Glutamate, maker-scaffold452_size166894-snap-gene-0.40 (gene) Tigriopus kingsejongensis

Overview
NameGlutamate
Unique Namemaker-scaffold452_size166894-snap-gene-0.40
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of Glutamate vs. L. salmonis genes
Match: EMLSAG00000002540 (supercontig:LSalAtl2s:LSalAtl2s14:779805:866751:-1 gene:EMLSAG00000002540 transcript:EMLSAT00000002540 description:"maker-LSalAtl2s14-augustus-gene-9.14")

HSP 1 Score: 158.303 bits (399), Expect = 2.404e-46
Identity = 73/117 (62.39%), Postives = 89/117 (76.07%), Query Frame = 0
Query:    1 LLCHQLANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISE 117
            +LC Q+A+GS+AI YF+NTEKFGRS A+ QYFLQ+AGFLGIPV+AWNADN+G+E                 AP V HQV+ALLSIL RY W QFGIVT++IAGHDDFVQA+RD + +
Sbjct:  200 ILCDQMASGSSAIIYFTNTEKFGRSXASTQYFLQMAGFLGIPVIAWNADNSGLE---------------TLAPSVAHQVSALLSILDRYNWNQFGIVTSDIAGHDDFVQAIRDALHQ 301          
BLAST of Glutamate vs. L. salmonis genes
Match: EMLSAG00000008363 (supercontig:LSalAtl2s:LSalAtl2s50:90431:114559:1 gene:EMLSAG00000008363 transcript:EMLSAT00000008363 description:"maker-LSalAtl2s50-augustus-gene-1.6")

HSP 1 Score: 114.005 bits (284), Expect = 8.068e-31
Identity = 53/123 (43.09%), Postives = 83/123 (67.48%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISEGEYKKR 123
            +C Q LAN +A + Y +N+E +G+ T A+QYF+ +A ++G+P+++WNADN+G E+   S GS+S    LQ AP + HQ  A++++L RY W +  IVT +IAGH +F Q +R+ I E    +R
Sbjct:  117 ICRQFLANKTAVVLYLTNSENYGQDTVASQYFIHLARYVGLPLISWNADNSGFEQ---STGSDSL--RLQLAPTIKHQAXAIITLLERYEWYKILIVTGKIAGHRNFKQVMRELIIETPENQR 234          
BLAST of Glutamate vs. L. salmonis genes
Match: EMLSAG00000005309 (supercontig:LSalAtl2s:LSalAtl2s283:375367:397103:1 gene:EMLSAG00000005309 transcript:EMLSAT00000005309 description:"maker-LSalAtl2s283-snap-gene-4.5")

HSP 1 Score: 85.1149 bits (209), Expect = 6.306e-22
Identity = 34/50 (68.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:   68 HLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISE 117
             LQ AP + HQVAA+LSIL RY W+QF +VT+EIAGHDDF+QAVRD+++E
Sbjct:   77 QLQLAPSLEHQVAAMLSILVRYNWKQFSVVTSEIAGHDDFIQAVRDKVAE 126          
BLAST of Glutamate vs. L. salmonis genes
Match: EMLSAG00000005308 (supercontig:LSalAtl2s:LSalAtl2s283:255404:362599:1 gene:EMLSAG00000005308 transcript:EMLSAT00000005308 description:"maker-LSalAtl2s283-snap-gene-3.9")

HSP 1 Score: 79.337 bits (194), Expect = 9.013e-21
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEK 55
            LC   L    AAI Y +N+E FGRSTA+AQYFLQ+A +LGIPV+AWNADN+G+E+
Sbjct:   55 LCENFLKKKVAAILYLTNSELFGRSTASAQYFLQLASYLGIPVIAWNADNSGLER 109          
BLAST of Glutamate vs. nr
Match: gi|1325330312|ref|XP_023347028.1| (glutamate receptor ionotropic, NMDA 2B-like [Eurytemora affinis])

HSP 1 Score: 159.458 bits (402), Expect = 2.702e-45
Identity = 71/115 (61.74%), Postives = 91/115 (79.13%), Query Frame = 0
Query:    1 LLCHQLANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQI 115
            LLC Q+ N SAAI Y ++TE++GRSTA++QYFLQ+A +LGIPV+AWN DN+G+EK +   G +S    LQ AP + HQV+A+LSIL RY W QFGIVT+EIAGHDDFVQ  R++I
Sbjct:  123 LLCDQIRNSSAAIIYLTDTERYGRSTASSQYFLQLAAYLGIPVIAWNPDNSGLEKRTFQDGQKSIGK-LQLAPTIEHQVSAMLSILVRYNWHQFGIVTSEIAGHDDFVQTFREKI 236          
BLAST of Glutamate vs. nr
Match: gi|1061485625|gb|ODN02749.1| (Glutamate receptor ionotropic, NMDA 2B [Orchesella cincta])

HSP 1 Score: 154.836 bits (390), Expect = 3.876e-41
Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISEGEYK 121
            LC   L +  +AI Y +N EK+  STAA+QYFLQ+AG+LG+PV+AWNADN+G ++ + S    ++   LQ AP +HHQ AA+LSIL RY W QF IVT++IAGHDDFVQAVRD++ E ++K
Sbjct:   64 LCEAFLTSNVSAIIYLTNIEKYTTSTAASQYFLQLAGYLGLPVIAWNADNSGFQRRATSSSDYNSEMVLQMAPAIHHQAAAMLSILTRYNWHQFAIVTSQIAGHDDFVQAVRDKVVESQFK 184          
BLAST of Glutamate vs. nr
Match: gi|307202632|gb|EFN81953.1| (Glutamate [NMDA] receptor subunit epsilon-2, partial [Harpegnathos saltator])

HSP 1 Score: 146.747 bits (369), Expect = 8.686e-40
Identity = 68/117 (58.12%), Postives = 91/117 (77.78%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISE 117
            LC + L+   +AI Y  N EK+GRSTA+AQYFLQ+AG+LGIPV+AWNADN+G+E+ ++      ++  LQ AP + HQ AA+LSIL RY W QF IVT++IAGHDDF+QAVR++IS+
Sbjct:   12 LCKEFLSVNVSAILYLMNYEKYGRSTASAQYFLQLAGYLGIPVIAWNADNSGLERRAS-----QSSLQLQLAPSLEHQTAAMLSILERYKWHQFSIVTSQIAGHDDFIQAVRERISD 123          
BLAST of Glutamate vs. nr
Match: gi|1062681761|ref|XP_017962807.1| (PREDICTED: glutamate receptor ionotropic, NMDA 2B-like [Drosophila navojoa])

HSP 1 Score: 144.05 bits (362), Expect = 1.057e-39
Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISE 117
            LC + L    +AI Y  N E+FG STA+AQYFLQ+AG+LGIPV++WNADN+G+E+      S+ST   LQ AP + HQ AA+LSIL RY W QF +VT++IAGHDDFVQAVR++++E
Sbjct:   14 LCKEFLRVNVSAILYMMNNEQFGHSTASAQYFLQLAGYLGIPVISWNADNSGLERR----ASQSTL-QLQLAPSIEHQSAAMLSILERYKWHQFSVVTSQIAGHDDFVQAVRERVAE 125          
BLAST of Glutamate vs. nr
Match: gi|766939011|ref|XP_011502038.1| (PREDICTED: glutamate receptor ionotropic, NMDA 2B [Ceratosolen solmsi marchali])

HSP 1 Score: 150.214 bits (378), Expect = 1.419e-39
Identity = 69/121 (57.02%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISEGEYK 121
            LC + L+   +AI Y  N E++G STA+AQYFLQ+AG+LGIPV+AWNADN+G+E+ S+      ++ HLQ AP + HQ AA+LSIL RY W QF +VT++IAGHDDFVQAVR++ISE + +
Sbjct:   15 LCKEFLSFNVSAILYLMNNEQYGSSTASAQYFLQLAGYLGIPVIAWNADNSGLERRSSQ-----SSLHLQLAPSIEHQTAAMLSILERYKWHQFSVVTSQIAGHDDFVQAVRERISETQER 130          
BLAST of Glutamate vs. nr
Match: gi|645015487|ref|XP_008206483.1| (PREDICTED: glutamate receptor ionotropic, NMDA 2B-like [Nasonia vitripennis] >gi|1032761352|ref|XP_016840130.1| PREDICTED: glutamate receptor ionotropic, NMDA 2B-like [Nasonia vitripennis])

HSP 1 Score: 149.443 bits (376), Expect = 2.977e-39
Identity = 69/121 (57.02%), Postives = 91/121 (75.21%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISEGEYK 121
            LC + L+   +AI Y  N E++GRSTA+AQYFLQ+AG+LGIPV+AWNADN+G+E+ S          HLQ AP + HQ AA+LSIL RY W QF +VT++IAGHDDFVQAVR+++SE + +
Sbjct:  177 LCKEFLSLNVSAILYLMNYEQYGRSTASAQYFLQLAGYLGIPVIAWNADNSGLERSSL---------HLQLAPSIEHQTAAMLSILERYKWHQFSVVTSQIAGHDDFVQAVRERVSETQER 288          
BLAST of Glutamate vs. nr
Match: gi|1317163897|ref|XP_023245699.1| (glutamate receptor ionotropic, NMDA 2B-like [Copidosoma floridanum])

HSP 1 Score: 149.443 bits (376), Expect = 3.279e-39
Identity = 70/121 (57.85%), Postives = 91/121 (75.21%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISEGEYK 121
            LC + L+   +AI Y  N E++GRSTA+AQYFLQ+AG+LGIPV+AWNADN+G+E+ S          HLQ AP + HQ AA+LSIL RY W QF +VT++IAGHDDFVQAVR++ISE + +
Sbjct:  166 LCKEFLSMNVSAILYLMNYEQYGRSTASAQYFLQLAGYLGIPVIAWNADNSGLERSSL---------HLQLAPSIEHQTAAMLSILERYKWHQFSVVTSQIAGHDDFVQAVRERISETQER 277          
BLAST of Glutamate vs. nr
Match: gi|1321340747|ref|XP_023314662.1| (glutamate receptor ionotropic, NMDA 2A-like isoform X1 [Trichogramma pretiosum])

HSP 1 Score: 149.058 bits (375), Expect = 3.378e-39
Identity = 69/117 (58.97%), Postives = 91/117 (77.78%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISE 117
            LC   L+N  +AI Y  N E++GRSTA+AQYFLQ+AG+LGIPV+AWNADN+G+E+ S+      ++ HLQ AP + HQ AA++SIL RY W QF +VT++IAGH DFVQAVR++ISE
Sbjct:  212 LCKDILSNNVSAILYLLNYEQYGRSTASAQYFLQLAGYLGIPVIAWNADNSGLERRSS-----QSSLHLQLAPSIEHQAAAMMSILERYKWHQFSVVTSQIAGHADFVQAVRERISE 323          
BLAST of Glutamate vs. nr
Match: gi|925674469|gb|KOX71909.1| (Glutamate [NMDA] receptor subunit epsilon-2 [Melipona quadrifasciata])

HSP 1 Score: 147.132 bits (370), Expect = 3.554e-39
Identity = 68/117 (58.12%), Postives = 90/117 (76.92%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISE 117
            LC++ L    +AI Y  N EK+GRSTA+AQYFLQ+AG+LGIPV+AWNADN+G+E+ ++    +     LQ AP + HQ AA+LSIL RY W QF +VT++IAGHDDFVQAVR++IS+
Sbjct:  112 LCNEFLPMNVSAILYLMNYEKYGRSTASAQYFLQLAGYLGIPVIAWNADNSGLERRASQSNLQ-----LQLAPSLEHQTAAMLSILERYKWHQFSVVTSQIAGHDDFVQAVRERISD 223          
BLAST of Glutamate vs. nr
Match: gi|936702997|ref|XP_014229462.1| (glutamate receptor ionotropic, NMDA 2B-like isoform X2 [Trichogramma pretiosum])

HSP 1 Score: 149.058 bits (375), Expect = 4.016e-39
Identity = 69/117 (58.97%), Postives = 91/117 (77.78%), Query Frame = 0
Query:    2 LCHQ-LANGSAAIFYFSNTEKFGRSTAAAQYFLQIAGFLGIPVLAWNADNTGIEKGSASPGSESTANHLQFAPGVHHQVAALLSILARYGWEQFGIVTTEIAGHDDFVQAVRDQISE 117
            LC   L+N  +AI Y  N E++GRSTA+AQYFLQ+AG+LGIPV+AWNADN+G+E+ S+      ++ HLQ AP + HQ AA++SIL RY W QF +VT++IAGH DFVQAVR++ISE
Sbjct:  212 LCKDILSNNVSAILYLLNYEQYGRSTASAQYFLQLAGYLGIPVIAWNADNSGLERRSS-----QSSLHLQLAPSIEHQAAAMMSILERYKWHQFSVVTSQIAGHADFVQAVRERISE 323          
The following BLAST results are available for this feature:
BLAST of Glutamate vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 4
Match NameE-valueIdentityDescription
EMLSAG000000025402.404e-4662.39supercontig:LSalAtl2s:LSalAtl2s14:779805:866751:-1... [more]
EMLSAG000000083638.068e-3143.09supercontig:LSalAtl2s:LSalAtl2s50:90431:114559:1 g... [more]
EMLSAG000000053096.306e-2268.00supercontig:LSalAtl2s:LSalAtl2s283:375367:397103:1... [more]
EMLSAG000000053089.013e-2163.64supercontig:LSalAtl2s:LSalAtl2s283:255404:362599:1... [more]
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BLAST of Glutamate vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Glutamate vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325330312|ref|XP_023347028.1|2.702e-4561.74glutamate receptor ionotropic, NMDA 2B-like [Euryt... [more]
gi|1061485625|gb|ODN02749.1|3.876e-4156.20Glutamate receptor ionotropic, NMDA 2B [Orchesella... [more]
gi|307202632|gb|EFN81953.1|8.686e-4058.12Glutamate [NMDA] receptor subunit epsilon-2, parti... [more]
gi|1062681761|ref|XP_017962807.1|1.057e-3958.12PREDICTED: glutamate receptor ionotropic, NMDA 2B-... [more]
gi|766939011|ref|XP_011502038.1|1.419e-3957.02PREDICTED: glutamate receptor ionotropic, NMDA 2B ... [more]
gi|645015487|ref|XP_008206483.1|2.977e-3957.02PREDICTED: glutamate receptor ionotropic, NMDA 2B-... [more]
gi|1317163897|ref|XP_023245699.1|3.279e-3957.85glutamate receptor ionotropic, NMDA 2B-like [Copid... [more]
gi|1321340747|ref|XP_023314662.1|3.378e-3958.97glutamate receptor ionotropic, NMDA 2A-like isofor... [more]
gi|925674469|gb|KOX71909.1|3.554e-3958.12Glutamate [NMDA] receptor subunit epsilon-2 [Melip... [more]
gi|936702997|ref|XP_014229462.1|4.016e-3958.97glutamate receptor ionotropic, NMDA 2B-like isofor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold452_size166894supercontigscaffold452_size166894:150532..151070 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:membrane
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold452_size166894-snap-gene-0.40-mRNA-1maker-scaffold452_size166894-snap-gene-0.40-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold452_size166894:150532..151070+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold452_size166894-snap-gene-0.40 ID=maker-scaffold452_size166894-snap-gene-0.40|Name=Glutamate|organism=Tigriopus kingsejongensis|type=gene|length=539bp|location=Sequence derived from alignment at scaffold452_size166894:150532..151070+ (Tigriopus kingsejongensis)
ATATCACCGACTTGCTTTGCCACCAATTGGCTAATGGATCGGCCGCCATT TTCTACTTCAGTAACACGGAAAAGTTTGGACGCTCAACGGCGGCTGCGCA ATATTTCTTGCAAATCGCAGGGTTTCTGGGTATTCCTGTTCTGGCATGGA ATGCAGACAACACGGGGATTGAAAAGGTGAACACAACGATTACTCAACCA TCTCCATGCAAAAGGAAGGCCGTTGATTGAATTCCGGTGGTTGGTTTGGG AAAGCCTGCCTTATCTTGTATTACGTTATGTCTAATTATTATGTAGGTAT ACCATTAACCTGCTCTGCATCTATTCTCCTCTCAGGGGAGTGCCAGTCCA GGCTCTGAATCCACCGCCAATCACCTCCAGTTTGCTCCCGGGGTCCACCA CCAGGTGGCTGCATTGCTTTCGATTTTGGCCCGTTACGGCTGGGAACAAT TTGGCATCGTCACCACGGAAATTGCAGGACACGACGACTTTGTCCAGGCC GTCAGAGATCAGATTTCTGAAGGCGAATACAAGAAAAGG
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Synonyms
The feature 'Glutamate' has the following synonyms
Synonym
Tk11707
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