neurogenic locus notch-like protein protein 1, maker-scaffold428_size174301-snap-gene-0.25 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of neurogenic locus notch-like protein protein 1 vs. L. salmonis genes
Match: EMLSAG00000006904 (supercontig:LSalAtl2s:LSalAtl2s391:104959:129512:1 gene:EMLSAG00000006904 transcript:EMLSAT00000006904 description:"maker-LSalAtl2s391-augustus-gene-1.14") HSP 1 Score: 106.301 bits (264), Expect = 3.968e-23 Identity = 74/205 (36.10%), Postives = 114/205 (55.61%), Query Frame = 0
Query: 177 VPTGFQKIDLPFME-HDQDVGHLPSVFIAPVGFKVPEGYKGHPLPYDPDLAKVNAEGTTLRPSGIHLVSRTTTL---PTLVDSPTERTIVTESESAAGSLIKNKIKLAKQRPSLSSLYRGKVQTDTLDNKDENKKKRRILTKIVRRPFKTVRNFFKAPSTK-----EPATEQEPVTT-----TITTTTTQEPITTPKAEEISYVN 367
V +G ++++PF++ H++D LPSVF+AP+GF +P G+ GHPLPYDP L K + +R VSR+ L + + T + + S + NKIKLA+QRPSL + YR K + +T + + ++K+RILTKIVR+P R +F + + K P EQ T +++TTT P+T+ EE + N
Sbjct: 892 VQSGQSQLNVPFIDVHNEDPSLLPSVFVAPLGFDIPHGFAGHPLPYDP-LVK---DDNYIRHQ---YVSRSPILHTTTVTTTTIADTTTTAPATATTKSSLLNKIKLARQRPSLETFYRNKAK-NTESYEAKKRQKKRILTKIVRKPINFNRQYFSSQAAKFQHLANPNGEQTTTLTTVTFPSLSTTTISLPVTSANTEESLFRN 1088 HSP 2 Score: 92.4337 bits (228), Expect = 7.121e-19 Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 0
Query: 1360 KQSLLAKYTNARKTHLLKDTILSKAVPATSPELGRIPVGSNPNVYKQWAGNSLSQSEFERQVLGVSTASEVSVKSMICVRGRCYNADDMT 1449
K K+++ R +K+ + +V S E R P GS+P V+K W GNSLSQ+EFER +LGVSTA+EVSV+S IC+RG+C++A++ T
Sbjct: 2015 KSKFYEKFSHQR----VKNNFFN-SVNNISKEKPRYPKGSDPKVFKNWGGNSLSQAEFERSILGVSTATEVSVQSRICIRGKCFDANEDT 2099 HSP 3 Score: 56.6102 bits (135), Expect = 6.061e-8 Identity = 43/127 (33.86%), Postives = 59/127 (46.46%), Query Frame = 0
Query: 593 SKYEG-GYGQRIRSRQRLAFWKNDRDQEQSETQLNYQ----------GTTEEPSKAPR--EYKQKFRPFFDQLYEKLTTDEDKAEEVSQRPLRRRFKGRRRSTTTPNPYTINAQIYEVDPNSGEILS 706
S EG GYGQR+R+R+ FW + Q S T + S R YK+++RPFFD LY+ L + S R + +RR T++P TI A+IYEV P S +S
Sbjct: 1168 SNSEGTGYGQRLRARKXPTFWASKYQQRASTTITATTSTSTPKRITTAVQRDSSSTQRADSYKKRYRPFFDTLYDNLNDQPSQKPSTSYIRPRNIWSKKRRPTSSPFNPTIAAEIYEVHPKSRARIS 1294
BLAST of neurogenic locus notch-like protein protein 1 vs. nr
Match: gi|1325265816|ref|XP_023337484.1| (uncharacterized protein LOC111708371 [Eurytemora affinis] >gi|1325265824|ref|XP_023337492.1| uncharacterized protein LOC111708371 [Eurytemora affinis]) HSP 1 Score: 117.472 bits (293), Expect = 1.412e-22 Identity = 90/264 (34.09%), Postives = 135/264 (51.14%), Query Frame = 0
Query: 53 PQSQAKET-LATLNPVVKLVPAPDLSQDGPPIIELGGT-RETVHGAPFVQHQQFSDHLSGFVPVDFEHITSGEKVHRHPHLDQAPKDFSVVVSGFNEQPNSDQLAEY----LKQGSQRDIGAYIAPHNQNVPTGFQKIDLPFMEHDQDVGHLPSVFIAPVGFKVPEGYKGHPLPYDPDLAKVNAEGTTLRPSGIHLVSRTTTLPTLVDSPTERTIVTESESAAGSLIKN-KIKLAKQRPSLSSLY-RGKVQTDTLDNKDENKKK 308
PQS+ ++ L TLN ++ +P+PDLS+ GPPIIEL + V G PF + + DHL+GFV +DF+ TSGE P D+ S++V G N D+ E L + D ++ +++ P GF KID+PFM+ G LP VFIAP+G +P+GYKG PL +P + E L S + P + + ++ + ++N + K K+RPSLS Y + K + +TL K E +K
Sbjct: 212 PQSRPDQSYLETLN-AIQTIPSPDLSKFGPPIIELDSKDGQIVVGQPFNRGTE-KDHLAGFVSLDFDGFTSGE-----PE-DKTRNKLSLLVGG---NQNFDKDVESGLVNLLNSEKEDPPTFVQNSDKDAPAGFTKIDIPFMDPTDHTGVLPKVFIAPIGKPIPKGYKGKPLLSEPTGVQTTTETILLVESPYSTEKPLFRFQEIKSKPNTKIEEEKPTTSTQAPVRNFRFKTQKERPSLSRFYLKNKEKLETLSRKPEKVEK 464 HSP 2 Score: 90.8929 bits (224), Expect = 1.811e-14 Identity = 79/269 (29.37%), Postives = 129/269 (47.96%), Query Frame = 0
Query: 1212 PGSRINHPKAIDTDSFNVPQVDDVNPPKKFLDDKLG-YVVKKRERLIQSWVNRQHKDKPRYGTAKTPLATTEYPDSVEASTTSPQHLLAPSTTSLTTLLALDESEEYESLQEEVDKAFFP-FAPT-----IPPKGKYSQEEESDPKESPKKHQLK----KQSLLAKYTNARKTHLL---KDT-------------------ILSKAVPATSPELGRIPVGSNPNVYKQWAGNSLSQSEFERQVLGVSTASEVSVKSMICVRGRCYNADD 1447
PG + + + SF Q+ + + +D+K +VKKRE I++WV+R +Y K P S +S + Q + T LA SEE E+ + AF P +PT +P +++ + ++ + + K S KY+ + + L KDT L+ V P+ +P+G+N +++K +AG+ LSQ++FER++LGVSTA+E+SVKSMICV+GRC+NAD+
Sbjct: 1408 PGVQSVDQEGVKVHSFGAEQIIPLRKSESLIDEKEKEGLVKKREEWIKNWVSR------KYNKPKFPRV------SFTSSGLNSQ---------VETTLAPVLSEEAETNKINSVPAFTPTISPTSDSNVLPKNSRFNVNFDVTVRDGSDEKLISGSEVKSSRFDKYSRKKVKNSLFHKKDTKSREEDQIEVDHEVKVDEAALNPLVAFFQPK--GVPLGANTDIFKNYAGDQLSQADFERKILGVSTATEISVKSMICVKGRCFNADE 1653 The following BLAST results are available for this feature:
BLAST of neurogenic locus notch-like protein protein 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of neurogenic locus notch-like protein protein 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of neurogenic locus notch-like protein protein 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold428_size174301:170005..174478- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold428_size174301-snap-gene-0.25 ID=maker-scaffold428_size174301-snap-gene-0.25|Name=neurogenic locus notch-like protein protein 1|organism=Tigriopus kingsejongensis|type=gene|length=4474bp|location=Sequence derived from alignment at scaffold428_size174301:170005..174478- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'neurogenic locus notch-like protein protein 1' has the following synonyms
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