synaptobrevin , maker-scaffold546_size140615-snap-gene-0.36 (gene) Tigriopus kingsejongensis

Overview
Namesynaptobrevin
Unique Namemaker-scaffold546_size140615-snap-gene-0.36
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of synaptobrevin vs. L. salmonis genes
Match: EMLSAG00000009514 (supercontig:LSalAtl2s:LSalAtl2s612:212145:215065:1 gene:EMLSAG00000009514 transcript:EMLSAT00000009514 description:"augustus_masked-LSalAtl2s612-processed-gene-2.1")

HSP 1 Score: 174.866 bits (442), Expect = 6.935e-57
Identity = 80/108 (74.07%), Postives = 94/108 (87.04%), Query Frame = 0 
Query:   19 RPLGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFF 126
            RPLGPDGKP+PGP+QM+Q+ A R+MGQQQAQVDEV  IM  N+E+VLERD+KL  L+ERADALQDG +QFEKQA  +KNKFWL+NLKSMI MG VG+ILL L+YWKFF
Sbjct:   14 RPLGPDGKPIPGPEQMRQIQAARKMGQQQAQVDEVINIMHTNVEQVLERDSKLGALEERADALQDGCAQFEKQAAAMKNKFWLENLKSMIAMGVVGVILLGLLYWKFF 121
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BLAST of synaptobrevin vs. L. salmonis genes
Match: EMLSAG00000009513 (supercontig:LSalAtl2s:LSalAtl2s612:211386:211874:1 gene:EMLSAG00000009513 transcript:EMLSAT00000009513 description:"augustus_masked-LSalAtl2s612-processed-gene-2.0")

HSP 1 Score: 148.673 bits (374), Expect = 1.053e-46
Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 0 
Query:    9 SQPTPSADGGRPLGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKF 125
            S P  +A  GRPLGPDGKPLPGPQQMQQVMA RRM QQQAQVDEV GIM++N+EKVL+RDAKL+ELDERADALQDGASQFEKQAGKLKNKFWLQN+K +I  G VGLILL+L+Y+KF
Sbjct:    5 SNPPATAPDGRPLGPDGKPLPGPQQMQQVMAQRRMAQQQAQVDEVVGIMRNNVEKVLDRDAKLSELDERADALQDGASQFEKQAGKLKNKFWLQNMKFLIAGGIVGLILLILLYFKF 121
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BLAST of synaptobrevin vs. L. salmonis genes
Match: EMLSAG00000000407 (supercontig:LSalAtl2s:LSalAtl2s1064:131354:159067:1 gene:EMLSAG00000000407 transcript:EMLSAT00000000407 description:"snap_masked-LSalAtl2s1064-processed-gene-1.2")

HSP 1 Score: 107.457 bits (267), Expect = 3.311e-29
Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 0 
Query:   31 PQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIY 122
            PQ +QQ++A +R+ Q QAQV EV  IM+ N+EKVLERD+KL+ELD RAD LQ+GASQF++QA KLK K W +N K  I++G + L  + +I 
Sbjct:   83 PQNIQQLVASKRLQQAQAQVGEVVDIMRINVEKVLERDSKLSELDRRADDLQEGASQFQQQAVKLKRKLWWENAKMWIILGVLLLFFIAVIV 174
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BLAST of synaptobrevin vs. L. salmonis genes
Match: EMLSAG00000010393 (supercontig:LSalAtl2s:LSalAtl2s68:1408979:1409257:-1 gene:EMLSAG00000010393 transcript:EMLSAT00000010393 description:"augustus_masked-LSalAtl2s68-processed-gene-14.0")

HSP 1 Score: 67.781 bits (164), Expect = 6.375e-16
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 0 
Query:   49 QVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNK-FWLQNLK 105
            QVDEV  IMK N+EK+LERD KL +L+ERAD LQ+G  QF + A ++K K FW QN+K
Sbjct:   14 QVDEVQNIMKGNVEKMLERDGKLGQLEERADRLQEGTEQFHRSAVRIKRKQFW-QNMK 70
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BLAST of synaptobrevin vs. L. salmonis genes
Match: EMLSAG00000007095 (supercontig:LSalAtl2s:LSalAtl2s3:880430:881669:1 gene:EMLSAG00000007095 transcript:EMLSAT00000007095 description:"maker-LSalAtl2s3-augustus-gene-8.30")

HSP 1 Score: 65.855 bits (159), Expect = 7.807e-15
Identity = 28/65 (43.08%), Postives = 46/65 (70.77%), Query Frame = 0 
Query:   47 QAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMG 111
            Q QVDEV  IM++N+ KV++RD KL +LD+RA  L+  ++ F   + +L+ K+W +NLK  +++G
Sbjct:   19 QNQVDEVVTIMRENVNKVIQRDEKLGDLDDRAANLEANSNSFAASSVRLRRKYWWENLKMKLIIG 83
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BLAST of synaptobrevin vs. SwissProt
Match: gi|81175197|sp|P18489.3|SYB_DROME (RecName: Full=Synaptobrevin)

HSP 1 Score: 105.916 bits (263), Expect = 1.491e-28
Identity = 49/83 (59.04%), Postives = 67/83 (80.72%), Query Frame = 0 
Query:   39 AGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLI 121
            A +++ Q QA+VDEV GIM+ N+EKVLERD KL+EL ERAD L+ GASQFE+QAGKLK K W  N+K MI++G + ++LL+++
Sbjct:   44 AQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWANMKMMIILGVIAVVLLIIV 126
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BLAST of synaptobrevin vs. SwissProt
Match: gi|135096|sp|P13701.1|SYB_TORCA (RecName: Full=Synaptobrevin; AltName: Full=Synaptic vesicle-associated integral membrane protein; AltName: Full=VAMP-1)

HSP 1 Score: 104.76 bits (260), Expect = 1.496e-28
Identity = 57/104 (54.81%), Postives = 69/104 (66.35%), Query Frame = 0 
Query:    7 PTSQPTPSADGGRPLGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMM 110
            P S P P A GG P  P G P   P       + RR+ Q QAQV+EV  I++ N++KVLERD KL+ELD+RADALQ GASQFE  A KLK K+W +N K MIM+
Sbjct:    4 PPSGPAPDAQGGAPGQPTGPPGAPPN----TTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIML 103
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BLAST of synaptobrevin vs. SwissProt
Match: gi|6094391|sp|P47193.3|VAMP2_XENLA (RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=SYBII; AltName: Full=Synaptobrevin-2)

HSP 1 Score: 103.605 bits (257), Expect = 3.988e-28
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 0 
Query:   39 AGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGA 112
            + RR+ Q QAQVDEV  IM+ N++KVLERD KL+ELD+RADALQ GASQFE  A KLK K+W +N+K MI+MG 
Sbjct:   26 SNRRLQQTQAQVDEVVDIMRVNVDKVLERDTKLSELDDRADALQAGASQFETSAAKLKRKYWWKNMKMMIIMGV 99
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BLAST of synaptobrevin vs. SwissProt
Match: gi|51704191|sp|P63026.2|VAMP2_BOVIN (RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2)

HSP 1 Score: 102.834 bits (255), Expect = 9.431e-28
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 0 
Query:   39 AGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGA 112
            + RR+ Q QAQVDEV  IM+ N++KVLERD KL+ELD+RADALQ GASQFE  A KLK K+W +NLK MI++G 
Sbjct:   28 SNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMIILGV 101
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BLAST of synaptobrevin vs. SwissProt
Match: gi|74956515|sp|O02495.1|SYB1_CAEEL (RecName: Full=Synaptobrevin-1; AltName: Full=Synaptobrevin-related protein 1)

HSP 1 Score: 102.449 bits (254), Expect = 9.602e-28
Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = 0 
Query:   39 AGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGA 112
            + +R+ Q QAQVDEV GIMK N+EKVLERD KL++LD+RADALQ+GASQFEK A  LK K+W +N+K MI+M A
Sbjct:   20 SNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWKNIKMMIIMCA 93
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BLAST of synaptobrevin vs. SwissProt
Match: gi|51704188|sp|P63045.2|VAMP2_RAT (RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2 >gi|51704193|sp|P63044.2|VAMP2_MOUSE RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2)

HSP 1 Score: 102.834 bits (255), Expect = 9.638e-28
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 0 
Query:   39 AGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGA 112
            + RR+ Q QAQVDEV  IM+ N++KVLERD KL+ELD+RADALQ GASQFE  A KLK K+W +NLK MI++G 
Sbjct:   28 SNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMIILGV 101
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BLAST of synaptobrevin vs. SwissProt
Match: gi|83288286|sp|Q9N0Y0.3|VAMP2_MACMU (RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2 >gi|288558837|sp|P63027.3|VAMP2_HUMAN RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2)

HSP 1 Score: 102.834 bits (255), Expect = 9.638e-28
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 0 
Query:   39 AGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGA 112
            + RR+ Q QAQVDEV  IM+ N++KVLERD KL+ELD+RADALQ GASQFE  A KLK K+W +NLK MI++G 
Sbjct:   28 SNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMIILGV 101
[Close]
BLAST of synaptobrevin vs. SwissProt
Match: gi|160332380|sp|Q0V7N0.2|VAMP1_BOVIN (RecName: Full=Vesicle-associated membrane protein 1; Short=VAMP-1; AltName: Full=Synaptobrevin-1)

HSP 1 Score: 102.834 bits (255), Expect = 1.043e-27
Identity = 53/89 (59.55%), Postives = 69/89 (77.53%), Query Frame = 0 
Query:   39 AGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFFA 127
            + RR+ Q QAQV+EV  IM+ N++KVLERD KL+ELD+RADALQ GASQFE  A KLK K+W +N K MIM+GA+  I++++I   FFA
Sbjct:   30 SNRRLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIMLGAICAIIVVVIVIYFFA 118
[Close]
BLAST of synaptobrevin vs. SwissProt
Match: gi|2842651|sp|Q62442.1|VAMP1_MOUSE (RecName: Full=Vesicle-associated membrane protein 1; Short=VAMP-1; AltName: Full=Synaptobrevin-1)

HSP 1 Score: 102.064 bits (253), Expect = 1.718e-27
Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = 0 
Query:   39 AGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAV 113
            + RR+ Q QAQV+EV  IM+ N++KVLERD KL+ELD+RADALQ GASQFE  A KLK K+W +N K MIM+GA+
Sbjct:   30 SNRRLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIMLGAI 104
[Close]
BLAST of synaptobrevin vs. SwissProt
Match: gi|74846112|sp|Q60WU2.1|SYB1_CAEBR (RecName: Full=Synaptobrevin-1; AltName: Full=Synaptobrevin-related protein 1)

HSP 1 Score: 101.679 bits (252), Expect = 1.891e-27
Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = 0 
Query:   39 AGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGA 112
            + +R+ Q QAQVDEV GIMK N+EKVLERD KL++LD+RADALQ+GASQFEK A  LK K+W +N+K MI+M A
Sbjct:   19 SNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWKNIKMMIIMCA 92
[Close]
BLAST of synaptobrevin vs. nr
Match: gi|1325323544|ref|XP_023343610.1| (vesicle-associated membrane protein 2-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 187.193 bits (474), Expect = 7.094e-58
Identity = 90/128 (70.31%), Postives = 108/128 (84.38%), Query Frame = 0 
Query:    1 MSDKQPPTSQPTPSADGGRPLGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFFAS 128
            M+D +   ++PT   DG RPLGPDGKPLPGP QMQQ+MA +RM QQQAQVDEV GIM++N+EKVLERD KLNELDE+ADALQDGASQFEK AGKLKNKFW++N+K +++ G  G+ILL LIYW +FAS
Sbjct:    1 MADVEKGENKPTVGPDG-RPLGPDGKPLPGPAQMQQIMAQKRMAQQQAQVDEVVGIMRNNVEKVLERDQKLNELDEKADALQDGASQFEKSAGKLKNKFWMENMKMIVIGGIAGVILLGLIYWNYFAS 127
[Close]
BLAST of synaptobrevin vs. nr
Match: gi|1325323540|ref|XP_023343608.1| (synaptobrevin-1-like isoform X1 [Eurytemora affinis] >gi|1325323542|ref|XP_023343609.1| synaptobrevin-1-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 157.532 bits (397), Expect = 4.308e-46
Identity = 72/108 (66.67%), Postives = 89/108 (82.41%), Query Frame = 0 
Query:   19 RPLGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFF 126
            RPLGPDGKP+PGP +++Q+ A R+M QQQAQV+EV GIM  N+E VL+RD KL +L+ERADALQDG +QFEKQA  +KNKFWL+NLKS+I    VG I+L L+YWKFF
Sbjct:   16 RPLGPDGKPIPGPAEVRQIQAARKMAQQQAQVEEVIGIMHKNVENVLDRDRKLGDLEERADALQDGCAQFEKQAAAMKNKFWLENLKSIIAGCVVGAIVLGLLYWKFF 123
[Close]
BLAST of synaptobrevin vs. nr
Match: gi|1339081651|ref|XP_023701835.1| (synaptobrevin-1 [Cryptotermes secundus] >gi|1330926432|gb|PNF39470.1| Synaptobrevin [Cryptotermes secundus])

HSP 1 Score: 152.14 bits (383), Expect = 4.817e-44
Identity = 80/130 (61.54%), Postives = 95/130 (73.08%), Query Frame = 0 
Query:   17 GGRPLGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFFASDQPSH-PQYYYPPPQQPA 145
            GG   G DG  + GP+  QQ+ A +R+ Q QAQVDEV GIMK N+EKVLERD KL+ELD+RADALQ GASQFE+QAGKLK KFWLQNLK MI+MG +GL++L +I  KF     P+  P  YY   QQPA
Sbjct:   14 GGLQPGEDGGIVGGPRTPQQIAAQKRLQQTQAQVDEVVGIMKTNVEKVLERDQKLSELDDRADALQHGASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVILAIIVVKFMPESNPTSPPSVYY--QQQPA 141
[Close]
BLAST of synaptobrevin vs. nr
Match: gi|242023558|ref|XP_002432199.1| (synaptobrevin, putative [Pediculus humanus corporis] >gi|212517596|gb|EEB19461.1| synaptobrevin, putative [Pediculus humanus corporis])

HSP 1 Score: 147.132 bits (370), Expect = 1.987e-42
Identity = 75/122 (61.48%), Postives = 92/122 (75.41%), Query Frame = 0 
Query:    7 PTSQPTPSADGGRP------LGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIY 122
            P+   T S  GG P      +GPDG+P+ GP+  QQ+ A +R+ Q QAQVDEV  IMK N+EKVLERD KL+ELD+RADALQ GASQFE+QAGKLK KFWLQNLK MI+MG +GL++L +I 
Sbjct:    4 PSVVATESGPGGHPGALQPQVGPDGEPIGGPRTPQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVILAIII 125
[Close]
BLAST of synaptobrevin vs. nr
Match: gi|924558729|gb|ALC43741.1| (n-syb, partial [Drosophila busckii])

HSP 1 Score: 147.517 bits (371), Expect = 5.669e-42
Identity = 82/157 (52.23%), Postives = 104/157 (66.24%), Query Frame = 0 
Query:    6 PPTSQPTPSADGGRPLGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFFASDQPSHPQYYYPPPQQPAPPSPQSPDQSVHETADE 162
            PPT  P P+ +GG     DG+ + GP+  QQ+ A +R+ Q QAQVDEV  IM+ N+EKVLERDAKL+ELD+RADALQ GASQFE+QAGKLK KFWLQNLK MI+MG +GL+++ +I   F + D  + P          AP S  +P Q  H    E
Sbjct:   11 PPTDGP-PAGEGG-----DGEIVGGPRNPQQIAAQKRLQQTQAQVDEVVDIMRTNVEKVLERDAKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVIVGIIAKPFMSDDAAASPPPALQQVHVSAPESVSAPPQHHHTLKSE 161
[Close]
BLAST of synaptobrevin vs. nr
Match: gi|1227958012|ref|XP_021924581.1| (vesicle-associated membrane protein 2 [Zootermopsis nevadensis])

HSP 1 Score: 144.821 bits (364), Expect = 3.146e-41
Identity = 77/136 (56.62%), Postives = 92/136 (67.65%), Query Frame = 0 
Query:   22 GPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFFASDQP-SHPQYYYP---PPQQPAPPSPQSPD 153
            G DG    GP+  QQ+ A +R+ Q QAQVDEV  IMK N+EKVLERD KL+ELD+RADALQ GASQFE+QAGKLK KFWLQNLK MI+MG +GL++L +I  KF     P S P   Y    P      P+P + D
Sbjct:   15 GEDGAVAGGPRTPQQIAAQKRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVILAIIVVKFMPESSPASQPSQNYQQLLPAHAVTAPAPSAVD 150
[Close]
BLAST of synaptobrevin vs. nr
Match: gi|769858756|ref|XP_011641067.1| (PREDICTED: vesicle-associated membrane protein 2 isoform X2 [Pogonomyrmex barbatus])

HSP 1 Score: 144.436 bits (363), Expect = 1.025e-40
Identity = 75/129 (58.14%), Postives = 90/129 (69.77%), Query Frame = 0 
Query:   30 GPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFFASDQPSHPQYYYPPPQQPAP-----PSPQSPD 153
            GP+  QQ+ + +R+   QAQVDEV  IMK N+EKVLERD KL+ELD+RADALQ GASQFE+QAGKLK KFWLQNLK MI+MG + LI+L +I  KF     P  P Y Y P  QP P     P+P +P 
Sbjct:   25 GPRTPQQIASQKRLQATQAQVDEVVDIMKTNVEKVLERDQKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLKMMIIMGVIALIVLAIIVVKFMPESNPPPPAYGYQPGYQPGPNMQGAPAPGAPS 153
[Close]
BLAST of synaptobrevin vs. nr
Match: gi|442629488|ref|NP_001261269.1| (neuronal synaptobrevin, isoform J [Drosophila melanogaster] >gi|440215136|gb|AGB93964.1| neuronal synaptobrevin, isoform J [Drosophila melanogaster])

HSP 1 Score: 144.821 bits (364), Expect = 1.419e-40
Identity = 81/146 (55.48%), Postives = 104/146 (71.23%), Query Frame = 0 
Query:   12 TPSADGGRPLGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFFASDQPSHPQYYYPPP--QQPAPPSPQSPDQS 155
             P+ +GG     DG+ + GP   QQ+ A +R+ Q QAQVDEV  IM+ N+EKVLERD+KL+ELD+RADALQ GASQFE+QAGKLK KFWLQNLK MI+MG +GL+++ +I  K + SD  + PQ   PP   QQ AP S  +PD +
Sbjct:   16 APAGEGG-----DGEIVGGPHNPQQIAAQKRLQQTQAQVDEVVDIMRTNVEKVLERDSKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVVVGIIA-KPYMSDDNAAPQ---PPALQQQVAPASATAPDSA 152
[Close]
BLAST of synaptobrevin vs. nr
Match: gi|1062664673|ref|XP_017955795.1| (PREDICTED: vesicle-associated membrane protein 2 isoform X2 [Drosophila navojoa])

HSP 1 Score: 144.436 bits (363), Expect = 1.539e-40
Identity = 81/162 (50.00%), Postives = 104/162 (64.20%), Query Frame = 0 
Query:    6 PPTSQPTPSADGGRPLGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFFASDQPSHP-----QYYYPPPQQPAPPSPQSPDQSVHETADE 162
            PP   P P+ +GG     DG+ + GP+  QQ+ A +R+ Q QAQVDEV  IM+ N+EKVLERDAKL+ELD+RADALQ GASQFE+QAGKLK KFWLQNLK MI+MG +GL+++ +I   F + D    P     Q +   P   +  +P  P Q  H    E
Sbjct:   11 PPVDGP-PAGEGG-----DGEIVGGPRNPQQIAAQKRLQQTQAQVDEVVDIMRTNVEKVLERDAKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVIVGIIAKPFMSDDAAVSPSPALQQVHASAPATASESAPLPPQQPHHTLKSE 166
[Close]
BLAST of synaptobrevin vs. nr
Match: gi|1013921998|ref|XP_016029872.1| (uncharacterized protein Dsimw501_GD17610, isoform E [Drosophila simulans] >gi|900899164|gb|KMY96892.1| uncharacterized protein Dsimw501_GD17610, isoform E [Drosophila simulans])

HSP 1 Score: 144.436 bits (363), Expect = 1.616e-40
Identity = 81/146 (55.48%), Postives = 104/146 (71.23%), Query Frame = 0 
Query:   12 TPSADGGRPLGPDGKPLPGPQQMQQVMAGRRMGQQQAQVDEVCGIMKDNLEKVLERDAKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLLIYWKFFASDQPSHPQYYYPPP--QQPAPPSPQSPDQS 155
             P+ +GG     DG+ + GP   QQ+ A +R+ Q QAQVDEV  IM+ N+EKVLERD+KL+ELD+RADALQ GASQFE+QAGKLK KFWLQNLK MI+MG +GL+++ +I  K + SD  + PQ   PP   QQ AP S  +PD +
Sbjct:   16 APAGEGG-----DGEIVGGPHNPQQIAAQKRLQQTQAQVDEVVDIMRTNVEKVLERDSKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVVVGIIA-KPYMSDDNAAPQ---PPALQQQVAPASATAPDSA 152
The following BLAST results are available for this feature:
BLAST of synaptobrevin vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAG000000095146.935e-5774.07supercontig:LSalAtl2s:LSalAtl2s612:212145:215065:1... [more]
EMLSAG000000095131.053e-4680.34supercontig:LSalAtl2s:LSalAtl2s612:211386:211874:1... [more]
EMLSAG000000004073.311e-2955.43supercontig:LSalAtl2s:LSalAtl2s1064:131354:159067:... [more]
EMLSAG000000103936.375e-1660.34supercontig:LSalAtl2s:LSalAtl2s68:1408979:1409257:... [more]
EMLSAG000000070957.807e-1543.08supercontig:LSalAtl2s:LSalAtl2s3:880430:881669:1 g... [more]
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BLAST of synaptobrevin vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|81175197|sp|P18489.3|SYB_DROME1.491e-2859.04RecName: Full=Synaptobrevin[more]
gi|135096|sp|P13701.1|SYB_TORCA1.496e-2854.81RecName: Full=Synaptobrevin; AltName: Full=Synapti... [more]
gi|6094391|sp|P47193.3|VAMP2_XENLA3.988e-2864.86RecName: Full=Vesicle-associated membrane protein ... [more]
gi|51704191|sp|P63026.2|VAMP2_BOVIN9.431e-2864.86RecName: Full=Vesicle-associated membrane protein ... [more]
gi|74956515|sp|O02495.1|SYB1_CAEEL9.602e-2866.22RecName: Full=Synaptobrevin-1; AltName: Full=Synap... [more]
gi|51704188|sp|P63045.2|VAMP2_RAT9.638e-2864.86RecName: Full=Vesicle-associated membrane protein ... [more]
gi|83288286|sp|Q9N0Y0.3|VAMP2_MACMU9.638e-2864.86RecName: Full=Vesicle-associated membrane protein ... [more]
gi|160332380|sp|Q0V7N0.2|VAMP1_BOVIN1.043e-2759.55RecName: Full=Vesicle-associated membrane protein ... [more]
gi|2842651|sp|Q62442.1|VAMP1_MOUSE1.718e-2764.00RecName: Full=Vesicle-associated membrane protein ... [more]
gi|74846112|sp|Q60WU2.1|SYB1_CAEBR1.891e-2766.22RecName: Full=Synaptobrevin-1; AltName: Full=Synap... [more]

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BLAST of synaptobrevin vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325323544|ref|XP_023343610.1|7.094e-5870.31vesicle-associated membrane protein 2-like isoform... [more]
gi|1325323540|ref|XP_023343608.1|4.308e-4666.67synaptobrevin-1-like isoform X1 [Eurytemora affini... [more]
gi|1339081651|ref|XP_023701835.1|4.817e-4461.54synaptobrevin-1 [Cryptotermes secundus] >gi|133092... [more]
gi|242023558|ref|XP_002432199.1|1.987e-4261.48synaptobrevin, putative [Pediculus humanus corpori... [more]
gi|924558729|gb|ALC43741.1|5.669e-4252.23n-syb, partial [Drosophila busckii][more]
gi|1227958012|ref|XP_021924581.1|3.146e-4156.62vesicle-associated membrane protein 2 [Zootermopsi... [more]
gi|769858756|ref|XP_011641067.1|1.025e-4058.14PREDICTED: vesicle-associated membrane protein 2 i... [more]
gi|442629488|ref|NP_001261269.1|1.419e-4055.48neuronal synaptobrevin, isoform J [Drosophila mela... [more]
gi|1062664673|ref|XP_017955795.1|1.539e-4050.00PREDICTED: vesicle-associated membrane protein 2 i... [more]
gi|1013921998|ref|XP_016029872.1|1.616e-4055.48uncharacterized protein Dsimw501_GD17610, isoform ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold546_size140615supercontigscaffold546_size140615:128923..132547 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:membrane
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold546_size140615-snap-gene-0.36-mRNA-1maker-scaffold546_size140615-snap-gene-0.36-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold546_size140615:128923..132547-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold546_size140615-snap-gene-0.36 ID=maker-scaffold546_size140615-snap-gene-0.36|Name=synaptobrevin |organism=Tigriopus kingsejongensis|type=gene|length=3625bp|location=Sequence derived from alignment at scaffold546_size140615:128923..132547- (Tigriopus kingsejongensis)
CAATTTGAGAAGCAAGCTGGGAAGCTCAAGAACAAGTTCTGGTTACAGAA
CATGAAGTTTATAGTCATTGGTGGTATCTTGGGGCTGATTCTGTTGATCA
TGTTGTACTTCAAATTTGTTGATGAGCCTCAGCAGCCCGTCTACTATCCA
CCTCCACCCCCCCCACCCCAAGGAGGCATGTCCTCAGGAAGCAATGCCCA
AGCCCCGGGACCTTCCCAATAAGCCAGCCAAATTATGTTCTCCCTTGATT
TGCTCCTATCATTTCAACAGATGTACACTTCACAATGTTTGTTAAGATGG
CATTTGTCTTACCCACCATTGAGTACGAGTATGTAGGACCAGGATATTCA
TCTGCCATCATACCATAGCGTTTATGCGAAAGAATTGCAAACAGTTGAAA
TGTTTAACCACTCGAGAGGAACATTGATCTGGGCCCCGACACTGAGGCAT
CCGACAAGCATTAACTCATGGAGCACATGAGCCACTCTGAATGTGTCAGA
TGAGCCTGTAGGTACCCACGCCCGTGCATTATTCAGCAACAGTACACCGA
TGCAAAATCCCCCTTCATTGCAAACTTAAATTTTACATTTTTGACCCAAA
GAACCCATCTCAATGTGTACAGCCAATTGTGCGTTTGATTAGCATGAGTT
GCAAAGTTGAAATTTGATCTTCCCTTAGATGGCGGAGCTAAATAGCTCAC
ATTACTACGTTTTGGCTCAACCCTGTTTTCCAATCATAACAGTATGTGCA
GTTTGTACTACTGCAGTATGTCAAACTGGCAATTTCTGGATTTTTTTAAT
ATCAGATTCACAATTCATCCGGAACCCCTCGACTGACTACCTTCGAATAC
CTTATCATGTTGGGCCCTTCCCTGTCACCTGCAATAGTATGTCCACTGTT
TTAGAGCATGGTTAGCTAATTATTCGTACTTCCCTGGTTCCTAGATTGTC
CCATAGCCATAGAAATTATCTTGAGCATGACTATGGAGAGGGCAATGCAT
TGGTTTTCTGGCGTTCCCTCCTCACTTACCACCCAAACACTTTCTTCACA
TTCAGTCATTGGTCAAACCCCTGTTCCATGACCCTGATCTATGAAATGAG
ATCAAACATGCCAGGTTGTGGCATTGTCCCACTAAGTGAAAACCTATTGG
ATCAAAAAGTGACCTCAGCGATGTTTGGGTTCCTTCGTTCTTTTCTTCGA
CCTTCTCTGCTAGCTTGTTTTTCAGCATGCTCAATGCTCTTTGGTTTCAA
ACTGGACACAATTCTTCCATTTTCCTTACTTTCTCACACATAAAAAACAT
GGAAGACAAACCAGACCGAGTTGATTAGCGCATCTTTGAGTTTCGTCATG
TTCGTCAGTGTCATTGCGTCTAGTGAGATAGAAATTGAGGCTCATTGTAA
TGCTTTTCTGTCCGGTTGCAATCATTGCTCACGAGACAATGCAATTCGTT
CCAATATTTTGCAGGATAGATCAGTGTGAAAATGTCTGATAAGCAGCCCC
CTACTTCTCAGCCCACTCCCTCCGCAGATGGAGGGCGGCCTCTGGGACCG
GATGGCAAGCCCTTGCCGGGTCCTCAGCAAATGCAGCAGGTCATGGCCGG
GCGGCGCATGGGCCAACAGCAGGCGCAAGTGGATGAGGTGTGCGGGATCA
TGAAAGACAACCTGGAGAAGGTGCTTGAAAGGGACGCCAAACTCAATGAG
CTGGATGAGCGGGCGGATGCACTCCAGGATGGGGCCTCTCAATTTGAGAA
GCAAGCTGGGAAGCTGAAGAACAAGTTCTGGTTGCAGAATCTCAAGTCCA
TGATCATGATGGGCGCCGTGGGCCTGATTTTGCTGCTGCTCATTTACTGG
AAGTTCTTTGCGTCCGATCAGCCCTCCCACCCACAGTACTACTATCCACC
CCCTCAGCAACCCGCTCCCCCCTCTCCCCAGAGCCCTGATCAATCGGTCC
ATGAGACTGCAGATGAATAGACTGGATTCGATGGTGTCGCCTAATGTGAC
CAAGCCCTAGCATCAATCTTCTCCCACAATCACCCCAACATTCATTCCTC
TCACTCATGATATCAAAGTTAATTAAACCCATAGCATTCATCTCTTCTAG
TCTCACAGTCTAAGGCCAATCATGCCTAGCCAGAATGCCAAGGTTCTTCA
ACGATCGGAACTTGCACCTTATTTGAGTATACATACTACATTAATTGGTC
TTGTTTAGCATCAGTTGTGTAGGCTGTTTAGTTTAGCTTCATCTGTCCGT
TGTATTGAGTTGAATACGAGTAAATAGCATAGCTAGCTTGCCCAACCTAA
ACTGTCTGTACGACTTTGGTTTGCTCGATGAGATCATCTGATAATGAGCC
CTAGGTCTGGATCCAAATTATTTAAACCCAACATGAAAATAGACACACTT
TCCCATTCCACTCTCTCCTTTGAATCAAGATCCCACCAGTCTAATGGTTT
AAAATTCCCAGTTTTGAGAACTGGTCACCAAAGCAATGTCAAGAAATTCA
TGCCCACCTTTTCACTCCACCCCCGCCCTCGGTTGAATATTGTCGAAACA
TGCTCGATCCTCTTCTAAAGATTGGACCCTTTGCTCTTCATGCCTACCAT
TTGAAAGATTCGATTGTCAATTGTCACACATGATTACCCGCCATTCATTA
TCATAAATAAATCATTTTTTGTACACATTTGTCAACGATTCACAACCTCA
ATCATGGGAATCACCTCTTCGCCCAGCTACAAAGGTAAGTCAGCAGCCAC
AGATTGTCGAATCCAACTCGGGACGACCAGATTCGATCTTGGATTGCTTC
GTTGCTCGTAGTTATTCTTGCTTCTTCATAGTACAGATAAGGTCTGCCTC
CTCAATGACTATTTTAACCCCAAGTAATCAAAGGCGGTATACTTACGACA
TATGGGTCGTACTAATTCAGCGCCATCCTTGACGGTGAAAGGCAATTGGA
GATTTTGAAAGGGCACCTGCTCAATGAGACAATGACATCGTTGTCAACCC
GAGTATATTCAAGCCGAAAAAGAAAATTAGTCCCACCCCACTGAGCTCCC
GCTAACATGTTCCCTGCTCCAACGTAGAATCATGGCGGAGAAAGGTGAGA
AGCCCGAGAGGCCCCTGGGACCTGATGGCAAACCCATTCCGGGCCCCGAG
CAAATGCGTCAAATCCAAGCATCCCGTAAGATGGGCACGCAACAAGCGCA
AGTGGACGAGGTCATTGGGATGATGCACCAAAACGTGGAGCAAGTGTAAG
TGGATCCTTATCCACCCTTTAATGTCGGACATTTTGCCATCTTTAATAGC
CTCCCTGATTTTTTCTTCCAGGTTGGAGCGCGATACCAAACTGAATGCCT
TGGAGGAGCGTGCCGATGCTCTCCAGGATGGCAGTGCACAGTTTGAAAAG
CGGGCTGCGTCCCTCAAGAACAAGTTCTGGTTGGAGAATCTCAAGTCTAT
GATTGCCATGGGAGTGATTGGACTAATACTCTTGGCCATCGTGTACTACA
AGTTTCTGGCGCCCCCGCCGCAACCCGTGTACCCACCCGGGTACATGCAG
CCACCCCCGCCACCACCGCCCCAATCCCACTCGGGAGGGGGTGATAGTGG
AGGATCGGGAGGCTCCGGGGAATAG
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Synonyms
The feature 'synaptobrevin ' has the following synonyms
Synonym
Tk00845
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