transposon ty3-i gag-pol polyprotein, maker-scaffold537_size144400-snap-gene-0.23 (gene) Tigriopus kingsejongensis

Overview
Nametransposon ty3-i gag-pol polyprotein
Unique Namemaker-scaffold537_size144400-snap-gene-0.23
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of transposon ty3-i gag-pol polyprotein vs. L. salmonis genes
Match: EMLSAG00000009243 (supercontig:LSalAtl2s:LSalAtl2s588:73133:77912:1 gene:EMLSAG00000009243 transcript:EMLSAT00000009243 description:"maker-LSalAtl2s588-augustus-gene-0.13")

HSP 1 Score: 89.3521 bits (220), Expect = 2.320e-19
Identity = 38/90 (42.22%), Postives = 63/90 (70.00%), Query Frame = 0
Query:  313 EVAQNTLKAVRALLAATKTERKKRGKYTKFGLEMRDEIAQYALDHGIESACQEFTARLDYGIHASSVRNYIKIFQTFTSELRAEIGRFVF 402
            E  ++ +  V++LL+ TK+ER +RGKY K+  E+RD IA++AL HG   A + FT +LD  I +S++RN+IK +Q +T +++ EIG++  
Sbjct:  535 ENTESVVSTVKSLLSLTKSERSRRGKYYKYDPEIRDAIAEFALAHGATEASKHFTDKLDLKISSSTIRNFIKSYQAYTPQVKEEIGKYAL 624          
BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Match: gi|1330897506|gb|PNF25300.1| (hypothetical protein B7P43_G11538 [Cryptotermes secundus])

HSP 1 Score: 200.675 bits (509), Expect = 5.023e-53
Identity = 135/421 (32.07%), Postives = 215/421 (51.07%), Query Frame = 0
Query:    7 WKKVECGLFGPFPVVVDGCVVEHRWVMSLLDPFSQWTLAESTVQDSTDVFSALADFLLRQFCLFGFTPTSIVNHSQAIFDLAS-----LLQHLQVRMETCGWSDLGLPASFLSHEPETTSSQSL-------------ATELAQFTGDFPTNWHLLLQSWLFRKRIAPMEGVDQLSPFAIVFQHEPINFEIKDKGQIVMVE--------SRRRMIKNPNLQCRHCDEVFTSRVSFQIHQKYHLEAAKARGKVPGEKEADKPKATPDGESDESDDDDEDSSEEYEAAKDGNRFGRKRKGVFVR-RIDPSARIAKLATSSLAQGIERDQADEVEVTEVAQNTLKAVRALLAATKTERKKRGKYTKFGLEMRDEIAQYALDHGIESACQEFTARLDYGIHASSVRNYIKIFQTFTSELRAEIGRF 400
            W+KVE  L+GP+P  V G    + ++++L DPFS W +A     D  +  S +ADF+ + FC FGF   S++   Q I ++A       +  LQ  + TCG   L +P   L+   +TT    L                L +F    P  W L L  +LF     P  G +  SPF I+F   P+++  +DK    +++        S+RR +++  LQCRHC+EVFTS++SF+IHQ+ H E A+ +G + G++        P G + E            E         ++R+ +F    +D   R+  +A   L    E    D+    E+  NT+ AVR LLA+TK ER++RG+Y K+  E+++E+A+YA++HG     + F+ R+   +  S+VRN +K+++ FT  L+ EIGRF
Sbjct:  133 WQKVELKLYGPYPKTVLG----NEFIITLADPFSHWIVAHPVPGD--NHASHIADFVYKTFCTFGFAKCSVIGVPQEILEIAQCKYKEYVSRLQDTLLTCG---LMVPQ--LTSVCDTTVHNLLVFLHDNLSQCTWVGKLLDEFVETNPHAWDLELARFLFEYCTTP--GRESSSPFTIMFGRSPVSYLEEDKENHNVIDEDKPAETLSKRRRLQSSILQCRHCEEVFTSKISFRIHQRKHTEEARRQGTLEGQE--------PLGPATER-----------EKRLLKRTILKRRQRLFKHGNLDRRERLMTIANQKLHPSQESLPKDKWRA-ELQANTVAAVRKLLASTKEERRRRGRYHKYSAELQEEMARYAMEHGNLETVRHFSQRMGTTVSESTVRNIVKLYRAFTPGLKEEIGRF 520          
BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Match: gi|1339054775|ref|XP_023715801.1| (uncharacterized protein LOC111868919 isoform X3 [Cryptotermes secundus])

HSP 1 Score: 200.675 bits (509), Expect = 6.452e-53
Identity = 135/421 (32.07%), Postives = 215/421 (51.07%), Query Frame = 0
Query:    7 WKKVECGLFGPFPVVVDGCVVEHRWVMSLLDPFSQWTLAESTVQDSTDVFSALADFLLRQFCLFGFTPTSIVNHSQAIFDLAS-----LLQHLQVRMETCGWSDLGLPASFLSHEPETTSSQSL-------------ATELAQFTGDFPTNWHLLLQSWLFRKRIAPMEGVDQLSPFAIVFQHEPINFEIKDKGQIVMVE--------SRRRMIKNPNLQCRHCDEVFTSRVSFQIHQKYHLEAAKARGKVPGEKEADKPKATPDGESDESDDDDEDSSEEYEAAKDGNRFGRKRKGVFVR-RIDPSARIAKLATSSLAQGIERDQADEVEVTEVAQNTLKAVRALLAATKTERKKRGKYTKFGLEMRDEIAQYALDHGIESACQEFTARLDYGIHASSVRNYIKIFQTFTSELRAEIGRF 400
            W+KVE  L+GP+P  V G    + ++++L DPFS W +A     D  +  S +ADF+ + FC FGF   S++   Q I ++A       +  LQ  + TCG   L +P   L+   +TT    L                L +F    P  W L L  +LF     P  G +  SPF I+F   P+++  +DK    +++        S+RR +++  LQCRHC+EVFTS++SF+IHQ+ H E A+ +G + G++        P G + E            E         ++R+ +F    +D   R+  +A   L    E    D+    E+  NT+ AVR LLA+TK ER++RG+Y K+  E+++E+A+YA++HG     + F+ R+   +  S+VRN +K+++ FT  L+ EIGRF
Sbjct:  288 WQKVELKLYGPYPKTVLG----NEFIITLADPFSHWIVAHPVPGD--NHASHIADFVYKTFCTFGFAKCSVIGVPQEILEIAQCKYKEYVSRLQDTLLTCG---LMVPQ--LTSVCDTTVHNLLVFLHDNLSQCTWVGKLLDEFVETNPHAWDLELARFLFEYCTTP--GRESSSPFTIMFGRSPVSYLEEDKENHNVIDEDKPAETLSKRRRLQSSILQCRHCEEVFTSKISFRIHQRKHTEEARRQGTLEGQE--------PLGPATER-----------EKRLLKRTILKRRQRLFKHGNLDRRERLMTIANQKLHPSQESLPKDKWRA-ELQANTVAAVRKLLASTKEERRRRGRYHKYSAELQEEMARYAMEHGNLETVRHFSQRMGTTVSESTVRNIVKLYRAFTPGLKEEIGRF 675          
BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Match: gi|1339054769|ref|XP_023715798.1| (uncharacterized protein LOC111868919 isoform X1 [Cryptotermes secundus] >gi|1339054771|ref|XP_023715799.1| uncharacterized protein LOC111868919 isoform X1 [Cryptotermes secundus] >gi|1330897507|gb|PNF25301.1| hypothetical protein B7P43_G11538 [Cryptotermes secundus])

HSP 1 Score: 200.675 bits (509), Expect = 6.549e-53
Identity = 135/421 (32.07%), Postives = 215/421 (51.07%), Query Frame = 0
Query:    7 WKKVECGLFGPFPVVVDGCVVEHRWVMSLLDPFSQWTLAESTVQDSTDVFSALADFLLRQFCLFGFTPTSIVNHSQAIFDLAS-----LLQHLQVRMETCGWSDLGLPASFLSHEPETTSSQSL-------------ATELAQFTGDFPTNWHLLLQSWLFRKRIAPMEGVDQLSPFAIVFQHEPINFEIKDKGQIVMVE--------SRRRMIKNPNLQCRHCDEVFTSRVSFQIHQKYHLEAAKARGKVPGEKEADKPKATPDGESDESDDDDEDSSEEYEAAKDGNRFGRKRKGVFVR-RIDPSARIAKLATSSLAQGIERDQADEVEVTEVAQNTLKAVRALLAATKTERKKRGKYTKFGLEMRDEIAQYALDHGIESACQEFTARLDYGIHASSVRNYIKIFQTFTSELRAEIGRF 400
            W+KVE  L+GP+P  V G    + ++++L DPFS W +A     D  +  S +ADF+ + FC FGF   S++   Q I ++A       +  LQ  + TCG   L +P   L+   +TT    L                L +F    P  W L L  +LF     P  G +  SPF I+F   P+++  +DK    +++        S+RR +++  LQCRHC+EVFTS++SF+IHQ+ H E A+ +G + G++        P G + E            E         ++R+ +F    +D   R+  +A   L    E    D+    E+  NT+ AVR LLA+TK ER++RG+Y K+  E+++E+A+YA++HG     + F+ R+   +  S+VRN +K+++ FT  L+ EIGRF
Sbjct:  288 WQKVELKLYGPYPKTVLG----NEFIITLADPFSHWIVAHPVPGD--NHASHIADFVYKTFCTFGFAKCSVIGVPQEILEIAQCKYKEYVSRLQDTLLTCG---LMVPQ--LTSVCDTTVHNLLVFLHDNLSQCTWVGKLLDEFVETNPHAWDLELARFLFEYCTTP--GRESSSPFTIMFGRSPVSYLEEDKENHNVIDEDKPAETLSKRRRLQSSILQCRHCEEVFTSKISFRIHQRKHTEEARRQGTLEGQE--------PLGPATER-----------EKRLLKRTILKRRQRLFKHGNLDRRERLMTIANQKLHPSQESLPKDKWRA-ELQANTVAAVRKLLASTKEERRRRGRYHKYSAELQEEMARYAMEHGNLETVRHFSQRMGTTVSESTVRNIVKLYRAFTPGLKEEIGRF 675          
BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Match: gi|1339054773|ref|XP_023715800.1| (uncharacterized protein LOC111868919 isoform X2 [Cryptotermes secundus])

HSP 1 Score: 181.8 bits (460), Expect = 1.797e-46
Identity = 131/420 (31.19%), Postives = 205/420 (48.81%), Query Frame = 0
Query:    7 WKKVECGLFGPFPVVVDGCVVEHRWVMSLLDPFSQWTLAESTVQDSTDVFSALADFLLRQFCLFGFTPTSIVNHSQAIFDLAS-----LLQHLQVRMETCGWSDLGLPASFLSHEPETTSSQSL-------------ATELAQFTGDFPTNWHLLLQSWLFRKRIAPMEGVDQLSPFAIVFQHEPINFEIKDKGQIVMVE--------SRRRMIKNPNLQCRHCDEVFTSRVSFQIHQKYHLEAAKARGKVPGEKEADKPKATPDGESDESDDDDEDSSEEYEAAKDGNRFGRKRKGVFVR-RIDPSARIAKLATSSLAQGIERDQADEVEVTEVAQNTLKAVRALLAATKTERKKRGKYTKFGLEMRDEIAQYALDH-------------GIESACQEFTARLDYGIHASSVRNYIKIF 386
            W+KVE  L+GP+P  V G    + ++++L DPFS W +A     D  +  S +ADF+ + FC FGF   S++   Q I ++A       +  LQ  + TCG   L +P   L+   +TT    L                L +F    P  W L L  +LF     P  G +  SPF I+F   P+++  +DK    +++        S+RR +++  LQCRHC+EVFTS++SF+IHQ+ H E A+ +G + G++        P G + E            E         ++R+ +F    +D   R+  +A   L    E    D+    E+  NT+ AVR LLA+TK ER++RG+Y K+  E+++E+A+YA++H             G+E AC  FT RL   +    VR + K+F
Sbjct:  288 WQKVELKLYGPYPKTVLG----NEFIITLADPFSHWIVAHPVPGD--NHASHIADFVYKTFCTFGFAKCSVIGVPQEILEIAQCKYKEYVSRLQDTLLTCG---LMVPQ--LTSVCDTTVHNLLVFLHDNLSQCTWVGKLLDEFVETNPHAWDLELARFLFEYCTTP--GRESSSPFTIMFGRSPVSYLEEDKENHNVIDEDKPAETLSKRRRLQSSILQCRHCEEVFTSKISFRIHQRKHTEEARRQGTLEGQE--------PLGPATER-----------EKRLLKRTILKRRQRLFKHGNLDRRERLMTIANQKLHPSQESLPKDKWRA-ELQANTVAAVRKLLASTKEERRRRGRYHKYSAELQEEMARYAMEHGLKEEIGRFAARCGVEMACSHFTERLGQEVRRGLVRKFKKLF 674          
BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Match: gi|1330897505|gb|PNF25299.1| (hypothetical protein B7P43_G11538 [Cryptotermes secundus])

HSP 1 Score: 150.214 bits (378), Expect = 1.058e-35
Identity = 93/281 (33.10%), Postives = 151/281 (53.74%), Query Frame = 0
Query:  129 LAQFTGDFPTNWHLLLQSWLFRKRIAPMEGVDQLSPFAIVFQHEPINFEIKDKGQIVMVE--------SRRRMIKNPNLQCRHCDEVFTSRVSFQIHQKYHLEAAKARGKVPGEKEADKPKATPDGESDESDDDDEDSSEEYEAAKDGNRFGRKRKGVFVR-RIDPSARIAKLATSSLAQGIERDQADEVEVTEVAQNTLKAVRALLAATKTERKKRGKYTKFGLEMRDEIAQYALDHGIESACQEFTARLDYGIHASSVRNYIKIFQTFTSELRAEIGRF 400
            L +F    P  W L L  +LF     P  G +  SPF I+F   P+++  +DK    +++        S+RR +++  LQCRHC+EVFTS++SF+IHQ+ H E A+ +G + G++        P G + E            E         ++R+ +F    +D   R+  +A   L    E    D+    E+  NT+ AVR LLA+TK ER++RG+Y K+  E+++E+A+YA++HG     + F+ R+   +  S+VRN +K+++ FT  L+ EIGRF
Sbjct:   34 LDEFVETNPHAWDLELARFLFEYCTTP--GRESSSPFTIMFGRSPVSYLEEDKENHNVIDEDKPAETLSKRRRLQSSILQCRHCEEVFTSKISFRIHQRKHTEEARRQGTLEGQE--------PLGPATER-----------EKRLLKRTILKRRQRLFKHGNLDRRERLMTIANQKLHPSQESLPKDKWRA-ELQANTVAAVRKLLASTKEERRRRGRYHKYSAELQEEMARYAMEHGNLETVRHFSQRMGTTVSESTVRNIVKLYRAFTPGLKEEIGRF 292          
BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Match: gi|1227992351|ref|XP_021927955.1| (uncharacterized protein LOC110833780 isoform X4 [Zootermopsis nevadensis] >gi|1227992353|ref|XP_021927956.1| uncharacterized protein LOC110833780 isoform X4 [Zootermopsis nevadensis])

HSP 1 Score: 125.946 bits (315), Expect = 1.683e-27
Identity = 78/252 (30.95%), Postives = 131/252 (51.98%), Query Frame = 0
Query:    7 WKKVECGLFGPFPVVVDGCVVEHRWVMSLLDPFSQWTLAESTVQDSTDVFSALADFLLRQFCLFGFTPTSIVNHSQAIFDLAS-----LLQHLQVRMETCGWSDLGLPAS----------FLSHEPETTSSQSLATELAQFTGDFPTNWHLLLQSWLFRKRIAPMEGVDQLSPFAIVFQHEPINF--------EIKDKGQIVMVESRRRMIKNPNLQCRHCDEVFTSRVSFQIHQKYHLEAAKARGKVPGEK 235
            W+KVE  L+GP+P  V    +++ +++++ DPFS W +A      S++  + +ADF+ +  C FGF   S++   Q + + A       L  L+  + TCG     L ++          FL HE   +    +   L +F    P +W L L+ +LF        G +  SPF I+F   P++F         + DK +   + S+RR +++  LQCRHC+EVFTS++SF+IHQ+ H E A+ +G + G++
Sbjct:  284 WQKVELKLYGPYPKTV----LQNEFIITIADPFSHWIVAHPV--SSSNHANHIADFVYKTSCTFGFAKCSVIGVPQEVLETAQTKYKEYLSRLRDTLLTCGLMVPQLTSTSGTTIHNLLVFL-HE-NLSQCTWVGKLLDEFVETNPHSWDLELERFLFE--YCTTAGGESSSPFTIMFGRSPVSFLEEDKENHNVMDKEKPTEIVSKRRRLQSSILQCRHCEEVFTSKISFRIHQRKHTEEARRQGMLEGQE 525          
BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Match: gi|1227992349|ref|XP_021927954.1| (uncharacterized protein LOC110833780 isoform X3 [Zootermopsis nevadensis])

HSP 1 Score: 125.946 bits (315), Expect = 1.804e-27
Identity = 78/252 (30.95%), Postives = 131/252 (51.98%), Query Frame = 0
Query:    7 WKKVECGLFGPFPVVVDGCVVEHRWVMSLLDPFSQWTLAESTVQDSTDVFSALADFLLRQFCLFGFTPTSIVNHSQAIFDLAS-----LLQHLQVRMETCGWSDLGLPAS----------FLSHEPETTSSQSLATELAQFTGDFPTNWHLLLQSWLFRKRIAPMEGVDQLSPFAIVFQHEPINF--------EIKDKGQIVMVESRRRMIKNPNLQCRHCDEVFTSRVSFQIHQKYHLEAAKARGKVPGEK 235
            W+KVE  L+GP+P  V    +++ +++++ DPFS W +A      S++  + +ADF+ +  C FGF   S++   Q + + A       L  L+  + TCG     L ++          FL HE   +    +   L +F    P +W L L+ +LF        G +  SPF I+F   P++F         + DK +   + S+RR +++  LQCRHC+EVFTS++SF+IHQ+ H E A+ +G + G++
Sbjct:  302 WQKVELKLYGPYPKTV----LQNEFIITIADPFSHWIVAHPV--SSSNHANHIADFVYKTSCTFGFAKCSVIGVPQEVLETAQTKYKEYLSRLRDTLLTCGLMVPQLTSTSGTTIHNLLVFL-HE-NLSQCTWVGKLLDEFVETNPHSWDLELERFLFE--YCTTAGGESSSPFTIMFGRSPVSFLEEDKENHNVMDKEKPTEIVSKRRRLQSSILQCRHCEEVFTSKISFRIHQRKHTEEARRQGMLEGQE 543          
BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Match: gi|1227992347|ref|XP_021927953.1| (uncharacterized protein LOC110833780 isoform X2 [Zootermopsis nevadensis])

HSP 1 Score: 125.946 bits (315), Expect = 1.891e-27
Identity = 78/252 (30.95%), Postives = 131/252 (51.98%), Query Frame = 0
Query:    7 WKKVECGLFGPFPVVVDGCVVEHRWVMSLLDPFSQWTLAESTVQDSTDVFSALADFLLRQFCLFGFTPTSIVNHSQAIFDLAS-----LLQHLQVRMETCGWSDLGLPAS----------FLSHEPETTSSQSLATELAQFTGDFPTNWHLLLQSWLFRKRIAPMEGVDQLSPFAIVFQHEPINF--------EIKDKGQIVMVESRRRMIKNPNLQCRHCDEVFTSRVSFQIHQKYHLEAAKARGKVPGEK 235
            W+KVE  L+GP+P  V    +++ +++++ DPFS W +A      S++  + +ADF+ +  C FGF   S++   Q + + A       L  L+  + TCG     L ++          FL HE   +    +   L +F    P +W L L+ +LF        G +  SPF I+F   P++F         + DK +   + S+RR +++  LQCRHC+EVFTS++SF+IHQ+ H E A+ +G + G++
Sbjct:  303 WQKVELKLYGPYPKTV----LQNEFIITIADPFSHWIVAHPV--SSSNHANHIADFVYKTSCTFGFAKCSVIGVPQEVLETAQTKYKEYLSRLRDTLLTCGLMVPQLTSTSGTTIHNLLVFL-HE-NLSQCTWVGKLLDEFVETNPHSWDLELERFLFE--YCTTAGGESSSPFTIMFGRSPVSFLEEDKENHNVMDKEKPTEIVSKRRRLQSSILQCRHCEEVFTSKISFRIHQRKHTEEARRQGMLEGQE 544          
BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Match: gi|1227992343|ref|XP_021927951.1| (uncharacterized protein LOC110833780 isoform X1 [Zootermopsis nevadensis] >gi|1227992345|ref|XP_021927952.1| uncharacterized protein LOC110833780 isoform X1 [Zootermopsis nevadensis])

HSP 1 Score: 125.561 bits (314), Expect = 1.965e-27
Identity = 78/252 (30.95%), Postives = 131/252 (51.98%), Query Frame = 0
Query:    7 WKKVECGLFGPFPVVVDGCVVEHRWVMSLLDPFSQWTLAESTVQDSTDVFSALADFLLRQFCLFGFTPTSIVNHSQAIFDLAS-----LLQHLQVRMETCGWSDLGLPAS----------FLSHEPETTSSQSLATELAQFTGDFPTNWHLLLQSWLFRKRIAPMEGVDQLSPFAIVFQHEPINF--------EIKDKGQIVMVESRRRMIKNPNLQCRHCDEVFTSRVSFQIHQKYHLEAAKARGKVPGEK 235
            W+KVE  L+GP+P  V    +++ +++++ DPFS W +A      S++  + +ADF+ +  C FGF   S++   Q + + A       L  L+  + TCG     L ++          FL HE   +    +   L +F    P +W L L+ +LF        G +  SPF I+F   P++F         + DK +   + S+RR +++  LQCRHC+EVFTS++SF+IHQ+ H E A+ +G + G++
Sbjct:  308 WQKVELKLYGPYPKTV----LQNEFIITIADPFSHWIVAHPV--SSSNHANHIADFVYKTSCTFGFAKCSVIGVPQEVLETAQTKYKEYLSRLRDTLLTCGLMVPQLTSTSGTTIHNLLVFL-HE-NLSQCTWVGKLLDEFVETNPHSWDLELERFLFE--YCTTAGGESSSPFTIMFGRSPVSFLEEDKENHNVMDKEKPTEIVSKRRRLQSSILQCRHCEEVFTSKISFRIHQRKHTEEARRQGMLEGQE 549          
BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Match: gi|1330926847|gb|PNF39865.1| (hypothetical protein B7P43_G01958 [Cryptotermes secundus])

HSP 1 Score: 119.013 bits (297), Expect = 2.313e-25
Identity = 77/246 (31.30%), Postives = 119/246 (48.37%), Query Frame = 0
Query:    7 WKKVECGLFGPFPVVVDGCVVEHRWVMSLLDPFSQWTLAESTVQDSTDVFSALADFLLRQFCLFGFTPTSIVNHSQAIFDLASL-----LQHLQVRMETCGW------SDLGLPASFLSHEPETTSSQS--LATELAQFTGDFPTNWHLLLQSWLFRKRIAPMEGVDQLSPFAIVFQHEPI--------NFEIKDKGQIVMVESRRRMIKNPNLQCRHCDEVFTSRVSFQIHQKYHLEAAKARGKV 231
            W+KVE  L+GP+P  V    +++ +++++ DPFS W +A     ++      +A FL + FC FGF   S V   Q I + A       +  LQ    TCG       S  G     L    +   SQ   +   L +F    P  W L L+ +LF+       G +  SPF I+F   P+        N  + D+G+   +  +RR +++  LQCRHC+EVFTS++SF+IHQ+ H E    +G +
Sbjct:  112 WQKVELKLYGPYPKTV----LKNEFIITIADPFSHWVVARPVPGNNHACH--IAHFLYKTFCTFGFAKCSFVGVPQEILETAQCKYKEYVSRLQDAFLTCGLMEPQLTSVCGTTVHSLPFFLQENLSQCTWVGKFLDEFVETSPHAWDLELERFLFQ--YCTTVGRESSSPFTIMFGRNPVSYLEKDKENHNVTDEGKPAEILCKRRRLQSSLLQCRHCEEVFTSKISFRIHQRKHTEEVHCQGTL 349          
The following BLAST results are available for this feature:
BLAST of transposon ty3-i gag-pol polyprotein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000092432.320e-1942.22supercontig:LSalAtl2s:LSalAtl2s588:73133:77912:1 g... [more]
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BLAST of transposon ty3-i gag-pol polyprotein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of transposon ty3-i gag-pol polyprotein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 23
Match NameE-valueIdentityDescription
gi|1330897506|gb|PNF25300.1|5.023e-5332.07hypothetical protein B7P43_G11538 [Cryptotermes se... [more]
gi|1339054775|ref|XP_023715801.1|6.452e-5332.07uncharacterized protein LOC111868919 isoform X3 [C... [more]
gi|1339054769|ref|XP_023715798.1|6.549e-5332.07uncharacterized protein LOC111868919 isoform X1 [C... [more]
gi|1339054773|ref|XP_023715800.1|1.797e-4631.19uncharacterized protein LOC111868919 isoform X2 [C... [more]
gi|1330897505|gb|PNF25299.1|1.058e-3533.10hypothetical protein B7P43_G11538 [Cryptotermes se... [more]
gi|1227992351|ref|XP_021927955.1|1.683e-2730.95uncharacterized protein LOC110833780 isoform X4 [Z... [more]
gi|1227992349|ref|XP_021927954.1|1.804e-2730.95uncharacterized protein LOC110833780 isoform X3 [Z... [more]
gi|1227992347|ref|XP_021927953.1|1.891e-2730.95uncharacterized protein LOC110833780 isoform X2 [Z... [more]
gi|1227992343|ref|XP_021927951.1|1.965e-2730.95uncharacterized protein LOC110833780 isoform X1 [Z... [more]
gi|1330926847|gb|PNF39865.1|2.313e-2531.30hypothetical protein B7P43_G01958 [Cryptotermes se... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold537_size144400supercontigscaffold537_size144400:84745..88461 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold537_size144400-snap-gene-0.23-mRNA-1maker-scaffold537_size144400-snap-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold537_size144400:84745..88461+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold537_size144400-snap-gene-0.23 ID=maker-scaffold537_size144400-snap-gene-0.23|Name=transposon ty3-i gag-pol polyprotein|organism=Tigriopus kingsejongensis|type=gene|length=3717bp|location=Sequence derived from alignment at scaffold537_size144400:84745..88461+ (Tigriopus kingsejongensis)
GCAAGATTTATGGCGACAGCCGCTTAAAGAAACCAGACAGAATTCCTCCC CTCGGCGAGTCGTGGTGACCCACTCGGGGCGAGCTCTTTCTCCCCTCATT GCGCCCCAACTTGGAAAAGGGGTCGATCGAGGCGGAGGAGGGCAGAATCG GATGGGATAAAAGCGCCTCACTCCATTGGCCAATCATGCTTGGGCAGTCC CAGATCGTTGGCTTGAAGGCTCACTAGACGAGCGAGTGGAGCCAGCAAGG CCACAAAGGCCACCATGGGATCCCTGTCGACCTGGAAGAAGGTGAGTGCT GACCACCACGCCCCCGGCTGGCTCGATGCCCTTCGATCCCAGCCTGACGA ATACCATTGTGGACTGGCCAACTTGGGAGGATGGACTCAACTGCGTCCAG ACCGGTTTGGTCGTCGACTAGGCGAGCCTAACCTAACCTAGCTTATTTAG GCCATGCATGAATGACCAAGGCTAGTGTTCCGGGGTAAAGGTAGGCCATG GCAGTGGCGTCAAAACAGTTCTGACATCAAACCTGATCTAACCTAACCCT AACTGTATGACAACTACGCTTGAGTGATCCTAGTCCCAGGTCTAATCTAG GTAAGCTAGATTCGAGTTTAGCTACACGCGGGTCTAATCTAGGTAAACTG CGCTCGAGTGATCCTAGTCGCAGGTCTAATCTAGGTAAGCTACATTCGAG TTTAGCTACACGCAGCGCTAATCTAAGTAAACCATGCTCGAGTAACCTTA GCGCTAGTCTAGGTAAGCGACACTCGAGTTACCCTAGTCCCAGGTCTAAT CTAGGTAAGCTACACTCGAGTTTAGCTACACGCGGGTCTAATCTAGGTAA ACTGCGCTCGAGTGATCCTAGTCGCAGGTCTAATCTAGGTAAGCTAGATT CGAGTTTAGCTACACGCAGCGCTAATCTAAGTAAACTGCGCTCGAGTGAT CCTAGTCGCAGGTCTAATCTAGGTAAGCTACATTCGAGTTTAGCTACACG CAGCGCTAATCTAAGTAAACCATGCTCGAGTAACCTTGGCGCTAGTCTAG GTAAGCGACACTCGAGTTACCCTAGTCCCAGGTCTAATCTAGGTAAGCTA CACTCGAGTTTTGCTACACGCAGGTCTAATCTAGGTAAACTGCGCTCGAG TGATCCTAGTCGCAGGTCTAATCTAGGTAAGCTACATTCGAGTTTAGCTA CACGCAGCGCTAATCTAAGTAAACTATACTCGAGTTACCCTAGCCCCAGC GCTAATCGAGGTAAGCTACATTCGAGTTTTGCTGAGCTGATCCTCTTGGG GACACATCACCCAGCCCACCCACATCAGGAGTTCAAAAACGAATGGATCC ACGAAGAGAAATTAAGGGGCTGGTGATTCCTGAAGGTTTTCCTGATCTGA AATCCTGCTTAGCGACAACCTCAACGAACATCAGAATAAACACAGTCAAC CACAAGACTATTCTGATCCGATCGAACAATGGCAGACAGATGAATTAGCA TCTGGATCCAAACGGAAACCCGACCAAAGCAGCCCTCAAACTGTCATTGT AAAAAAGAAGAAAGGTTTCATGGGTGAAGACTCCGGAGCAATAACCCGTG CCCGATCTTCATCCCATCCCTCAGTTAAGCCTCGCAAAAAACTTGCAGGC TGAAAGTCAACCCTCACCCGATCTGTCTGAACTGAATTTGAATGAAGTCC CTTTTGTCCATATTTTAGATCATTTTTTTATCTTTTTTTATTTATCTACG CCTGCACAAACTTTAGCTCAGGCAATATTTGGTGTTTTCCGCCAAACTTA TCAATAACTCTCTTGATTCGTGTTCTTTTCTTCCTTCAATTTTTGGGGCT CAGTGAAAACAAACAATCCTGCTTATCTGCGCCCCTTTGGCATAACATAC ATCCTCAAGTTGTTTATTTACGTTTTCAATTATGATGTAGAGTTCTGCCA AGAAATTAATAAATGCTAAAAATGCTAGCTACACGCAGCGCTAATCTATG TGAACTACGCTCGAATTGCCGTAGCCGCCATCCCCTACCTTAACCTCTTC GGGTGGGTGAACTCATGCTGACATGTGGTAATTAAGTAGACTCTTGGCTT TGGGGGCCTCATCTCATTGCTTGGCCTTGGTGGCCAACATTGGCCTCGTC TCGTTGTATTATGACTGGCATTGGTCCCTGGTTTTATTTGTGAAAACAAA TCATGCTATTCCCAATGCAATTGGGCCCAACTAGAAGTTTGGATAAACAA TCGAGGATTTCTAAGGAGTTTTGTGCTGGAAATCCATGTATTCTACCACT AAAACCATCATGGCAGCCGTTCACCCGGGATGGGAACCTAACAGATGCAG ATCGGTAGTGATGAAGCATCGTAAAATATGTCGACACTTTCACTTGTCTC GCCTTTTTTCACTGCGTTGCCATGGATCATTTGGGGTTTTCATATGGGGT TTGAAGGAGCTTTTCTTCTAGACTTGAGGCCGTGATACTGTAAAATGTCA AGTGATGGCCAATTTTGGACGCGTTTCAGGTGGAATGCGGGCTGTTTGGA CCGTTTCCCGTGGTGGTGGACGGGTGTGTGGTGGAGCATCGTTGGGTCAT GAGCCTCTTGGATCCGTTCTCCCAGTGGACCCTGGCCGAATCTACCGTCC AAGACTCGACGGACGTGTTCTCGGCCTTGGCCGATTTTCTCCTGCGTCAG TTCTGTCTCTTTGGTTTCACGCCCACGTCGATTGTGAACCATTCTCAGGC CATTTTTGACCTGGCCTCGCTCCTCCAGCACCTTCAGGTGCGGATGGAGA CGTGCGGCTGGTCGGATTTGGGCCTGCCGGCCTCGTTTCTCAGCCACGAG CCGGAAACGACCTCTTCGCAGAGCCTGGCCACCGAGCTGGCCCAGTTCAC GGGGGATTTCCCCACCAATTGGCATCTCCTGCTCCAGTCCTGGCTCTTCC GGAAGCGGATTGCCCCAATGGAGGGCGTAGATCAGCTCTCGCCCTTCGCC ATCGTGTTCCAGCACGAGCCCATCAACTTCGAGATCAAGGACAAGGGCCA GATCGTCATGGTCGAGAGCCGGCGGAGGATGATCAAGAATCCCAATCTCC AGTGTCGACACTGCGACGAGGTGTTCACGTCCCGGGTCAGTTTTCAGATC CATCAGAAGTACCACCTCGAAGCGGCCAAGGCCCGGGGCAAAGTCCCGGG CGAGAAAGAGGCAGATAAGCCCAAGGCCACGCCTGATGGTGAGAGCGACG AGTCCGACGATGACGACGAGGACTCGTCCGAAGAGTACGAGGCGGCCAAG GACGGGAATCGCTTTGGTCGCAAACGTAAGGGCGTGTTTGTGCGGCGAAT CGATCCCTCAGCCCGCATAGCTAAGCTGGCCACCTCCAGCCTCGCTCAAG GGATCGAACGCGATCAGGCCGACGAGGTGGAAGTCACGGAAGTGGCCCAG AACACCCTCAAGGCCGTGAGGGCCCTTCTGGCGGCCACCAAGACCGAGCG GAAGAAGCGGGGCAAGTACACCAAGTTTGGCTTGGAAATGCGCGATGAAA TCGCGCAGTATGCCTTGGACCACGGGATAGAGAGCGCCTGCCAGGAGTTC ACGGCTCGCTTGGACTATGGTATTCACGCCTCGAGCGTCAGGAATTACAT CAAGATCTTCCAAACGTTCACATCCGAGCTCAGGGCCGAGATTGGGCGCT TTGTCTTCTCGATTTGA
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Synonyms
The feature 'transposon ty3-i gag-pol polyprotein' has the following synonyms
Synonym
Tk08654
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