glycine receptor subunit alpha-2, maker-scaffold394_size185225-snap-gene-0.24 (gene) Tigriopus kingsejongensis

Overview


Name	glycine receptor subunit alpha-2
Unique Name	maker-scaffold394_size185225-snap-gene-0.24
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000011250 (supercontig:LSalAtl2s:LSalAtl2s76:68800:74845:-1 gene:EMLSAG00000011250 transcript:EMLSAT00000011250 description:"maker-LSalAtl2s76-augustus-gene-0.8")

HSP 1 Score: 313.923 bits (803), Expect = 2.748e-106
Identity = 148/317 (46.69%), Postives = 212/317 (66.88%), Query Frame = 0

Query:   21 LNDEVLVQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVI---LRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYP------GVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIE 328
            L  +++    Y     P    +  L++N SINLRN++ V+EK Q + LE+SLR+ W DPR+ V+   L   +++V+ N  +  E FWIPDIF+D+ KA+R PT  ++PA+LR++ D  +RYSSR+N+DVAC MDF R+P+DEQ+CEIKFESFGFT++Q+ F W   +SN+N NI+L QF         Y T  Y  S+P      G+I++I+L R+I YH++QTYIPS +FV +AWLSLFI+PE+IP              AMF  VR N PKVSY+S+LDIWM+ C+ F+F  ++EF+IVS  I+ G+++  D +E
Sbjct:   30 LAAKIVFSKDYSIHEAPRVYADKPLLVNFSINLRNVLSVDEKQQIITLETSLRLYWEDPRIAVLPSALSESRNYVTFN-PKVAEYFWIPDIFIDKSKAVRVPTYFVKPASLRVYNDSTVRYSSRLNFDVACEMDFHRFPVDEQLCEIKFESFGFTTEQLMFSWKKGSSNINQNISLAQFDMNKSLNCLYFTHIYNTSHPFMSIFVGLIMKIHLRREIGYHIVQTYIPSMIFVFVAWLSLFISPESIP--------------AMFGAVRNNVPKVSYVSYLDIWMVACIFFVFSCILEFTIVSYSIKCGRKSFGDKVE 331

[Close]

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000009137 (supercontig:LSalAtl2s:LSalAtl2s575:53505:62115:1 gene:EMLSAG00000009137 transcript:EMLSAT00000009137 description:"maker-LSalAtl2s575-augustus-gene-0.8")

HSP 1 Score: 249.21 bits (635), Expect = 2.054e-77
Identity = 122/253 (48.22%), Postives = 168/253 (66.40%), Query Frame = 0

Query:   38 PTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQ---DFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSY 287
            P      L +N+SINLRNI EVNEK   + +E+S+RM+W DPR+           DF++ N +     FWIPD+F+D  K  R P   ++P +LR + +  +R S RIN+DV C MDF +YP DEQ+C+I  ES+  + D ++  WD   S +NPNITLDQF   I F+  Y T     SY G+I+RI L R I YH+IQT+IPS +FVI+ W+SLF++P+AIPGRV MVM+++LT +AMF+ VR +TP+VSY
Sbjct:   40 PHNKGSPLHVNISINLRNIFEVNEKLSLITVETSIRMIWQDPRIYPTNNGSDWDFDFITFNGKIVKRKFWIPDVFIDGAKNARIPKYHLQPMSLRYYKNRNLRLSLRINFDVICQMDFHKYPNDEQLCDIPLESWDTSMDDMKLNWDLSNSVINPNITLDQFSPLIYFK-KYDTQSDMTSYSGLIIRIQLQRLIPYHVIQTFIPSIVFVILGWISLFLDPQAIPGRVKMVMLSLLTSLAMFNSVRDSTPQVSY 291

[Close]

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000001321 (supercontig:LSalAtl2s:LSalAtl2s1223:193582:196888:1 gene:EMLSAG00000001321 transcript:EMLSAT00000001321 description:"snap_masked-LSalAtl2s1223-processed-gene-2.46")

HSP 1 Score: 159.458 bits (402), Expect = 4.740e-46
Identity = 91/266 (34.21%), Postives = 147/266 (55.26%), Query Frame = 0

Query:   67 VLESSLRMVWVDPRVDVILRTGQDFVSINSE-RRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKS--YPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRG---KRNIADI 326
            +LE  +  +W D R    L T +    +  E   I  FW PD +   VKA     +    A+LR+ PD  ++Y+  I   + C M F  YP+D QIC ++ +SFG+  + I + W      +  +I +D    EI   + Y+ +Y  +   + G+ +RI L R + +H+ Q+YIPS +FV IAW+S  +  + +PGR+ + + T+LTL++MF+ VR  TP+VSY+  LD+W+ +C++F+F  L E+  V  L  R    K+  ADI
Sbjct:    1 MLELKISHMWADLR----LNTSEMKRPLELEPTSISDFWTPDSYFHHVKASNEVKIMTPVASLRVRPDKIIQYTKIILVTLGCPMSFYNYPMDNQICRLELQSFGYDMNLINYTW-MRPPQMKKDIIIDNHDVEI---ADYTFEYSPEGIRFSGLGIRIELKRHLGFHITQSYIPSIIFVAIAWMSFHVPSDVVPGRMVLSVTTLLTLISMFNSVRSLTPQVSYMKALDLWVFVCLVFVFSSLAEYGFVLYLTSRSGWQKKVDADI 258

[Close]

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000007306 (supercontig:LSalAtl2s:LSalAtl2s410:406162:408817:-1 gene:EMLSAG00000007306 transcript:EMLSAT00000007306 description:"maker-LSalAtl2s410-snap-gene-4.17")

HSP 1 Score: 150.984 bits (380), Expect = 2.279e-44
Identity = 73/188 (38.83%), Postives = 115/188 (61.17%), Query Frame = 0

Query:   37 PPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDV---ILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILR 221
            P    +  L +N SI   NI+++ EK + + LE ++++ W DPR+ V    L     +V  NS R  E FWIPDIF+D+ K++R+P + ++PA LR++ +  + +S+ IN+DV C MDF R+P+DEQ+C + FESFG T+D++QF WD  A+++N    L Q+   + F + +   Y    YPG   R
Sbjct:   23 PKLESDKPLQVNFSIEQLNILDIVEKSEIITLEMNMKLKWRDPRISVRPTALSNIDKYVLFNS-RVAEYFWIPDIFIDKAKSIRNPLLHVKPAYLRVY-NNSILFSNLINFDVFCEMDFHRFPMDEQVCTVNFESFGLTTDEVQFAWDIXANSINTTFPLTQYICSVQFVNFHKAKYADILYPGTQYR 208

[Close]

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000010137 (supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 gene:EMLSAG00000010137 transcript:EMLSAT00000010137 description:"snap_masked-LSalAtl2s66-processed-gene-1.3")

HSP 1 Score: 152.525 bits (384), Expect = 1.977e-43
Identity = 77/256 (30.08%), Postives = 141/256 (55.08%), Query Frame = 0

Query:   67 VLESSLRMVWVDPRVDVI-LRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS---NVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRR 318
            V ++ LR  W D R+    +++  D    N    ++A W P++F    K      V +    +RIHP+G++ Y  R+    +C M+  RYP+D QIC ++  SF  T+ ++   WD        V  ++ + QF+   +  +      +  +Y  ++   +L R I +HLIQ+Y+PS L V I+W+S +++ + +P RV++ ++T+LT+ +  SG   + P+ SY+  +D+WM +C  F+F  L+EF++V+ L R+
Sbjct:    4 VTDTYLRQKWSDSRLSHPDIKSPLDLAXPN---LVKAIWKPEVFFPNAKEANFQFVTVPNVLIRIHPNGEILYILRLRLKFSCMMELSRYPLDTQICAMQISSFSKTTKELLLEWDPTHELSVTVAKDLRMPQFEMTKITTNRCHETNHMGNYSCLVAEFHLHRSIGFHLIQSYLPSVLIVAISWVSFWMDVDCVPARVTLGVITLLTVSSQVSGT--SVPQTSYVKAIDVWMGVCTAFVFAALVEFTLVNYLWRK 254

[Close]

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58")

HSP 1 Score: 147.132 bits (370), Expect = 2.737e-40
Identity = 95/316 (30.06%), Postives = 152/316 (48.10%), Query Frame = 0

Query:   30 GYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVL--IPSLILIFN 343
            GYD + L P      L +   + + +   ++E      +   L   W D R+     T +D V   S    E  W+PD F    K      V  +   +R+H DG + Y  R    +AC MD   YP+D Q C ++ ES+G+T   +   W         +  L QF       +         +Y  + L   L R I Y + QTY+PS L V+++W+S +IN EA   RV++ + T+LT+  + +GVR + P++SY+  +DI+++MC +F+F  L+E++  S+     K+   DIIE   L +  IPS+   FN
Sbjct:   90 GYDIR-LRPNFGGDPLYVGFDLTIASFDSISEVSMDYTITMYLNQYWKDERLS--FSTEEDKVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRQKPVVGVEDAQLPQFTIVGWETNERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAASSS----SKQPEEDIIELQDLRMSPIPSIRNRFN 398

[Close]

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000012971 (supercontig:LSalAtl2s:LSalAtl2s98:1296021:1320554:-1 gene:EMLSAG00000012971 transcript:EMLSAT00000012971 description:"maker-LSalAtl2s98-augustus-gene-14.11")

HSP 1 Score: 141.739 bits (356), Expect = 8.199e-39
Identity = 63/107 (58.88%), Postives = 87/107 (81.31%), Query Frame = 0

Query:  215 YPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRR-GK 320
            YPGVI++I L R INYHL+QTY+PS +FV +AWLSLF+ P++IPGR++M M T+LTL AMF  VRQ+TP+VSY+S LDIWM  C++F+F  L+E+ I+ +L+ + GK
Sbjct:  164 YPGVIMKIILKRNINYHLLQTYLPSGIFVFVAWLSLFLPPQSIPGRITMAMTTLLTLAAMFGAVRQSTPRVSYVSALDIWMCTCIIFVFFALLEYVIMLSLMTKCGK 270

HSP 2 Score: 87.8113 bits (216), Expect = 1.753e-19
Identity = 41/116 (35.34%), Postives = 72/116 (62.07%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDV---ILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSR 141
             GY+   +PPT +   L + VS++LRNI+E++E  Q + +E++LR+ WVD R+ V   +  +  D++ ++  +  +  W PDI++D  K LR PT    PA+LRI+ +  +RY++ 
Sbjct:   41 GGYNIHEIPPTENGDPLTVEVSVSLRNILEIDEHKQLLTIETTLRLYWVDERLSVKHLLENSSMDYILLHP-KVAKLIWFPDIYIDFAKDLRIPTYMTPPASLRIYRNSTIRYATH 155

[Close]

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5")

HSP 1 Score: 140.584 bits (353), Expect = 3.096e-38
Identity = 79/276 (28.62%), Postives = 142/276 (51.45%), Query Frame = 0

Query:   24 EVLVQAGYDAQSLPPTMDN--GALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQ--DFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRW-DSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIW 294
            + ++  GYD +  P   ++  G   INV+I LR I  +++      ++ + R  W D R+     T     ++++    ++   W+PD F    K  R   + +    +RI P+G++ YS RI+  +AC MD R YP+D+Q+C ++  S+G+  D + + W + D   V P + L +F  E    +          Y  + + +   R+ +Y+LI  Y+P  + VI++W+S +++  AIP RVS+ + T+LT+    SG+    P VSY   +D+W
Sbjct:   17 DSILGTGYDKRIRPSGKNDTDGPATINVNIYLRTISRIDDVKMEYSVQVTFREQWNDERLRYYDDTHGHLKYLTLTDPTKV---WMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYLWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVTTNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVW 289

[Close]

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000002942 (supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-1 gene:EMLSAG00000002942 transcript:EMLSAT00000002942 description:"maker-LSalAtl2s168-augustus-gene-6.6")

HSP 1 Score: 141.354 bits (355), Expect = 3.934e-38
Identity = 83/317 (26.18%), Postives = 164/317 (51.74%), Query Frame = 0

Query:   30 GYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQ-DFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIK---------------FESFGF-------TSDQIQFRW-DSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRN 322
             YD ++ P      A  + + + +R++  +N     +V++  LR  W D R++     G  + + +N    ++A W P+++    K      V +    +RI P G + Y  R+    +C M+  ++P+DEQ C ++               F++  F       T+ ++  RW D+   +++  + + QF+   V  S     ++  +Y  ++ +++L R + +H++Q+YIP+ L V+I+W+S +++ E++ GR ++ + T+LT+ +  S V+   P VSY+  +DIWM  C  FIF  L+EF+ V+ + RRGK+ 
Sbjct:   18 NYDRRATPTNHIGKATEVAIKLYVRSLGSINP--DTMVIDLYLRQHWFDSRLN---HPGLLEPMDLNDPNLVKALWKPEVYFPNAKDAEFQYVTVPNVLVRIDPGGAILYMLRLKLKFSCMMELSKFPLDEQYCTMEIASCKIIIHKGIISTFKNHNFFSLIVSKTTKELILRWKDTKPIDISKEVKMPQFEISTVIPSICQETFHIGNYSCLLAQLHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVESVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFVNYMWRRGKKK 329

[Close]

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Match: EMLSAG00000011237 (supercontig:LSalAtl2s:LSalAtl2s76:25652:33160:-1 gene:EMLSAG00000011237 transcript:EMLSAT00000011237 description:"snap_masked-LSalAtl2s76-processed-gene-0.6")

HSP 1 Score: 129.798 bits (325), Expect = 4.619e-37
Identity = 62/128 (48.44%), Postives = 92/128 (71.88%), Query Frame = 0

Query:  183 DASNVNPNITLDQFQAEIVFESSYST-DYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEF 309
             +++VN NI+L  F   I    SY+T   Y+ SYPGV +++ LSRK+ YH++QTYIPS + V+++W SLFI  E IPGRV MV M+++TLMA+++ VR+  P+VSYIS LD+WM   + FI ++L+ +
Sbjct:   25 KSNDVNKNISLPNFDFFIETNESYNTGSIYSLSYPGVAMKVRLSRKLTYHILQTYIPSIMLVVVSWFSLFIPIEEIPGRVGMVTMSLVTLMALYTVVRKEVPQVSYISLLDLWMFSSMSFIVLILLHY 152

[Close]

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor)

HSP 1 Score: 172.555 bits (436), Expect = 1.636e-48
Identity = 98/295 (33.22%), Postives = 161/295 (54.58%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321
            +GYDA+ + P      + +  +I + +   V E      +   LR  W D R+        D + ++    +++ W PD+F    K      V      LRI  +GK+ YS R+   ++C MD + +P+D Q C ++ ESFG+T + + F W SD    V   +TL QF  +   E  Y T +Y    +  + ++ +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+    SG R + PKVSY+  +DIWM +C+LF+F  L+E++ V+ + R+ K 
Sbjct:   56 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKE 347

[Close]

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|121578|sp|P23416.1|GLRA2_HUMAN (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor)

HSP 1 Score: 172.17 bits (435), Expect = 1.836e-48
Identity = 98/295 (33.22%), Postives = 161/295 (54.58%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321
            +GYDA+ + P      + +  +I + +   V E      +   LR  W D R+        D + ++    +++ W PD+F    K      V      LRI  +GK+ YS R+   ++C MD + +P+D Q C ++ ESFG+T + + F W SD    V   +TL QF  +   E  Y T +Y    +  + ++ +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+    SG R + PKVSY+  +DIWM +C+LF+F  L+E++ V+ + R+ K 
Sbjct:   56 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKE 347

[Close]

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|6647527|sp|O93430.1|GLRA1_DANRE (RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor)

HSP 1 Score: 171.785 bits (434), Expect = 2.527e-48
Identity = 98/295 (33.22%), Postives = 159/295 (53.90%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321
            +GYDA+ + P      + +  +I + +   + E      +   LR  W DPR+        D + ++    +++ W PD+F    K      V      LRI  +G + YS RI   +AC MD + +P+D Q C ++ ESFG+T + + F WD   +  V   +TL QF  +   +  Y T +Y    +  +  R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV + + T+LT+    SG R + PKVSY+  +DIWM +C+LF+F  L+E++ V+ + R+ K 
Sbjct:   46 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARQHKE 337

[Close]

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|78099775|sp|Q61603.3|GLRA4_MOUSE (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor)

HSP 1 Score: 171.785 bits (434), Expect = 3.459e-48
Identity = 97/296 (32.77%), Postives = 160/296 (54.05%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRW--DSDASNVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321
            +GYDA+ + P      + +  +I + +   V E      +   LR  W DPR+        D + ++    +++ W PD+F    K      V      LRI  +G + YS R+   ++C MD + +P+D Q C ++ ESFG+T + + F W  D+ A  V   +TL QF      +  Y T +Y    +  + ++ +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV + + T+LT+    SG R + PKVSY+  +DIWM +C+LF+F  L+E++ V+ + R+ K 
Sbjct:   55 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRL-AYREYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKE 347

[Close]

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor)

HSP 1 Score: 169.859 bits (429), Expect = 1.817e-47
Identity = 96/294 (32.65%), Postives = 161/294 (54.76%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGK 320
            +GYDA+ + P      + +  +I + +   + E      +   LR  W DPR+        D + ++    +++ W PD+F    K      V      LRI  +G + YS R+   ++C MD + +P+D Q C ++ ESFG+T + + F W  +A   V   +TL QF  +   +  Y T +Y    +  + +R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+    SG R + PKVSY+  +DIWM +C+LF+F  L+E++ V+ + R+ K
Sbjct:   55 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK 345

[Close]

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor)

HSP 1 Score: 169.859 bits (429), Expect = 2.262e-47
Identity = 96/294 (32.65%), Postives = 161/294 (54.76%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGK 320
            +GYDA+ + P      + +  +I + +   + E      +   LR  W DPR+        D + ++    +++ W PD+F    K      V      LRI  +G + YS R+   ++C MD + +P+D Q C ++ ESFG+T + + F W  +A   V   +TL QF  +   +  Y T +Y    +  + +R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+    SG R + PKVSY+  +DIWM +C+LF+F  L+E++ V+ + R+ K
Sbjct:   55 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK 345

[Close]

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|116242496|sp|O75311.2|GLRA3_HUMAN (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor)

HSP 1 Score: 169.474 bits (428), Expect = 2.590e-47
Identity = 96/294 (32.65%), Postives = 161/294 (54.76%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGK 320
            +GYDA+ + P      + +  +I + +   + E      +   LR  W DPR+        D + ++    +++ W PD+F    K      V      LRI  +G + YS R+   ++C MD + +P+D Q C ++ ESFG+T + + F W  +A   V   +TL QF  +   +  Y T +Y    +  + +R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+    SG R + PKVSY+  +DIWM +C+LF+F  L+E++ V+ + R+ K
Sbjct:   55 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK 345

[Close]

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|12230887|sp|P07727.4|GLRA1_RAT (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor)

HSP 1 Score: 169.088 bits (427), Expect = 3.329e-47
Identity = 97/295 (32.88%), Postives = 160/295 (54.24%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRW-DSDASNVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321
            +GYDA+ + P      + ++ +I + +   + E      +   LR  W DPR+        D + ++    +++ W PD+F    K      +      LRI  +G + YS RI   +AC MD + +P+D Q C ++ ESFG+T + + F W +  A  V   +TL QF  +   +  Y T +Y    +  +  R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV + + T+LT+    SG R + PKVSY+  +DIWM +C+LF+F  L+E++ V+ + R+ K 
Sbjct:   50 SGYDAR-IRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRL-AYNEYPDDSLDLDPSM-LDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKE 341

[Close]

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|12644459|sp|Q64018.2|GLRA1_MOUSE (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor)

HSP 1 Score: 169.088 bits (427), Expect = 3.364e-47
Identity = 97/295 (32.88%), Postives = 160/295 (54.24%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRW-DSDASNVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321
            +GYDA+ + P      + ++ +I + +   + E      +   LR  W DPR+        D + ++    +++ W PD+F    K      +      LRI  +G + YS RI   +AC MD + +P+D Q C ++ ESFG+T + + F W +  A  V   +TL QF  +   +  Y T +Y    +  +  R +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV + + T+LT+    SG R + PKVSY+  +DIWM +C+LF+F  L+E++ V+ + R+ K 
Sbjct:   50 SGYDAR-IRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRL-AYNEYPDDSLDLDPSM-LDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKE 341

[Close]

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Match: gi|121579|sp|P22771.1|GLRA2_RAT (RecName: Full=Glycine receptor subunit alpha-2; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor)

HSP 1 Score: 169.088 bits (427), Expect = 3.459e-47
Identity = 97/295 (32.88%), Postives = 160/295 (54.24%), Query Frame = 0

Query:   29 AGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDAS-NVNPNITLDQFQAEIVFESSYSTDYY-AKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKR 321
            +GYDA+ + P      + +  +I + +   V E      +   LR  W D R+        D + ++    +++ W PD+F    K      V      LRI  +GK+ YS R+   ++C MD + +P+D Q C ++ ESF +T + + F W SD    V   +TL QF  +   E  Y T +Y    +  + ++ +L R++ Y+LIQ YIPS L VI++W+S +IN +A P RV++ + T+LT+    SG R + PKVSY+  +DIWM +C+LF+F  L+E++ V+ + R+ K 
Sbjct:   56 SGYDAR-IRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRL-AYSEYPDDSLDLDPSM-LDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKE 347

[Close]

BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325268048|ref|XP_023344165.1| (glycine receptor subunit alpha-4-like isoform X4 [Eurytemora affinis])

HSP 1 Score: 350.517 bits (898), Expect = 2.887e-116
Identity = 166/326 (50.92%), Postives = 225/326 (69.02%), Query Frame = 0

Query:   27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRI-----EAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVLIPSLILIFNLAYW 347
            V   Y+    P     G L I  SINLRNI++V+EK Q V LE++LR+ W DPR+       + F S+ +   +        W+PDIF+DQ K LR+P+  I+PA+LR++ D  +RYSSRIN+DVACNMDF RYP+DEQ CEIKFESFG  S+QIQ  W  ++ +VN NITL QF   +    SYSTDYY  SYPG+IL+++L+R I YH++QTYIPS +FV++AW+ +FI  E++PGRV M M TMLTL AMFS  RQN PKVSYIS LDIWM++C++F+F  + EF++V  L+R+GK+  ++  + V   ++P   L+ NL YW
Sbjct:   28 VSPNYNLHERP--YSKGPLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWIPNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSSTRQNVPKVSYISVLDIWMLICMIFVFSTMAEFTVVIVLVRQGKKEFSEQFQMVSRFMLPCFFLLVNLLYW 351

[Close]

BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325268046|ref|XP_023344159.1| (glycine receptor subunit alpha-4-like isoform X3 [Eurytemora affinis])

HSP 1 Score: 350.517 bits (898), Expect = 3.891e-116
Identity = 166/326 (50.92%), Postives = 225/326 (69.02%), Query Frame = 0

Query:   27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRI-----EAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVLIPSLILIFNLAYW 347
            V   Y+    P     G L I  SINLRNI++V+EK Q V LE++LR+ W DPR+       + F S+ +   +        W+PDIF+DQ K LR+P+  I+PA+LR++ D  +RYSSRIN+DVACNMDF RYP+DEQ CEIKFESFG  S+QIQ  W  ++ +VN NITL QF   +    SYSTDYY  SYPG+IL+++L+R I YH++QTYIPS +FV++AW+ +FI  E++PGRV M M TMLTL AMFS  RQN PKVSYIS LDIWM++C++F+F  + EF++V  L+R+GK+  ++  + V   ++P   L+ NL YW
Sbjct:   37 VSPNYNLHERP--YSKGPLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWIPNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSSTRQNVPKVSYISVLDIWMLICMIFVFSTMAEFTVVIVLVRQGKKEFSEQFQMVSRFMLPCFFLLVNLLYW 360

[Close]

BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325268044|ref|XP_023344150.1| (glycine receptor subunit alpha-4-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 350.132 bits (897), Expect = 6.724e-116
Identity = 166/326 (50.92%), Postives = 225/326 (69.02%), Query Frame = 0

Query:   27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRI-----EAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVLIPSLILIFNLAYW 347
            V   Y+    P     G L I  SINLRNI++V+EK Q V LE++LR+ W DPR+       + F S+ +   +        W+PDIF+DQ K LR+P+  I+PA+LR++ D  +RYSSRIN+DVACNMDF RYP+DEQ CEIKFESFG  S+QIQ  W  ++ +VN NITL QF   +    SYSTDYY  SYPG+IL+++L+R I YH++QTYIPS +FV++AW+ +FI  E++PGRV M M TMLTL AMFS  RQN PKVSYIS LDIWM++C++F+F  + EF++V  L+R+GK+  ++  + V   ++P   L+ NL YW
Sbjct:   44 VSPNYNLHERP--YSKGPLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWIPNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSSTRQNVPKVSYISVLDIWMLICMIFVFSTMAEFTVVIVLVRQGKKEFSEQFQMVSRFMLPCFFLLVNLLYW 367

[Close]

BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325268042|ref|XP_023344143.1| (glycine receptor subunit alpha-4-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 350.132 bits (897), Expect = 1.148e-115
Identity = 166/326 (50.92%), Postives = 225/326 (69.02%), Query Frame = 0

Query:   27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRI-----EAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVLIPSLILIFNLAYW 347
            V   Y+    P     G L I  SINLRNI++V+EK Q V LE++LR+ W DPR+       + F S+ +   +        W+PDIF+DQ K LR+P+  I+PA+LR++ D  +RYSSRIN+DVACNMDF RYP+DEQ CEIKFESFG  S+QIQ  W  ++ +VN NITL QF   +    SYSTDYY  SYPG+IL+++L+R I YH++QTYIPS +FV++AW+ +FI  E++PGRV M M TMLTL AMFS  RQN PKVSYIS LDIWM++C++F+F  + EF++V  L+R+GK+  ++  + V   ++P   L+ NL YW
Sbjct:   53 VSPNYNLHERP--YSKGPLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWIPNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSSTRQNVPKVSYISVLDIWMLICMIFVFSTMAEFTVVIVLVRQGKKEFSEQFQMVSRFMLPCFFLLVNLLYW 376

[Close]

BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325257282|ref|XP_023323536.1| (glycine receptor subunit alpha-4-like [Eurytemora affinis])

HSP 1 Score: 328.946 bits (842), Expect = 6.130e-108
Identity = 147/329 (44.68%), Postives = 225/329 (68.39%), Query Frame = 0

Query:   24 EVLVQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILRTGQDFVSINSERRIEA-----FWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVGLVLIPSLILIFNLAYW 347
            +++V+  Y+   +P T +   L+I+ SIN+RNI+EV+EK Q V +E++LR+ W DPR+         + S  +   + +      W+PDIF+D  K +R+PT   +PA+LR++ D  +RYS+RIN+DVACNMDFR YP D+Q CE+KF+SFG    Q+ F W  ++ NVN +I L QF   I    SYSTDYY  SYPG+ L+++L+R+I YH++QTYIPS LF+++ W+ LFINP++IPGRV M   T+LT  +MFS  R + PKVSY+++LD+WM+ C+ F+F  ++EF  +  LIR+ +  +A  ++++  + +P + ++FNLAYW
Sbjct:    2 QLIVEDDYNLHEIPRTENQQPLLISASINIRNILEVDEKDQIVSMETTLRLYWKDPRIKPKYEALSSYDSRGNYTNLHSSLANTIWMPDIFLDHAKTIRTPTFFSKPASLRVYNDSTIRYSARINFDVACNMDFRNYPADDQSCELKFQSFGLQRSQVHFTWIPNSINVNEHIYLSQFVFRIHAMDSYSTDYYDISYPGLKLQLHLTREIGYHIVQTYIPSTLFLVLGWMGLFINPDSIPGRVGMGTTTLLTQTSMFSSTRAHVPKVSYVTYLDVWMLFCMFFVFSTMVEFISILILIRQKRFKLAKKVQRLTRLTLPCIFMLFNLAYW 330

[Close]

BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325292244|ref|XP_023330045.1| (glycine receptor subunit alpha-4-like [Eurytemora affinis])

HSP 1 Score: 322.398 bits (825), Expect = 5.664e-105
Identity = 151/306 (49.35%), Postives = 217/306 (70.92%), Query Frame = 0

Query:   32 DAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVILR------TGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVG 331
            D   +PPT D   L ++ SIN+RNI++V E    V LE++LR++W DPR+    +      T  ++ ++N      + WIPDIFVD  K +R+PT  ++PA+LR++ D  +RYS+RIN+DVACNMDFR YP+D+Q CE+KFESFG  S+QI F W  D+ NVN NITL QF  ++    SY+TDYY   YPG+ L+I+L+R+I YHL+QTYIPS +F+++AW+ LFI  E IPGRV M M T+LT  +MFS  RQ+ PKVSYI++LD+WM++C++F+F  ++EF +V+ + R+ K+ +A  IEK+ 
Sbjct:   34 DIHEIPPTRDKKPLAVSASINIRNILDVEEVKMLVSLETTLRLLWRDPRIVPKAQYLTSRDTNGNYTNLNPSL-ASSIWIPDIFVDLAKDMRTPTFFMKPASLRVYSDSLIRYSARINFDVACNMDFRYYPVDDQTCEVKFESFGLQSNQIVFNWIPDSMNVNYNITLSQFLFKVRAIDSYATDYYDLKYPGLKLQIHLTRQIGYHLVQTYIPSTVFLVLAWMGLFIPKEIIPGRVGMGMTTILTQTSMFSATRQHVPKVSYITWLDVWMLVCMIFVFSTMVEFIVVTVISRKKKKRLAVRIEKIS 338

[Close]

BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325303461|ref|XP_023333305.1| (glycine receptor subunit alpha-1-like [Eurytemora affinis] >gi|1325303463|ref|XP_023333306.1| glycine receptor subunit alpha-1-like [Eurytemora affinis] >gi|1325303467|ref|XP_023333307.1| glycine receptor subunit alpha-1-like [Eurytemora affinis])

HSP 1 Score: 255.758 bits (652), Expect = 1.001e-78
Identity = 125/335 (37.31%), Postives = 202/335 (60.30%), Query Frame = 0

Query:   24 EVLVQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVI-------LRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIE-KVGLVLIPSLILIFNLAYWFWL 350
            ++   +GYD   +P   D G L +   +NLRNIM V+E+ + + LE +LR+ WVD RV +          T   +V ++     ++ WIPD+F+D VK +R+PT+ I  +++R++ +  +R++ R N+DV+C MDF +YP+D+Q C I FESF  T  +++  W    +NVN NITLDQF   +    SY+T+ Y + + G+   +YL R I YHL+QTYIPS L V+++W S+F++  A P RV + M  +L+L++MF   R   P   Y+S+LD WM+ C++ +F+ ++E+ I   ++      IAD +      V  P ++++FNL YW  L
Sbjct:   39 KLFKSSGYDRSRMPHDAD-GLLRVEAELNLRNIMRVDEREKMISLEVTLRLFWVDKRVHLNPAIPLENCDTDGSYVVLHPST-ADSLWIPDLFIDMVKEIRTPTIRIPTSSVRLYNNSLIRFAKRFNFDVSCQMDFHKYPVDKQTCVIHFESFSLTDKELKLSWRPTGNNVN-NITLDQFTHSVNIRESYTTNSYRQKFAGLQFTLYLRRNIYYHLVQTYIPSLLLVLLSWGSMFVHSSA-PARVGIGMTALLSLISMFGHTRSMVPHTCYVSYLDGWMLFCIVLVFLCIMEYIINLCILATYYTRIADRVSWWTRCVGAPVILVVFNLVYWLLL 369

[Close]

BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1228373653|ref|XP_021948014.1| (glutamate-gated chloride channel subunit beta-like [Folsomia candida])

HSP 1 Score: 237.269 bits (604), Expect = 3.769e-70
Identity = 119/317 (37.54%), Postives = 193/317 (60.88%), Query Frame = 0

Query:   24 EVLVQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRVDVIL-RTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNV--------NPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINPEAIPGRVSMVMMTMLTLMAMFSGVRQNTPKVSYISFLDIWMIMCVLFIFMVLIEFSIVSALIRRGKRNIADIIEKVG 331
            E L+ + Y     PPT ++    ++ S+ + N+ ++ E  + + LE +LR+ W D R+  +  R+G  F+ +N  + +E+ W+PDIF+D VK+++ P +  +PA+LR++PD  +RYS+RI   +AC MDF  YP D Q C +  +S+ ++S  +   W      +        N ++ LD  Q  +V  SS        SY G+   I L RK++YHLIQTY+PS LF+I++WLS  + PE++PGR+++ M T+LTL AMFS VRQNTP VSY+  LDIWM++C++F+F+ L+E++++  L  +  +    I   V 
Sbjct:   59 ESLIPSNYSIHEPPPTNNSEPTGVDFSVLIMNVRDIKELNEELSLEMNLRIYWKDTRLSHLADRSGDKFIVLN-PKLVESIWMPDIFIDHVKSVQQPALITKPASLRVYPDSSVRYSARITVTMACQMDFHFYPADTQRCNVDMKSYAYSSQIMALDWREGKGALLVDFLELPNFDVALDTTQNFMVNTSS-------GSYSGIRFTILLRRKLSYHLIQTYLPSTLFIIVSWLSFLVPPESVPGRMALCMTTLLTLTAMFSAVRQNTPNVSYVKALDIWMVVCIIFVFLTLVEYTVLLKLRSKKTKPPPKISSTVA 367

[Close]

BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325307059|ref|XP_023335146.1| (gamma-aminobutyric acid receptor subunit beta-3-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 225.328 bits (573), Expect = 3.541e-68
Identity = 109/231 (47.19%), Postives = 158/231 (68.40%), Query Frame = 0

Query:   27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRV---DVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINP 254
            ++ GYD  S+PP+   G + +  SINLRN++ V+E G+ V LE++LRM W D R+   D  L +  +++ +++ R     WIPDIF+DQ  +LR P + + P +LRI+ +  +RYS+R+NYDVACNMDF  YP D Q C IK+ESFG T D++   W  D +NVN NI+L QF   +   S YST YY  SYPG+IL++ L RK++YH++QT++PS +F+ IAWL+LF+ P
Sbjct:   65 IEDGYDHHSVPPSQ--GPIRVLFSINLRNVLGVDEIGERVSLETTLRMYWKDRRLKIRDEFLPSINNYLHLDN-RFANHIWIPDIFIDQAISLRQPKLHLTPISLRIYKNSTLRYSTRVNYDVACNMDFHFYPHDVQTCLIKYESFGLTKDEMYLEWGQD-NNVNKNISLAQFDVTVELVSEYSTSYYDLSYPGLILKLTLRRKLSYHMVQTFLPSAVFLCIAWLALFLPP 291

[Close]

BLAST of glycine receptor subunit alpha-2 vs. nr
Match: gi|1325307061|ref|XP_023335147.1| (glutamate-gated chloride channel-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 221.861 bits (564), Expect = 7.699e-67
Identity = 109/231 (47.19%), Postives = 158/231 (68.40%), Query Frame = 0

Query:   27 VQAGYDAQSLPPTMDNGALMINVSINLRNIMEVNEKGQYVVLESSLRMVWVDPRV---DVILRTGQDFVSINSERRIEAFWIPDIFVDQVKALRSPTVEIRPATLRIHPDGKMRYSSRINYDVACNMDFRRYPIDEQICEIKFESFGFTSDQIQFRWDSDASNVNPNITLDQFQAEIVFESSYSTDYYAKSYPGVILRIYLSRKINYHLIQTYIPSFLFVIIAWLSLFINP 254
            ++ GYD  S+PP+   G + +  SINLRN++ V+E G+ V LE++LRM W D R+   D  L +  +++ +++ R     WIPDIF+DQ  +LR P + + P +LRI+ +  +RYS+R+NYDVACNMDF  YP D Q C IK+ESFG T D++   W  D +NVN NI+L QF   +   S YST YY  SYPG+IL++ L RK++YH++QT++PS +F+ IAWL+LF+ P
Sbjct:   65 IEDGYDHHSVPPSQ--GPIRVLFSINLRNVLGVDEIGERVSLETTLRMYWKDRRLKIRDEFLPSINNYLHLDN-RFANHIWIPDIFIDQAISLRQPKLHLTPISLRIYKNSTLRYSTRVNYDVACNMDFHFYPHDVQTCLIKYESFGLTKDEMYLEWGQD-NNVNKNISLAQFDVTVEL-SEYSTSYYDLSYPGLILKLTLRRKLSYHMVQTFLPSAVFLCIAWLALFLPP 290

The following BLAST results are available for this feature:

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
BLAST of glycine receptor subunit alpha-2 vs. SwissProt
BLAST of glycine receptor subunit alpha-2 vs. nr

BLAST of glycine receptor subunit alpha-2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000011250	2.748e-106	46.69	supercontig:LSalAtl2s:LSalAtl2s76:68800:74845:-1 g...	[more]
EMLSAG00000009137	2.054e-77	48.22	supercontig:LSalAtl2s:LSalAtl2s575:53505:62115:1 g...	[more]
EMLSAG00000001321	4.740e-46	34.21	supercontig:LSalAtl2s:LSalAtl2s1223:193582:196888:...	[more]
EMLSAG00000007306	2.279e-44	38.83	supercontig:LSalAtl2s:LSalAtl2s410:406162:408817:-...	[more]
EMLSAG00000010137	1.977e-43	30.08	supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 g...	[more]
EMLSAG00000009047	2.737e-40	30.06	supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-...	[more]
EMLSAG00000012971	8.199e-39	58.88	supercontig:LSalAtl2s:LSalAtl2s98:1296021:1320554:...	[more]
EMLSAG00000011971	3.096e-38	28.62	supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1...	[more]
EMLSAG00000002942	3.934e-38	26.18	supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-...	[more]
EMLSAG00000011237	4.619e-37	48.44	supercontig:LSalAtl2s:LSalAtl2s76:25652:33160:-1 g...	[more]

Pages

BLAST of glycine receptor subunit alpha-2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|66774003\|sp\|Q7TNC8.1\|GLRA2_MOUSE	1.636e-48	33.22	RecName: Full=Glycine receptor subunit alpha-2; Fl...	[more]
gi\|121578\|sp\|P23416.1\|GLRA2_HUMAN	1.836e-48	33.22	RecName: Full=Glycine receptor subunit alpha-2; Fl...	[more]
gi\|6647527\|sp\|O93430.1\|GLRA1_DANRE	2.527e-48	33.22	RecName: Full=Glycine receptor subunit alphaZ1; Fl...	[more]
gi\|78099775\|sp\|Q61603.3\|GLRA4_MOUSE	3.459e-48	32.77	RecName: Full=Glycine receptor subunit alpha-4; Fl...	[more]
gi\|121580\|sp\|P24524.1\|GLRA3_RAT	1.817e-47	32.65	RecName: Full=Glycine receptor subunit alpha-3; Fl...	[more]
gi\|66774025\|sp\|Q91XP5.2\|GLRA3_MOUSE	2.262e-47	32.65	RecName: Full=Glycine receptor subunit alpha-3; Fl...	[more]
gi\|116242496\|sp\|O75311.2\|GLRA3_HUMAN	2.590e-47	32.65	RecName: Full=Glycine receptor subunit alpha-3; Fl...	[more]
gi\|12230887\|sp\|P07727.4\|GLRA1_RAT	3.329e-47	32.88	RecName: Full=Glycine receptor subunit alpha-1; Al...	[more]
gi\|12644459\|sp\|Q64018.2\|GLRA1_MOUSE	3.364e-47	32.88	RecName: Full=Glycine receptor subunit alpha-1; Al...	[more]
gi\|121579\|sp\|P22771.1\|GLRA2_RAT	3.459e-47	32.88	RecName: Full=Glycine receptor subunit alpha-2; Al...	[more]

Pages

BLAST of glycine receptor subunit alpha-2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325268048\|ref\|XP_023344165.1\|	2.887e-116	50.92	glycine receptor subunit alpha-4-like isoform X4 [...	[more]
gi\|1325268046\|ref\|XP_023344159.1\|	3.891e-116	50.92	glycine receptor subunit alpha-4-like isoform X3 [...	[more]
gi\|1325268044\|ref\|XP_023344150.1\|	6.724e-116	50.92	glycine receptor subunit alpha-4-like isoform X2 [...	[more]
gi\|1325268042\|ref\|XP_023344143.1\|	1.148e-115	50.92	glycine receptor subunit alpha-4-like isoform X1 [...	[more]
gi\|1325257282\|ref\|XP_023323536.1\|	6.130e-108	44.68	glycine receptor subunit alpha-4-like [Eurytemora ...	[more]
gi\|1325292244\|ref\|XP_023330045.1\|	5.664e-105	49.35	glycine receptor subunit alpha-4-like [Eurytemora ...	[more]
gi\|1325303461\|ref\|XP_023333305.1\|	1.001e-78	37.31	glycine receptor subunit alpha-1-like [Eurytemora ...	[more]
gi\|1228373653\|ref\|XP_021948014.1\|	3.769e-70	37.54	glutamate-gated chloride channel subunit beta-like...	[more]
gi\|1325307059\|ref\|XP_023335146.1\|	3.541e-68	47.19	gamma-aminobutyric acid receptor subunit beta-3-li...	[more]
gi\|1325307061\|ref\|XP_023335147.1\|	7.699e-67	47.19	glutamate-gated chloride channel-like isoform X2 [...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold394_size185225	supercontig	scaffold394_size185225:38186..44517 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	C:integral to membrane

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold394_size185225-snap-gene-0.24-mRNA-1	maker-scaffold394_size185225-snap-gene-0.24-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold394_size185225:38186..44517-

gene from alignment at scaffold394_size185225:38186..44517-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold394_size185225-snap-gene-0.24 ID=maker-scaffold394_size185225-snap-gene-0.24|Name=glycine receptor subunit alpha-2|organism=Tigriopus kingsejongensis|type=gene|length=6332bp|location=Sequence derived from alignment at scaffold394_size185225:38186..44517- (Tigriopus kingsejongensis)
TTGTTCGGCTCGGGTGGAAATGTGCTCTCTGTGATGTGAATTCGCCACAC
CATGGCCAATTGTGGTGGGATTTACATCCTCGTGATCTACTTCAGCCACA
TTGTCCACGGGTTGAACGATGAAGTGCTCGTCCAAGCTGGCTACGACGCT
CAATCCTTACCTCCAACCATGGACAATGGAGCACTGATGGTACACATAAT
ATTTTATCGAGATTTTGCATTCGGCAGCCATGTCATATGTCCTTGGGTTA
TTGGCAAGATCGCCCACCTTGGAATTTTGCTTCAATCATCCCATCAGATG
ATCCCCCAGAAAAGCAATTGTCTTTTCAACAAAGCTCAAGGGAAGAACTT
CCCTTGGGCGAGTTCGCTTTGACACATCCGTCAAACAACCCTGACTGACC
TCAATCGCTCTCCCATTGAAGTGAATCTGTTCCATGCATTAACTAATTGT
GTGCGTTTAAAAACATGAATTCTGACTCGGTGTGAGAATGAGTTCACATC
AGCATTTCTATGTTGACAGATTCACAAGTGTGTGGAAAATGTGTCTTTGA
TGTGCTCTTACTGCTTTACGTCTTAAGAGGCAGACTTTCCTCCAATTATG
ACACACTAACCACACAAGGTGTATTATTATATTATTTTCTAGAAATCCAT
GCATCAGTGTAAATGCATCACTATGTTTGGGACACAAGTTGATCCCTAAT
TCCGTTAATGGTACACGCTTTTGACAATTTTGGCACTTGCGACAGTTTTC
AAAGCCTCTCGTAACTTATTGGTGCATTTTCGAAATAAGCAATTTTGACG
GATTTTTTCAGCCCAAAGCACGAATGTGTAAAAAGTTATATACAATAACG
AAGGGAAGTAAAAAAAATCAGTTTTTTAATTGTGTTTGGCCGATCCCATA
TGTTAGGAAATGCTGCACATGTCCCATCAAATTTCAAGGAATGCCGTTTT
TAAACACCCTATGAATGCATGGCATTGGCGAAAAAATGCCTAAACGGCCT
GTCATTTATCAATAATGAAACTTGGTAGCAGTGGCTCGACCTAAAGTACT
AGGATCTTAGAGTATTAAACCCACCCGAGTTCTACTTTGGTTGACATTAA
TTATCCTTGGTGAAACGACAGGGGTACGATTGACAAGTGCATATATTTTT
ATCGGTAGGAAGGCCAATTTTTTTTCTTAAATAATGCCAACATATTTCAA
TGCTTATTCAGCCAAAAAGTACCTGAATTTAAAAAAAAAACCTTTTGATT
AAAAACGGCCTCGTTTGGTCGTTCAAGGCACTTCAGAAAGAAATTATTCA
CAAGAATATTTTTTGATATTTTTTCATTGTCTTTTTTGGGCAAAACAAAC
ATAATTCTGCTCATTGGTTGTCCAAAAGATATCAAAATCTGCCCAAATCA
TGAGCTTTCCACTATTTTCCACAGATTTCTGGATATTACTAAGGTTCCCA
TGATCCTTCTTGCGATGAGATTTGCCCAATTTTTGTATGTCCATTATTTA
GTTCTTTTTAACTATATAATTGGTTTGGGAACTGTCCCCAGATTTGACTA
CATTACATTGATGCTGTCCTGAAGGTTTGTATTTGTTTCCATGAGCAGCT
CTTTTTGCATCAGAACAGGCTGAAATTTTTTCGTCCAAAAGTACCCAATT
TGAATTTCAAACTTGCCCACTGAAGGTGAATTTTTGGCTTTTGAGACTAG
ATTGGGGTCCCTTTTGTTGGATATTTGAAAGCCAAAAGGGTTATTTTTTC
TGAAAATGGTCCATATATTTTTAAAAATTCCCGAAAAGACGAAATATTGA
AAAAATCCCGAAATTGGATTTTTTGAAAACAAATTGGTTTAATTTTGCCC
TCTCTAGTTATCGGTTTAGCTGTACAGTTCCCGGATAGACTGACCTATCT
CGAGGAACACGACACTGTGCCGGTGTTTTTTTTAAGTGATTACTTAGTCA
CTCCTTATAGATCATATACGTTTATCATCATGGAATACTCTATTTCATGG
TAGAACATACTAAACTACTCTATTCGGAATCTGACATTTTCTAAATCATT
TGGGGTCCAGGGCTCTTGATTAATTTGGTACAAGCACGGAATAGTAGCCA
TAAACTTGTCAGTTTAGCTCATTAGGCAGGGATGAAGGGTGGGATATTGG
CTGGATTGGATGGATGGTAAGCTGAAGATTCTGGCATGATATTGTGTTAG
TCCATGATTGTGCATAGTCGCTCTTCTCCCGAAATCAGCGAGCCAGAATG
TCAGAAACTTCAGCTTCGAAGCTTATTTTGTTGTTTTTGATTAAAATCTA
TTGCAGATCAATGTCTCCATCAATCTGAGAAACATCATGGAAGTCAACGA
AAAGGGCCAATACGTGGTCTTGGAGAGCTCCTTGAGGATGGTGTGGGTCG
ATCCTCGCGTGGATGTGATTTTGAGGACAGGCCAAGATTTCGTGTCCATC
AATAGCGAGAGGCGAATCGAGGCCTTTTGGATCCCCGACATTTTCGTGGA
TCAAGTCAAAGCCTTGCGATCGCCCACCGTTGAAATCCGACCGGCCACTC
TGCGGATTCATCCGGATGGCAAGATGCGATACTCGTCCAGGATCAACTAC
GACGTGGCTTGCAACATGGATTTCCGTCGCTATCCCATCGATGAGCAGAT
TTGCGAGATCAAGTTCGAGAGCTTTGGCTTCACTTCGGACCAGATCCAGT
TCCGTTGGGACTCGGACGCGTCCAATGTGAATCCGAACATCACGCTGGAC
CAGTTTCAGGCCGAAATCGTCTTTGAAAGCTCCTACAGTACGGATTACTA
CGCCAAAAGCTATCCCGGTGTCATTCTGAGGATCTACCTCTCCAGAAAGA
TCAACTATCATCTCATCCAAACCTACATTCCGAGTTTCCTCTTCGTGATC
ATTGCCTGGTTGTCCCTTTTCATCAATCCTGAAGCCATTCCAGGTGATTT
TACTCACTTTTGAAAAACGTTGATATTGTTGGCACGCACTTAAAAATTAA
CATTTTTGAAAAATTTGGCAGTGGCCGTTTGTGTATTCAAAGGAGTTGAG
AAGAGCTGCTCTTATTCGTTGCAGACAAGTTTGTGTAACCTTTTTCATTT
TCACCACTCTTCTACTCATTGTTGGATTATATGGAATATTGGTATTTAAG
TCATGAAAATTATTTAAAAGGTTGTCCGCACTCTCTTTCATGAATAGGGA
GCAAGACAAGAAGCACTTTGTTTGCGACAGTCATGTAGTTAATGTAATTA
TTCACCTATCAGGAAGTGATTGAGTGGTCGTTTCCTGCAAAGCATCAGTT
TCCGATCAGTAACACATAAGTTTTATCTATTTATGTTTTACTCTCATCAG
TCAACACTCTTTGGATTTTCGTTTCCTTATCCGTTTCCTTAAGCTGGGGA
GCGCAAAAATATAAAAGACGCACGCAACCCTTCGAGGTCTTTCTGTTGAG
AATATTAAAATCGCTATATTAGAAAGGTACTCTCGGGAATATTAGTGAAC
AACCCAGGGTTATGTAGTCATGCAGAGAGTCCTTGACGAGAAGGAGACCC
GTGTCTCGCTCTTTTGAGCCTTCTCTTGGGAGGGGGGGCCAAGAAAAGCG
GGATTTGGTCGTCTCCTAATGCTCCTGATCGTACCATTACGGTTTCTCTG
TTTTAACTCCCGTATTTCTTAGTCTCCTTCCCCGAGAGAAGGCTGAAAAA
ACAGCTGGACACAGTTATGTTTAGCTTTCGGAGGATACCAGTGATACATG
ATCACCCCTTTGAATGAGATAGTAAGTGTATCAAGCCGTTCTCTTAAATG
ACTCCAATTTCTCCCAAGCCAAAGTTGTCGTATCGTATCTATCCATGGAG
CCCTACGTAGTAGTAGTTTCAAGTTTATTTGCATTACAGTCTTTTTCATT
TGGTAAACAAATGGTTATATTACAAAAGATCGACAAAGGGGTGACAATGA
CAAGTTTTGGACATTTAAATTAATTGCACTAATAATGGTATGAGACTTTT
GACATTCATTAATATGCCCTGTAGGGTTCTCTAACTAAGTATATACAACT
TGTAGAAATAGGTATGTGTCAAATTTTCAAAACTAATTTGTTGAAAACTA
GAGTTTCTTGAATGACTAGAGTTGCTTGTGATATGTTCTTCACAACGGAG
CTGACTAGGCCTTAATAATTACCTTAATCAATATGAAAGTTTCTATTTAT
GAGTACATTGTTTATGCAATGAAAAGCATCACCTCCAGGATAAAAAATGC
AATGTATTTATAGCTATTATGTTTTAGCTAATGTAGTTTAGCTAATATAG
TTTAGCTAATATAGTTTAGCTAATATAGTTCAGCTAATATAGTTTAGCTA
ATATAGTTTAGCTAATATAGTTTAGCTAATATAGTTTAGCTAATATAGTT
TAGCTAATATAGTTTAGCTAATATAGTTTAGGTAATATAGTTTAGCTAAT
ATAGTTTAGCTAATATAGTTTAGCTATCATATTTTAGCTATTATATTTTA
GCTATCATATTTTAGCTATTATATTTTAGCTATTATATTTTACTTATTAT
ATTTTAGCTATTATATTTTAGCTATTATTTTTTAGCTATTATATTTTAGC
TATTATATTTTAGCTATCGTATTTTCGTTCTTGTAATTTAGCTCTTAATG
TATTTATTGCATCTTGAGCATTGAGTTGGTTAAAAAAACGGTTTAAATAG
CCCGCACTCCGGCGCAATTTGGCGACCTATGGGCGATCTAGATCTTTGTA
AATTTGCGTACATGGAAGAAGTAGGGGCTACTCGAATTCAAATCCGTTGC
ATTTACATCCATTGAGGTAATAGCACCGCCTTTGTGGTGGTTTGCATCTC
GGCAACAGCTGCACAGTGAGACCAAATTGCTGTATTTTGAGTGTACAGAC
AGACCCGATTTGAGTAGCTCCAGAATACACGCAGTTTAAGCCCAACTCTC
TGGCGGGTAGAAAAGGGACAGACCAAAGCCACATCAATGGATAAGCAATG
ATTATTACATGGTGAGCAGGCCGAGCATGATTTCGTTGGTGATGTCGAGC
CATTGTTGGGATGCTTTATTTGGCTCTTCCTGCCCTGATTATGTGTCTGT
CCTTGGTTTTAGGTCGCGTTTCCATGGTCATGATGACTATGCTGACTTTA
ATGGCCATGTTCAGCGGAGTGCGACAAAACACGCCCAAGGTAAGAAAATC
TCACTGCGAGAATCTTCTCCACCAAATACCTCACGACGGCATGGACACTA
AAGTATGCCCAGTTTTACAATAGCTCACCGGAAAGTTTAAATTTTCATAA
CCATGAACATGCAAGTTGCCTTAAAAGAGCTCAGGCCAGCCCTCCAAGTG
GTGCATTGGAATTTGAGAGCTTGAGATGTTGAAAACTCTTGGGTTATTGT
CTTTGCTCAACCTAAAAGCATCTACTGTAGGCTCTAACTCAATCCTTGGT
AGTCGCAATCATAGCTCACTCAATCGATTGAAACCCGCACTGATTAAACT
TATGTTTGGTCTCAGTATACCTACGTAGTAGAATGGGAGCGAGCCAAATG
GAGGCAGGTTAGCAGGTCATTCATTGTGGGTGGTGGTGCTCTCGGTCTTG
TTTATCTTACTCAGGAGAGCCAAGTTCGAAAGTGTCACCTCCAGAGGAAT
CTGGCCATTTCCAATCTACTGTATGTACAGAGACGACCAGGCTGTCTCCC
TGGGTTAGATGTTATTTTTTAGCACTATTGTTGTAAAATGTCGAGGAAAG
GCTCAAACTTGCTGAACCAGTTTGGGCAAAATTGAACCAATTGGAGGTTA
CACCTTCAGAGTGAGACCACTCATTTCCTATCCACCGGCTCCTCAGGTTC
AAGAGGGCAGAGACTCCGTTGGGCCTTTGCGAGTGGTTTCCAGTAATGAA
TTGGGGAGGAGAGATAGAGCGACGACAAACGGACCCAAATTAACCCCAAA
TGCGGCAAAAAAGTCGCGCGTTCCTGGCCTCAGGCTAATTGGGGGGAGAC
TCTCGGGTGGAAAGGTAGCAATTTGGCCACAAAGCCCATTAATGAGAGTT
GGAGGACGCCCCTCGGGCTCGCCTGAAGGCACTCATCCTCGAGATCCTCC
ATTCCAATTTCAGGTCAGCTACATCAGTTTCCTGGACATTTGGATGATCA
TGTGCGTCCTGTTCATCTTCATGGTCCTGATCGAGTTCTCGATAGTGTCT
GCCCTCATCCGGCGAGGCAAGCGGAACATTGCCGATATCATCGAGAAAGT
GGGCCTGGTCCTCATCCCATCTCTCATCCTCATTTTCAATCTGGCTTATT
GGTTCTGGCTGGCGGCCTCGGCCAGCCTCTAA

Synonyms

The feature 'glycine receptor subunit alpha-2' has the following synonyms


Synonym
Tk12268

Add to Basket

Pages

Pages

Pages

Search form