLGSPGPVGQRGLPGIPGLPGLKGHRGFPGLDGAKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGREGPSGPPGLRGLDGIAGPPGQPGVIGKPGSPGFPGNPGVKGDQGPQGPTGNQGLQGPRGESGRPGQPGETGPQGPQGKDGIPGEKGATGAIGPVGMVGFPGARGQPGTPGNPGTPGAKGAPGLPGDRGLKGDTGVKGDSGMPGPRGLPGPPGNEGKRGKRGMRGPIGSVGPPGERGVSGERGFPGSDGPIGPQGQPGDRGPLGAVGSKGATGDPGRPGAAGLQGARGLMGRPGASGKPGNPGERGIQGADGKPGEQGLPGLQGLPGPMGTPGERGYSGERGKDGEPGNPGPPGPRGDTGKEGPPGVQGPPGPSGSDGVRGLPGPTGSRGFQGLPGAAGNPGVPGKDGEAGVQGHPGPPGMVGDRGERGLPGERGLIGPPGPMGPRGETGTQGSDGLIGLPGLKGDKGSFGSPGLLGLPGARGLSGEPGQKGERGTIGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDPGPPGLIGEPGAPGNPGERGPHGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSPGEIGAPGPIGVTGAKGIRGDPGVRGEPGLMGPPGIIGHVG 2036 HSP 2 Score: 298.516 bits (763), Expect = 6.222e-79 Identity = 380/918 (41.39%), Postives = 436/918 (47.49%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGP--SPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAG------------------------DHGPPGPPGSLG---PRGLSGLPG------------KDG---ESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGP---SGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGP---------KGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPK---------------GKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGP---PGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGIT---GPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGF---------------------------------------PGPPGIPGSP------------------GMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGS---KGARGEPGPRGESGMMGPPGRPGLAG 1024
PG+ G G+ G G G PG +G G PG+PG PG+ G G P L+ + +Q GEKG SP P + +GP GPRG G +GP GP G +G G AG D GP GP G+ G PRG SG PG KDG E G G GP G G PG RG PG PG PG G +G PGL G +G G TG KG+SG PG G GP G G RG+RG GP GPPG RG+ G G PG G IG G PG G G+ G GA G G PG G +G G GRPG SGK G PG+ G G G PG G PG QG PGP G PG G G G G G +G++GP G G G G G RGLPGPTGS RG G PG G PG PG G G G GP G GDRG G G + G G G G PGL+G +GS G G G PG G GEPG G+ G +GP GP GP G G GP G+ G PG+PG RGDPG GL G PG PG GP G +G G PGP+G G+PG G G+ G GE G PG G PGE G G G G +G G PG G G G PG+ G G GP GN G G PGL G+ G G G G+ G +G+ G G DG +G+ G G QG+T GP GPPGE G G PGSPGP G G G G+ G PG G +G GPPG+PG+ G+ G RG G G QG G G G+PGP+GL G+ G +G +G G RG +G+ G PG PGL G
Sbjct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core: 263.462 bits (672), Expect = 8.644e-68 Identity = 357/891 (40.07%), Postives = 409/891 (45.90%), Query Frame = 0
Query: 248 GNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGM---------QGPPGPQGFQGQQGEAGDHGPPGPPGSLGP------RGLSGLPGKDGES------------------GQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGE---PGSIGKPGPPGFPGIPGSKGDMGAG---------------------------------------GPKGSPGLQGPRGDSGRPGRPGESGKMG------PPGKDGFNGEKGSPGSTGA------------PGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAP---GLRGEAGGPGLDGPPGGPGPKGN------------PGH------------------------KGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPG 1006
G RG G G G+PG +G PG+PG PG PG+ G GPQ P NQ Q GE G P + GP GP+G G+ GP G GF G +G+ G G PG PG+ G RGL G G G+S G+ G GP G GPPG+RG+ G G PG G G G G +G +G+ G KG +G PG G G G G G G G G PG RGI G G PGE PG G PGP G PG G G+ G GP GS G QG G +G PG PG+ G+ G PPG G GE+G PG G G QG G G PGL G G G G G G G GE G KGE G +GP G GP+G G RG P GE GPPG G P G GP G G+ G PG G +G HG G G PG QGL G PG G RG PG G +G PG G G++G G G+ G G GD G+ G PG G PG G+ GP G PG G +G PG PG G +G+ G PG+PGP G G+PG +G GE+G PG GL G QG +G PGERG G PG+P G RG G PG G PG G +G PGH KGPP G+PG G GP G G G GP G G RG +GE G QG+ GP GP G+PG G G G GE G G G RG G+QG PG PG+ G G+ G GLPG GE G G+ G G PGP G G PGS+G GE G
Sbjct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core: 229.18 bits (583), Expect = 5.369e-57 Identity = 313/812 (38.55%), Postives = 367/812 (45.20%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPG---------------------PQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGP---------RGSPGMQGPPGPQG---------FQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKG---HRGFPG------------------------------------LDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSI------------GKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGS------------------------PGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGD---------PGTDGL---------------------NGPPGPPGPT------------------GPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDG 892
PGE+G G G +G G PG G PGTPG PGTPG G PG P+ P N+ ++ G +GP +G VGP RG PG GP GPQG G +G GD G PG G G RGL G PG G+ G GE G QG G PG++GLPG+ GLPGP G RG+ G DG +G G TG +G G PG+ G P G G GE G +G GPPG+ G G G PGE G I G G G G+PG KGD G+ G G GL G RG SG PG+ GE G +GP G +G +G G PG G PG G PG RG GL G G GP+G G G G +G G+KGE G G G PG G+ G G G +G G PG GEPG G G+ G GPSGP G G G PG G KG GDTGRPG+PG G G PG G +G+ G G +G G+ G G G +GL GLPG GP G++GL G PG+ G PG G GP G PG G GPPG PG G +GERG G GP+G +G P P GK G AGL G G GE+G++G++G G G G PG+PGL GE G PGL PG PG G PG +G PG+ G PGP G G+ GS+GP G +G
Sbjct: 1542 IPGEKGATGAIGPVGMVGFPGARGQPGTPGNPGTPGAKGAPGLPGDRGLKGDTGVKGDSGMPGPRGLPGPPGNEGKRGKRGMRGP-----------IGSVGPPGERGVSGERGFPGSDGPIGPQGQPGDRGPLGAVGSKGATGDPGRPGAAGLQGARGLMGRPGASGKPGNPGERGIQGADGKPGEQGLPGLQGLPGPMGTPGERGYSGERGKDGEPGNPGPPGPRGDTGKEGPPGVQGPPGPSGSDGVRGLPGPTGSRGFQGLPGAAG--NP-GVPGKDGEAGVQGHPGPPGMVGDRGERGLPGERGLIGPPGPMGPRGETGTQGSDGLIGLPGLKGDKGSFGSPGLLGLPGARGLSGEPGQKGERGTIGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDPGPPGLIGEPGAPGNPGERGPHGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSPGEIGAPGPIGVTGAKGIRGDPGVRGEPGLMGPPGIIGHVGPSGPPGNIGSSGAPGLPGVKGDAGDTGRPGNPGPTGNPGLPGIDGIKGESGSPGSQGLTGSQGPQGPPGERGLSGLPGSPGPIGNRGLRGAPGEIGQPGKTGTEGPPGPPGLIGSPGAPGHTGEIGPEGPTGKPGPPGIGGRPGDKGPPGVPGAAGPSGPPGLSGPPGPIGPTGLTGERGPKGETGPQGVEG-PQGP-----RGKPGPAGLEGIKGDHGEEGQKGAKGHRGFTGLQGLPGSPGLVGEKGIPGL---PGLPGKDGEPGIRGN------PGREGNPGPIGPVGNPGSRGPPGEEG 2324 HSP 5 Score: 221.861 bits (564), Expect = 1.063e-54 Identity = 287/666 (43.09%), Postives = 336/666 (50.45%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPV----GPRGSPGMQGPPGPQG---FQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQG---PRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGP---RGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPG---------ADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDG------------------NPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSG---------ERGTPGSPGPRGF---QGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGH 857
PGE+G +G G+ GE G PG G PG G PG G G G + G++GP + V GP GS G QG PG G G+ GEAG G PGPPG +G RG GLPG+ G G G GP+G TG G GL G+PGL G KG G PGL G G G +GE G+ G G+IGP+GP GP+G GERG +G GPPG +PGEP G PGPPG G PG+ G+ G GP G GLQG P+G G PG G+ G G G+ G G GSPG GAPGP G G RG PG+ G PG +GP G G G GP G +G G GLPG G AG GR G PGP G PG PG G+ G G G +G +G +GP G G +G G G PG G +GLRG+PG IG QPGK G G PG A G TG++GP+G G PGP G G G GPPG G G G GP+G+ G G+ GP GP G GP+G E G G+ G RGF QG+PG+PG G E G+PG GLPG+ G+ G RG PG G PG G G PG GPPG G +G+PG
Sbjct: 1702 PGERGIQGADGKPGEQGLPGLQGLPGPMGTPGERGYSGERGKDGEPGNPGPPGPRGDTGKEGPPGVQGPPGPSGSDGVRGLPGPTGSRGFQGLPGAAGNPGVPGKDGEAGVQGHPGPPGMVGDRGERGLPGERGLIGPPGPMGPRGETGTQGSDGLIGLPGLKGDKGSFGSPGLLGLPGARGLSGEPGQKGERGTIGPIGPEGPSGHIGERGPQGEVGPPG---------SPGEPAERGDPGPPGLIGEPGAPGNPGERGPHGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSPGEIGAPGPIGVTGAKGIRGDPGVRGEPGLMGPPGIIGHVGPSGPPGN------IGSSGAPGLPGVKGDAGDTGR------PGNPGPTGNPGLPGIDGIKGESGSPGSQGLTGSQGPQGPPGERGLSGLPGSPGPIGNRGLRGAPGEIG---QPGKTGTEGPPGPPGLIGSPGAPGHTGEIGPEGPTGKPGPPGIGGRPGDKGPPGVPGAAGPSGPPGLSGPPGPIGPTGLTGERGPKGETGPQGVEGPQGPRGKPGPAGLEGIKGDHGEEGQKGAKGHRGFTGLQGLPGSPGLVG------EKGIPGLPGLPGKDGEPGIRGNPGREGN------PGPIGPVGNPGSRGPPGEEGRQGSPGL 2331 HSP 6 Score: 68.5514 bits (166), Expect = 9.515e-8 Identity = 56/114 (49.12%), Postives = 65/114 (57.02%), Query Frame = 0
Query: 921 PGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGE---------PGPRGESGMMGPPGRPGLAGR 1025
PG G +GE G TG +G SPGP G +G PG PG+PG G G GL G+KGEQG G G G PGP G G G G RGE PG RG G+ GPPG+PG+ G+
Sbjct: 1378 PGKDGISGEDGETGPLG---SPGPVGQRGLPGIPGLPGLKGHRGFPGLDGAKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGREGPSGPPGLRGLDGIAGPPGQPGVIGK 1488
BLAST of collagen alpha-1 chain vs. nr
Match: gi|1325279559|ref|XP_023324432.1| (collagen alpha-1(I) chain-like isoform X1 [Eurytemora affinis] >gi|1325279561|ref|XP_023324433.1| collagen alpha-1(I) chain-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 593.193 bits (1528), Expect = 0.000e+0 Identity = 625/979 (63.84%), Postives = 682/979 (69.66%), Query Frame = 0
Query: 49 GLVALVLLASQGVGAKPEALPEAKPNPEAKPQDPNEEYSYQDYGEYGN-FGQDYYGE-----YGE--ESANGNPPP-----EYDTNINGVDPCAEVECQPVECPVETYTPMGECCPVCPQGFSEPEETVRPSFPSPPPYEPPYEPPFEPPYEEPYVPPYEEPYVPPYEDPYTPPYAPPYEEPYEPPYEDPYAPPYEQPDSETPVMVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMM 1014
G L+L+ G A P KP P AKPQDPNE Y Y YG+Y GQ YY E YGE E P P E D +I+ D CAEV+C P + CPV +PYVP E P P E P E VDA G G+ GD GR G+ G G G PG G PG PGMPGPPGPQP+++PF+NQ+QQS G EKGPSPDPF+YMQAQVGPVGPRGSPGM+GP GPQGF G QGE GD GP GPPGS+G RGL+GLPGK+GE G+DGE G GP GPPG+RGLPGMPG+PGPKGHRGFPGLDGAKG +G G KGE G+ G +GP GP+GP+GPRGERGR+GP GPPGLRGIDG G PGEPG +GKPGPPGFPG PG+KGDMGA G KGS GLQGPRG+SG+PG GE GKMGPPGKDG NGEKG PG+ GAPGP GFPGPRG GLNGSPGP GPKG G+ G G KGE G+KGE+G GPRGLPGPTG+AG RG RGIRGPAGP GP+GEPG PGGRGMPG DGP+GPKGQ+GD+G G G KGK GD GRPG PGLQGLRG PGR GPRG G G GEPG DGK G+ GPQGLQGLPGPMG PGDKG G G GNPG G GPRGDPG DGL G GPPGP+GP+GERG GSPGPRGFQGMPG PGK G +GKDGE G+ G G+ G +GK GSRGFPGERG++G PG PGLRG GGPGLDGPPG GPKG PGHKGPPGLVGLPGQRG+PGP G KG G+ G GP+G GKQGERG QGI+GP GPPGE G+ GDPG GPAGE GA G MG RG PGPQGMQGFPGPPGIPG PG+ G RGL G KG QGNPG GGPGEPGP GLTGL G KGARGE GPRGESGMM
Sbjct: 3 GWQTLLLVVWLGALGSVLADPAPKPRPRAKPQDPNENYDYS-YGDYSEGEGQGYYDENNNNDYGEPSEPEGYGPAPSTGRVEVDYSIDDSDGCAEVDC-----------PNVQECPV-------------------------------------------QPYVPLGE---CCPICPVPMETVRPRTE-----------------VDAQGSIGSEGDRGREGDEGPRGRPGSPGISGTPGIPGMPGPPGPQPDIQPFLNQIQQSQGSEKGPSPDPFTYMQAQVGPVGPRGSPGMRGPAGPQGFTGPQGEPGDAGPSGPPGSIGERGLTGLPGKEGEPGRDGEPGASGPPGPPGRRGLPGMPGIPGPKGHRGFPGLDGAKGELGGPGSKGEEGASGPMGPGGPIGPSGPRGERGRDGPPGPPGLRGIDGAMGPPGEPGGVGKPGPPGFPGTPGAKGDMGAPGDKGSIGLQGPRGESGKPGMSGEPGKMGPPGKDGSNGEKGGPGAPGAPGPPGFPGPRGQSGLNGSPGPHGPKGLNGEPGMVGMKGEGGLKGEMGAQGPRGLPGPTGAAGNRGPRGIRGPAGPQGPIGEPGAPGGRGMPGPDGPAGPKGQNGDQGLMGPQGDKGKPGDMGRPGPPGLQGLRGPPGRSGPRGAGGPTGKTGEPGQDGKNGEPGPQGLQGLPGPMGSPGDKGPMGEQGHQGNPGVTGQQGPRGDPGKDGLPGMNGPPGPSGPAGERGASGSPGPRGFQGMPGPPGKDGMSGKDGETGIQGPPGMMGNEGKRGSRGFPGERGSLGPPGPPGLRGLDGGPGLDGPPGPTGPKGTPGHKGPPGLVGLPGQRGIPGPEGPKGGRGNPGLPGPEGSVGKQGERGPQGISGPPGPPGEAGSPGDPGQAGPAGETGAAGAMGSRGPPGPQGMQGFPGPPGIPGMPGIKGDRGLTGDKGSQGNPGPAGGPGEPGPPGLTGLMGPKGARGEAGPRGESGMM 906 HSP 2 Score: 169.088 bits (427), Expect = 1.388e-38 Identity = 385/1099 (35.03%), Postives = 483/1099 (43.95%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGP---PGKDGFNGEKGSP---------GSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGS------------AGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGP---------PGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQ---------------GERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGM---------MGDRGSPGP---QGMQGFPGPPGIPGSPGMMGGR------------GLPGSKGEQGNPGSVG---------------------------GPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNMIIYDCFVTILGTCNCLYITRVNKDGKVLKDPLESMESRAPQGAEDLLEEWDQVDPQACQEQKGPRVQWG---------LMVVQDRKVILDQLGHLETEVLQDCLDQLDLLVVWVPGVLKVSVANRDLLERRVSMDPKDYLGPLAPLVSAEKEENKDQLANLVHQVLVDALETR-DHLEQLDQWDPQEDLAYPDNLAKLEIL--DNLESVEIVA 1230
APG++G+ G G GE+G+PG G PG G PG G G G G+ G + P + GP G G PGM G G G +G+ G G G PGP G+ G RG G+ GP GP GP G+ G PG G+PGP G G G +G +G +G G+KG+ PG +G GP G G RG GR SGP G G G TG PG+ G G+PGP G G+P GP GSPG +GP G+ G G PG +G+ GP PGKDG G G P G++G+PGP+GF G PGP G G +G+ G G +G GM G G+ G RG PG GS G G G GP GP G G GPPG G+PG G GP+G G RG PG GP+G G G G G+ G G PG G G PG+ GP GE GA G G GP G QG+ G GP GD+GLTG G GNPG G G G PG GL GP G G GP GE G G PG PG+ G G+ G G PG +GLPG +G +G RG PG RG G+ G PGL G G G DGPPG GP G+ GPPG G PG G GP G++G G+QG G G GK+ G+RG +G GP G G PG G PG GP G AG G +G G PGP +G +G GP GI G PGM+G G+ G KG +G+ G +G PG GP G+ G GS G G PGPRG G G G PG G + + N G DPL + E G E E+ + +A ++ K ++ +D + E + + D D ++V+ D+ + + PK + S EKE ++ + A + L+ L QE + + N E + +N +S+ ++
Sbjct: 386 APGDKGSIGLQGPRGESGKPGMSGEPGKMGPPGKDGSNGEKGGPGAPGAPGPPGFPGPRGQSGLNGSPGPH-----GPKGLNGEPGMVGMKGEGGLKGEMGAQGPRGLPGPTGAAGNRGPRGIR------------GPAGPQGPIGEPGAPGGRGMPGPDGPAGPKGQNGDQGLMGPQGDKGK---PGDMGRPGPPGLQGLRGPPGR---SGPRGAGGPTGKTGEPGQDGKNGEPGPQGLQGLP---------GPMGSPGDKGPMGEQGHQGNPGVTGQQGPRGDPGKDGLPGMNGPPGPSGPAGERGASGSPGPRGF---------QGMPGPPGKDGMSGKDGETGIQGPPGMMGNEGKRGSRGFPGERGSLGPPGPPGLRGLDGGPGLDGPPGPTGPKGTPGHKGPPGLVGLPGQRGIPGPEGPKGGRGNPGLPGPEGSVGKQGERGPQGISGPPGPPGEAGSPGDPGQAGPAGETGAAGAMGSRGPPGPQGMQGFPGPPGIPGMPGIKGDRGLTGDKGSQGNPGPAGGPGEPGPPGLTGLMGPKGARGEAGPRGE---------SGMMGPPGRPGEPGMPGEAGRQGAPGPSGLPGIKGSDGLRGPPGNRGPPGAQGMPGLEGPKGSTGADGPPGPQGPVGS---NGPPGDRGSPGLPGPTGPVGARGQQGAQGERGDSGLPGKEGPTGPPGLQGPPGPMGQRGERGEEGPPGSQGTPGLGGRPGDKGPPGSAGQMGPPGAPGLPGNVGKTGPPGPTGERGERGETGPQGIVGQPGMIGKPGPPGLQGPPGELGMSGEKGSKGHRGLIGLQGLPGPIGPPGEKGPPGNPGNNGEPGTPGSRGPPGIDGAVGSPGLLGAPGPRGPQGEEGKRGPPGELGPPGPPGPPGESSGYDAAALSALLGQGNSKG---PDPLSADEPMRNFGPELSDEDKKSLVLRAYKKLKASFEEFSNPDGGKNSPAKTCKDLHASYPEKKSGEYWIDPNGADTKDAILVFC-----------DMEKDATCVQPKPVFSQEFNIESEEKEIWIGEVPESPFDINYKADSNQMSFLQLLSAKAEQEIIYHCFNSFAFENIRGNNRKSLAFMS 1417 HSP 3 Score: 155.606 bits (392), Expect = 2.141e-34 Identity = 330/861 (38.33%), Postives = 383/861 (44.48%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQV----GPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGP---PGKDGFNGEKGSP---------GSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGP---------------------AGPPGPLGEPG---------PPGGRGMPGADGPSGPKGQSGDR------------------------GPPGAAGPKGKHGDTGRPGSPGLQ------------------GLRGSPGR---------------------IGPRGQPGKIGPRGEPGA------DGKTGQVGPQGLQGLPGPMGPPGDKGLTG------PPGQDGNPGTPGNAGPRGDPGTD---------------GLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGP---------GLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGP---------VGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQG 949
A G+ G GD G +G G GE G PGM G PG GPPG + + GEKG P + G G GSPG GP G G G G G+ G G G+ GPRGL G G G G G GP GP GP G+ G PG G+PGP G G G +G +G +G G+KG+ PG +G GP G G RG GR SGP G G G TG PG+ G G+PGP G G+PG P GSPG +GP G+ G G PG +G+ GP PGKDG G G P G++G+PGP+GF G PGP G G +G+ G G +G GM G G+ G RG PG GS G G G+RG GPPG +G PG P GGRG PG GP G G+ G+R GP G G G G G PG G+Q GL G G +GP+G G+ GPRGE G G+ G G G QG PGP G PG KG G G G G PG GP+G G D G G PG PGPTGP G RG G+ G RG G+PG G G G G G GQ G GE+G GS+G PG G G G PG G+ G P G GPPG G +G G GP G+VG PG G PGP G +G G G G G +G +G GLQG+ GP G PG G G PGS GP G GA G G G+PGP+G QG
Sbjct: 380 AKGDMGAPGDKGSIGLQGPRGESG---KPGMSGEPGKMGPPG------------KDGSNGEKGGPGAPGAPGPPGFPGPRGQSGLNGSPGPHGPKGLNGEPGMVGMKGEGGLKGEMGAQGPRGLPGPTGAAGNRGPRGIRGPAGPQGPIGEPGAPGGRGMPGPDGPAGPKGQNGDQGLMGPQGDKGK---PGDMGRPGPPGLQGLRGPPGR---SGPRGAGGPTGKTGEPGQDGKNGEPGPQGLQGLPG---------PMGSPGDKGPMGEQGHQGNPGVTGQQGPRGDPGKDGLPGMNGPPGPSGPAGERGASGSPGPRGF---------QGMPGPPGKDGMSGKDGETGIQGPPGMMGNEGKRGSRGFPGERGSLGPPGPPGLRGLDGGPGLDGPPGPTGPKGTPGHKGPPGLVGLPGQRGIPGPEGPKGGRGNPGLPGPEGSVGKQGERGPQGISGPPGPPGEAGSPGDPGQAGPAGETGAAGAMGSRGPPGPQGMQGFPGPPGIPGMPGIKGDRGLTGDKGSQGNPGPAGGPGEPGPPGLTGLMGPKGARGEAGPRGESGMMGPPGRPGEPGMPGEAGRQGAPGPSGLPGIKGSDGLRGPPGNRGPPGAQGMPGLEGPKGSTGADGPPGPQGPVGSNGPPGDRGSPGLPGPTGPVGARGQQGAQGERGDSGLPGKEGPTGPPGLQGPPGPMGQRGERGEEGPPGSQGTPGLGGRPGDKGPPGSAGQMGPPGAPGLPGNVGKTGPPGPTGERGERGETGPQGIVGQPGMIGKPGPPGLQGPPGELGMSGEKGSKGHRGLIGLQGLPGPIGPPGEKGPPGNPGNNGEPGTPGSRGPPGIDGAVGSPGLLGAPGPRGPQG 1201 HSP 4 Score: 132.88 bits (333), Expect = 2.297e-27 Identity = 178/419 (42.48%), Postives = 205/419 (48.93%), Query Frame = 0
Query: 657 KGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQV---------------GPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPG---IPGSPGMMGGRGLPGSKGEQGNPGSVGGPGE------------------------------------PGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPG 1021
KG G G GS GLQG RG G+ G G+PGK+GP G+ G++G+ G G GL G PGP GP KGL G PG G G G +G+ G G G PGP G G G RG G GP+G G PGAPG G G DG AG GQ G G G +G +G PG+ +G PG PGL+G L GPPG GP+G G G G G G+ G PGP G +G G G G GP G+QG +G G+TG GP G+PG G PG GP G +G G G GSPGP+G QG PGPPG + G G G +G PG G +G GS G PGE GP GL GLPG RG PGP G G G PG PG
Sbjct: 381 KGDMGAPGDKGSIGLQGPRGESGKPGMSGEPGKMGPPGKDGSNGEKGGPGAPGAPGPPGFPGPRGQSGLNGSPGPHGP---KGLNGEPGM---VGMKGEGGLKGEMGAQGPRGLPGPTGAAGNRGPRGIRGPAGPQGPIGEPGAPGGRGMPGPDGPAGPKGQNGDQGLMGPQGDKGKPGD---MGRPGPPGLQG------LRGPPGRSGPRGAGGPTGKTGEPGQDGKNGEPGPQGLQGLPGPMGSPGDKGPMGEQGHQGNPGVTGQQGPRGDPGKDGLPGMNGPPGPSGPAGERGASGSPGPRGFQGMPGPPGKDGMSGKDGETGIQGPPGMMGNEGKRGSRGFPGERGSLGPPGPPGLRGLDGGPGLDGPPGPTGPKGTPGHKGPPGLVGLPGQ---RGIPGPEGPKGGRGNPGLPG 781 HSP 5 Score: 120.168 bits (300), Expect = 1.510e-23 Identity = 147/330 (44.55%), Postives = 174/330 (52.73%), Query Frame = 0
Query: 715 GPMGPPGDKG---LTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSP---------GPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGR------GLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRN 1026
G MG PGDKG L GP G+ G PG G G G PG DG NG G G PG+P G G G PG G G NG+ G G+ G+ GL GE G +G RG PG GA G+ G G+RG AG G G PG PG +G PG GP G G G +G+ GP G KG G G GP GLQG+ GP PG G G+ GP G+ G G G G PGPQG+QG PGP G PG G MG + G+ G +G +G+PG G PG GP G +G G +GA G PGPRG GM GPPG+ G++G++
Sbjct: 382 GDMGAPGDKGSIGLQGPRGESGKPGMSGEPGKMGPPGKDGSNGE---------KGGPGAPGAPGPPGFPGPRGQSGLNGSPGPHGPKGLNGEPGMVGMKGEGGLKGEMGAQGPRGLPGPTGAAGNRGPRGIRGPAGPQGPIGEPGAPGGRGMPGPDGPAGPKGQNGDQGLMGPQGDKGKPGDMGRPGPP---------GLQGLRGP------PGRSGPRGAGGPTGKTGEPGQDGKNGEPGPQGLQGLPGPMGSPGDKGPMGEQGHQGNPGVTGQQGPRGDPGKDGLPGMNGPPGPSGPAGERGASGSPGPRGFQGMPGPPGKDGMSGKD 687 HSP 6 Score: 115.161 bits (287), Expect = 5.608e-22 Identity = 127/260 (48.85%), Postives = 141/260 (54.23%), Query Frame = 0
Query: 777 RGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPP---GEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSK---------GEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
+G G PG G G G GE+G PG +G PG+ G G G GE+G G+PGAPG G G G G G PGP G P GL G PG GM G G KG G+QGP G GP G G RG +GI GP GP GEPGA G G PGP G AG G GD+G GPQG +G PG G PG PG+ G RG PG G+ G PG G GEPGP GL GLPG G+ G+ GP GE G G PG G G
Sbjct: 381 KGDMGAPGDKGSIGLQGPRGESGKPGMSGEPGKMGPPGKDGSNGEKGGPGAPGAPGPPGFPGPRGQSGLNGSPGPHG------PKGLNGEPGMVGMKGEGGLKGEMGAQGPRGLPGPTGAAGNRGPRGIRGPAGPQGPIGEPGAPGGRGMPGPDGPAGPKGQNGDQGLMGPQGDKGKPGDMGRPGPPGLQGLRGPPGRSGPRGAGGPTGKTGEPGQDGKNGEPGPQGLQGLPGPMGSPGDKGPMGEQGHQGNPGVTGQQG 634
BLAST of collagen alpha-1 chain vs. nr
Match: gi|907618706|ref|XP_013119386.1| (PREDICTED: collagen alpha-1(I) chain-like [Stomoxys calcitrans]) HSP 1 Score: 584.334 bits (1505), Expect = 0.000e+0 Identity = 490/826 (59.32%), Postives = 551/826 (66.71%), Query Frame = 0
Query: 203 EDPYTPPYAPPYEEPYEPPYEDPYAPPYEQPDSETPV-MVDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQ-QSAGGEKGPSPDPFS--YMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
D TP PP +P E P S TP + G RGD G G G GE G PGTPG PG PG PGPPGP P++ + QL + A +KGP+ PF G GPRG PG GP GPQGFQG +GE G+ G GP G++GPRGL G PGKDG G+DGE GP G G PG RG+PG+PG PG KGHRG PG+DG+KG G+ GEKG +G G +GPVGP GPAGPRGERGREG G G RG+DG GAPG+PGS+GKPGPPGF GIPG+KGDMG GPKG GLQGPRG++GRPG PGE+G GP GKDG G+KGS G+ G GPQGFPGPRG GL GS G G KG GQ G G KG+ G+KGE GQ GPRGLPG G G+RG+RG+RGP GP GP GE G PG G+PG DGP GPKG GDRG G G KG +GD G PG PGLQGLRG PGR+GP G+ G G RG PGADGK G+ GPQGLQGLPGPMG PGDKG+ G PG+ G PG G GPRGD G DGL G GPPGP G G+RG G GPRGFQG+PGA G G GKDG G PG G G G G RG+PGERG +G PG PG RGE G PG DGPPG G +G GH G PG++GLPGQ+G+PGP+G KG GS GP+GP+G G+ G+RG QG GP G PGEPG +G G+PG GE G+ G+ G+RG GP G GFPG PGI G PG G RGL G KG QGN G G PGE G G GL G KGARGE G RGE G+ G PGRPG G
Sbjct: 156 SDDCTPELGPPIN--VQPADERPSTTERAAVQSATPTAYIPYESAVGPRGDRGYPGAQGPAGESGMPGTPGNPGVPGSPGPPGPVPDMSYYHQQLAAEYASSDKGPNAAPFVAPTFIPPAGQPGPRGPPGNVGPQGPQGFQGTRGEPGEAGLQGPTGAMGPRGLPGPPGKDGMPGEDGEAGPAGNAGSPGPRGMPGLPGQPGLKGHRGLPGVDGSKGDAGAPGEKGSAGVMGPVGPVGPTGPAGPRGERGREGAPGQAGARGLDGNPGAPGQPGSVGKPGPPGFTGIPGAKGDMGYMGPKGDQGLQGPRGEAGRPGAPGENGMPGPAGKDGSPGDKGSMGAPGIAGPQGFPGPRGPDGLPGSQGEPGIKGAPGQPGERGYKGDQGIKGEAGQPGPRGLPGTVGPEGKRGKRGMRGPTGPAGPTGERGSPGLPGLPGPDGPVGPKGNPGDRGIQGPPGVKGSNGDIGPPGLPGLQGLRGLPGRVGPDGRDGPPGERGIPGADGKPGEQGPQGLQGLPGPMGIPGDKGIPGEPGKAGEPGAAGPPGPRGDNGKDGLPGAQGPPGPQGQDGQRGEAGPTGPRGFQGLPGALGSPGAPGKDGAHGPPGPQGQIGPVGLRGERGYPGERGPVGQPGTPGERGEPGNPGHDGPPGLTGKQGEKGHMGAPGMMGLPGQKGLPGPSGIKGDRGSTGPIGPEGSPGRPGDRGPQGNVGPPGAPGEPGERGSNGNPGTPGEQGSAGVPGERGPIGPAGPPGFPGAPGIAGLPGAKGDRGLMGIKGSQGNTGPQGQPGEQGQPGPIGLTGPKGARGETGLRGEPGISGLPGRPGEMG 979 HSP 2 Score: 309.301 bits (791), Expect = 7.838e-83 Identity = 400/1093 (36.60%), Postives = 495/1093 (45.29%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGP---------SGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGP------RGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRG---------------EPGADGKTGQVGPQGLQGLPGPM---------------------GPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGT------PGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGP---------------------GLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSP------------------GPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNMIIYDCFVTILGTCNCLYITRVNKDGKVLKDPLESMESRAPQGAEDLLEEWDQVDPQACQEQKGPRVQWGLMVVQDRKVILDQLGHLETEVLQDCLDQLDLLVVWVPGVLKVSVANRDLLERRVSMDPKDYLGPLAPLVSAEKEENKDQLANLVHQVLVDALETRDHLEQLDQWDPQEDLAY---PDNLAKLEILDNLESVEIVASLAPRV 1236
APG+ G RG G G G+PG +G PG PG G PG G G + P +Q Q GE G P GP G GSPG +G G G G QG G GP G PGS G G+ G PG+ GE G G+ G +G G PG RGLPG G P+G RG G+ G G G TGE+G G PG GP GP+GP G G+RG +GP GPPGL G+ G+ G PG G G+ GPPG GIPG+ G G GP+G GL GP +G G PG+ GE G GPPG G NG+ G PG+ G PGPQG G R G GP GP+G G G G G G G G GP+G GP G G RG G RGP G PG GE G PG PG DGP G G+ G++G GA G G G G PG G++G RGS G IGP G PG+ G RG E G++G G G QG G+PG G GD+GL G G GN G G G +G PG GL GP G G TG GE G PG GP G G PG PG AG G G AG PG+ GLPG G +G G G++G G+ G PG G G G+ GP G PG +G PG GPPG GL G +G PGPAG +G G+ G GP G +G+ G++G G G GP G PG G PG GPAG G G G+ G P GP+G G PGP GI G G++G +G+PG+ G +G+ G G PG PG G G+ G +G G GP+G+ G GP G G G+ M L L ++ S+ D++++ +D ++ GL + +++ H+ + + A D +DP + A LV EKE + + V + D L + D+ Y + + L++L S +I V
Sbjct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core: 197.978 bits (502), Expect = 1.846e-47 Identity = 223/495 (45.05%), Postives = 261/495 (52.73%), Query Frame = 0
Query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
GPQGF G RG PG G GP G G G+ G G GE+G G G GPRG+PG G G +G RG+ G G G G PG G G+ G GP GP G +G RG +G+ G G+ G+ GL G G+PG+ G G+PG G G PGA G G +GP+G QGL GP G PG+ G+ GP G+DG+PG +G G G+ GP G PGP GP G G+ G PG +G G PG G G G GEAG PG GLPG G EG RG G RG G G G RG G PGL GP G GPKGNPG RG+ GP G KGS+G +GP G G QG RGL G GP G G PG +G PG+ G GE G G+ +G PGP G+ PG GIPG PG G G G G +G+ G G PG GP G G G +G G GPRG G+ G G PG G++
Sbjct: 289 GPQGFQGTRGEPGEAGLQGPTGAMGPRGLPGPPGKDGMPGEDGEAGPAGNAGSPGPRGMPGLPGQPGLKGHRGLPGVDGSKGDAGAPGEKGSAGVMGPVGPVGPTGPAGPRGE------RGREGAPGQAGARGLDGNPGAPGQPGSVGKPGPPGFTGIPGAKGDMGYMGPKGDQGLQGPRGEAGRPGAPGENGMPGPAGKDGSPGD------KGSMGAPGIAGPQGFPGPRGPDGLPGSQGEPGIKGAPGQPGERGYKGDQGIKGEAGQPGPRGLPGTVGPEGKRGKRGMRGPTGPAGPTGERGSPGLPGLPGPDGPVGPKGNPG------------DRGIQGPPGVKGSNGD---IGPPGLPGLQGLRGLPGRVGPDGRDGPPGERGIPGADGKPGEQGPQGL---QGLPGPMGI---PGDKGIPGEPGKAGEPGAAGPPGPRGDNGKDGLPGAQGPPGPQGQDGQRGEAGPTGPRGFQGLPGALGSPGAPGKD 750 HSP 4 Score: 85.8853 bits (211), Expect = 5.412e-13 Identity = 108/267 (40.45%), Postives = 127/267 (47.57%), Query Frame = 0
Query: 763 GPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAGRNVNM 1029
GP G +GT G PG G QG GA G G G G+ G+PG+ G E G G+ G PG RG G PG PGL+G H+G PG+ G G G PG KGS+G GPVGP GP TGP GP GE G +G PG +AGA G+ G+ G+PG G G PGPPG G PG G G G KG+QG L G +G G PG GE+GM GP G+ G G +M
Sbjct: 289 GPQGFQGTRGEPGEAGLQGPTGAMGPRGLPGPPGKDGMPGEDG---EAGPAGNAGSPGPRGMPGLPGQPGLKG---------------------HRGLPGVDGSKGDAGAPG---EKGSAGVMGPVGPVGP------------TGPAGPRGERGREGAPG------QAGARGLDGNPGAPGQPGSVGKPGPPGFTGIPGAKGDMGYMGPKGDQG------------------LQGPRGEAGRPGAPGENGMPGPAGKDGSPGDKGSM 492
BLAST of collagen alpha-1 chain vs. nr
Match: gi|1070590823|ref|XP_018392324.1| (PREDICTED: fibril-forming collagen alpha chain-like [Cyphomyrmex costatus]) HSP 1 Score: 583.178 bits (1502), Expect = 0.000e+0 Identity = 512/919 (55.71%), Postives = 598/919 (65.07%), Query Frame = 0
Query: 121 NINGV-DPCAEVECQPVECPVETYTPMGECCPVCPQGFSEPEETVRPSFPSPPPYEPPYEPPFEPPYE---EPYVPPYEEPYVPPYEDPYTPPYAPPYEEPYEPPYEDPYAPPYEQPDSETPVM--VDAPGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGE-KGPS--------PDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
+N V + + +P E V+ + E + + E +E + SP PP F E E ++ +P ++ EEP D P E E+ + V PG RG GR G+ GRPG+ G+PG PG PG PG PGPPGP P++ + QL S E KGP+ P+ SY+Q QVGP+GPRG PG GPPGPQGFQG +GE G+ G PGPPG GPRGL GLPGKDG SG+DGE GP G G G+RG+PG+PGLPG KGHRGFPGLDGAKG G GEKG GSPGS GPVGPMGPAGPRGERGREGPSGPPGLRG+DG+ G PG+PG+IGKPG PGFPG PG KGD G+ GP G+ GLQGPRG+SGRPG+PGE+G GP G DG GEKG+ G+ G G GFPG RG PG++G+PG G KG G G G KG++G+KG+ G GPRGLPGP G+ G+RG+RG+RGP G G GE G PG RG+PG+DGP GP+GQ GDRGP GA GPKG GD GRPGS GLQG RG GR G G+PG G RG GADGK G+ G G QGLPGP+G PG++G G G+DG PG PG+ GPRGD G +G G G PGP+G G RG PG GPRGFQG+PGA G G GKDGEAG+ G G PG G G RG PGE G G PG+ G RGE G G +G G PG KG+ G G PGL+GLPG RG+PG +G KG G+ GP+GP+GP G GERG QG GP GPPGEP +GDPGSPGP GE GA G G+RG G QG+ GFPGP G+ G PG+ G G PG KGEQGNPG G GE G G GL G+KG RG+PG RGE G+MGPPG G G
Sbjct: 24 QVNAVKNRLRKQRSKPQEHQVQHSSNDYEYDYNYNENYDEYDEKNETTTISPSRAIPPDITQFSERSEITTEAFLRRETPTDLPALMTTQFYDHSRNLEEPSSTSARDHSVSPTEILPGESNIYSSVAVPGP---RGVPGRPGDAGRPGDSGYPGQPGTPGIPGPPGPPGPVPDVSLYYQQLALSEANEDKGPTGAAASLYGPEALSYIQTQVGPMGPRGPPGPAGPPGPQGFQGTRGETGELGSPGPPGMPGPRGLPGLPGKDGISGEDGETGPPGSPGSVGQRGIPGIPGLPGLKGHRGFPGLDGAKGEQGIPGEKGSMGSPGSTGPVGPMGPAGPRGERGREGPSGPPGLRGLDGIAGPPGQPGAIGKPGSPGFPGNPGVKGDQGSQGPTGNQGLQGPRGESGRPGQPGETGPQGPQGIDGIPGEKGATGAIGPVGVIGFPGARGQPGISGNPGIPGAKGAPGFPGDRGLKGDTGVKGDAGMPGPRGLPGPPGNEGKRGKRGMRGPIGSVGSPGERGIPGERGLPGSDGPIGPQGQPGDRGPSGAVGPKGATGDPGRPGSTGLQGARGLMGRPGVSGKPGNPGERGIQGADGKPGEQGLPGQQGLPGPIGTPGERGYPGERGKDGEPGNPGSPGPRGDSGKEGPPGVQGLPGPSGSDGARGLPGPTGPRGFQGLPGAAGNPGVPGKDGEAGVQGPPGPPGIVGDRGERGLPGEIGLTGPPGSMGPRGETGAQGSEGLIGLPGLKGDKGSFGSPGLLGLPGARGLPGESGQKGERGTIGPIGPEGPSGHIGERGPQGEVGPPGPPGEPAERGDPGSPGPIGEPGAPGNPGERGPHGLQGLPGFPGPQGLIGLPGLKGDHGYPGLKGEQGNPGLTGNRGEIGAPGPIGLTGAKGIRGDPGVRGEPGLMGPPGIIGHVG 939 HSP 2 Score: 301.982 bits (772), Expect = 1.794e-80 Identity = 416/1177 (35.34%), Postives = 499/1177 (42.40%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPS-------PDPFSYMQAQVGPVGPRGSPGM---------QGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGP---SGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGT---------AGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPP------------GGRGMPGADGPSGPKGQSGDRGPPGAAGPK------GKHGDTGRPGSPGLQGL---------------RGSPGRIGP---------------------------RGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKD---GEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAP---GLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGL------VGLPGQRGMPGPAGSKGSS------------------GSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSP------------------GPAGEAGATGM---MGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG----------------------RNVNMIIYDCFVTILGTCNCLYITRVNKDG---------KVLKDPLESMESR--APQGAEDLLEEWDQ-VDPQACQEQKGPRVQWGLMVVQDRKVILDQLGHLETEVL---------QDCLDQLDLLVVWVPGVLKVS-------VANRDLLERRVSMDPKDYLGPLAPLVSAEKEENKDQLANLV----------HQVLVDALETRDHLEQLDQWDPQEDLAYPDNLAKLEILD 1221
PG G +G G G G GE G PG G G+PG GP GP P + G +GPS D + Q G +G GSPG QG GP G QG QG G+ G PG PG GP+G G+ G GE G G GP G G PG RG PG+ G PG G +G PG G +G G TG KG++G PG G GP G G RG+RG GP G PG RGI G G PG G IG G PG G G+ G GA G G PG G +G G GRPG SGK G PG+ G G G PG G PG QG PGP G PG G PG G G G SG++GP G G+ G G G RGLPGPTG G +G G G G PG GE G G RG+PG G +GP G G RG GA G + G GD G GSPGL GL RG+ G IGP RG PG GP GEPGA G G+ GP GLQGLP G PG +GL G PG G+ G PG G +G+PG G G G PGP G +G +G G PG RG G+ G PG GH G G G G GLPG +G G G PG G IG+PG P G++GE+G PG GP G GP+G PG +G GL +G G RG PG G G + G G GP+G GK G G+ G G GPPG PGA G G P GP GEAG G+ G RG PGP G++G G G G G G RG G +G G+PG VG G PG GL G G G RG PG G G +GP G PG G YD +I + G ++ + E R + E+L + + V P + + D+ + + T +L DQ + + + +K++ ++ LL + + + EK+ K L L +Q L + + + W D +L ILD
Sbjct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core: 234.958 bits (598), Expect = 5.849e-59 Identity = 302/692 (43.64%), Postives = 352/692 (50.87%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQG---EAGDHGPPGPPGSLGPRGLS------GLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTP------GSPGPRGFQGMPGAP---------------------------GKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDG 892
A G +G GD GR G TG G G G PG+ G PG PG E+G +Q G G +G PG QG PGP G G++G E G G PG PGS GPRG S G+ G G SG DG G GPTGP G +GLPG G PG G G G+ G G G G++GE G PG IG GP G GPRGE G +G G GL G+ G G+ G PG +G PG G PG G KG+ G GP G +GP G G G GE G GPPG+ G+ GSPG G PG G PG RG GL G PG GP+G G G G G G+KGE G G G G G+ G G G +G G PG GEPG G G+ G GPSGP G G G PG G KG GD GRPG+PG G G PG G +G+ G G +G G+ G G G +GL GLPG GP G++GL G PG+ G PG G GP G PG G G PG G TGP G G P G PG +G G PGA G+AG G +G G G+ G G +G +G+RG G++GA G G GL+G +G PGL G G PG G PG G PG+ G PG+ G PGP G G+ GS+GP G +G
Sbjct: 568 AVGPKGATGDPGRPGSTGLQGARGLMGRPGVSGKPGNPG---------------------ERG--------IQGADGKPGEQGLPGQQGLPGPIGTPGERGYPGERGKDGEPGNPGSPGPRGDSGKEGPPGVQGLPGPSGSDGARGLPGPTGPRGFQGLPGAAGNPGVPGKDGEAGVQGPPGPPGIVGDRGERGLPGEIGLTGPPGSMGPRGETGAQGSEGLIGLPGLKGDKGSFGSPGLLGLPGARGLPGESGQKGERGTIGPIGP---EGPSGHIGERGPQGEVGPPGPPGEPAERGDPGSPGPIGEPGAPGNPGERGPHGLQGLPGFPGPQGLIGLPGLKGDHGYPGLKGEQGNPGLTGNRGEIGAPGPIGLTGAKGIRGDPGVRGEPGLMGPPGIIGHVGPSGPPGNVGPSGVPGLPGIKGDAGDIGRPGNPGPIGNPGLPGIDGIKGESGSPGSQGPTGSQGPQGLPGERGLSGLPGSPGPIGNRGLRGAPGEVGQPGKTGAEGPPGPPGLTGPAGAPGHIGETGPEGSIGKPGPSGIGGRPGDKGPPGTPGAAGPSGPPGLPGPLGPTGPTGPTGERGPKGEAGPQGVEGPQGPRGKPGPAGLEGIKGARGEEGQKGAKGHRGFTGLQGLSGSPGLVGEKGIPGLPGLPGKDGEPGIRGNPGREGNPGPIGPAGNPGSRGPSGEEG 1227 HSP 4 Score: 202.216 bits (513), Expect = 9.591e-49 Identity = 250/566 (44.17%), Postives = 286/566 (50.53%), Query Frame = 0
Query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
PG G G+ G GP GSPG G RG G PG PG G +G PG GA G QG PG +G+ G GS GP+GP G AG P+GE RG GP+G G RG GI GP G PG +G+PG PG G PG KG G +GP G G +G G++GRPG PG QG+ G PG G G G +G G PGA G+ G G G+ G G G PGD+GL G G G+ G PG N G RG G G G G PG G GERG PGS GP G QG PG G +G G G G PG+ G G QG G G PG G G+PG G++G G PG G PG PGP G PG +G PG G G+ G PG G +G SG +GP G G P G G RGL G TGP G G PGA G+PG PG GEAG +QG PGPPGI G G RGLPG G G PGS+G GE G G GL G G +G+ G G G++G PG GL G +
Sbjct: 280 LPGKDGISGEDGETGPPGSPGSVGQRGIPGIPGLPG------------LKGHRGFPGLDGAKGEQGIPGEKGSMGSPGSTGPVGPMGPAG------PRGE------------RGREGPSGPPGLRGLDGIAGPPGQPGAIGKPGSPGFPGNPGV------KGDQGSQGPTGNQGLQGPRGESGRPGQPGETGPQGPQGIDGIPGEKGATGAIGPVGVIGFPGARGQPGISGNPGIPGAKGAPGFPGDRGLKGDTGVKGDAGMPGPRGLPGPPGNEGKRGKRGMRGPIGSVGSPGERGIPGERGLPGSDGPIGPQGQPGDRGPSGAVGPKGATGDPGRPGSTGLQGARGLMGRPGVSGKPGNPGERGIQGADGKPGEQGLPGQQGLPGPIGTPGERGYPGERGKDGEPGNPGSPGPRGDSGKEGPPGVQGLPGPSGSDGARGLPGPTGPRGFQGLPGAAGNPGVPGKDGEAG---------------VQGPPGPPGIVGD---RGERGLPGEIGLTGPPGSMGPRGETGAQGSEGLIGLPGLKGDKGSFGSPGLLGLPGARGLPGES 791
BLAST of collagen alpha-1 chain vs. nr
Match: gi|307181545|gb|EFN69107.1| (Collagen alpha-1(I) chain [Camponotus floridanus]) HSP 1 Score: 577.015 bits (1486), Expect = 9.386e-179 Identity = 494/784 (63.01%), Postives = 564/784 (71.94%), Query Frame = 0
Query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
RG+ GR G+ GRPG++G+PG PG PG PG PGPPG P++ + QL S A +KGP+ P+ + Y+QAQVGP+GPRG PG G PGPQGFQG +GEAG+ G PG PG+ G RGL GLPGKDG +G+DGE G G GP G RGLPGMPGLPG KGHRGFPGLDGAKG G +GEKG +G+PG +GP+GPMGPAGPRGERGREG SGPPGLRG DG+ G PG+PG++GKPGPPGFPGIPGSKGD G+ GPKGS GLQGPRG+SGRPG+PGE+G G GKDG GEKG+ G+ G G GFPGPRG G +G+PG G KG +G G G KG+SG+KG+ G GPRGLPG G+ G+RG+RG+RGP G GP GE G PG RG+PG DGP GP+GQ GDRGP GA GPKG GD GRPG PGLQGLRG GR G G+PG G RG GADGK+G+ GP G QGLPGP+G PG++G G PG+DG PG PG+ GPRGD G +G G GPPGP G G RG+PGS GPRGFQG+PGA G G GKDGEAG+ G G PG G G RG PGERG +G PG G +GE G G DG G PG KG G G PGL+GLPG RG+PG G KG G+ GPVGP+GP G GERGLQG GP GPPGEP +GDPG PG GE GA G GD G G QG+ GFPG G+ G PG+ G RG PG KGEQGNPG G PGE G GL GL G+KG RGE G RGE G+MGPPG PG G
Sbjct: 151 RGEPGRPGDAGRPGDVGYPGQPGSPGIPGPPGPPGNVPDVSLYYQQLALSQANQDKGPTGAAAPLYGPEAYPYIQAQVGPIGPRGHPGPPGAPGPQGFQGTRGEAGEPGSPGSPGAPGSRGLPGLPGKDGINGEDGEIGSPGSPGPAGLRGLPGMPGLPGIKGHRGFPGLDGAKGEQGVSGEKGSTGAPGPMGPIGPMGPAGPRGERGREGSSGPPGLRGPDGIIGPPGQPGAVGKPGPPGFPGIPGSKGDQGSQGPKGSQGLQGPRGESGRPGQPGETGPQGAQGKDGSPGEKGATGAIGPVGLPGFPGPRGQLGESGNPGIPGAKGASGLPGERGFKGDSGVKGDTGMPGPRGLPGAPGNEGKRGKRGMRGPIGATGPPGERGAPGMRGLPGPDGPVGPQGQIGDRGPVGAIGPKGAVGDLGRPGPPGLQGLRGLMGRPGASGKPGNPGERGIQGADGKSGEQGPPGSQGLPGPLGAPGERGYPGEPGKDGEPGNPGSPGPRGDTGKEGPPGIQGPPGPAGNDGARGSPGSVGPRGFQGVPGATGNPGVPGKDGEAGIQGPPGSPGPIGNRGERGIPGERGFMGFPGPMGPKGETGTQGADGLTGLPGLKGERGSTGAPGLLGLPGARGLPGEPGQKGERGALGPVGPEGPPGHIGERGLQGEIGPPGPPGEPAERGDPGPPGFIGEPGAAGKPGDTGPQGLQGLPGFPGQQGLIGLPGLKGDRGYPGLKGEQGNPGLSGSPGEAGSPGLIGLTGAKGIRGESGARGEPGLMGPPGIPGHVG 934 HSP 2 Score: 276.559 bits (706), Expect = 2.963e-72 Identity = 374/942 (39.70%), Postives = 434/942 (46.07%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPS--PDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQG---------------------------QQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESG------QDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPG------------RPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESG------------------MKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGP---------LGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGP---KGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPG------------KIGPRG---------------------------EPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPR---GFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGD------------------------PGSPGP---------------------AGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSV---GGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPG 1018
PG+ G G+ G +G G PG G G PGMPG PG+ G G P L+ + +Q GEKG + P P + +GP GPRG G +G GP G +G +G+ G GP G G GPRG SG PG+ GE+G +DG G +G TG G GLPG PG G G G PG+ GAKG G GE+G G G G G GP G G G EG G G+RG G TG PGE G+ G G PG G G +G +G GP G+ G +G GD GRPG RPG SGK G PG+ G G G G G PG QG PGP GAPG G PG G G G G GP+G++G +G G +GPRG G G+ G G G G AG GP GE G PG RG G GP GPKG++G +G G G KG+ G TG PG GL G RG PG G +G+ G IG RG EPGA GK G GPQGLQGLP G PG +GL G PG G+ G PG G +G+PG G G G PG G +G +G G G R G G PG PG G G G G PG GLPG +G G G PG G IG+PG PG+ G G G PGP+G G +GP GL G G G+PG GS G+ G G G G GK G G G G VGPPG PG G+ PG PG AGE G G G +G GPQG +G PGP G+ G+ G G G G+KG +G G G PG PG G+ GL G G GEPG RG G G PG
Sbjct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core: 207.223 bits (526), Expect = 2.647e-50 Identity = 292/765 (38.17%), Postives = 356/765 (46.54%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPG---------------------TPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPG---------MPGLPGPKGH------------------------------RGFPGLDGAKGTIGSTGE------------------KGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGA------------------------------GGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGA---PGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGP---PGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRG------QPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGL------NGPPGPPGPT------------------GPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLV 864
PGE+G +GD+G G+TG PG G PG PG G PGM G PGP + P Q G++GP VG +GP+G+ G G PGP G QG +G G G G PG+ G RG+ G GK GE G G G GP G PG+RG PG PG PGP+G RGF G+ GA G G G+ +GE G PG G +G GP GP+GE G +G G GL G+ G G+ G PG +G PG G PG PG KG+ GA +G PG G G+ G G+PG++G G G GF G++G G G G +G+PG +G PGL+GSPG G G G +G G +GESG +GE G MGP G+PG G PAG PG +G PG PG +PGA G +G G+ G+ GP PG G G G++G PG GL GL+G G G RG PG IG RG GA G+TGQ G PG GPPG GL GPPG G+ G G GP G PG G+ GPPG PG G +GERG G GP+G +G G GK G G +G G G+ G +G +G RGF G +G GSPG PG +G G GL G G PG +G+PG +G PGL+
Sbjct: 483 PGERGFKGDSGVKGDTGMPGPRGLPGAPGNEGKRGKRGMRGPIGATGPPGERGAPGMRGLPGPDGPVGP------QGQIGDRGP-----------VGAIGPKGAVGDLGRPGPPGLQGLRGLMGRPGASGKPGNPGERGIQGADGKSGEQGPPGSQGLPGPLGAPGERGYPGEPGKDGEPGNPGSPGPRGDTGKEGPPGIQGPPGPAGNDGARGSPGSVGPRGFQGVPGATGNPGVPGKDGEAGIQGPPGSPGPIGNRGERGIPGERGFMGFPGPMGPKGETGTQGADGLTGLPGLKGERGSTGAPGLLGLPGARGLPGEPGQKGERGALGPVGPEGPPGHIGERGLQGEIGPPGPPGEPAERGDPGPPGFIGEPGAAGKPGDTGPQGLQGLPGFPGQQGLIGLPGLKGDRGYPGLKGEQGNPGLSGSPGEAGSPGLIGLTGAKGIRGESGARGEPGLMGPPGIPGHVG------------PAGSPGNIGSPGAPG---LPGAKGDAGDLGRPGNPGPIGNPGLPGMDGNKGESGSPGPQGLDGLQGPQGLSGERGLPGLPGSPGSIGNRGLHGAPGETGQPGK------PGTEGPPGSPGLVGPPGSPGHVGEIGPEGPIGKPGPPGIGGRPGDKGPPGIPGAAGPSGPPGLPGPLGPTGPTGLAGERGPKGEAGPQGVEGPQGPRGKPGPIGLEGTKGDRGEE---GPKGAKGHRGFNGLQGLPGSPGLPGEKGMPGLSGLSGKDGEPGIRGSPGREGNPGLI 1206 HSP 4 Score: 181.8 bits (460), Expect = 1.644e-42 Identity = 226/530 (42.64%), Postives = 265/530 (50.00%), Query Frame = 0
Query: 530 FNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGA---------AGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMP---GPAGSKGSSGSQGPVGPDGPRGKQGER------GLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTG------------LPGSKGARGEP---GPRGESGMMGPPGRPGLAGRN 1026
F G +G G G+PG G PG RG PGL G+ G+ GE G++G G PGP G +RG G PG PG G RG PG DG G +G SG++G GA GP G G+ GR GS G GLRG G IGP GQPG +G G PG G G G QG QG P G +GL GP G+ G PG PG GP+G G DG PG G TG G G PG PGPRG G G PG G G +GLPG+ G G+ G +G G PG RG PGAPG G+ G G+ GP G GPPG G PG RG+P GP G +G G +GPVG GP+G G+ GLQG+ G + G PGA G PG+PG G GA G G++G PG QG+ PGP G PG RG PG G+ G PG+ PG PGP G TG G+ GARG P GPRG G+ G G PG+ G++
Sbjct: 248 FQGTRGEAGEPGSPGSPGAPGSRGLPGL---------------------PGKDGINGEDGEIGSPGSPGPAG---------LRGLPGMPG---LPGIKGHRGFPGLDGAKGEQGVSGEKGSTGAPGPMGPIGPMGPAGPRGERGREGSSGPPGLRGPDGIIGPPGQPGAVGKPGPPGFPGIPGSKGDQGSQG------PKGSQGLQGPRGESGRPGQPGETGPQGAQGKDG---SPGEKGATGAIGPVGLPGFPGPRGQLGESGNPGIPGAKGA---SGLPGERGFKGDSGVKGDTGMPGPRGL---PGAPGNEGKRGKRGMRGPIG---------ATGPPGERGAPGMRGLPGPDGPVGPQGQIGDRGPVGAIGPKGAVGDLGRPGPPGLQGLRGLM---GRPGASGKPGNPGERGIQGADGKSGEQGPPGSQGL---PGPLGAPGE------RGYPGEPGKDGEPGN---PGSPGPRGDTGKEGPPGIQGPPGPAGNDGARGSPGSVGPRGFQGVPGATGNPGVPGKD 705 HSP 5 Score: 145.976 bits (367), Expect = 2.022e-31 Identity = 193/470 (41.06%), Postives = 222/470 (47.23%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGP---------------------------LGPKGTAGQS---------------------GRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLG---------EPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAG 655
A G G G G G TG PG +G PG G+PG PG G G L P + GE+G +Q ++GP GP G P +G PGP GF G+ G AG PG GP+GL GLPG G+ G G G +G G PG +G G PGL G G G PGL G G G GE G G PG +GP G G GP G G G G PGL G G G G PG+ G G PG PG+ G+KG+ G+ GP+G GLQGP+G SG G PG G PG G G G+PG TG PG G GP G+PGL G PG GP G G + G GPKGE+G +G G GPRG PGP G G +G RG GP G G G PG PG +GMPG G SG G+ G RG PG G
Sbjct: 752 ADGLTGLPGLKGERGSTGAPGLLGLPGARGLPGEPGQKGERG---ALGPVGPEGPPGHIGERG--------LQGEIGPPGPPGEPAERGDPGPPGFIGEPGAAGK------PGDTGPQGLQGLPGFPGQQGLIGLPGLKGDRGYPGLKGEQGNPGLSGSPGEAGSPGLIGLTGAKGIRGESGARGEPGLMGPPGIPGHVGPAGSPGNIGSPGAPGLPGAKGDAGDLGRPGNPGPIGNPGLPGMDGNKGESGSPGPQGLDGLQGPQGLSGERGLPGLPGS---PGSIGNRGLHGAPGETGQPGKPGTEGPPGSPGLVGPPGSPGHVGEIGPEGPIGKPGPPGIGGRPGDKGPPGIPGAAGPSGPPGLPGPLGPTGPTGLAGERGPKGEAGPQGVEGPQGPRGKPGPIGLEGTKGDRGEEGPKGAKGHRGFNGLQGLPGSPGLPGEKGMPGLSGLSGKDGEPGIRGSPGREG 1201
BLAST of collagen alpha-1 chain vs. nr
Match: gi|746835840|ref|XP_011068616.1| (PREDICTED: LOW QUALITY PROTEIN: fibril-forming collagen alpha chain-like [Acromyrmex echinatior]) HSP 1 Score: 573.548 bits (1477), Expect = 1.299e-177 Identity = 490/826 (59.32%), Postives = 556/826 (67.31%), Query Frame = 0
Query: 211 APPYEEPYEPPYEDPYAPPYEQPDSETPVMVDAPGEQ---------GNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGE-KGPSPDPFS--YMQAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
AP Y+ D + + S P + PGE G RG GR G+ GRPG+ G+PG PG PG PG PGPPGP P++ + QL S E KGPS S Y+QAQVGP+GPRG PG G PGPQGFQG +GE G+ G PGPPG GPRGL GLPGKDG SG+DGE GP G G G+RGLPG+PGLPG KGHRGFPGLDGAKG G++GEKG GSPG +GPVGPMGPAGPRGERGREG SGPPGLRG+DG+ G PG+PG IGKPG PGFPG PG KGD G GP G+ GLQGPRG+SGRPG+PGE+G GP GKDG GEKG+ G+ G+ G GFPG +G PG G+PG G KG G G G KG++G+KG+ PGP G+ G+RG+RG+RGP G GP GE G PG RG PG+DGP GP+GQ GDRGP G G KG GD GRPG GLQG RG GR G G+PG G RG GADGK G+ G GLQGLPGP+G PG++G +G G+DG PG PG GPRGD G +GL G G PGP+G G RG PG G RGFQG+PGA G G GKDGEAG+ G G PG G G RGFPGERG IG PG G RGE G G DG G PG KG+ G G PGL+GLPG RG+PG G KG G GP+GP+GP G GERG QG GP G PGEP +GDPG PG GE GA G G+RG G QG QGFPGP G+ G PG+ G RG PG KGEQGNPG G GE G G G+ G+KG RG+PG RGE G+MGPPG G G
Sbjct: 108 APTTTHFYDHGRSDEISSTSARDHSVLPTEI-LPGESNIYSSVAVPGPRGSPGRPGDDGRPGDSGYPGQPGTPGIPGPPGPPGPVPDVSLYYQQLALSQANEDKGPSGAAASLPYIQAQVGPMGPRGPPGPPGSPGPQGFQGTRGETGELGSPGPPGMPGPRGLPGLPGKDGISGEDGETGPSGSPGLVGQRGLPGIPGLPGLKGHRGFPGLDGAKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGREGSSGPPGLRGLDGIAGLPGQPGVIGKPGSPGFPGNPGIKGDQGPQGPTGNQGLQGPRGESGRPGQPGETGPQGPQGKDGIPGEKGATGAIGSVGVVGFPGAQGQPGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDA--------PGPPGNEGKRGKRGMRGPIGSVGPPGERGVPGERGFPGSDGPIGPQGQPGDRGPAGTVGSKGATGDPGRPGPAGLQGARGLMGRPGASGKPGNPGERGIQGADGKPGEQGLPGLQGLPGPIGTPGERGYSGERGKDGEPGNPGPPGPRGDTGKEGLPGVQGLPGPSGSDGARGLPGPIGSRGFQGLPGAAGNPGVPGKDGEAGVQGHPGPPGMVGDRGDRGFPGERGLIGPPGPMGPRGETGTQGSDGLIGLPGLKGDKGSFGSPGLLGLPGARGLPGEPGQKGERGIIGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDPGPPGLIGEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSHGEIGVPGPIGITGAKGIRGDPGVRGEPGLMGPPGIIGHVG 924 HSP 2 Score: 288.5 bits (737), Expect = 4.307e-76 Identity = 370/913 (40.53%), Postives = 436/913 (47.75%), Query Frame = 0
Query: 244 PGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGM---------------------------PGPPGPQPNLEPFINQLQQSAGGEKGP----SPDPFSYMQAQVGPVGPRGSPGM---------QGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAG---------QSGRDGPKGESGMKGELGQMGPRGLPGPTGSAG---------------RRGRRGIRGPAGPPGPLGEPGP---PGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGL---RGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGL---PGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQG------------ERGLQGITGPVGPPGE-----------------PGAQGDPGSP---------------------------GPAGEAGATGM---MGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPGRPGLAG 1024
PG+ G G+ G G +G PG +G G PG+PG PG+ PGP GP + P + ++ G GP D + + Q G +G GSPG QGP GP G QG QG G+ G PG PG GP+G G G GE G G G G G PG +G PG PG PG G +G PGL G +G G TG KG++ GP G G G RG RG G GPPG RG+ G G PG G IG G PG G G+ G GA G G PG G +G G GRPG SGK G PG+ G G G PG G PG QG PGP G PG G G G G G +G++G G G+ G G G RGLPGP GS G + G G++G GPPG +G+ G PG RG+ G GP GP+G++G +G G G G GD G GSPGL GL RG PG G +G+ G IGP G G G G+ GPQG G PG G P ++G GPPG G PG PGN G RG G G G PGP G G G +G G PG +G QG PG PG G G G G+ G G+ PG +G+ G G PG G +G G PG G +G PGL G G G G PG+ GP G GLPG G+ G +GS GS G G GP GP G++G RGL+G G +G PG+ PG +G PG P GP GE G G+ G RG PGP G++G G G G G G RG G +G G+PG VG G PG G G G G RG PG G G +GP G PG G
Sbjct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core: 272.707 bits (696), Expect = 4.977e-71 Identity = 354/797 (44.42%), Postives = 405/797 (50.82%), Query Frame = 0
Query: 257 GETGRPGEMGFPGT---------PGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYMQAQV-------GPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGES------GQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKG-SPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGP---PGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPR---GKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGD---RGSP---GPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTGLPGSKGARGEPGPRGESGMMGPPG 1018
G G GE+G PG PG+PG G+ G GE GPS P Q + G G RG PG+ G G QG G++G G GP GP G +GP G G G++G S G DG G G G GK G PG PG PG KG +G G G +G G GE G G PG GP GP G G GE+G G G G+ G G G PG PG+ G PG G PG+PG +G G G KG +PG G G G+ G G G +GPPG+ G GE+G PGS G GPQG PG RG G GS KG G GR GP G G +G +G+ PG +G G G RGI+G G P GE G PG +G+PG G G +G SG+RG PG GP G GDTG+ G PG+QGL G G G RG PG IG R G QGLPG G PG G G G G+PG PG G RGD G G G GPPGP GP GE GT GS G G+PG G G G G GLPG GLPGE G++G RG G IG G G GE G G GPPG PG G GPPGL+G PG G PG G G GSQG GP G G +G+RG G+ G G PG PG+ G+ G PGP G GA G+ GD RG P GP G+ G GP G PG+ G G GLPG KG+ G+ G G PG G GL G+ G KG G PG +G +G GP G
Sbjct: 248 GTRGETGELGSPGPPGMPGPRGLPGLPGKDGISG------------------EDGETGPSGSPGLVGQRGLPGIPGLPGLKGHRGFPGLDGAKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGREGSSGPPGLRGLDGIAGLPGQPGVIGKPGSPGFPGNPGIKGDQGPQGPTGNQGLQGPRGESGRPGQPGETGPQGPQGKDGIPGEKGATGAIGSVGVVGFPGAQGQPGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDAPGPPGNEGKRGKRGMRGPIGSVGPPGERGVPGERGFPGSDGPIGPQGQPGDRGPAGTVGS------KGATGDPGRPGPAGLQGARGLMGR------PGASGKPGNPGERGIQGADGKP---GEQGLPGLQGLPGPIGTPGERGYSGERGKDGEPGNPGPPGPRGDTGKEGLPGVQGLPGPSGSDGARGLPGPIGSR---------------GFQGLPGAAGNPGVPGKDGEAGVQGHPGPPGMVGDRGDRGFPGERGLIGPPGPMGPRGETGTQGS---DGLIGLPGLKGDKGSFGSPGLLGLPGARGLPGEPGQKGERGI---IGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDPGPPGLIGEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSHGEIGVPGPIGITGAKGIRGDPGVRGEPGLMGPPGIIGHVGPSGPPGNIGPSGAPGLPGVKGDAGDTGRPGNPGPIGNPGLPGIDGIKGESGSPGSQGLTGFQGPQG 990 HSP 4 Score: 271.552 bits (693), Expect = 1.090e-70 Identity = 354/847 (41.79%), Postives = 405/847 (47.82%), Query Frame = 0
Query: 248 GNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDPFSYM----QAQVGPVGPRGSPGMQGPPGPQGFQGQQGEAGDHGPPGPPGSLGP------RGLSGL----------PGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGE---------PGSIGKPGPPGFP------------------------GIPGSKGDMGAGGPKGSPGLQGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGS---PGSTGAPGPQGFPGPR------------------GAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGPTGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGPRGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGDPGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPG-----------GPGPKGNPGHKGPPGLVGLPGQRGMPGPA---------------GSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPGPPGIPGSPGMMGGRGLPGSKGEQGNPGSVGGPGEPGPSGLTG 994
G RG G G G+PG +G PG+PG PG PG+ G GPQ P NQ Q GE G P Q + G G +G+ G G G GF G QG+ G G PG PG+ G RGL G PG +G+ G+ G GP G GPPG+RG+PG G PG G G G G +G G+ G KG +G PG GP G G G G G G G PG RGI G G PGE PG IG PG G+ G+PG +G G G G+ GL GP G G G PG +G G PGKDG G +G PG G G +GFPG R G+ GL G PG G KG+ G G G G G+ GE GQ G RG+ GP G G G G RGP G GP G PG P RG P GP G G+ G PG G +G HG G G PG QGL G PG G RG PG G +G PG G G++G G G+ G G GD G+ G PG G PG G+ GP G PG G +G PG PG G +G+ G PG+PGP G G+PG G G +G G GL TG G QG G RG P G GSPG G RG G PG G PG G G PG KGPPG+ G G G PG + G KG +G QG GP GPRGK G GL+GI G G G+ GA+ G G TG+ G GSPG G +G PG PG PG G G RG PG +G G G VG PG GPSG G
Sbjct: 365 GLRGLDGIAGLPGQPGVIGKPGSPGFPGNPGIKGDQGPQ---GPTGNQGLQGPRGESGRPGQPGETGPQGPQGKDGIPGEKGATGAIGSVGVVGFPGAQGQPGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDAPGPPGNEGKRGKRGMRGPIGSVGPPGERGVPGERGFPGSDGPIGPQGQPGDRGPAGTVGSKGATGDPGRPGPAGLQGARGLMGRPGASGKPGNPGERGIQGADGKPGEQGLPGLQGLPGPIGTPGERGYSGERGKDGEPGNPGPPGPRGDTGKEGLPGVQGLPGPSGSDGARGLPGPIGSRGFQGLPGAAGNPGVPGKDGEAGVQGHPGPPGMVGDRGDRGFPGERGLIGPPGPMGPRGETGTQGSDGLIGLPGLKGDKGSFGSPGLLGLPGARGLPGEPGQKGERGIIGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDP------GPPGLIGEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSHGEIGVPGPIGITGAKGIRGDPGVRGEPGLMGPPGIIGHVGPSGPPGNIGPSGAPGLPGVKGDAGDTGRPGNPGPIGNPGLPGIDGIKGESGSPGSQGL---TGFQGPQGPLGERGLP---GLPGSPGPIGNRGLRGAPGEIGQPGKTGAEGPPGPPGLSVGGRPGDKGPPGVPGAAGPSGPPGLSGPPGPTGPTGLTGERGPKGETGPQGVEGPQGPRGKPGPAGLEGIKGDRGEEGQKGAK---------GHRGFTGLQGLSGSPGLVGEKGIPGLPGFPGKDGEPGIRGNPGREGNPGPIGPVGNPGSRGPSGEEG 1187 HSP 5 Score: 248.44 bits (633), Expect = 2.922e-63 Identity = 334/754 (44.30%), Postives = 386/754 (51.19%), Query Frame = 0
Query: 243 APGEQGNRGDAGRLGETGRPGEMGFPGTPGMPGTPGMPGPPGPQPNLEPFINQLQQSAGGEKGPSPDP--------FSYMQAQVGPVGP---------RGSPGMQGPPGPQG---------FQGQQGEAGDHGPPGPPGSLGPRGLSGLPGKDGESGQDGEGGPQGPTGPPGKRGLPGMPGLPGP------KGHRGFPGLDGAKGTIGSTGEKGESGSPGSIGPVGPMGPAGPRGERGREGPSGPPGLRGIDGMTGAPGEPGSIGKPGPPGFPGIPGSKGDMGAGGPKGSPGL---QGPRGDSGRPGRPGESGKMGPPGKDGFNGEKGSPGSTGAPGPQGFPGPRGAPGLNGSPGPLGPKGTAGQSGRDGPKGESGMKGELGQMGPRGLPGP---TGSAGRRGRRGIRGPAGPPGPLGEPGPPGGRGMPGADGPSGPKGQSGDRGPPGAAGPKGKHGDTGRPGSPGLQGLRGSPGRIGPRGQPGKIGP---RGEPGADGKTGQVGPQGLQGLPGPMGPPGDKGLTGPPGQDGNPGTPGNAGPRGD---PGTDGLNGPPGPPGPTGPSGERGTPGSPGPRGFQGMPGAPGKAGHNGKDGEAGLPGQTGLPGEQGKEGSRGFPGERGAIGSPGAPGLRGEAGGPGLDGPPGGPGPKGNPGHKGPPGLVGLPGQRGMPGPAGSKGSSGSQGPVGPDGPRGKQGERGLQGITGPVGPPGEPGAQGDPGSPGPAGEAGATGMMGDRGSPGPQGMQGFPG 952
PGE+G G G +G G PG G PGTPG PG PG G PG P L+ G KG +P P M+ +G VGP RG PG GP GPQG G +G GD G PGP G G RGL G PG G+ G GE G QG G PG++GLPG+ GLPGP +G+ G G DG G G G +G++G G G G GP+G G RG GP G G +G+ G G PG PG G+ G G PG PG GD G G G GL GP G G G G G +G PG G G GSPG G PG +G PG G G G GP+GP+G +G G GP+GE G G G+ RG PGP G G G G RGP G G G PGP G G+PG G G G G++G PG G HG+ G PG G+ G +G G G RG+PG +GP G G G G +GP G GLPG G GD G G PG GNPG PG G +G+ PG+ GL G GP GP G G G PGSPGP G +G+ GAPG+ G GK G G PG GL + G +G PG GA G G PGL G G G G G GPK G GP G+ G G RG PGPAG +G G +G G G +G +G GLQG++G G GE G G PG PG GE G G G G+PGP G G PG
Sbjct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he following BLAST results are available for this feature:
BLAST of collagen alpha-1 chain vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 9
BLAST of collagen alpha-1 chain vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of collagen alpha-1 chain vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold38_size502422:197093..203361- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold38_size502422-snap-gene-2.22 ID=maker-scaffold38_size502422-snap-gene-2.22|Name=collagen alpha-1 chain|organism=Tigriopus kingsejongensis|type=gene|length=6269bp|location=Sequence derived from alignment at scaffold38_size502422:197093..203361- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'collagen alpha-1 chain' has the following synonyms
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