exosome complex exonuclease, maker-scaffold604_size126151-snap-gene-0.31 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of exosome complex exonuclease vs. L. salmonis genes
Match: EMLSAG00000000627 (supercontig:LSalAtl2s:LSalAtl2s109:762668:765820:-1 gene:EMLSAG00000000627 transcript:EMLSAT00000000627 description:"maker-LSalAtl2s109-augustus-gene-7.11") HSP 1 Score: 196.438 bits (498), Expect = 4.997e-54 Identity = 92/174 (52.87%), Postives = 121/174 (69.54%), Query Frame = 0 Query: 14 IDSSEFPEAIEDALPAIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAPDL 187 ID S+F E + LP P +P+ E + R+DF NECVFTIDP A+DLDDALS+ + G K+ VHIADVS+FV+ + LD+ A+ R T+VYL +V+PMLPR L E++CSL P RLTFSVEWI+ E+G I + W G+S+I+S L +EHAQ MLD+P K SNE P + Sbjct: 482 IDESDFSEEVAKCLPTQPFSIPQEEYEKRRDFTNECVFTIDPKTARDLDDALSIEKVDGNRYKVGVHIADVSYFVRKDTELDKCAADRGTSVYLVHRVIPMLPRELCENLCSLNPDVPRLTFSVEWIITEDGKIESTWFGRSIIKSVVKLAYEHAQEMLDNPSKEWKSNELPPI 655
BLAST of exosome complex exonuclease vs. L. salmonis genes
Match: EMLSAG00000011529 (supercontig:LSalAtl2s:LSalAtl2s799:320465:323757:-1 gene:EMLSAG00000011529 transcript:EMLSAT00000011529 description:"snap_masked-LSalAtl2s799-processed-gene-3.36") HSP 1 Score: 107.457 bits (267), Expect = 1.547e-24 Identity = 74/238 (31.09%), Postives = 126/238 (52.94%), Query Frame = 0 Query: 1 LNVKSEAILDELEIDSSEFPEAIEDALPAIPLVLPE-SEI-QARKDFR-NECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILD--ENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAPDLDKNEIQGKLRHCNEKMKAVASAQYQSTMVHLAKY-VELQGPIESEA 232 L + + +L E I F I + +P P+ +E+ R D R + + +IDP +D+DDALS+ + +++ VHIADV++FVK S+ D+ AS+R+TTVYL + MLP L ++CSL +R +V W LD + +++ W G+++IRS L +E AQ+++D N++P+ D E+ +L++ + Q + + L K +E+Q E E Sbjct: 416 LETEIDCLLMENNISVGPFSSGILNEMPNGDNWKPDPNEVSNNRNDLRHSHFIMSIDPQGCEDVDDALSIRTLKNGNLELGVHIADVTYFVKSGSLTDKEASQRATTVYLADRRYDMLPSVLSGNLCSLLGGVERYAVTVLWELDPKDPSTVISVWYGRTLIRSRYKLTYEAAQTIID-------GNKSPE-DIREMVAELKNVKGQSLGKRCNQLREMLTTLCKVALEIQKKREKEG 645
BLAST of exosome complex exonuclease vs. L. salmonis genes
Match: EMLSAG00000010783 (supercontig:LSalAtl2s:LSalAtl2s714:137945:161106:-1 gene:EMLSAG00000010783 transcript:EMLSAT00000010783 description:"snap_masked-LSalAtl2s714-processed-gene-1.8") HSP 1 Score: 83.5741 bits (205), Expect = 1.388e-17 Identity = 66/218 (30.28%), Postives = 103/218 (47.25%), Query Frame = 0 Query: 320 TDYSQRSILVYNRVPKCASGTTNHLLKMM---------KKVKTKLQVPFWSNPMNKFHLKELCVTMDQIRTQVPVVIGHFFHVEWQDFCGLDQGDQVVWMNQIRHPVSRFISYYYFQSSPEMI---RRKF-HLGRNQTNPMKMSIERCVLEAQKECNFTQGAYNK---QVMSFFCGQARECSTIGSFEALQKAKQVVEEQYAVIGIQEDYDRSLLLYE 521 T + + IL +NRVPK S TT LLK + K K+++ SN K L + D V HV + +F + +++N +R PV R IS+YY+ +P +R F L N +K E CV KEC++ G Q+ FFCGQ +C+ + A++KA + VE+ YAV+G+ E+ +++L + E Sbjct: 104 TRKAAKEILFFNRVPKVGSQTTMELLKSLSIKNNFHYHKDRTQKVEMIKLSNNEEK-KLTRFVSSFDAPSVYVK-------HVCFSNFSRYNL-PMPIYVNMVRDPVERVISWYYYVRAPWYFVERKRAFPDLPLPNPNWLKKDFEFCVRRGDKECSYRTGDERTDFGQLTEFFCGQEDDCTGFNTEVAMKKAMENVEKHYAVVGVLEELNKTLTVLE 312
BLAST of exosome complex exonuclease vs. L. salmonis genes
Match: EMLSAG00000004802 (supercontig:LSalAtl2s:LSalAtl2s253:627553:628590:-1 gene:EMLSAG00000004802 transcript:EMLSAT00000004802 description:"augustus_masked-LSalAtl2s253-processed-gene-6.4") HSP 1 Score: 69.707 bits (169), Expect = 3.088e-13 Identity = 59/208 (28.37%), Postives = 99/208 (47.60%), Query Frame = 0 Query: 320 TDYSQRSILVYNRVPKCASGTTNHL-LKMMKKVKTKLQVPFWSNPMNKFHLKELCVTMDQIRT---QVPVVI-GHFFHVEWQDFCGLDQGDQVVWMNQIRHPVSRFISYYYFQSSPEMIRRKFHLGRNQTNPMKMSIERCVLEAQKECNFTQGAYNKQVMSFFCGQARECSTIGSFEALQKAKQVVEEQYAVIGIQEDYDRSLLLYEK 522 T S IL+YNR+PK AS T L + K + + + S + LK+ ++ I + ++P + GHF ++ +F L +++N IR P+ R +SYYYF + R R K++ + CV + +C+ + + +FCG R CS GS AL++AK V Y ++G+ ED + + + EK Sbjct: 22 TKISTPKILIYNRIPKTASTTLMQLPYTLCKTLGYSVLMVNVSRSTHYLTLKDQITFVNNITSWSKRLPALYHGHFSYL---NFERLGSPLSPLYINMIRRPIDRLVSYYYFLRYGDDYRVNKIRSRMGD---KVTFDECVEKKLPDCDPKKLWIQ---VPWFCGHFRRCSEPGSRWALEQAKLNVARSYFLVGLTEDLEGFIDILEK 220
BLAST of exosome complex exonuclease vs. L. salmonis genes
Match: EMLSAG00000000985 (supercontig:LSalAtl2s:LSalAtl2s116:1931796:1938447:-1 gene:EMLSAG00000000985 transcript:EMLSAT00000000985 description:"maker-LSalAtl2s116-augustus-gene-19.43") HSP 1 Score: 60.4622 bits (145), Expect = 9.999e-10 Identity = 54/211 (25.59%), Postives = 92/211 (43.60%), Query Frame = 0 Query: 326 SILVYNRVPKCASGTTNHLLKMMKKVKTKLQVPFWSNP----MNKFHLKELCVTMDQIRTQVPVVIGHFFHVEWQDFCGLDQGDQVVWMNQIRHPVSRFISYYYFQSSPEMIRRKFHLGRNQTNP----MKMSIERCVLEAQK-ECNFTQGAYN------KQVMSFFCGQARECSTIGSFEALQKAKQVVEEQYAVIGIQEDYDRSLLLYE 521 +I ++NRV K S + LL +K ++ + V P M + + +++ T+ V + H+ V DF +++N + IS++Y+Q + I + + P ++ CVL+ ECNF +G N + M FCG C+ S LQKAK+ VE Y V+G+ E + SL ++E Sbjct: 1422 NIYMFNRVAKTGSQSITQLLVALKP-ESGVDVQIDKRPVEFLMESYDAVKNFLSIIDRETKPTVFVRHYNFV---DFTKYGYSWTPIYINMV-------ISWFYYQRASWNIVERIQTFPQEPLPDSKYLRKDFPSCVLDPNDDECNFIEGTSNVDYPDHRSQMMAFCGHELYCADFNSKAVLQKAKENVERFYPVVGVIEALNESLTVFE 1621
BLAST of exosome complex exonuclease vs. L. salmonis genes
Match: EMLSAG00000009067 (supercontig:LSalAtl2s:LSalAtl2s568:241144:247825:-1 gene:EMLSAG00000009067 transcript:EMLSAT00000009067 description:"maker-LSalAtl2s568-augustus-gene-1.61") HSP 1 Score: 58.9214 bits (141), Expect = 2.628e-9 Identity = 48/175 (27.43%), Postives = 76/175 (43.43%), Query Frame = 0 Query: 2 NVKSEAILDELEIDSSEFPEAIEDALPAIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILD-ENGNILAEWMGKSVIRSCANLDHEHAQSMLDHP 175 + ++E +L E +I S F +A+E LP +P + + Q R D R+ + ++DP D+DDAL + + A I +S L +L E L ++CSL+ DR FS W +D E + KS+I S + +E AQ +D P Sbjct: 454 STENEVLLLEHDIPHSSFSQAVEACLPTLPWKISPKDEQERVDLRDYVICSVDPPGCTDIDDALHCRTLPNGNFEXAYIILILSIIRXSLVILSE--------------------DLLSSNLCSLRGGVDRFAFSCIWEVDPETAVFKSTKFHKSIICSKKAMTYEQAQITIDDP 608
BLAST of exosome complex exonuclease vs. L. salmonis genes
Match: EMLSAG00000007455 (supercontig:LSalAtl2s:LSalAtl2s427:101390:102208:1 gene:EMLSAG00000007455 transcript:EMLSAT00000007455 description:"maker-LSalAtl2s427-augustus-gene-1.12") HSP 1 Score: 53.5286 bits (127), Expect = 1.263e-8 Identity = 36/130 (27.69%), Postives = 63/130 (48.46%), Query Frame = 0 Query: 388 GHFFHVEWQDFCGLDQGDQVVWMNQIRHPVSRFISYYYFQSSPEMIRRKFHLGRNQTNPMKMSIERCVLEAQKECNFTQGAYNKQVMSFFCGQARECSTIGSFEALQKAKQVVEEQYAVIGIQEDYDRSL 517 G + H+ + DF + + +++ IR P+ R+IS+YY+ IR ++ +NQ R + K+ + Q + +S+FCG +C L AK+ V+ Y+VIGI ED + +L Sbjct: 6 GRYKHMHFIDFTNYNHQNPK-YISIIRDPIQRYISWYYY------IRNPIYIVQNQF--------RVTVRQLKDQHHLQPNFPGSQISYFCGYIPDCFAGSLARRLSIAKENVDRYYSVIGITEDMNTTL 120
BLAST of exosome complex exonuclease vs. L. salmonis genes
Match: EMLSAG00000001391 (supercontig:LSalAtl2s:LSalAtl2s1236:51994:53604:1 gene:EMLSAG00000001391 transcript:EMLSAT00000001391 description:"maker-LSalAtl2s1236-snap-gene-0.50") HSP 1 Score: 53.1434 bits (126), Expect = 5.617e-8 Identity = 41/171 (23.98%), Postives = 78/171 (45.61%), Query Frame = 0 Query: 324 QRSILVYNRVPKCASGTTNHLLKMMKKVKTKLQVPFWSNPMNKFHLKEL------CVTMDQIRTQVPVVIG----------HFFHVEWQDFCGLDQGDQVVWMNQIRHPVSRFISYYYFQSSPEMIRRKFHLGRNQT-----------NPMKMSIERCVLEAQKECNFTQG 467 Q IL++NRVPK S T ++ + ++ +++ ++ LK L +T + ++ V + + HF V++++F + +++N +RHPV R IS+YY+ +P +F G N + +K SI+ C+ KEC + +G Sbjct: 45 QEDILLFNRVPKVGSQTVWGIIDKLARLNN------FNSTIDNLKLKALRGGENVYLTTPEQKSYVDMWMNDIDRPYSYNKHFLFVDFEEFGYRNP----IYINFVRHPVERVISWYYYIRNPSY---QFSYGLNASLFQSIKGTLTIGRLKRSIDDCIFMGYKECTYAKG 202
BLAST of exosome complex exonuclease vs. SwissProt
Match: gi|527504043|sp|Q0V9R3.2|DI3L2_XENTR (RecName: Full=DIS3-like exonuclease 2) HSP 1 Score: 207.223 bits (526), Expect = 1.194e-56 Identity = 99/183 (54.10%), Postives = 129/183 (70.49%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALPA-IPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAP 185 ++E IL E +D S+FP+ + LP +P +P+ E Q RKD RNEC+FTIDP A+DLDDALS P+ ++ VHIADVS+FV S LD MAS+R+T+VYL QKV+PMLPR L E++CSL P DRLTFSV W + G IL EW G+SVI SC L ++HAQ+M++HPDK + +E P Sbjct: 303 ETEGILVEYGVDFSDFPDKVLQCLPQDLPWTIPQEEFQKRKDLRNECIFTIDPATARDLDDALSCKPLPDGNFEVGVHIADVSYFVAEGSALDIMASERATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTFSVIWKITPQGEILDEWFGRSVICSCVKLSYDHAQNMINHPDKKIEQHELP 485
BLAST of exosome complex exonuclease vs. SwissProt
Match: gi|296439471|sp|Q8IYB7.4|DI3L2_HUMAN (RecName: Full=DIS3-like exonuclease 2; Short=hDIS3L2) HSP 1 Score: 196.438 bits (498), Expect = 1.032e-52 Identity = 92/185 (49.73%), Postives = 127/185 (68.65%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALP-AIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAPDL 187 ++E IL E +D S+F + + LP +P +P E R+D R +C+FTIDP A+DLDDALS P++ K+ VHIADVS+FV S LD++A++R+T+VYL QKVVPMLPR L E++CSL P D+LTFSV W L G IL EW G+++IRSC L +EHAQSM++ P + + + E P + Sbjct: 332 ETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKELPPI 516
BLAST of exosome complex exonuclease vs. SwissProt
Match: gi|81900485|sp|Q8CI75.1|DI3L2_MOUSE (RecName: Full=DIS3-like exonuclease 2) HSP 1 Score: 189.119 bits (479), Expect = 3.601e-50 Identity = 88/185 (47.57%), Postives = 128/185 (69.19%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALP-AIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAPDL 187 ++E IL E +D S+F + + LP ++P +P E+ R+D R +C+FTIDP A+DLDDAL+ ++ ++ VHIADVS+FV S LD++A++R+T+VYL QKVVPMLPR L E++CSL P D+LTFSV W L G IL EW G+++IRSC L ++HAQSM+++P + + E P + Sbjct: 330 ETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRDLRKDCIFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQSMIENPTEKIPEEELPPI 514
BLAST of exosome complex exonuclease vs. SwissProt
Match: gi|122223736|sp|Q0WPN0.1|DI32L_ARATH (RecName: Full=Inactive exonuclease DIS3L2; AltName: Full=DIS3-like exonuclease 2; AltName: Full=Protein SUPPRESSOR OF VARICOSE; AltName: Full=RRP44 homolog B; AltName: Full=Ribosomal RNA-processing protein 44 homolog B; Short=AtRRP44B) HSP 1 Score: 167.933 bits (424), Expect = 7.716e-43 Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = 0 Query: 7 AILDELEIDSSEFPEAIEDALPAIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAPDLDKNEIQGKLRHCN 200 AIL + + S+F +LP +P +PE E+Q RKD R+ CV TIDP A DLDDALSV + G ++ VHIADVS+FV P + LD A RST+VYL Q+ + MLP L E++ SL P DRL FS+ W L+ G+++ W+G+++IRSC L ++HAQ ++D V N P L G + C+ Sbjct: 441 AILYQNSVCDSDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSVQSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVGSLSPGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDG-KSDVAENGWPAL-----HGSFKWCD 628
BLAST of exosome complex exonuclease vs. SwissProt
Match: gi|527525094|sp|P0DM58.1|DI3L2_ARATH (RecName: Full=DIS3-like exonuclease 2; AltName: Full=Protein SUPPRESSOR OF VARICOSE) HSP 1 Score: 167.933 bits (424), Expect = 9.114e-43 Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = 0 Query: 7 AILDELEIDSSEFPEAIEDALPAIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAPDLDKNEIQGKLRHCN 200 AIL + + S+F +LP +P +PE E+Q RKD R+ CV TIDP A DLDDALSV + G ++ VHIADVS+FV P + LD A RST+VYL Q+ + MLP L E++ SL P DRL FS+ W L+ G+++ W+G+++IRSC L ++HAQ ++D V N P L G + C+ Sbjct: 441 AILYQNSVCDSDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSVQSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVGSLSPGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDG-KSDVAENGWPAL-----HGSFKWCD 628
BLAST of exosome complex exonuclease vs. SwissProt
Match: gi|74581952|sp|O14040.1|DI3L2_SCHPO (RecName: Full=DIS3-like exonuclease 2) HSP 1 Score: 162.54 bits (410), Expect = 4.042e-41 Identity = 81/170 (47.65%), Postives = 110/170 (64.71%), Query Frame = 0 Query: 5 SEAILDELEIDSSEFPEAIEDALPAIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGN-ILAEWMGKSVIRSCANLDHEHAQSMLD 173 + A+L E I SS F + + + LP ++ EI+ R+D RNE + TIDP A+DLDDA+S + ++ VHIADV+HFVKP S LD+ A+ R+TTVYL QK +PMLP L E +CSL P +RL FSV W LD NG I W GK+VI++CA L + AQ +++ Sbjct: 404 TNALLLENGISSSPFSDEVLNCLPPDDWIISHEEIKKRRDLRNELIITIDPETARDLDDAVSCRALDNGTYEVGVHIADVTHFVKPDSALDKEAASRATTVYLVQKAIPMLPPLLCERLCSLNPNVERLAFSVFWKLDSNGKEIGKRWFGKTVIKTCARLAYSEAQGVIE 573
BLAST of exosome complex exonuclease vs. SwissProt
Match: gi|353526303|sp|Q09568.2|DI3L2_CAEEL (RecName: Full=DIS3-like exonuclease 2) HSP 1 Score: 150.984 bits (380), Expect = 2.557e-37 Identity = 80/196 (40.82%), Postives = 120/196 (61.22%), Query Frame = 0 Query: 1 LNVKSEAILDELEIDSSEFPEAIEDALP---AIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPM------SGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAPDL 187 ++ ++E I+ E +ID EF + ++LP A +P++E + R+DFR++ VFTIDP A+DLDDAL + ++I VHIADV+ F+K + LD+ AS+R + YL Q V+PMLPR L E +CSL P DRL+FS + + + W G+SVIRS L +EHAQ +++P+K +E PD+ Sbjct: 289 IDTETERIVYEHQIDHREFSDECLESLPITTAENWKVPDAEFEYRRDFRSDIVFTIDPKTARDLDDALHAKHIDDCDGKGTPGLEIGVHIADVTFFLKEGTELDKWASERGNSTYLSQTVIPMLPRILCEQLCSLNPGVDRLSFSTVFKMSYEAELYDVWFGRSVIRSRVKLAYEHAQDFIENPEKDFTCDELPDI 484
BLAST of exosome complex exonuclease vs. SwissProt
Match: gi|585053|sp|P37202.1|DIS3_SCHPO (RecName: Full=Exosome complex exonuclease dis3; AltName: Full=Chromosome disjunction protein 3; AltName: Full=Mitotic control protein dis3; AltName: Full=Ribosomal RNA-processing protein 44) HSP 1 Score: 135.961 bits (341), Expect = 3.156e-32 Identity = 72/176 (40.91%), Postives = 102/176 (57.95%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALP------AIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLD 173 ++EA+L E ++ FP+A+ D LP +P + RKDFR++ + +IDP QD+DDAL + ++ VHIADV+HFVKP + +D A+ R TTVYL K + MLP LG D+CSL+P +R FS W +DEN NI+ KSVI S + AQ+ +D Sbjct: 452 ETEALLLEYDVQHRPFPKAVLDCLPEEGHNWKVPADKTHPLWKNRKDFRDKLICSIDPPGCQDIDDALHACVLPNGNYEVGVHIADVTHFVKPNTSMDSEAASRGTTVYLVDKRIDMLPMLLGTDLCSLRPYVERFAFSCIWEMDENANIIKVHFTKSVIASKEAFSYADAQARID 627
BLAST of exosome complex exonuclease vs. SwissProt
Match: gi|166231533|sp|Q9CSH3.4|RRP44_MOUSE (RecName: Full=Exosome complex exonuclease RRP44; AltName: Full=Protein DIS3 homolog; AltName: Full=Ribosomal RNA-processing protein 44) HSP 1 Score: 132.88 bits (333), Expect = 2.953e-31 Identity = 66/171 (38.60%), Postives = 105/171 (61.40%), Query Frame = 0 Query: 3 VKSEAILDELEIDSSEFPEAIEDALPAIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLD 173 ++E +L E ++ F +A+ LP +P + E +++ R+D R+ CV ++DP D+DDAL +S +++ VHIADVSHF++P + LD+ +++R TTVYL +K + M+P L ++CSL+ DRL FS W ++ N IL KSVI S A+L + AQ +D Sbjct: 428 TETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID 598
BLAST of exosome complex exonuclease vs. SwissProt
Match: gi|18202798|sp|Q9CH00.1|RNR1_LACLA (RecName: Full=Ribonuclease R 1; Short=RNase R 1; AltName: Full=VacB protein homolog 1) HSP 1 Score: 131.724 bits (330), Expect = 6.433e-31 Identity = 73/188 (38.83%), Postives = 108/188 (57.45%), Query Frame = 0 Query: 17 SEFPEAIEDALPAIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAPDLDKNEIQGKLRHCNEKMK 204 SEFP+ + D A+P +PE+EI R D+RNE FTID A+DLDDA+ + ++ VHIADVSH+V S LD+ A +R T+VY+ +VVPMLP L ICSL P +RLT S + G ++ + +S+I++ + ++ M+ D++ L N A D +I +L H E M+ Sbjct: 234 SEFPKEVLDQAEAVPEEVPENEIVGRVDYRNEITFTIDGADAKDLDDAVHAKRLENGNYELGVHIADVSHYVTENSPLDKEAYERGTSVYVTDRVVPMLPERLSNGICSLNPRINRLTQSCVMEISPEGRVINYQISQSIIKTTERMTYDAVNQMI-AGDEAALENYAKIADSVKIMVELHHILEAMR 420
BLAST of exosome complex exonuclease vs. nr
Match: gi|1325276779|ref|XP_023323040.1| (DIS3-like exonuclease 2 [Eurytemora affinis]) HSP 1 Score: 208.379 bits (529), Expect = 6.257e-56 Identity = 100/197 (50.76%), Postives = 138/197 (70.05%), Query Frame = 0 Query: 1 LNVKSEAILDELEIDSSEFPEAIEDALPA--IPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPD-KSVLSNEAPDLDKNEIQG 194 +N ++E +L E ++ EFPE++ + LP +P+SEIQ R+DFRNECVFTIDP+ A+DLDDALSV ++ VHIADV++FV+ + LD A+ R+T+ YL QKVVPMLPR L E++CSL P EDRLT++VEW ++E+G I +EW G++VIRSC L +EHAQSM+D P+ K + E P +D G Sbjct: 72 INARTEGLLLEYNLEYEEFPESVLNDLPENHKNWSIPDSEIQLRRDFRNECVFTIDPLTARDLDDALSVTQEKDGNYRVGVHIADVAYFVREGTDLDGAAASRTTSTYLVQKVVPMLPRPLCENLCSLNPGEDRLTYTVEWTINEDGEIQSEWFGRTVIRSCVKLAYEHAQSMIDCPERKDWTTEELPSIDPRYTSG 268
BLAST of exosome complex exonuclease vs. nr
Match: gi|1360798901|gb|AVN99029.1| (DIS3-like exonuclease 2, partial [Procambarus clarkii]) HSP 1 Score: 209.534 bits (532), Expect = 2.870e-54 Identity = 93/185 (50.27%), Postives = 133/185 (71.89%), Query Frame = 0 Query: 1 LNVKSEAILDELEIDSSEFPEAIEDALPAIPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAP 185 + ++EA+L E +D +EFP+ + LP++P +P EI++R D R+EC+FTIDP A+DLDDA+S +P+ ++ VHIADVS+F+ ++LDE+AS R+T+VYL QKV+PMLPR L E +CSL P EDRL FSV W L +G ++ EW G++VIRSC L +EHAQSM+++P+K E P Sbjct: 684 VEAETEAMLLEYGVDYAEFPDTVLQDLPSLPWSIPLQEIKSRTDLRDECIFTIDPSTARDLDDAVSCLPLPSGNYRVGVHIADVSYFIPEGTLLDEIASSRATSVYLTQKVIPMLPRVLCEHLCSLNPGEDRLAFSVIWELRPSGEVVGEWFGRTVIRSCVKLSYEHAQSMIENPNKKWSEEEIP 868
BLAST of exosome complex exonuclease vs. nr
Match: gi|527504043|sp|Q0V9R3.2|DI3L2_XENTR (RecName: Full=DIS3-like exonuclease 2) HSP 1 Score: 207.223 bits (526), Expect = 3.701e-54 Identity = 99/183 (54.10%), Postives = 129/183 (70.49%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALPA-IPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAP 185 ++E IL E +D S+FP+ + LP +P +P+ E Q RKD RNEC+FTIDP A+DLDDALS P+ ++ VHIADVS+FV S LD MAS+R+T+VYL QKV+PMLPR L E++CSL P DRLTFSV W + G IL EW G+SVI SC L ++HAQ+M++HPDK + +E P Sbjct: 303 ETEGILVEYGVDFSDFPDKVLQCLPQDLPWTIPQEEFQKRKDLRNECIFTIDPATARDLDDALSCKPLPDGNFEVGVHIADVSYFVAEGSALDIMASERATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTFSVIWKITPQGEILDEWFGRSVICSCVKLSYDHAQNMINHPDKKIEQHELP 485
BLAST of exosome complex exonuclease vs. nr
Match: gi|118404918|ref|NP_001072804.1| (DIS3-like exonuclease 2 [Xenopus tropicalis] >gi|111307895|gb|AAI21426.1| DIS3 mitotic control homolog-like 2 [Xenopus tropicalis]) HSP 1 Score: 207.223 bits (526), Expect = 3.812e-54 Identity = 99/183 (54.10%), Postives = 129/183 (70.49%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALPA-IPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAP 185 ++E IL E +D S+FP+ + LP +P +P+ E Q RKD RNEC+FTIDP A+DLDDALS P+ ++ VHIADVS+FV S LD MAS+R+T+VYL QKV+PMLPR L E++CSL P DRLTFSV W + G IL EW G+SVI SC L ++HAQ+M++HPDK + +E P Sbjct: 303 ETEGILVEYGVDFSDFPDKVLQCLPQDLPWTIPQEEFQKRKDLRNECIFTIDPATARDLDDALSCKPLPDGNFEVGVHIADVSYFVAEGSALDIMASERATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTFSVIWKITPQGEILDEWFGRSVICSCVKLSYDHAQNMINHPDKKIEQHELP 485
BLAST of exosome complex exonuclease vs. nr
Match: gi|1020574975|ref|XP_016114445.1| (PREDICTED: DIS3-like exonuclease 2 [Sinocyclocheilus grahami]) HSP 1 Score: 200.29 bits (508), Expect = 4.875e-54 Identity = 102/220 (46.36%), Postives = 143/220 (65.00%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALPA-IPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAPDLDKN----EIQGKLRHCNEKMKAVASAQYQSTMVHL 218 ++E I+ E ++D SEF E + + LP +P +P E+ R+D R ECVFTIDP A+DLDDALS +S ++ VHIADVS+FV+ SVLD++A KR+T+VYL QKV+PMLPR L E++CSL P DRLTFSV W L G IL+EW G++VI SC + ++HAQSM++ PDK + E P N EIQ + + K + + +++ + L Sbjct: 237 ETEGIMTEYDVDFSEFSEEVLNCLPQDLPWSIPAHELSRRRDLRKECVFTIDPATARDLDDALSCKQLSDGNFEVGVHIADVSYFVEEGSVLDQIAGKRATSVYLVQKVIPMLPRLLCEELCSLNPLTDRLTFSVIWKLSPEGKILSEWFGRTVICSCIKMSYDHAQSMIEAPDKHFSAEELPPCSPNHRIHEIQEAILDLHNIAKQLRAQRFEGGALQL 456
BLAST of exosome complex exonuclease vs. nr
Match: gi|1069306337|ref|XP_018096844.1| (PREDICTED: DIS3-like exonuclease 2 isoform X3 [Xenopus laevis]) HSP 1 Score: 203.756 bits (517), Expect = 4.522e-53 Identity = 97/183 (53.01%), Postives = 127/183 (69.40%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALPA-IPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAP 185 ++E IL E +D S+FP+ + LP +P +P+ E Q RKD RNEC+FTIDP A+DLDDALS + ++ VHIADVS+FV S LD MAS+R+T+VYL QKV+PMLPR L E++CSL P DRLTFSV W + G IL EW G+S+I SC L ++HAQ++++HPDK NE P Sbjct: 266 ETEGILMEYGVDFSDFPKKVLQCLPQNLPWSIPQEEFQKRKDLRNECIFTIDPATARDLDDALSCKSLPDGNFEVGVHIADVSYFVAEGSALDSMASERATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTFSVIWKITPQGKILDEWFGRSIICSCVKLSYDHAQNLINHPDKMFEKNELP 448
BLAST of exosome complex exonuclease vs. nr
Match: gi|1069361584|ref|XP_018121095.1| (PREDICTED: DIS3-like exonuclease 2 isoform X3 [Xenopus laevis]) HSP 1 Score: 205.297 bits (521), Expect = 4.843e-53 Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALPA-IPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAP 185 ++E IL E +D S+FP + LP +P +P+ E Q RKD RNEC+FTIDP A+DLDDALS P+ ++ VHIADVS+FV + LD MAS+R+T+VYL QKV+PMLPR L E++CSL P DRLTFSV W + G IL EW G+S+I SC L ++HAQ+M++HPDK + +E P Sbjct: 487 ETEGILMEYGVDFSDFPNKVLQCLPQNLPWSIPQEEFQKRKDLRNECIFTIDPATARDLDDALSCKPLPDGNFEVGVHIADVSYFVAEGNALDCMASERATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTFSVIWKITPQGKILDEWFGRSIICSCVKLSYDHAQNMINHPDKKIEKHELP 669
BLAST of exosome complex exonuclease vs. nr
Match: gi|1248987261|ref|XP_022521231.1| (LOW QUALITY PROTEIN: DIS3-like exonuclease 2 [Astyanax mexicanus]) HSP 1 Score: 204.912 bits (520), Expect = 4.928e-53 Identity = 107/220 (48.64%), Postives = 143/220 (65.00%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALPA-IPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNE----APDLDKNEIQGKLRHCNEKMKAVASAQYQSTMVHL 218 ++EAIL E ++D SEF EA LP +P +P E+ R+D R EC+FTIDP A+DLDDALS +S ++ VHIADVS+FV+ + LD +AS+R+T+VYL QKV+PMLPR L E++CSL P DRLTFSV W L G IL+EW G+SVIRSC L ++HAQSM+ PDK S E +PD IQ + H + + + S ++Q + L Sbjct: 464 ETEAILTEYDVDFSEFEEAALACLPQNLPWSIPPEELAKRRDLRKECIFTIDPATARDLDDALSCRQLSDGNFEVGVHIADVSYFVEEGTALDSVASRRATSVYLVQKVIPMLPRLLCEELCSLNPQTDRLTFSVIWTLSPEGKILSEWFGRSVIRSCIKLSYDHAQSMIQSPDKHFSSEELPPCSPDHPVQLIQESVLHLHSLAQHLRSQRFQGGALRL 683
BLAST of exosome complex exonuclease vs. nr
Match: gi|1069361582|ref|XP_018121094.1| (PREDICTED: DIS3-like exonuclease 2 isoform X2 [Xenopus laevis]) HSP 1 Score: 205.297 bits (521), Expect = 4.964e-53 Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALPA-IPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAP 185 ++E IL E +D S+FP + LP +P +P+ E Q RKD RNEC+FTIDP A+DLDDALS P+ ++ VHIADVS+FV + LD MAS+R+T+VYL QKV+PMLPR L E++CSL P DRLTFSV W + G IL EW G+S+I SC L ++HAQ+M++HPDK + +E P Sbjct: 505 ETEGILMEYGVDFSDFPNKVLQCLPQNLPWSIPQEEFQKRKDLRNECIFTIDPATARDLDDALSCKPLPDGNFEVGVHIADVSYFVAEGNALDCMASERATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTFSVIWKITPQGKILDEWFGRSIICSCVKLSYDHAQNMINHPDKKIEKHELP 687
BLAST of exosome complex exonuclease vs. nr
Match: gi|1069361578|ref|XP_018121092.1| (PREDICTED: DIS3-like exonuclease 2 isoform X1 [Xenopus laevis] >gi|1069361580|ref|XP_018121093.1| PREDICTED: DIS3-like exonuclease 2 isoform X1 [Xenopus laevis] >gi|1050376293|gb|OCT78491.1| hypothetical protein XELAEV_18029588mg [Xenopus laevis]) HSP 1 Score: 205.297 bits (521), Expect = 6.037e-53 Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 0 Query: 4 KSEAILDELEIDSSEFPEAIEDALPA-IPLVLPESEIQARKDFRNECVFTIDPMAAQDLDDALSVIPMSGQCVKIAVHIADVSHFVKPLSVLDEMASKRSTTVYLEQKVVPMLPRTLGEDICSLKPAEDRLTFSVEWILDENGNILAEWMGKSVIRSCANLDHEHAQSMLDHPDKSVLSNEAP 185 ++E IL E +D S+FP + LP +P +P+ E Q RKD RNEC+FTIDP A+DLDDALS P+ ++ VHIADVS+FV + LD MAS+R+T+VYL QKV+PMLPR L E++CSL P DRLTFSV W + G IL EW G+S+I SC L ++HAQ+M++HPDK + +E P Sbjct: 539 ETEGILMEYGVDFSDFPNKVLQCLPQNLPWSIPQEEFQKRKDLRNECIFTIDPATARDLDDALSCKPLPDGNFEVGVHIADVSYFVAEGNALDCMASERATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTFSVIWKITPQGKILDEWFGRSIICSCVKLSYDHAQNMINHPDKKIEKHELP 721 The following BLAST results are available for this feature:
BLAST of exosome complex exonuclease vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 8
BLAST of exosome complex exonuclease vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of exosome complex exonuclease vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold604_size126151:56285..74736- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold604_size126151-snap-gene-0.31 ID=maker-scaffold604_size126151-snap-gene-0.31|Name=exosome complex exonuclease|organism=Tigriopus kingsejongensis|type=gene|length=18452bp|location=Sequence derived from alignment at scaffold604_size126151:56285..74736- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'exosome complex exonuclease' has the following synonyms
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